Cla97C05G100770 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G100770
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	30S ribosomal protein S9, chloroplastic
Location	Cla97Chr05 : 29514286 .. 29516395 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTTCGATATCCTCTCTTGCATTCTCTCTATCTTCTCTCTCCTTTTCTTCCCAAGTATCACATAAGCCAAATGCCCTGTCCTTTCCCCGCTCAAAATCCCTTCTAATTTCCCATGCCTGCTCTACTTCCCCACTTGTAGTATCTGCCTCCGCCGCTGCCGGAGTGGAGACGGCGGACCTTAGGAGCTTCGTCAAATCCAGCCTCCCTGGTGGTTTCGCCGCGCAAACGCTGTTTGGCACTGGTCGCCGGAAATCTGCCGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTATCGCGACGCTAAGGTCCTCTATCTTTTCCCTTGTTCGCATACTTTCGTTTAGTTTAATCCATTTTGGTACTGGATTTTCTTTGAACGTTTTAGGGTTTTGTTTCTTTTGCTGAATTCGACTAGGTTCGTTTGATGGCAATGCACATGTTTTCTTGGATTAAACCAATGATTGTTGTTATATTTTCCTGATTACCGTCTTCTATATGAGATGGAACTGATTTTTTTTTTCTCCACTGTCTCTGTTGTTATCGATCTGCGACGTTTGTTATGTTGAATTGGAAATCAACTTGAGAAAAACATTCTTTACATTCTAGAATTAAATTCCAAGGCTTTTGCCTCTTCATCTAATACGATGAAATTAGATTACATTTGGAGGGACTGCGGAACAAGTGCTTTCATTGATCAGAAGTCGGGACAAAGGACTGATGCGACTGTATCTATGTCTTGTGCTTCTTTTAAGTTTGAGTTTGATCTTTCGGTGAAATGGTTCTAAATGCCAAAAGACATATCTATTTCGGTGATTGAGTCGTTCCCTCGTTCTTTCTTAGTGGGTGTGGGAGTGGAAATGTGCCCTTGTTCTTCCACTTACATCGCATATGCAAATCTTTAGCATCTGATGACGTTAAATCACATTGCTATTGCAAATCCTTCTTTTGCCACTTGCCGGTGTTCATCAACTCGCTACATATCAATTGACATAATGCTTCTGGAGATGGCACCATAATCTCAAGTCTTGTATGGTTATCTTATAACCTATATCTACGTCTGTTCTTTAATAGGGGATTAGCATACTGAACAACCACAGATTGAGAAAGCACTCAAGAGAGAGAATTGAAAAATACATCTGATACCATGTCGACCCTTGAGTGTAACTTAAACTTGCATCACTTTCCATTAAGAAAAATTAGCTATATAAATAGCCAGGTGATAGTACAAATTAAGTATACAACAGAATAACAAACTATCTAACAAACTAATTTTCTCTTGTAATATGTTAAGATGTTGGTTTCTCTCCATAAACAAGTGAATTTAGTATACAATTTCCCCCCTTTTTTCCAACTAGTGGGTGTGGGGAGATTCGAATTTCAAACCTTTTGTTTAAGTGTATATGCCTTTTGAGCTTTGTTCATAGTGAACAAATGTGTTTCATTTATTGTCAGGATGCTATTTCCCCTTAAATAGTTAAATGTTTATAAAGGTTTCTGGTATATCTTTTGTTGAGTACAACAAGTGGAGGTAGGAAGATTTAACTATTGTTGTGCTATGCTCACTATGACATGTTTTTGTGGTAGTGATGCTTGGATAGTCTCTTTTAAACTTGATGTGATGACACATTATTTGAAATAAGGAAAAGACTCACCCAATTTGTACTTGAACTTCTACTTATGTATCTAGGACGACTTGTTATACAAACTAATTCGTTTTATATAAATCTTTTAAGCTGGGAGGGTGTGTTCAGTAGAATTGTACTCACATCTATGTTGGAATACACTTTTTTTTTTTTTCAGGAATACCTTCAAGGAAATCCATTGTGGCTTCAATATGTGAAAGTTCCATTAGTAACATTGGGATATGAAAGTAGCTATGATGTATTCGTGAAAGCCGAAGGAGGTGGGCTCTCTGGCCAGGCTCAAGCAATTTCCCTCGGCATTGCTCGGGCTCTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACTCTAGAGTCGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCACGTAAAGCCCCACAATTCTCCAAGCGTTGA

mRNA sequence

ATGGCTACTTCGATATCCTCTCTTGCATTCTCTCTATCTTCTCTCTCCTTTTCTTCCCAAGTATCACATAAGCCAAATGCCCTGTCCTTTCCCCGCTCAAAATCCCTTCTAATTTCCCATGCCTGCTCTACTTCCCCACTTGTAGTATCTGCCTCCGCCGCTGCCGGAGTGGAGACGGCGGACCTTAGGAGCTTCGTCAAATCCAGCCTCCCTGGTGGTTTCGCCGCGCAAACGCTGTTTGGCACTGGTCGCCGGAAATCTGCCGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTATCGCGACGCTAAGGAATACCTTCAAGGAAATCCATTGTGGCTTCAATATGTGAAAGTTCCATTAGTAACATTGGGATATGAAAGTAGCTATGATGTATTCGTGAAAGCCGAAGGAGGTGGGCTCTCTGGCCAGGCTCAAGCAATTTCCCTCGGCATTGCTCGGGCTCTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACTCTAGAGTCGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCACGTAAAGCCCCACAATTCTCCAAGCGTTGA

Coding sequence (CDS)

ATGGCTACTTCGATATCCTCTCTTGCATTCTCTCTATCTTCTCTCTCCTTTTCTTCCCAAGTATCACATAAGCCAAATGCCCTGTCCTTTCCCCGCTCAAAATCCCTTCTAATTTCCCATGCCTGCTCTACTTCCCCACTTGTAGTATCTGCCTCCGCCGCTGCCGGAGTGGAGACGGCGGACCTTAGGAGCTTCGTCAAATCCAGCCTCCCTGGTGGTTTCGCCGCGCAAACGCTGTTTGGCACTGGTCGCCGGAAATCTGCCGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTATCGCGACGCTAAGGAATACCTTCAAGGAAATCCATTGTGGCTTCAATATGTGAAAGTTCCATTAGTAACATTGGGATATGAAAGTAGCTATGATGTATTCGTGAAAGCCGAAGGAGGTGGGCTCTCTGGCCAGGCTCAAGCAATTTCCCTCGGCATTGCTCGGGCTCTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACTCTAGAGTCGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCACGTAAAGCCCCACAATTCTCCAAGCGTTGA

Protein sequence

MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETADLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKARKAPQFSKR

Homology

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BLAST of Cla97C05G100770 vs. NCBI nr
Match: XP_008466625.1 (PREDICTED: 30S ribosomal protein S9, chloroplastic [Cucumis melo])

HSP 1 Score: 356.7 bits (914), Expect = 5.3e-95
Identity = 196/204 (96.08%), Postives = 199/204 (97.55%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MATSISSLAFSLSSLSFSSQVSHKP ALSFPRSKSLLIS + STSPL+VSASAAA VETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DL+SFVKSSLPGGFAAQTL GTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

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BLAST of Cla97C05G100770 vs. NCBI nr
Match: XP_022143016.1 (30S ribosomal protein S9, chloroplastic [Momordica charantia])

HSP 1 Score: 351.3 bits (900), Expect = 2.2e-93
Identity = 188/204 (92.16%), Postives = 198/204 (97.06%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MA+SISSLAFSLSSLSFSSQ+S KPN LSFPRSKSL+ISH C++SPLVVSASAA GVETA
Sbjct: 1   MASSISSLAFSLSSLSFSSQISQKPNGLSFPRSKSLVISHPCNSSPLVVSASAATGVETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           +LRSFVKS LPGGFAAQTL GTGRRKSA+ARVV++EGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  ELRSFVKSRLPGGFAAQTLIGTGRRKSAIARVVIQEGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHR+PLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRAPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

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BLAST of Cla97C05G100770 vs. NCBI nr
Match: XP_022940950.1 (30S ribosomal protein S9, chloroplastic [Cucurbita moschata])

HSP 1 Score: 338.2 bits (866), Expect = 2.0e-89
Identity = 184/204 (90.20%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MATS+SSLAFSLSSLSFSSQVS  PN+LSFPRSKSL+ISH  S SPLVVSASA + VETA
Sbjct: 1   MATSVSSLAFSLSSLSFSSQVSQMPNSLSFPRSKSLVISHPKSNSPLVVSASATSAVETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           +L+++VKS LPGGFAAQTL GTGRRKSAVARVVL+EGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  ELKNYVKSRLPGGFAAQTLIGTGRRKSAVARVVLQEGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPL+TLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVS DHRSPLKKEGLLTR
Sbjct: 121 YVKVPLLTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSADHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of Cla97C05G100770 vs. NCBI nr
Match: XP_022982074.1 (30S ribosomal protein S9, chloroplastic [Cucurbita maxima])

HSP 1 Score: 337.4 bits (864), Expect = 3.3e-89
Identity = 184/204 (90.20%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MATS+SSLAFSLSSLSFSSQVS  PNALSFPRSKSL+ISH+ S SPLVVSASA + VETA
Sbjct: 1   MATSVSSLAFSLSSLSFSSQVSQIPNALSFPRSKSLVISHSKSNSPLVVSASATSAVETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           +L+++VKS LPGGFAAQTL GTGRRKSAVARVVL+EGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  ELKNYVKSRLPGGFAAQTLIGTGRRKSAVARVVLQEGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPL+TLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVS DHR PLKKEGLLTR
Sbjct: 121 YVKVPLLTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSADHRPPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of Cla97C05G100770 vs. NCBI nr
Match: XP_023523256.1 (30S ribosomal protein S9, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337.0 bits (863), Expect = 4.4e-89
Identity = 183/204 (89.71%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MATS+SSLAFSLSSLSFSSQ+S  PNALSFPRSKSL+ISH  S SPLVVSASA + VETA
Sbjct: 1   MATSVSSLAFSLSSLSFSSQLSQMPNALSFPRSKSLVISHPKSNSPLVVSASATSAVETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           +L+++VKS LPGGFAAQTL GTGRRKSAVARVVL+EGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  ELKNYVKSRLPGGFAAQTLIGTGRRKSAVARVVLQEGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPL+TLGYES+YDVFVKAEGGGLSGQAQAISLGIARALLKVS DHRSPLKKEGLLTR
Sbjct: 121 YVKVPLLTLGYESNYDVFVKAEGGGLSGQAQAISLGIARALLKVSADHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

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BLAST of Cla97C05G100770 vs. TrEMBL
Match: tr|A0A1S3CRR0|A0A1S3CRR0_CUCME (30S ribosomal protein S9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503984 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 3.5e-95
Identity = 196/204 (96.08%), Postives = 199/204 (97.55%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MATSISSLAFSLSSLSFSSQVSHKP ALSFPRSKSLLIS + STSPL+VSASAAA VETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DL+SFVKSSLPGGFAAQTL GTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of Cla97C05G100770 vs. TrEMBL
Match: tr|A0A0A0LDS0|A0A0A0LDS0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854240 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 3.0e-86
Identity = 180/204 (88.24%), Postives = 186/204 (91.18%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MATSISSLAFSLSSLSFSSQVSHKP+ALSFPRSKSLLIS                  ETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPSALSFPRSKSLLISXXXXXXXXXXXXXXXXXXETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DL++FVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYR+AKEYLQGNPLWLQ
Sbjct: 61  DLKTFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYREAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVK+PLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKIPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           D+RVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DARVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of Cla97C05G100770 vs. TrEMBL
Match: tr|A0A2P5FZG2|A0A2P5FZG2_9ROSA (Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_012510 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.4e-83
Identity = 173/206 (83.98%), Postives = 187/206 (90.78%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAA--GVE 60
           MA S++SL  SLSSLSFSSQVS KPN LSF RSK + ISH    SPLVVSAS A+  G+E
Sbjct: 1   MAVSVASLTSSLSSLSFSSQVSLKPNTLSFHRSKLVSISHVAKISPLVVSASVASTEGLE 60

Query: 61  TADLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLW 120
           TADL+ +VKS LPGGFAAQT+FGTGRRKSA+ARVVL+EGTGKVIINYRDAKEYLQGNPLW
Sbjct: 61  TADLKKYVKSRLPGGFAAQTIFGTGRRKSAIARVVLQEGTGKVIINYRDAKEYLQGNPLW 120

Query: 121 LQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLL 180
           LQYVKVPLVTLGYESSYDVFVKA GGGLSGQAQAISLG+ARALLK+S+DHR PL+KEGLL
Sbjct: 121 LQYVKVPLVTLGYESSYDVFVKAHGGGLSGQAQAISLGVARALLKMSEDHRRPLRKEGLL 180

Query: 181 TRDSRVVERKKAGLKKARKAPQFSKR 205
           TRDSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 TRDSRVVERKKAGLKKARKAPQFSKR 206

[Close]

BLAST of Cla97C05G100770 vs. TrEMBL
Match: tr|A0A2P5DA61|A0A2P5DA61_PARAD (Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_083540 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 9.9e-82
Identity = 171/206 (83.01%), Postives = 185/206 (89.81%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAA--GVE 60
           MA S++SL  SLSSLSFSSQVS KPN LSF RSK + ISH    SPLVVSAS A+  G+E
Sbjct: 1   MAVSVASLTSSLSSLSFSSQVSLKPNTLSFHRSKLISISHVAKISPLVVSASVASPEGLE 60

Query: 61  TADLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLW 120
            ADL+ +VKS L GGFAAQT+FGTGRRKSA+ARVVL+EGTGKVIINYRDAKEYLQGNPLW
Sbjct: 61  NADLKKYVKSRLLGGFAAQTIFGTGRRKSAIARVVLQEGTGKVIINYRDAKEYLQGNPLW 120

Query: 121 LQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLL 180
           LQYVKVPLVTLGYESSYDVFVKA GGGLSGQAQAISLG+ARALLK+S+DHR PL+KEGLL
Sbjct: 121 LQYVKVPLVTLGYESSYDVFVKAHGGGLSGQAQAISLGVARALLKLSEDHRRPLRKEGLL 180

Query: 181 TRDSRVVERKKAGLKKARKAPQFSKR 205
           TRDSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 TRDSRVVERKKAGLKKARKAPQFSKR 206

[Close]

BLAST of Cla97C05G100770 vs. TrEMBL
Match: tr|A5BPF9|A5BPF9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g11750 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.1e-79
Identity = 169/209 (80.86%), Postives = 182/209 (87.08%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAA----- 60
           MA S+SSL  SLSSLSFSS +S +P++LSF RS SL ISH   TS L V ASAAA     
Sbjct: 1   MAISMSSLTSSLSSLSFSSHISQRPSSLSFVRSNSLSISHLTKTSSLAVVASAAAVASPL 60

Query: 61  GVETADLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGN 120
            +ETADL+ +VKS LPGGFAAQT+ GTGRRK A+ARVVL+EGTGKVIINYRDAKEYLQGN
Sbjct: 61  ELETADLKKYVKSRLPGGFAAQTIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGN 120

Query: 121 PLWLQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKE 180
           PLWLQYVKVPLVTLGYESSYDVFVKA GGGLSGQAQAISLGIARALLKVS+DHR PL+KE
Sbjct: 121 PLWLQYVKVPLVTLGYESSYDVFVKAHGGGLSGQAQAISLGIARALLKVSEDHRGPLRKE 180

Query: 181 GLLTRDSRVVERKKAGLKKARKAPQFSKR 205
           GLLTRDSRVVERKK GLKKARKAPQFSKR
Sbjct: 181 GLLTRDSRVVERKKVGLKKARKAPQFSKR 209

[Close]

BLAST of Cla97C05G100770 vs. Swiss-Prot
Match: sp|Q9XJ27|RR9_ARATH (30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS9 PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.2e-74
Identity = 154/206 (74.76%), Postives = 173/206 (83.98%), Query Frame = 0


Query: 4   SISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGV-----E 63
           SI++LA SLSSLSFSSQVS +PN +SFPR+ S+    A S     +S +A         E
Sbjct: 3   SITNLASSLSSLSFSSQVSQRPNTISFPRANSVFALPAKSARRASLSITATVSAPPEEEE 62

Query: 64  TADLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLW 123
             +L+ +VKS LPGGFAAQ + GTGRRK A+ARVVL+EGTGKVIINYRDAKEYLQGNPLW
Sbjct: 63  IVELKKYVKSRLPGGFAAQKIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLW 122

Query: 124 LQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLL 183
           LQYVKVPLVTLGYE+SYD+FVKA GGGLSGQAQAI+LG+ARALLKVS DHRSPLKKEGLL
Sbjct: 123 LQYVKVPLVTLGYENSYDIFVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLL 182

Query: 184 TRDSRVVERKKAGLKKARKAPQFSKR 205
           TRD+RVVERKKAGLKKARKAPQFSKR
Sbjct: 183 TRDARVVERKKAGLKKARKAPQFSKR 208

[Close]

BLAST of Cla97C05G100770 vs. Swiss-Prot
Match: sp|P82278|RR9_SPIOL (30S ribosomal protein S9, chloroplastic OS=Spinacia oleracea OX=3562 GN=PRPS9 PE=1 SV=2)

HSP 1 Score: 275.8 bits (704), Expect = 3.9e-73
Identity = 150/208 (72.12%), Postives = 170/208 (81.73%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAG---- 60
           MA SISSL  S +SLSF+S ++ KP  L   R+K   +S+     PLV++A++A      
Sbjct: 1   MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEV 60

Query: 61  VETADLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNP 120
            ETADL  FVKS LPGGFAAQT+ GTGRRK A+ARVVL+EGTGK IINYRDAKEYLQGNP
Sbjct: 61  AETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNP 120

Query: 121 LWLQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEG 180
           LWLQYVK PL TLGYE++YDVFVKA GGGLSGQAQAISLG+ARALLKVS  HR+PLK+EG
Sbjct: 121 LWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEG 180

Query: 181 LLTRDSRVVERKKAGLKKARKAPQFSKR 205
           LLTRDSR+VERKK GLKKARKAPQFSKR
Sbjct: 181 LLTRDSRIVERKKPGLKKARKAPQFSKR 208

[Close]

BLAST of Cla97C05G100770 vs. Swiss-Prot
Match: sp|Q8DMK7|RS9_THEEB (30S ribosomal protein S9 OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=rpsI PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.4e-35
Identity = 79/124 (63.71%), Postives = 97/124 (78.23%), Query Frame = 0


Query: 81  GTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFVK 140
           GTGRRKSAVARV L  G+G++ IN R+  +YLQ NP++L  VK PL TLG E+SYD++V 
Sbjct: 14  GTGRRKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLENSYDIYVN 73

Query: 141 AEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKARKAPQ 200
           A GGGL+GQA AI LGIARAL ++  ++R PLK EG LTRD R  ER+K GL+KARKAPQ
Sbjct: 74  ATGGGLTGQADAIRLGIARALCQLDIENRKPLKTEGYLTRDPRAKERRKYGLRKARKAPQ 133

Query: 201 FSKR 205
           +SKR
Sbjct: 134 YSKR 137

[Close]

BLAST of Cla97C05G100770 vs. Swiss-Prot
Match: sp|Q9MUV1|RR9_MESVI (30S ribosomal protein S9, chloroplastic OS=Mesostigma viride OX=41882 GN=rps9 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.5e-35
Identity = 83/124 (66.94%), Postives = 93/124 (75.00%), Query Frame = 0


Query: 81  GTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFVK 140
           GTGRRKSAVARV L  G G+VIIN      YLQ N  +L  V+ PL TLG E +YD+ VK
Sbjct: 14  GTGRRKSAVARVRLVPGNGEVIINGLPGTNYLQFNGSYLSAVRSPLETLGLEDNYDIIVK 73

Query: 141 AEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKARKAPQ 200
           A GGGL+GQA+AI LG+ARAL  +   +R PLKKEG LTRDSRV ERKK GLKKARKAPQ
Sbjct: 74  AVGGGLTGQAEAIRLGVARALCTIDTSNRHPLKKEGFLTRDSRVKERKKYGLKKARKAPQ 133

Query: 201 FSKR 205
           FSKR
Sbjct: 134 FSKR 137

[Close]

BLAST of Cla97C05G100770 vs. Swiss-Prot
Match: sp|B2ITM7|RS9_NOSP7 (30S ribosomal protein S9 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=rpsI PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-34
Identity = 76/125 (60.80%), Postives = 94/125 (75.20%), Query Frame = 0


Query: 80  FGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFV 139
           +GTGRRK+AVARV L  GTG++ +N +D   Y Q NP +L  +K PL TLG E+ YD+ V
Sbjct: 14  WGTGRRKNAVARVRLVPGTGQLTVNGKDGNLYFQFNPNYLGVIKAPLETLGLENEYDILV 73

Query: 140 KAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKARKAP 199
           KAEGGGL+GQA ++ LG+ARAL ++  D+R PLK EG LTRD R  ERKK GL KARKAP
Sbjct: 74  KAEGGGLTGQADSVRLGVARALCQLDPDNRPPLKTEGYLTRDPRAKERKKYGLHKARKAP 133

Query: 200 QFSKR 205
           Q+SKR
Sbjct: 134 QYSKR 138

[Close]

BLAST of Cla97C05G100770 vs. TAIR10
Match: AT1G74970.1 (ribosomal protein S9)

HSP 1 Score: 280.8 bits (717), Expect = 6.7e-76
Identity = 154/206 (74.76%), Postives = 173/206 (83.98%), Query Frame = 0


Query: 4   SISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGV-----E 63
           SI++LA SLSSLSFSSQVS +PN +SFPR+ S+    A S     +S +A         E
Sbjct: 3   SITNLASSLSSLSFSSQVSQRPNTISFPRANSVFALPAKSARRASLSITATVSAPPEEEE 62

Query: 64  TADLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLW 123
             +L+ +VKS LPGGFAAQ + GTGRRK A+ARVVL+EGTGKVIINYRDAKEYLQGNPLW
Sbjct: 63  IVELKKYVKSRLPGGFAAQKIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLW 122

Query: 124 LQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLL 183
           LQYVKVPLVTLGYE+SYD+FVKA GGGLSGQAQAI+LG+ARALLKVS DHRSPLKKEGLL
Sbjct: 123 LQYVKVPLVTLGYENSYDIFVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLL 182

Query: 184 TRDSRVVERKKAGLKKARKAPQFSKR 205
           TRD+RVVERKKAGLKKARKAPQFSKR
Sbjct: 183 TRDARVVERKKAGLKKARKAPQFSKR 208

[Close]

BLAST of Cla97C05G100770 vs. TAIR10
Match: AT3G49080.1 (Ribosomal protein S5 domain 2-like superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-17
Identity = 54/125 (43.20%), Postives = 73/125 (58.40%), Query Frame = 0


Query: 80  FGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFV 139
           +GTGRRK ++ARV ++ G GK  +N ++   Y          ++ PL        +D+  
Sbjct: 307 YGTGRRKCSIARVWIQPGEGKFQVNEKEFDVYFPMLDHRAALLR-PLAETKTLGRWDIKC 366

Query: 140 KAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKARKAP 199
             +GGG +GQ  AI LGI+RAL     D R+ L+  G LTRDSRVVERKK G  KARK+ 
Sbjct: 367 TVKGGGTTGQVGAIQLGISRALQNWEPDMRTSLRAAGFLTRDSRVVERKKPGKAKARKSF 426

Query: 200 QFSKR 205
           Q+ KR
Sbjct: 427 QWVKR 430

The following BLAST results are available for this feature:

BLAST of Cla97C05G100770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466625.1	5.3e-95	96.08	PREDICTED: 30S ribosomal protein S9, chloroplastic [Cucumis melo]	[more]
XP_022143016.1	2.2e-93	92.16	30S ribosomal protein S9, chloroplastic [Momordica charantia]	[more]
XP_022940950.1	2.0e-89	90.20	30S ribosomal protein S9, chloroplastic [Cucurbita moschata]	[more]
XP_022982074.1	3.3e-89	90.20	30S ribosomal protein S9, chloroplastic [Cucurbita maxima]	[more]
XP_023523256.1	4.4e-89	89.71	30S ribosomal protein S9, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C05G100770 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CRR0\|A0A1S3CRR0_CUCME	3.5e-95	96.08	30S ribosomal protein S9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503984 ...	[more]
tr\|A0A0A0LDS0\|A0A0A0LDS0_CUCSA	3.0e-86	88.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854240 PE=3 SV=1	[more]
tr\|A0A2P5FZG2\|A0A2P5FZG2_9ROSA	2.4e-83	83.98	Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_012510 PE=3 SV=1	[more]
tr\|A0A2P5DA61\|A0A2P5DA61_PARAD	9.9e-82	83.01	Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_083540 PE=3 SV=...	[more]
tr\|A5BPF9\|A5BPF9_VITVI	2.1e-79	80.86	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g11750 PE=3 SV=...	[more]

BLAST of Cla97C05G100770 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9XJ27\|RR9_ARATH	1.2e-74	74.76	30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS9 ...	[more]
sp\|P82278\|RR9_SPIOL	3.9e-73	72.12	30S ribosomal protein S9, chloroplastic OS=Spinacia oleracea OX=3562 GN=PRPS9 PE...	[more]
sp\|Q8DMK7\|RS9_THEEB	1.4e-35	63.71	30S ribosomal protein S9 OS=Thermosynechococcus elongatus (strain BP-1) OX=19722...	[more]
sp\|Q9MUV1\|RR9_MESVI	2.5e-35	66.94	30S ribosomal protein S9, chloroplastic OS=Mesostigma viride OX=41882 GN=rps9 PE...	[more]
sp\|B2ITM7\|RS9_NOSP7	2.1e-34	60.80	30S ribosomal protein S9 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) O...	[more]

BLAST of Cla97C05G100770 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G74970.1	6.7e-76	74.76	ribosomal protein S9	[more]
AT3G49080.1	4.1e-17	43.20	Ribosomal protein S5 domain 2-like superfamily protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR020568	Ribosomal_S5_D2-typ_fold
IPR023035	Ribosomal_S9_bac/plastid
IPR020574	Ribosomal_S9_CS
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR000754	Ribosomal_S9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016020	membrane
cellular_component	GO:0000312	plastid small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G100770.1	Cla97C05G100770.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000754	Ribosomal protein S9	PFAM	PF00380	Ribosomal_S9	coord: 83..204 e-value: 1.8E-41 score: 141.4
IPR000754	Ribosomal protein S9	PANTHER	PTHR21569	RIBOSOMAL PROTEIN S9	coord: 32..204
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	G3DSA:3.30.230.10		coord: 74..204 e-value: 1.1E-45 score: 157.0
None	No IPR available	PANTHER	PTHR21569:SF11	30S RIBOSOMAL PROTEIN S9, CHLOROPLASTIC	coord: 32..204
IPR020574	Ribosomal protein S9, conserved site	PROSITE	PS00360	RIBOSOMAL_S9	coord: 143..161
IPR023035	Ribosomal protein S9, bacterial/plastid	HAMAP	MF_00532_B	Ribosomal_S9_B	coord: 74..204 score: 32.722
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	SSF54211	Ribosomal protein S5 domain 2-like	coord: 79..204

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G100770	Cla020737	Watermelon (97103) v1	wmwmbB207
Cla97C05G100770	Csa3G854240	Cucumber (Chinese Long) v2	cuwmbB216
Cla97C05G100770	MELO3C003890	Melon (DHL92) v3.5.1	mewmbB332
Cla97C05G100770	ClCG05G019240	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G100770	CSPI03G42420	Wild cucumber (PI 183967)	cpiwmbB222
Cla97C05G100770	Cucsa.342080	Cucumber (Gy14) v1	cgywmbB585
Cla97C05G100770	CmaCh01G018850	Cucurbita maxima (Rimu)	cmawmbB479
Cla97C05G100770	CmoCh01G019480	Cucurbita moschata (Rifu)	cmowmbB461
Cla97C05G100770	Lsi04G016340	Bottle gourd (USVL1VR-Ls)	lsiwmbB288
Cla97C05G100770	CsGy3G039930	Cucumber (Gy14) v2	cgybwmbB207
Cla97C05G100770	MELO3C003890.2	Melon (DHL92) v3.6.1	medwmbB319
Cla97C05G100770	Carg17124	Silver-seed gourd	carwmbB0994
Cla97C05G100770	CsaV3_3G044840	Cucumber (Chinese Long) v3	cucwmbB218
Cla97C05G100770	Bhi11G002148	Wax gourd	wgowmbB040

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G100770	Watermelon (97103) v2	wmbwmbB142
Cla97C05G100770	Silver-seed gourd	carwmbB0107
Cla97C05G100770	Cucumber (Gy14) v1	cgywmbB408
Cla97C05G100770	Cucurbita maxima (Rimu)	cmawmbB026
Cla97C05G100770	Cucurbita maxima (Rimu)	cmawmbB181
Cla97C05G100770	Cucurbita maxima (Rimu)	cmawmbB819
Cla97C05G100770	Cucurbita moschata (Rifu)	cmowmbB014
Cla97C05G100770	Cucurbita moschata (Rifu)	cmowmbB166
Cla97C05G100770	Cucurbita moschata (Rifu)	cmowmbB792
Cla97C05G100770	Wild cucumber (PI 183967)	cpiwmbB137
Cla97C05G100770	Cucumber (Chinese Long) v3	cucwmbB137
Cla97C05G100770	Cucumber (Chinese Long) v2	cuwmbB135
Cla97C05G100770	Melon (DHL92) v3.5.1	mewmbB293
Cla97C05G100770	Watermelon (97103) v1	wmwmbB091
Cla97C05G100770	Wax gourd	wgowmbB301