Cla97C08G161810 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C08G161810
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Nucleic acid-binding, OB-fold-like protein
Location	Cla97Chr08 : 28155863 .. 28158506 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAATCAAAACCAGGACTAAGGAAACCAGTATTTACCAAGGTTGACCAACTTCGGCCGGGCACTAGTGGCCATACTCTTACAGTCAAGGTTGTGAATACGAAGATGGTATTGCAGAAGGGTCGTCCTGATGGCCCTCAAGCTCGTCAGATGCGAATTGCTGAATGCCTAGTGGGTGATGAGACTGGAATGATCATATTTACTGCCAGAAATGATCAAGGTAAATTTCAACAATATTTGAGGAGCCTGCACCATTTGTGTATTATTTGTATCTTGTATGAAGCATGCCAACTTTCTTCTTTATGCTTACATTCTGTATGTAATACTGAACATTTGACGTTAACTGGTTCTATATATCCACCCGCAACAGAAAAGGTTCAGGCAAGGGTTTTCATAATTGATTTATGGCATGTGAGCCATCATGGGTTGGCCTAGTGGTAAAAAGGGAGATATAGTCTCAATAAATCGCTACCTACCTAGGAATTTATATTCTATGAGTTTCCTTGACACAAAAACATTGTAGGTTCAGGTGGGCTGTCCCGTAAGATTAGTTGAGGTGTGCGTAAGCTAGCGGATATATATTTAGAAAAAATGATTTATGGCATGTGTCTCACTTTTTTTCCACAATGTATTTACATATTTCACTGTAAAAGGTACAGGTTGTTTTGATATATTAACTTACTTCTAGTAAATATTTCATAAAGGTTTGAGTCTTTACTTAAAATTAGTCGTGGACCTTTTCTTTTCAGACAAGAAACTAGATTTTTTTTTCCCTAAATGCTGGCATGTACGGAGGGTGAAATACAAAGCCAATTGAAATAAGTCATCCATATAAAAACTACCTTCTAAAGAACTGAGTACATACTTTGTCGGTTATATTTATATTAGTTAGTGTAATGGCTAATAGTTGGATAATCACTTCAATAGCTCTATTACACGCCGATGTTGGATTAATGTACATGCCATACATTTGAAAGGATAAGCTCTTTGCTGAATCTTGAGAATAATAGATTTTGAAGGGAGTCTTTATTATTTTGATTACGATTTTATGAGGGAAATTGGTTCTAGAAGGTCCATCAATTGCAGTTAATGTTGTTTCTATCACAGTCACGGCTTATTTTATCTGTTGGTTACATGTGTTTTTTTCAATGTTAGGATCTGATTACTTATGCATGTCACTGAGTGTTCATTGTTCTCAATACTGTATGTTAATTGTATTCTAAGCACGTGTTGATGCTTTAGTGATCAAAGGATCTTAGGCTATGTTATTGTTTGAGGGAATAAGAAACTGAAAATTAATTGTCAAAAATATTTAAAAATCATCTAGTTACTGAGACCTTCATGAAGCCAGCAATTTTGAGTTCTTGATTTTGGAGGAACTGCCAGCACCTAGGAATCTAGACAGCTCCACCTAGAAATAGATGTTTTGTGATTGTTGTGTTTGTTTTGCATCTTTTGATGTCTATCATATGCACTTAAATTAAAGCTCCTTTCAATTATTCACTTGCTATCCGTTTATTGTTAATTAGTTATATTAACTAACCTTATCACTTTTTCATATATAGGTTCCTTTCGATCATTCCTTGCTATGTTCTAAAACTTATTTTATTATAATATTTATTACCTCATTTAAATTGTATTAATTTGAGATTTTCTTATCATGTGTTAATTTATCATTTTCTATCATCTTTTTATGACATGACGTTAATTCACAAAAATAACATCATTAAGATTATTATTTTCCTAGAATTATTTAAATGAAATAGTTTATTTTTGTCTATTGGAGAGATCCTTCTCGAATTAAGGAGAAGATTGCTATACTTATTGCGGAACTGTTGAAAATGATGAAGAATAAGAATAAAAGAAACTGTTTTTGGTTATTTTGTTCCTTCCTCCTGAACAAGAATAGATAGAAGTTGTGAATTGTTGAATGGGAAAGTGGTTAACAGCACCGTAACTTTGTAGTTGGAGTTGCAAAGAAAACTGTTCCTCCTACATCGGCAGATGAAAGAGGTGGACAAGAATGGAATTTTGTGCAAGCTAGGTTCATGGTTTGGCGGAGGGGAATATGTGGTGCTGGGGAATGGGATAGTTATATATAGATGATATTTGTTGATGATCAAACTCTTTATTGTTGACTATATCCGTGTTTGACTTTTACCTATACCTTATCTTTGTTCATGAGATTAGTAAATTATGCCATCTGGAATTCACTTTAACGGTCAGGAAAATTTTATTAGTTCATTGTACACGATTTTAATTCCAACTGACCCCTAACCTGTTTGATTAACCAGTCCTTAGAGTAGAATTGATTTCAATTTTGAATCTGTCCTTGTAGCCACAGTTTTATTTGTTTACTTGAATGAGTACGTCTTTTGGTGGACATATTTAAGTGGCATTAAAGTTTCCGTAACTCATTTACTCGTATGTCTTTGCTGTCTTCCGTGTAGTGGATTTGATGAAAGAAGGTGCTACTATAACCCTGCGCAATGCTAAGATAGACATGTTTAAAGGATCAATGAGACTTGCTGTGGACAGGTGGGGCCGAGTTGAAGTTACTGAGCCTGCCACTTTCACTGTTAAGGAAGATAACAATCTTTCACTCATTGAATATGAACTCGTGAATGTCGTGGAAGAGTGA

mRNA sequence

ATGGCAGAATCAAAACCAGGACTAAGGAAACCAGTATTTACCAAGGTTGACCAACTTCGGCCGGGCACTAGTGGCCATACTCTTACAGTCAAGGTTGTGAATACGAAGATGGTATTGCAGAAGGGTCGTCCTGATGGCCCTCAAGCTCGTCAGATGCGAATTGCTGAATGCCTAGTGGGTGATGAGACTGGAATGATCATATTTACTGCCAGAAATGATCAAGTGGATTTGATGAAAGAAGGTGCTACTATAACCCTGCGCAATGCTAAGATAGACATGTTTAAAGGATCAATGAGACTTGCTGTGGACAGGTGGGGCCGAGTTGAAGTTACTGAGCCTGCCACTTTCACTGTTAAGGAAGATAACAATCTTTCACTCATTGAATATGAACTCGTGAATGTCGTGGAAGAGTGA

Coding sequence (CDS)

ATGGCAGAATCAAAACCAGGACTAAGGAAACCAGTATTTACCAAGGTTGACCAACTTCGGCCGGGCACTAGTGGCCATACTCTTACAGTCAAGGTTGTGAATACGAAGATGGTATTGCAGAAGGGTCGTCCTGATGGCCCTCAAGCTCGTCAGATGCGAATTGCTGAATGCCTAGTGGGTGATGAGACTGGAATGATCATATTTACTGCCAGAAATGATCAAGTGGATTTGATGAAAGAAGGTGCTACTATAACCCTGCGCAATGCTAAGATAGACATGTTTAAAGGATCAATGAGACTTGCTGTGGACAGGTGGGGCCGAGTTGAAGTTACTGAGCCTGCCACTTTCACTGTTAAGGAAGATAACAATCTTTCACTCATTGAATATGAACTCGTGAATGTCGTGGAAGAGTGA

Protein sequence

MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKEDNNLSLIEYELVNVVEE

Homology

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BLAST of Cla97C08G161810 vs. NCBI nr
Match: XP_004142984.1 (PREDICTED: uncharacterized protein At4g28440 [Cucumis sativus] >XP_008444318.1 PREDICTED: uncharacterized protein At4g28440 isoform X1 [Cucumis melo] >XP_008444319.1 PREDICTED: uncharacterized protein At4g28440 isoform X1 [Cucumis melo] >XP_011649474.1 PREDICTED: uncharacterized protein At4g28440 [Cucumis sativus] >KGN62287.1 hypothetical protein Csa_2G348250 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 2.6e-69
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPA FTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPANFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           DNNLSLIEYELVNVVEE
Sbjct: 121 DNNLSLIEYELVNVVEE 137

[Close]

BLAST of Cla97C08G161810 vs. NCBI nr
Match: XP_022951207.1 (uncharacterized protein At4g28440-like [Cucurbita moschata] >XP_023001948.1 uncharacterized protein At4g28440-like [Cucurbita maxima] >XP_023538137.1 uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo] >XP_023538138.1 uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 267.3 bits (682), Expect = 2.8e-68
Identity = 134/137 (97.81%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEGATI LRNAKIDMFKGSMRLAVDRWGRVEVTEPA+FTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRLAVDRWGRVEVTEPASFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           +NNLSLIEYELVNVVEE
Sbjct: 121 ENNLSLIEYELVNVVEE 137

[Close]

BLAST of Cla97C08G161810 vs. NCBI nr
Match: XP_022131585.1 (uncharacterized protein At4g28440-like [Momordica charantia])

HSP 1 Score: 266.5 bits (680), Expect = 4.9e-68
Identity = 133/137 (97.08%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQ RQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVD+MKEGATI LRNAKIDMFKGSMRLAVDRWGRVEVTEPA+FTVKE
Sbjct: 61  DETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRLAVDRWGRVEVTEPASFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           DNNLSLIEYELVNVVEE
Sbjct: 121 DNNLSLIEYELVNVVEE 137

[Close]

BLAST of Cla97C08G161810 vs. NCBI nr
Match: XP_022961781.1 (uncharacterized protein At4g28440-like [Cucurbita moschata] >XP_022961782.1 uncharacterized protein At4g28440-like [Cucurbita moschata] >XP_023545751.1 uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.5 bits (680), Expect = 4.9e-68
Identity = 134/137 (97.81%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTKVDQLRPGTSGHTL VKVVN KMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLIVKVVNAKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPA FTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPAAFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           DNNLSLIEYELVNVVEE
Sbjct: 121 DNNLSLIEYELVNVVEE 137

[Close]

BLAST of Cla97C08G161810 vs. NCBI nr
Match: XP_022996548.1 (uncharacterized protein At4g28440-like [Cucurbita maxima] >XP_022996550.1 uncharacterized protein At4g28440-like [Cucurbita maxima])

HSP 1 Score: 265.4 bits (677), Expect = 1.1e-67
Identity = 133/137 (97.08%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTKVDQLRPGTSGHTL VKVVN KMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLIVKVVNAKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPA FTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPAAFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           DNNLSLIEYELVNV+EE
Sbjct: 121 DNNLSLIEYELVNVMEE 137

[Close]

BLAST of Cla97C08G161810 vs. TrEMBL
Match: tr|A0A1S3BA24|A0A1S3BA24_CUCME (uncharacterized protein At4g28440 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487687 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.7e-69
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPA FTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPANFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           DNNLSLIEYELVNVVEE
Sbjct: 121 DNNLSLIEYELVNVVEE 137

[Close]

BLAST of Cla97C08G161810 vs. TrEMBL
Match: tr|A0A0A0LNA1|A0A0A0LNA1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348250 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.7e-69
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPA FTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPANFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           DNNLSLIEYELVNVVEE
Sbjct: 121 DNNLSLIEYELVNVVEE 137

[Close]

BLAST of Cla97C08G161810 vs. TrEMBL
Match: tr|A0A151TGI4|A0A151TGI4_CAJCA (Uncharacterized protein At4g28440 family OS=Cajanus cajan OX=3821 GN=KK1_012448 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.9e-66
Identity = 128/137 (93.43%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MA+SKPGLRKPVFTKVDQLRPGTSGHTLTVKVVN KMV+QKGRPDGPQ+RQMRIAECLVG
Sbjct: 1   MADSKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRPDGPQSRQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEGAT+ LRNAKIDMFKGSMRLAVD+WGRVEVTEPA+FTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           DNNLSLIEYELVNVV E
Sbjct: 121 DNNLSLIEYELVNVVVE 137

[Close]

BLAST of Cla97C08G161810 vs. TrEMBL
Match: tr|A0A151TGI6|A0A151TGI6_CAJCA (Uncharacterized protein At4g28440 family OS=Cajanus cajan OX=3821 GN=KK1_012449 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 5.1e-66
Identity = 127/137 (92.70%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MA+SKPGLRKPVFTKVDQLRPGTSGHTLTVKVVN KMV+QKGRPDGPQ+RQMRIAECLVG
Sbjct: 1   MADSKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRPDGPQSRQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGM+IFTARNDQVDLMKEGAT+ LRNAKIDMFKGSMRLAVD+WGRVEVTEPA+FTVKE
Sbjct: 61  DETGMVIFTARNDQVDLMKEGATVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           DNNLSLIEYELVNVV E
Sbjct: 121 DNNLSLIEYELVNVVVE 137

[Close]

BLAST of Cla97C08G161810 vs. TrEMBL
Match: tr|A0A2C9UT31|A0A2C9UT31_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G028600 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.5e-65
Identity = 129/137 (94.16%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESK GLRKPVFTKVDQLRPGTSGHTLTVKVV+ KMVLQKGRPDGPQ RQMRIAECLVG
Sbjct: 1   MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSAKMVLQKGRPDGPQIRQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEG+TI LRNAKIDMFKGSMRLAVD+WGRVEVTEPA+FTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           DNNLSLIEYELVNVVEE
Sbjct: 121 DNNLSLIEYELVNVVEE 137

[Close]

BLAST of Cla97C08G161810 vs. Swiss-Prot
Match: sp|O49453|Y4844_ARATH (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana OX=3702 GN=At4g28440 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.4e-44
Identity = 88/132 (66.67%), Postives = 107/132 (81.06%), Query Frame = 0


Query: 9   RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQAR---QMRIAECLVGDE 68
           RKPVF KV+QL+PGT+GHTLTVKV+   +V+   +K RP    +R     RI ECL+GDE
Sbjct: 18  RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDE 77

Query: 69  TGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKEDN 128
           TG I+FTARNDQVDLMK GAT+ LRN++IDMFKG+MRL VD+WGR+E T  A+FTVKEDN
Sbjct: 78  TGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDN 137

Query: 129 NLSLIEYELVNV 135
           NLSL+EYEL+NV
Sbjct: 138 NLSLVEYELINV 149

[Close]

BLAST of Cla97C08G161810 vs. TAIR10
Match: AT1G23750.1 (Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 233.0 bits (593), Expect = 1.1e-61
Identity = 113/137 (82.48%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MAES-KPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLV 60
           MA+S K GL+KP FTKVDQLRPGTSGH + VK+V+TKMVLQKGR DGPQARQ+RI+EC+V
Sbjct: 1   MADSTKAGLKKPAFTKVDQLRPGTSGHNVNVKIVSTKMVLQKGRADGPQARQLRISECIV 60

Query: 61  GDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVK 120
           GDETG+I+FTARNDQVDLMKEG+T+TLRNAKIDM+KGSMRLAVD+WGRVEVTEPA+F VK
Sbjct: 61  GDETGVIVFTARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVK 120

Query: 121 EDNNLSLIEYELVNVVE 137
           ED N+SLIEYELVNVVE
Sbjct: 121 EDTNMSLIEYELVNVVE 137

[Close]

BLAST of Cla97C08G161810 vs. TAIR10
Match: AT1G10590.3 (Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 216.9 bits (551), Expect = 8.0e-57
Identity = 109/137 (79.56%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECL 60
           MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECL
Sbjct: 15  MAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECL 74

Query: 61  VGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVT-EPATFT 120
           VGDETG+IIFTARNDQVD+MKEG+ +TLRNAKIDM+KGSMRLAVDRWGRVEV  EP   T
Sbjct: 75  VGDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDIT 134

Query: 121 VKEDNNLSLIEYELVNV 135
           VK+DNNLSLIEYELV+V
Sbjct: 135 VKDDNNLSLIEYELVSV 151

[Close]

BLAST of Cla97C08G161810 vs. TAIR10
Match: AT2G33845.1 (Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 192.2 bits (487), Expect = 2.1e-49
Identity = 97/128 (75.78%), Postives = 106/128 (82.81%), Query Frame = 0


Query: 11  PVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK-GRPDGPQARQMRIAECLVGDETGMIIFT 70
           PVF KVDQL+PGTSGHTLTVKVV+   V QK G       R  RI+ECLVGDET  I+FT
Sbjct: 55  PVFVKVDQLKPGTSGHTLTVKVVDQNSVPQKPGAASSSHLRPARISECLVGDETACILFT 114

Query: 71  ARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKEDNNLSLIEY 130
           ARNDQV+LMK GAT+ LRNAKIDMFKGSMRLAVD+WGR+E TEPA  TVKEDNNLSL+EY
Sbjct: 115 ARNDQVELMKPGATVNLRNAKIDMFKGSMRLAVDKWGRIEATEPADITVKEDNNLSLVEY 174

Query: 131 ELVNVVEE 138
           ELVNVVEE
Sbjct: 175 ELVNVVEE 182

[Close]

BLAST of Cla97C08G161810 vs. TAIR10
Match: AT4G28440.1 (Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 178.7 bits (452), Expect = 2.4e-45
Identity = 88/132 (66.67%), Postives = 107/132 (81.06%), Query Frame = 0


Query: 9   RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQAR---QMRIAECLVGDE 68
           RKPVF KV+QL+PGT+GHTLTVKV+   +V+   +K RP    +R     RI ECL+GDE
Sbjct: 18  RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDE 77

Query: 69  TGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKEDN 128
           TG I+FTARNDQVDLMK GAT+ LRN++IDMFKG+MRL VD+WGR+E T  A+FTVKEDN
Sbjct: 78  TGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDN 137

Query: 129 NLSLIEYELVNV 135
           NLSL+EYEL+NV
Sbjct: 138 NLSLVEYELINV 149

[Close]

BLAST of Cla97C08G161810 vs. TAIR10
Match: AT1G03810.1 (Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 164.9 bits (416), Expect = 3.6e-41
Identity = 80/127 (62.99%), Postives = 98/127 (77.17%), Query Frame = 0


Query: 9   RKPVFTKVDQLRPGTSGHTLTVKVVNT---KMVLQKGRPDGPQARQMRIAECLVGDETGM 68
           RKPVF KVDQL+PGTSGHTL VKV+ +   K  ++K           RIAECL+GD+TG 
Sbjct: 15  RKPVFVKVDQLKPGTSGHTLIVKVLESNPVKPAIRKSSLTQQPISSPRIAECLIGDDTGC 74

Query: 69  IIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKEDNNLS 128
           I+FTARNDQVDLMK GAT+ LRNAKID+FK +MR+AVDRWGR+E+T P +F V   NNLS
Sbjct: 75  ILFTARNDQVDLMKTGATVILRNAKIDLFKDTMRMAVDRWGRIEITGPVSFEVNRANNLS 134

Query: 129 LIEYELV 133
           L+EYE++
Sbjct: 135 LVEYEVI 141

The following BLAST results are available for this feature:

BLAST of Cla97C08G161810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142984.1	2.6e-69	99.27	PREDICTED: uncharacterized protein At4g28440 [Cucumis sativus] >XP_008444318.1 P...	[more]
XP_022951207.1	2.8e-68	97.81	uncharacterized protein At4g28440-like [Cucurbita moschata] >XP_023001948.1 unch...	[more]
XP_022131585.1	4.9e-68	97.08	uncharacterized protein At4g28440-like [Momordica charantia]	[more]
XP_022961781.1	4.9e-68	97.81	uncharacterized protein At4g28440-like [Cucurbita moschata] >XP_022961782.1 unch...	[more]
XP_022996548.1	1.1e-67	97.08	uncharacterized protein At4g28440-like [Cucurbita maxima] >XP_022996550.1 unchar...	[more]

BLAST of Cla97C08G161810 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BA24\|A0A1S3BA24_CUCME	1.7e-69	99.27	uncharacterized protein At4g28440 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
tr\|A0A0A0LNA1\|A0A0A0LNA1_CUCSA	1.7e-69	99.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348250 PE=4 SV=1	[more]
tr\|A0A151TGI4\|A0A151TGI4_CAJCA	3.9e-66	93.43	Uncharacterized protein At4g28440 family OS=Cajanus cajan OX=3821 GN=KK1_012448 ...	[more]
tr\|A0A151TGI6\|A0A151TGI6_CAJCA	5.1e-66	92.70	Uncharacterized protein At4g28440 family OS=Cajanus cajan OX=3821 GN=KK1_012449 ...	[more]
tr\|A0A2C9UT31\|A0A2C9UT31_MANES	1.5e-65	94.16	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G028600 PE=4 SV=...	[more]

BLAST of Cla97C08G161810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O49453\|Y4844_ARATH	4.4e-44	66.67	Uncharacterized protein At4g28440 OS=Arabidopsis thaliana OX=3702 GN=At4g28440 P...	[more]

BLAST of Cla97C08G161810 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G23750.1	1.1e-61	82.48	Nucleic acid-binding, OB-fold-like protein	[more]
AT1G10590.3	8.0e-57	79.56	Nucleic acid-binding, OB-fold-like protein	[more]
AT2G33845.1	2.1e-49	75.78	Nucleic acid-binding, OB-fold-like protein	[more]
AT4G28440.1	2.4e-45	66.67	Nucleic acid-binding, OB-fold-like protein	[more]
AT1G03810.1	3.6e-41	62.99	Nucleic acid-binding, OB-fold-like protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012340	NA-bd_OB-fold

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003729	mRNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C08G161810.1	Cla97C08G161810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:2.40.50.140		coord: 23..126 e-value: 7.3E-39 score: 134.1
None	No IPR available	PANTHER	PTHR31472:SF1	EXPRESSED PROTEIN-RELATED	coord: 2..137
None	No IPR available	PANTHER	PTHR31472	FAMILY NOT NAMED	coord: 2..137
None	No IPR available	CDD	cd04491	SoSSB_OBF	coord: 27..110 e-value: 4.13417E-16 score: 68.0333
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	SSF50249	Nucleic acid-binding proteins	coord: 6..134

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C08G161810	Cla000797	Watermelon (97103) v1	wmwmbB005
Cla97C08G161810	Csa2G348250	Cucumber (Chinese Long) v2	cuwmbB163
Cla97C08G161810	MELO3C010663	Melon (DHL92) v3.5.1	mewmbB302
Cla97C08G161810	ClCG08G018040	Watermelon (Charleston Gray)	wcgwmbB336
Cla97C08G161810	CSPI02G17000	Wild cucumber (PI 183967)	cpiwmbB166
Cla97C08G161810	Cucsa.394190	Cucumber (Gy14) v1	cgywmbB676
Cla97C08G161810	CmaCh05G000100	Cucurbita maxima (Rimu)	cmawmbB832
Cla97C08G161810	CmaCh12G000060	Cucurbita maxima (Rimu)	cmawmbB198
Cla97C08G161810	CmoCh12G000060	Cucurbita moschata (Rifu)	cmowmbB181
Cla97C08G161810	CmoCh05G000110	Cucurbita moschata (Rifu)	cmowmbB802
Cla97C08G161810	Lsi08G016820	Bottle gourd (USVL1VR-Ls)	lsiwmbB444
Cla97C08G161810	CsGy2G016990	Cucumber (Gy14) v2	cgybwmbB156
Cla97C08G161810	MELO3C010663.2	Melon (DHL92) v3.6.1	medwmbB289
Cla97C08G161810	Carg21808	Silver-seed gourd	carwmbB0528
Cla97C08G161810	Carg20514	Silver-seed gourd	carwmbB0650
Cla97C08G161810	CsaV3_2G024610	Cucumber (Chinese Long) v3	cucwmbB164
Cla97C08G161810	Bhi04G000524	Wax gourd	wgowmbB333

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C08G161810	Wax gourd	wgowmbB045