Cla97C06G110690 (gene) Watermelon (97103) v2

Overview
NameCla97C06G110690
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionTransmembrane protein, putative
LocationCla97Chr06 : 1369109 .. 1369471 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCGAGAAGCAAGGACAAGGCATTCGAGCGGGTGAGGTTGGAAGGTGGAAACATAGGAGCCTCAATGTCAGTGAGCCATGGAGGAGAAGGTAAATTACACAACTGTTGTTGCATAAACATTTATGTAAACAGCAACATTCAAGGTGTGAACAATTCAACATTGAATGGGAGTGAGGTCAAAATGGGAAGCCCAGGAGTTTTCTTCTTCTTTGGAGATATGGAACCAAAATCACATCAAAATAACACTTCATCACTTCATCAAATTCCCAAGCTATGGCAATGGAGTTTAATGCTTCTTCTTCTTCTTCTTCTACTCCTCTTTCTGTTACTTCTAGAAATGAAAATGCTTCATTCTTAA

mRNA sequence

ATGGAGGCGAGAAGCAAGGACAAGGCATTCGAGCGGGTGAGGTTGGAAGGTGGAAACATAGGAGCCTCAATGTCAGTGAGCCATGGAGGAGAAGGTAAATTACACAACTGTTGTTGCATAAACATTTATGTAAACAGCAACATTCAAGGTGTGAACAATTCAACATTGAATGGGAGTGAGGTCAAAATGGGAAGCCCAGGAGTTTTCTTCTTCTTTGGAGATATGGAACCAAAATCACATCAAAATAACACTTCATCACTTCATCAAATTCCCAAGCTATGGCAATGGAGTTTAATGCTTCTTCTTCTTCTTCTTCTACTCCTCTTTCTGTTACTTCTAGAAATGAAAATGCTTCATTCTTAA

Coding sequence (CDS)

ATGGAGGCGAGAAGCAAGGACAAGGCATTCGAGCGGGTGAGGTTGGAAGGTGGAAACATAGGAGCCTCAATGTCAGTGAGCCATGGAGGAGAAGGTAAATTACACAACTGTTGTTGCATAAACATTTATGTAAACAGCAACATTCAAGGTGTGAACAATTCAACATTGAATGGGAGTGAGGTCAAAATGGGAAGCCCAGGAGTTTTCTTCTTCTTTGGAGATATGGAACCAAAATCACATCAAAATAACACTTCATCACTTCATCAAATTCCCAAGCTATGGCAATGGAGTTTAATGCTTCTTCTTCTTCTTCTTCTACTCCTCTTTCTGTTACTTCTAGAAATGAAAATGCTTCATTCTTAA

Protein sequence

MEARSKDKAFERVRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSEVKMGSPGVFFFFGDMEPKSHQNNTSSLHQIPKLWQWSLMLLLLLLLLLFLLLLEMKMLHS
Homology
[Close]
BLAST of Cla97C06G110690 vs. NCBI nr
Match: KGN46369.1 (hypothetical protein Csa_6G087970 [Cucumis sativus])

HSP 1 Score: 169.1 bits (427), Expect = 9.2e-39
Identity = 81/95 (85.26%), Postives = 85/95 (89.47%), Query Frame = 0 

Query: 1  MEARSKDKAFERVRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSE 60
          MEAR +++A E VRLEGGN+GASMSVSHGGE KL NCCCINIYVNSNIQGVNNSTLNG E
Sbjct: 1  MEARDENEALEGVRLEGGNMGASMSVSHGGECKLPNCCCINIYVNSNIQGVNNSTLNGGE 60

Query: 61 VKMGSPGVFFFFGDMEPKSHQNNTSSLHQIPKLWQ 96
          VKMGSPGVFF FGDMEPK HQN TSSLHQ PKLWQ
Sbjct: 61 VKMGSPGVFFLFGDMEPKLHQNKTSSLHQNPKLWQ 95

[Close]
BLAST of Cla97C06G110690 vs. NCBI nr
Match: PON31494.1 (Transmembrane protein [Trema orientalis])

HSP 1 Score: 92.4 bits (228), Expect = 1.1e-15
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0 

Query: 1  MEARSKDKAFERVRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSE 60
          M   +  ++FER+ LEG N GAS S+  G   + H+CCCINIY+N+N+QG NNS L GSE
Sbjct: 1  MAPEASPESFERINLEGKNSGASFSLHRGDRSESHDCCCINIYINNNVQGANNSVLYGSE 60

Query: 61 VKMGSPGVFFFFGDME 77
          V+M  PGV  FFGD++
Sbjct: 61 VQMRDPGVHLFFGDVK 76

[Close]
BLAST of Cla97C06G110690 vs. NCBI nr
Match: XP_018827175.1 (PREDICTED: uncharacterized protein LOC108995952 [Juglans regia])

HSP 1 Score: 89.0 bits (219), Expect = 1.2e-14
Identity = 42/69 (60.87%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 9  AFERVRLEGGNIGASMSV-SHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSEVKMGSPG 68
          +FERV L+G NIGA+M V S    G+ H+CCCINIY+N+NIQG+NNS L+GSEVK+  PG
Sbjct: 9  SFERVNLKGRNIGAAMFVPSSDTRGESHDCCCINIYINNNIQGINNSILHGSEVKLRDPG 68

Query: 69 VFFFFGDME 77
          V  FFG+++
Sbjct: 69 VSLFFGEVK 77

[Close]
BLAST of Cla97C06G110690 vs. NCBI nr
Match: EOX94306.1 (Uncharacterized protein TCM_003895 [Theobroma cacao])

HSP 1 Score: 85.9 bits (211), Expect = 1.0e-13
Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = 0 

Query: 9  AFERVRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSEVKMGSPGV 68
          +F RV LEG N GA+M +  G  G+   CCCINIY NSNIQG NNS L GS +KM +PGV
Sbjct: 13 SFNRVNLEGSNAGATMFIRRGTAGEPEGCCCINIYTNSNIQGANNSLLLGSNIKMKNPGV 72

Query: 69 FFFFGDM 76
            +FGD+
Sbjct: 73 HLYFGDL 79

[Close]
BLAST of Cla97C06G110690 vs. NCBI nr
Match: OIT32477.1 (hypothetical protein A4A49_16148 [Nicotiana attenuata])

HSP 1 Score: 84.7 bits (208), Expect = 2.3e-13
Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 0 

Query: 9  AFERVRLEGGNIGASMSVSHGG-EGKLHNCCCINIYVNSNIQGVNNSTLNGSEVKMGSPG 68
          +FE V+LEG N+GA+M    GG  G+ H CCCINIY+++NIQG+NNS L GS+VKMG PG
Sbjct: 7  SFEHVKLEGRNVGATMVARRGGCAGESHGCCCINIYISNNIQGLNNSILVGSKVKMGDPG 66

Query: 69 VFFFFGDME 77
          V F   D++
Sbjct: 67 VCFSMKDVK 75

[Close]
BLAST of Cla97C06G110690 vs. TrEMBL
Match: tr|A0A0A0KBZ5|A0A0A0KBZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087970 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 6.1e-39
Identity = 81/95 (85.26%), Postives = 85/95 (89.47%), Query Frame = 0 

Query: 1  MEARSKDKAFERVRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSE 60
          MEAR +++A E VRLEGGN+GASMSVSHGGE KL NCCCINIYVNSNIQGVNNSTLNG E
Sbjct: 1  MEARDENEALEGVRLEGGNMGASMSVSHGGECKLPNCCCINIYVNSNIQGVNNSTLNGGE 60

Query: 61 VKMGSPGVFFFFGDMEPKSHQNNTSSLHQIPKLWQ 96
          VKMGSPGVFF FGDMEPK HQN TSSLHQ PKLWQ
Sbjct: 61 VKMGSPGVFFLFGDMEPKLHQNKTSSLHQNPKLWQ 95

[Close]
BLAST of Cla97C06G110690 vs. TrEMBL
Match: tr|A0A2P5A4P7|A0A2P5A4P7_9ROSA (Transmembrane protein OS=Trema orientalis OX=63057 GN=TorRG33x02_357670 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.3e-16
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0 

Query: 1  MEARSKDKAFERVRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSE 60
          M   +  ++FER+ LEG N GAS S+  G   + H+CCCINIY+N+N+QG NNS L GSE
Sbjct: 1  MAPEASPESFERINLEGKNSGASFSLHRGDRSESHDCCCINIYINNNVQGANNSVLYGSE 60

Query: 61 VKMGSPGVFFFFGDME 77
          V+M  PGV  FFGD++
Sbjct: 61 VQMRDPGVHLFFGDVK 76

[Close]
BLAST of Cla97C06G110690 vs. TrEMBL
Match: tr|A0A2I4F698|A0A2I4F698_9ROSI (uncharacterized protein LOC108995952 OS=Juglans regia OX=51240 GN=LOC108995952 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 8.0e-15
Identity = 42/69 (60.87%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 9  AFERVRLEGGNIGASMSV-SHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSEVKMGSPG 68
          +FERV L+G NIGA+M V S    G+ H+CCCINIY+N+NIQG+NNS L+GSEVK+  PG
Sbjct: 9  SFERVNLKGRNIGAAMFVPSSDTRGESHDCCCINIYINNNIQGINNSILHGSEVKLRDPG 68

Query: 69 VFFFFGDME 77
          V  FFG+++
Sbjct: 69 VSLFFGEVK 77

[Close]
BLAST of Cla97C06G110690 vs. TrEMBL
Match: tr|M1AG80|M1AG80_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 8.0e-15
Identity = 46/87 (52.87%), Postives = 58/87 (66.67%), Query Frame = 0 

Query: 1  MEARSKDKAFERVRLEGGNIGASMSVSHGG-EGKLHNCCCINIYVNSNIQGVNNSTLNGS 60
          M   ++   FE V+LEG N+GASM    GG  G+ H+CCCINIY+++NIQGVNNS L GS
Sbjct: 1  MSPENRHGQFEHVKLEGKNVGASMIARRGGCSGESHDCCCINIYISNNIQGVNNSILFGS 60

Query: 61 EVKMGSPGVFFFFGDMEPKSHQNNTSS 87
          +VKMG PGV F   D+  K H+    S
Sbjct: 61 KVKMGDPGVSFSMKDV--KLHRGKMGS 85

[Close]
BLAST of Cla97C06G110690 vs. TrEMBL
Match: tr|A0A061DQD8|A0A061DQD8_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_003895 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.8e-14
Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = 0 

Query: 9  AFERVRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSEVKMGSPGV 68
          +F RV LEG N GA+M +  G  G+   CCCINIY NSNIQG NNS L GS +KM +PGV
Sbjct: 13 SFNRVNLEGSNAGATMFIRRGTAGEPEGCCCINIYTNSNIQGANNSLLLGSNIKMKNPGV 72

Query: 69 FFFFGDM 76
            +FGD+
Sbjct: 73 HLYFGDL 79

[Close]
BLAST of Cla97C06G110690 vs. TAIR10
Match: AT2G20362.1 (unknown protein)

HSP 1 Score: 48.5 bits (114), Expect = 3.3e-06
Identity = 26/64 (40.62%), Postives = 35/64 (54.69%), Query Frame = 0 

Query: 13 VRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSEVKMGSPGVFFFF 72
          + L G N+GA M      +    + C INIYVNSN+Q    S L GS+VK+  PGV    
Sbjct: 17 INLNGRNVGAVMVAPRDVDIASQSGCRINIYVNSNVQATCGSALIGSKVKLRDPGVHLHI 76

Query: 73 GDME 77
           D++
Sbjct: 77 DDVK 80

[Close]
BLAST of Cla97C06G110690 vs. TAIR10
Match: AT1G63310.1 (unknown protein)

HSP 1 Score: 42.0 bits (97), Expect = 3.1e-04
Identity = 27/74 (36.49%), Postives = 39/74 (52.70%), Query Frame = 0 

Query: 13  VRLEGGNIGASMSV----SHGGEGKL--HNCCCINIYVNSNIQGVNNSTLNGSEVKMGSP 72
           + L G N+GA+M      +HG   +   H    ++ YVNSN Q VNNS + G++ +   P
Sbjct: 53  ITLSGSNLGATMKTELDNNHGDRDQNGDHELDFLSTYVNSNFQAVNNSIMIGAKYETHDP 112

Query: 73  GVFF-FFGDMEPKS 80
           GV     GD+E  S
Sbjct: 113 GVHLDISGDVEKPS 126

The following BLAST results are available for this feature:
BLAST of Cla97C06G110690 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46369.19.2e-3985.26hypothetical protein Csa_6G087970 [Cucumis sativus][more]
PON31494.11.1e-1553.95Transmembrane protein [Trema orientalis][more]
XP_018827175.11.2e-1460.87PREDICTED: uncharacterized protein LOC108995952 [Juglans regia][more]
EOX94306.11.0e-1358.21Uncharacterized protein TCM_003895 [Theobroma cacao][more]
OIT32477.12.3e-1357.97hypothetical protein A4A49_16148 [Nicotiana attenuata][more]
BLAST of Cla97C06G110690 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KBZ5|A0A0A0KBZ5_CUCSA6.1e-3985.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087970 PE=4 SV=1[more]
tr|A0A2P5A4P7|A0A2P5A4P7_9ROSA7.3e-1653.95Transmembrane protein OS=Trema orientalis OX=63057 GN=TorRG33x02_357670 PE=4 SV=... [more]
tr|A0A2I4F698|A0A2I4F698_9ROSI8.0e-1560.87uncharacterized protein LOC108995952 OS=Juglans regia OX=51240 GN=LOC108995952 P... [more]
tr|M1AG80|M1AG80_SOLTU8.0e-1552.87Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1[more]
tr|A0A061DQD8|A0A061DQD8_THECC6.8e-1458.21Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_003895 PE=4 SV=1[more]
BLAST of Cla97C06G110690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C06G110690 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G20362.13.3e-0640.63unknown protein[more]
AT1G63310.13.1e-0436.49unknown protein[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006810 transport
biological_process GO:0008152 metabolic process
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0016887 ATPase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G110690.1Cla97C06G110690.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33472:SF2SUBFAMILY NOT NAMEDcoord: 4..83
NoneNo IPR availablePANTHERPTHR33472FAMILY NOT NAMEDcoord: 4..83

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C06G110690Cla007061Watermelon (97103) v1wmwmbB407
Cla97C06G110690Csa6G087970Cucumber (Chinese Long) v2cuwmbB468
Cla97C06G110690ClCG06G001390Watermelon (Charleston Gray)wcgwmbB273
Cla97C06G110690CSPI06G06960Wild cucumber (PI 183967)cpiwmbB495
Cla97C06G110690Cucsa.348840Cucumber (Gy14) v1cgywmbB596
Cla97C06G110690CmaCh08G000450Cucurbita maxima (Rimu)cmawmbB922
Cla97C06G110690CsaV3_6G007330Cucumber (Chinese Long) v3cucwmbB487
Cla97C06G110690Bhi12G002082Wax gourdwgowmbB086
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C06G110690Silver-seed gourdcarwmbB0011
Cla97C06G110690Silver-seed gourdcarwmbB1032
Cla97C06G110690Cucumber (Gy14) v2cgybwmbB446
Cla97C06G110690Cucurbita maxima (Rimu)cmawmbB369
Cla97C06G110690Cucurbita moschata (Rifu)cmowmbB354
Cla97C06G110690Cucurbita moschata (Rifu)cmowmbB897
Cla97C06G110690Bottle gourd (USVL1VR-Ls)lsiwmbB026
Cla97C06G110690Melon (DHL92) v3.6.1medwmbB118
Cla97C06G110690Melon (DHL92) v3.5.1mewmbB127