Lsi04G016340 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G016340
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	30S ribosomal protein S9
Location	chr04 : 23826626 .. 23833884 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTATTCAGAGGACAGTATAGTAAATTCTCACACATTATCCCCTTTCAGTTTCACCCTCTACCCCGTCGCTGCATCCACTGCAGTTTCAATTTCTTGAAGGAACTACCTTCATTCTGGATAGAGCACGAAAATGGCTACTTCTATATCCTCTCTTGCATTCTCTCTATCTTCTCTCTCGTTTTCTTCCCAAGTATCACAGAAGCCAAATGCCCTCTCCTTTCCCCGCTCAAAATCTCTTCTAATTTCCCCTTCGTGCTCTAATTCCCCACTTGTGGTATCTGCCTCCGCTGCTGCCGGAGTGGAGACGGCGGACCTTAGGAGCTTCGTGAAATCGAGCCTCCCTGGTGGTTTCGCTGCGCAAACGCTGTTTGGCACTGGTCGCCGGAAATCTGCAGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTACCGCGACGCTAAGGTCCTCAATCTTTTCCCTTGTTCGCGTACTTTCGTTTAGTTCAATCCATTTTGACTTCCTAAGTCTGGTACTGGATTTTCTTTGGACGATTTAGGGTTTTGTTTCTTTTGCCGAATTCGACTAGGTTCGTTTGATGGCAATGCAAATGTTTTCTTGGACTAAACCAATGATTGTTATTATATTTTCCTGATTACCGTCTTCTAGATGAGATGGAACTGTTTTTTTTCCCTCCCCTGTCTCTGTTATCGATCTGCGACGTTTAATATGTTGAATTGGGAATGAACTTGAGAATAACATTCTTTACATTCTAGAATTAAATTCCAAGGCTTTTGCCTCTTCATCTAATAAGGTGAACTTAGATTAAATTCGGAGGGACTGCGGAACAAGTGGTTTCATCAATCAGAAGTCGGGATAAAGGACTGATGCGACTGTATCTATGTCTTGTGCTTCTTTTAAGTTTGAGTTTGATCTTCCAATGAAATGGTTCTAAATGCCAAAAGACATATCTATTTCGGGGATTGAGTAGTTCCCTCGTTCTTTCTTAGTGGGTGTGGGAGTGAAAATGTGCCCTTGTTCTTCCACTTACATCACGTATGGAAATCTTTAGCATCTGATGACGTTAAATCACATTGCAATTGCAAATCCTTCATTTGCCACTTGCCAGTGTTCATCAACTCTCTTCATATCAGTTGACATAGTGCTTCCGGAGATGGCACCATAATCTCAAGTCTTGTATGGTTATTTTATAACCTATACCTGCGTCTGTTCTTTAATAGGGATTATCATACTGATCAACCACAGATTGAGAAAGAGGTTGAGCAGTAGAAAGGGAAGACGAAGAAGAAGTCATTCCAAGCCCTGTTTCAGCCATGGAAACCCTCGAAGAAAGCACTCACGAGAGAGAATTATAAAATACATCTTATACCATATTGACACTTGAGTGTAAATTAAACTTGCATCACTTTCCATTGAGAAAGATTAGCTATTATAGCCAGGTGTTAGTACAAAGTAAGTATACAACTGAATAACAAACTATCTAACAAACTAATTTTCTCTAATAATATGTTTAAAACTTCAAACATTTTGTTTGAGCGAATATGCCTTTCGAGCTTTACTTATAGTGAACTAACGTGTTTTGTTTATTGTTGGGATGCCATTTTCTTTAAATGTTTATAAAGGTTTTCTAGTATATCTTTTGTTGAGTACAACAAGTGGAAGTAGGAAGATTTAACTATTGTTGTGCTATGCTCACTATGACATGTTTTTCTACTATTGATGCTTGGATAGTGTCTTTTAAACTCGACGTGATGACATGGTATTTGGAATAAGGATTGGAATAAGGAGAAGACTCACCCAATTTGTACTTGGAACTTCTACTTATGTATCTAGGACGACTTGTTATACAAACCAATTCATTTTATATAAATCTTTTAAGCTGGGAGGGTGCGTTCAGTAGAATTATACTCACATCTACGTTGGAATACACTATTTGTTGCAGGAATACCTTCAAGGAAATCCATTGTGGCTTCAATATGTGAAAGTTCCATTAGTAACATTGGGATATGAAAGTAGCTACGATGTATTCGTGAAAGCCGAAGGAGGTGGGCTCTCTGGTCAGGCTCAGGCAATTTCCCTTGGCATTGCTCGTGCTTTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACTCTAGAGTCGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCACGTAAAGCCCCACAATTCTCCAAGCGTTGAGGTGAATCGTTTTCTGTAGCCTCATTTCTTACTTTATTTGTCCAACCCAGATGTCTTCTTCTACTTTCTTTCCTCTCTAATGTAGCGTTTAAACATTCCTCCATATGAAAATTGAGCTGGAGCCAGGATGTGTATTATAAAGTCAACCCATAATTGATCATTATGATTCTTTTTTAAAAACATGCTTTTAGTCCATATAATTTGGCCTAAGGATCTGATTTTGTTGTGATCTACTCCTTTTTATTCATTTTGATGTCAGGAGTATACGAAATCTGTTAGCTTCGTTTATGGGTTGTTTTTTAGTTTAACATTCTGCTTAAAGAAAATGTTGTACGTACTGAGATATTTGAAATCATTCTAATTTCTTACCATTTGAAAATTTTTCTAATAAGAATATAAGTTTATTTTTCTGATAATATTTTGTTTTAGTTTTTGAAATTTATGCTTTTCTTCTTCTTTTAAAGAAATATTTAAATTCTTAGTTATCAAAGTTTTGGTTTTTGAAAACATCAGTAGAAACTAACAAAGTAACTATAATGAATTGGTCTAGTGGTAGTGTAAACATTAAAAAAAAAAGTAGAAAGACTAAGGGGTCATGAATTCAATCCATGGTGGCCACCTACCTTTGATTTAATATCCTACAGTTTCTTTGACACTCAAACAAACAAGAACTTATAGATTAAACTACTCTCTATAAGTTTAATTTTAAAAAAATAAATTTAAATATTCTCCCGTTTGTAGCTTTTAGAATTAAGTTTAAAAAATTTAACATTTTTGTTGATTGTAGGTCTCACATGTTTAGTTCTATGAATTAAGAACTCTAAAAATGAAAAGTAGGATTTTTTTTCAAAAGGAAAAAAAAAAAGAAAAAAAAATGATTGTTTTCAAATATAAGAAAATGAGTTAACTTATTTATAAATATAGCACAATAGAGTGATAGACAGTAGTAAGATACGCAATAATCAAACCGCTGCATTTTTTTTATTAGTTCAACAGAGCCACACAAATGCAAGAATTATTAGTAACTAGATTATAATTTAAATCTCATTTCCATTAAAAAAAAAAAAACTCACCTCTAAATTTTGTAGACAACATGAGAATTAACTCACTCGACATAAAATTGTACTATAAAAACTTAAAATATAGGAGGAAAATTATCACTTTAATTTATAAAAAAAATTGCCAAAATGAAAAGTGTGACTGGTTCAGTCTGATTTTAAAAAAATCCGATTATCACTTTAATTTGAGGAAAATTGCCAAAATATAGGACACTTGTAGGAGGGCTAAAAGACTCTTAGGATGAGTTTTCAATTTAAAGACTTTGACAAATGGACATATGAAATGTGAATTTTTCTTAGGAAAAAAAAATTCTAAAAATCATGGAAAAATCTCCTTTCACAAAACACTTTCTCAAGATTCAATAAAAATAAAGTTGTATTTCATATTTTTAGATATGTGTTTGGTAATAGATTCATAAATTGGATTCTAATTTAAACAATTATTTAAAATATAACTGATACTATATATATATTTTTAAATTTTTTATTACATACTAATATTTAGTTAGACTATTAATTTATTTATGAATATGATTTTTAATTATGAATTATCGAGACCCTAAAATTTTCAAGTTGAAGTTTTCTTGATTTACAATGCTCTAAGACCGTGGTGTTTGGTTCTGTCATCCGTTCAGAAAATGGGACCAAACTGAACCGTAAACGCCCAGCACTTGAAAATATTGAAATGATTTTCCGTCCTTATCTCCTCCCCAATTTGTCGCTGCCGTCACTGGGCACCGGTAGCCCGCAGGTTCTCACCAGTCACCAGCACTTTTCTTTGTTTCTTGTTCTTGTAATGTGAGTCCTTCAATCCGTTTTAGCTCGAGTTCATAGGAGATCTTGAAGCTGCTGTAAAAGAATATCTATATGTTCGAGATCTGAAGCCCTAAATCTGAGTCTTCTCAGGTGCTTGAATAATTCTTGTAGCATATCAGCGATCCGTTTTCAGTTACTACAAATTTTGCCGTCTAGAATCTCTATCACTGGCATCTTACATGTCGAACAATAGCAACAGTGTATCCATCCCAGTTTCTGACAATGAGTTGGACGAGTTGGAAAGGATGCGTGTTCGAGTTCGGAGGAAGCGAAAAAAACAAGGGAATCGAGTCAAGAATGAGTTGGCTCCTCGAGTTTTTAGAATGATGTTGAAGTATTGGTTGGTTGTTTTCTTCCTTCTTGCTGCGGGATTGCTTTTGTTTGAGGCAACAAAAATTGGTCAGAAATCGAGGCTGGAGGCGAAATCGGAGCGTGGTGGCATGACGAGCCCAAAGTTAGACGATTCGAAACTCGGAAATGTGAAGGAGTCGGGGTTGGACAATAAACCAGATGGGAATTTGAATAGACTCGATCCGGTTACTAGGATGGTTGCCGGAGTAAGAGAACGTAAGTTATCATCAACCTTGTAAGAACCTTACAGTTCCCTATGATCTGTTTGATTTGTCTTTTGATCTTCTCTACACATTAGGTTCTGATCTTACATTAGAGTGGTTGGACTTTTGAAACATGAAGAAGCTGCAGGATCTGAAATGCATATGTTTTTTCAATTCCTTACTGCACGTCCGATTATTTTACTTAATTTCTCGCTGGAAATTCATCTCTCCTTGGGCACTTTGAATGTGTGTATGTATGTAAGAGAGAGGGACAGGATCTCAAATTATCTTAGTGTTACGGATGCACAAGAACTGAAGTTGACATAAATTTTTGGGTTGTATCAGGTTGCTTGAAACTCCTGCCACCAAAAGAACTTGAGCAATTGGATATTCCTGTGCGTGAAGGTTCGCCAGTTCCAGAGATTGATGTGAACTACATAACGGATAGTGACAGTTCCTTGTTTGTAGATAAATCTTCCTTGTCACGACAGAGCATGAATGCAACAAGATTTAATCTATTTACTGGATACCAGACTCTCGACCAGAGAGAAAAAAGTTTTAAGGTTATAATCAACTTCTCACTAATTTCTTTGCTCCCATGGAATCTCCTCTGTCTTGAATAGAAATTGGGTTTTCAAGTTTACCATTTTTCTGTTTGCTCTCAAGCTCTAGGAATTCATCGTTACAGGTAAATGGAACTGTTGAGGTACATTGCGGTTTTTACAGTGATGATGGGGGTTTCAGAATTTCTAATGAAGACAGAACTTTCATGCAAACATGCACTCTTGTGGTGTCCACATGCGCATTTGGTGGTGGAGATGATCTTTATCAACCTATTGGAATGTCAGAGGCATCACTTCGCAAGGTTGCTATATATTGCTTTTGCTTATTTTTGAATTGCCTATTGTGCATTTAAGTTTTATGTTCGTTCTCTTATCATCTTTTCAAGAGTGCATTTAGTAAGGGCGTATATAACTGATGCAGGTTTGCTATGTTGCGTTTTGGGATGAAATCACTTTAAGTGCACAGGAATCAGTGGGACATGTTATTGGTGATGATGGATTTATTGGGAAATGGCGTGTTGTGGTTGTGAAGGATCTTCCTTTCGCTGATCAAAGATTGAATGGCAAAATCCCGAAGGTAATGAGTTGCAGAGTGAAATTGATTAGACAATCAGATATCACCTGTTTCTTATCCCTTGGAAGCCTTTCTTGTTTGACATGAAAAATGTTGTATGCTACGGTCTGTTGCTCTGTCTTTTGCTGGATTTATGACCGCTCAGCATATCATTTTTGTTCTCACTAATTGTTGTAGTAAATAAGTCATTTTTTTTTTCTTTTCTATTTGGCTTAATACGGGATGAAAATATTATCTTCAACATCCGGATTAATAATTCGCATGCATGCCTCATGTCAGACTTTGAACGAATCAGACCACAAAATCTTGCTATTAAGCAGCGAACTTAACTCAAAGAGGACATTTTTTTAAACAAGCAAAAGAAAGATTTCCATGCTAGGTGAACATTTTTTGTAATGTTCAGCTCAACACAAATTCTCGGTCTCTCTTCAGTTGATTGTTTTCACACTATTGGGAGCTGTAATTTACAATTCATCTCTTGAATTTGTCACATCTATAAACTTGGCTATATGGATTATTATATCATGTGCTGCTGTTATCAGATGTTGGGACATCGTCTCTTCCCTAATGTGAAGTACTCCATTTGGGTAGATTCAAAGTCTCAATTCCGGAGAGATCCACTAGGAGTGTTTGAAGCTCTTCTTTGGCGTTCAAATTCTGAACTCGCAATATCACAACATGGAGCTCGGAGTAGCGTCTATGATGAGGCTGGAGCTGTGGTCAAGAAACATAAAGCCACCCCAGAAGAAGTCGACGTGCAGATAAAACGATATCGCTATGATCACTTCCCAGATGATAAGAGATTTAATGGGCATAAAGGTATTATAAACTCTAGCTAGATTACTCTTTATAATTAAGTAGCTCTAATAATATAATAACCTACAGTTTACTTCATGACTGAATGTCTTTTTTCTTTGGAAAAGGGTGAAAACATCTCAACTTAGCTCTAATAATAACAAGCTTATATATTTGAATTACTTCATCTTGTACTGAGATCGTGCCACTATTTTTGCAGCTCTTGCAGAAGCCTCTGTTATTGTTAGGGAGCACTCTCCCGTGGTGAATTTGTTCATGTGCCTTTGGTTTAATGAGGTGGTGCGGTTTACTTCCAGGGATCAACTTAGCTTCCCATATGTTCTATGGCGCCTGAAAGTTGTTAAGAAAATTAATATGTTCCCCGTTTGCATTCGCAAAGATCTTGTCAATAGTATGGGCCACATTCGCAAGGCTAAGCCTCTGAATGTAAGCCGATTATCTTGAGATACTTTCCACTCCACTCTTTTGAAGCCTGCAAGCTTTGTATTTACCTAATTCATTCTTTAATTTGTTTAGTAATTATGTGCTCTAAGTCTATAGAAATCATTTCCCCTAGTTACACATGGAATTTGAACATGTAATCAAGGACATATATTTTAATTAGTTGAGCTAAGCTCAAGTTAACAGAAATTAG

mRNA sequence

AGTATTCAGAGGACAGTATAGTAAATTCTCACACATTATCCCCTTTCAGTTTCACCCTCTACCCCGTCGCTGCATCCACTGCAGTTTCAATTTCTTGAAGGAACTACCTTCATTCTGGATAGAGCACGAAAATGGCTACTTCTATATCCTCTCTTGCATTCTCTCTATCTTCTCTCTCGTTTTCTTCCCAAGTATCACAGAAGCCAAATGCCCTCTCCTTTCCCCGCTCAAAATCTCTTCTAATTTCCCCTTCGTGCTCTAATTCCCCACTTGTGGTATCTGCCTCCGCTGCTGCCGGAGTGGAGACGGCGGACCTTAGGAGCTTCGTGAAATCGAGCCTCCCTGGTGGTTTCGCTGCGCAAACGCTGTTTGGCACTGGTCGCCGGAAATCTGCAGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTACCGCGACGCTAAGGAATACCTTCAAGGAAATCCATTGTGGCTTCAATATGTGAAAGTTCCATTAGTAACATTGGGATATGAAAGTAGCTACGATGTATTCGTGAAAGCCGAAGGAGGTGGGCTCTCTGGTCAGGCTCAGGCAATTTCCCTTGGCATTGCTCGTGCTTTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACTCTAGAGTCGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCACAAAATGGGACCAAACTGAACCGTAAACGCCCAGCACTTGAAAATATTGAAATGATTTTCCGTCCTTATCTCCTCCCCAATTTGTCGCTGCCGTCACTGGGCACCGGTAGCCCGCAGCGATCCGTTTTCAGTTACTACAAATTTTGCCGTCTAGAATCTCTATCACTGGCATCTTACATGTCGAACAATAGCAACAGTGTATCCATCCCAGTTTCTGACAATGAGTTGGACGAGTTGGAAAGGATGCGTGTTCGAGTTCGGAGGAAGCGAAAAAAACAAGGGAATCGAGTCAAGAATGAGTTGGCTCCTCGAGTTTTTAGAATGATGTTGAAGTATTGGTTGGTTGTTTTCTTCCTTCTTGCTGCGGGATTGCTTTTGTTTGAGGCAACAAAAATTGGTCAGAAATCGAGGCTGGAGGCGAAATCGGAGCGTGGTGGCATGACGAGCCCAAAGTTAGACGATTCGAAACTCGGAAATGTGAAGGAGTCGGGGTTGGACAATAAACCAGATGGGAATTTGAATAGACTCGATCCGGTTACTAGGATGGTTGCCGGAGTAAGAGAACGTTGCTTGAAACTCCTGCCACCAAAAGAACTTGAGCAATTGGATATTCCTGTGCGTGAAGGTTCGCCAGTTCCAGAGATTGATGTGAACTACATAACGGATAGTGACAGTTCCTTGTTTGTAGATAAATCTTCCTTGTCACGACAGAGCATGAATGCAACAAGATTTAATCTATTTACTGGATACCAGACTCTCGACCAGAGAGAAAAAAGTTTTAAGGTAAATGGAACTGTTGAGGTACATTGCGGTTTTTACAGTGATGATGGGGGTTTCAGAATTTCTAATGAAGACAGAACTTTCATGCAAACATGCACTCTTGTGGTGTCCACATGCGCATTTGGTGGTGGAGATGATCTTTATCAACCTATTGGAATGTCAGAGGCATCACTTCGCAAGGTTTGCTATGTTGCGTTTTGGGATGAAATCACTTTAAGTGCACAGGAATCAGTGGGACATGTTATTGGTGATGATGGATTTATTGGGAAATGGCGTGTTGTGGTTGTGAAGGATCTTCCTTTCGCTGATCAAAGATTGAATGGCAAAATCCCGAAGATGTTGGGACATCGTCTCTTCCCTAATGTGAAGTACTCCATTTGGGTAGATTCAAAGTCTCAATTCCGGAGAGATCCACTAGGAGTGTTTGAAGCTCTTCTTTGGCGTTCAAATTCTGAACTCGCAATATCACAACATGGAGCTCGGAGTAGCGTCTATGATGAGGCTGGAGCTGTGGTCAAGAAACATAAAGCCACCCCAGAAGAAGTCGACGTGCAGATAAAACGATATCGCTATGATCACTTCCCAGATGATAAGAGATTTAATGGGCATAAAGCTCTTGCAGAAGCCTCTGTTATTGTTAGGGAGCACTCTCCCGTGGTGAATTTGTTCATGTGCCTTTGGTTTAATGAGGTGGTGCGGTTTACTTCCAGGGATCAACTTAGCTTCCCATATGTTCTATGGCGCCTGAAAGTTGTTAAGAAAATTAATATGTTCCCCGTTTGCATTCGCAAAGATCTTGTCAATAGTATGGGCCACATTCGCAAGGCTAAGCCTCTGAATGTAAGCCGATTATCTTGAGATACTTTCCACTCCACTCTTTTGAAGCCTGCAAGCTTTGTATTTACCTAATTCATTCTTTAATTTGTTTAGTAATTATGTGCTCTAAGTCTATAGAAATCATTTCCCCTAGTTACACATGGAATTTGAACATGTAATCAAGGACATATATTTTAATTAGTTGAGCTAAGCTCAAGTTAACAGAAATTAG

Coding sequence (CDS)

ATGGCTACTTCTATATCCTCTCTTGCATTCTCTCTATCTTCTCTCTCGTTTTCTTCCCAAGTATCACAGAAGCCAAATGCCCTCTCCTTTCCCCGCTCAAAATCTCTTCTAATTTCCCCTTCGTGCTCTAATTCCCCACTTGTGGTATCTGCCTCCGCTGCTGCCGGAGTGGAGACGGCGGACCTTAGGAGCTTCGTGAAATCGAGCCTCCCTGGTGGTTTCGCTGCGCAAACGCTGTTTGGCACTGGTCGCCGGAAATCTGCAGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTACCGCGACGCTAAGGAATACCTTCAAGGAAATCCATTGTGGCTTCAATATGTGAAAGTTCCATTAGTAACATTGGGATATGAAAGTAGCTACGATGTATTCGTGAAAGCCGAAGGAGGTGGGCTCTCTGGTCAGGCTCAGGCAATTTCCCTTGGCATTGCTCGTGCTTTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACTCTAGAGTCGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCACAAAATGGGACCAAACTGAACCGTAAACGCCCAGCACTTGAAAATATTGAAATGATTTTCCGTCCTTATCTCCTCCCCAATTTGTCGCTGCCGTCACTGGGCACCGGTAGCCCGCAGCGATCCGTTTTCAGTTACTACAAATTTTGCCGTCTAGAATCTCTATCACTGGCATCTTACATGTCGAACAATAGCAACAGTGTATCCATCCCAGTTTCTGACAATGAGTTGGACGAGTTGGAAAGGATGCGTGTTCGAGTTCGGAGGAAGCGAAAAAAACAAGGGAATCGAGTCAAGAATGAGTTGGCTCCTCGAGTTTTTAGAATGATGTTGAAGTATTGGTTGGTTGTTTTCTTCCTTCTTGCTGCGGGATTGCTTTTGTTTGAGGCAACAAAAATTGGTCAGAAATCGAGGCTGGAGGCGAAATCGGAGCGTGGTGGCATGACGAGCCCAAAGTTAGACGATTCGAAACTCGGAAATGTGAAGGAGTCGGGGTTGGACAATAAACCAGATGGGAATTTGAATAGACTCGATCCGGTTACTAGGATGGTTGCCGGAGTAAGAGAACGTTGCTTGAAACTCCTGCCACCAAAAGAACTTGAGCAATTGGATATTCCTGTGCGTGAAGGTTCGCCAGTTCCAGAGATTGATGTGAACTACATAACGGATAGTGACAGTTCCTTGTTTGTAGATAAATCTTCCTTGTCACGACAGAGCATGAATGCAACAAGATTTAATCTATTTACTGGATACCAGACTCTCGACCAGAGAGAAAAAAGTTTTAAGGTAAATGGAACTGTTGAGGTACATTGCGGTTTTTACAGTGATGATGGGGGTTTCAGAATTTCTAATGAAGACAGAACTTTCATGCAAACATGCACTCTTGTGGTGTCCACATGCGCATTTGGTGGTGGAGATGATCTTTATCAACCTATTGGAATGTCAGAGGCATCACTTCGCAAGGTTTGCTATGTTGCGTTTTGGGATGAAATCACTTTAAGTGCACAGGAATCAGTGGGACATGTTATTGGTGATGATGGATTTATTGGGAAATGGCGTGTTGTGGTTGTGAAGGATCTTCCTTTCGCTGATCAAAGATTGAATGGCAAAATCCCGAAGATGTTGGGACATCGTCTCTTCCCTAATGTGAAGTACTCCATTTGGGTAGATTCAAAGTCTCAATTCCGGAGAGATCCACTAGGAGTGTTTGAAGCTCTTCTTTGGCGTTCAAATTCTGAACTCGCAATATCACAACATGGAGCTCGGAGTAGCGTCTATGATGAGGCTGGAGCTGTGGTCAAGAAACATAAAGCCACCCCAGAAGAAGTCGACGTGCAGATAAAACGATATCGCTATGATCACTTCCCAGATGATAAGAGATTTAATGGGCATAAAGCTCTTGCAGAAGCCTCTGTTATTGTTAGGGAGCACTCTCCCGTGGTGAATTTGTTCATGTGCCTTTGGTTTAATGAGGTGGTGCGGTTTACTTCCAGGGATCAACTTAGCTTCCCATATGTTCTATGGCGCCTGAAAGTTGTTAAGAAAATTAATATGTTCCCCGTTTGCATTCGCAAAGATCTTGTCAATAGTATGGGCCACATTCGCAAGGCTAAGCCTCTGAATGTAAGCCGATTATCTTGA

Protein sequence

MATSISSLAFSLSSLSFSSQVSQKPNALSFPRSKSLLISPSCSNSPLVVSASAAAGVETADLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKAQNGTKLNRKRPALENIEMIFRPYLLPNLSLPSLGTGSPQRSVFSYYKFCRLESLSLASYMSNNSNSVSIPVSDNELDELERMRVRVRRKRKKQGNRVKNELAPRVFRMMLKYWLVVFFLLAAGLLLFEATKIGQKSRLEAKSERGGMTSPKLDDSKLGNVKESGLDNKPDGNLNRLDPVTRMVAGVRERCLKLLPPKELEQLDIPVREGSPVPEIDVNYITDSDSSLFVDKSSLSRQSMNATRFNLFTGYQTLDQREKSFKVNGTVEVHCGFYSDDGGFRISNEDRTFMQTCTLVVSTCAFGGGDDLYQPIGMSEASLRKVCYVAFWDEITLSAQESVGHVIGDDGFIGKWRVVVVKDLPFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHGARSSVYDEAGAVVKKHKATPEEVDVQIKRYRYDHFPDDKRFNGHKALAEASVIVREHSPVVNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKDLVNSMGHIRKAKPLNVSRLS

Homology

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BLAST of Lsi04G016340 vs. Swiss-Prot
Match: RR9_ARATH (30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana GN=RPS9 PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 5.8e-71
Identity = 147/206 (71.36%), Postives = 174/206 (84.47%), Query Frame = 1


Query: 4   SISSLAFSLSSLSFSSQVSQKPNALSFPRSKSLLISP--SCSNSPLVVSASAAAGVET-- 63
           SI++LA SLSSLSFSSQVSQ+PN +SFPR+ S+   P  S   + L ++A+ +A  E   
Sbjct: 3   SITNLASSLSSLSFSSQVSQRPNTISFPRANSVFALPAKSARRASLSITATVSAPPEEEE 62

Query: 64  -ADLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLW 123
             +L+ +VKS LPGGFAAQ + GTGRRK A+ARVVL+EGTGKVIINYRDAKEYLQGNPLW
Sbjct: 63  IVELKKYVKSRLPGGFAAQKIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLW 122

Query: 124 LQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLL 183
           LQYVKVPLVTLGYE+SYD+FVKA GGGLSGQAQAI+LG+ARALLKVS DHRSPLKKEGLL
Sbjct: 123 LQYVKVPLVTLGYENSYDIFVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLL 182

Query: 184 TRDSRVVERKKAGLKKAQNGTKLNRK 205
           TRD+RVVERKKAGLKKA+   + +++
Sbjct: 183 TRDARVVERKKAGLKKARKAPQFSKR 208

[Close]

BLAST of Lsi04G016340 vs. Swiss-Prot
Match: RR9_SPIOL (30S ribosomal protein S9, chloroplastic (Fragment) OS=Spinacia oleracea GN=PRPS9 PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.8e-65
Identity = 133/196 (67.86%), Postives = 157/196 (80.10%), Query Frame = 1


Query: 13  SSLSFSSQVSQKPNALSFPRSKSLLISPSCSNSPLVVSASAAAG----VETADLRSFVKS 72
           +SLSF+S ++ KP  L   R+K   +S      PLV++A++A       ETADL  FVKS
Sbjct: 2   ASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEVAETADLEKFVKS 61

Query: 73  SLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVT 132
            LPGGFAAQT+ GTGRRK A+ARVVL+EGTGK IINYRDAKEYLQGNPLWLQYVK PL T
Sbjct: 62  RLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYVKTPLAT 121

Query: 133 LGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERK 192
           LGYE++YDVFVKA GGGLSGQAQAISLG+ARALLKVS  HR+PLK+EGLLTRDSR+VERK
Sbjct: 122 LGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLLTRDSRIVERK 181

Query: 193 KAGLKKAQNGTKLNRK 205
           K GLKKA+   + +++
Sbjct: 182 KPGLKKARKAPQFSKR 197

[Close]

BLAST of Lsi04G016340 vs. Swiss-Prot
Match: RS9_THEEB (30S ribosomal protein S9 OS=Thermosynechococcus elongatus (strain BP-1) GN=rpsI PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 4.5e-31
Identity = 71/124 (57.26%), Postives = 93/124 (75.00%), Query Frame = 1


Query: 81  GTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFVK 140
           GTGRRKSAVARV L  G+G++ IN R+  +YLQ NP++L  VK PL TLG E+SYD++V 
Sbjct: 14  GTGRRKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLENSYDIYVN 73

Query: 141 AEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKAQNGTK 200
           A GGGL+GQA AI LGIARAL ++  ++R PLK EG LTRD R  ER+K GL+KA+   +
Sbjct: 74  ATGGGLTGQADAIRLGIARALCQLDIENRKPLKTEGYLTRDPRAKERRKYGLRKARKAPQ 133

Query: 201 LNRK 205
            +++
Sbjct: 134 YSKR 137

[Close]

BLAST of Lsi04G016340 vs. Swiss-Prot
Match: RR9_MESVI (30S ribosomal protein S9, chloroplastic OS=Mesostigma viride GN=rps9 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.3e-30
Identity = 74/124 (59.68%), Postives = 89/124 (71.77%), Query Frame = 1


Query: 81  GTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFVK 140
           GTGRRKSAVARV L  G G+VIIN      YLQ N  +L  V+ PL TLG E +YD+ VK
Sbjct: 14  GTGRRKSAVARVRLVPGNGEVIINGLPGTNYLQFNGSYLSAVRSPLETLGLEDNYDIIVK 73

Query: 141 AEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKAQNGTK 200
           A GGGL+GQA+AI LG+ARAL  +   +R PLKKEG LTRDSRV ERKK GLKKA+   +
Sbjct: 74  AVGGGLTGQAEAIRLGVARALCTIDTSNRHPLKKEGFLTRDSRVKERKKYGLKKARKAPQ 133

Query: 201 LNRK 205
            +++
Sbjct: 134 FSKR 137

[Close]

BLAST of Lsi04G016340 vs. Swiss-Prot
Match: RS9_NOSP7 (30S ribosomal protein S9 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rpsI PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 6.5e-30
Identity = 68/125 (54.40%), Postives = 90/125 (72.00%), Query Frame = 1


Query: 80  FGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFV 139
           +GTGRRK+AVARV L  GTG++ +N +D   Y Q NP +L  +K PL TLG E+ YD+ V
Sbjct: 14  WGTGRRKNAVARVRLVPGTGQLTVNGKDGNLYFQFNPNYLGVIKAPLETLGLENEYDILV 73

Query: 140 KAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKAQNGT 199
           KAEGGGL+GQA ++ LG+ARAL ++  D+R PLK EG LTRD R  ERKK GL KA+   
Sbjct: 74  KAEGGGLTGQADSVRLGVARALCQLDPDNRPPLKTEGYLTRDPRAKERKKYGLHKARKAP 133

Query: 200 KLNRK 205
           + +++
Sbjct: 134 QYSKR 138

[Close]

BLAST of Lsi04G016340 vs. TrEMBL
Match: A0A0A0LGH2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G854230 PE=4 SV=1)

HSP 1 Score: 855.5 bits (2209), Expect = 4.7e-245
Identity = 428/486 (88.07%), Postives = 449/486 (92.39%), Query Frame = 1


Query: 255 MSNNSNSVSIPVSDNELDELERMRVRVRRKRKKQGNRVKNELAPRVFRMMLKYWLVVFFL 314
           MSNNS+SVSIPVSDNELD++ERMRVRVRRKRKKQGNRV NELAPRVFRMMLKYWLVVFFL
Sbjct: 1   MSNNSSSVSIPVSDNELDDMERMRVRVRRKRKKQGNRVNNELAPRVFRMMLKYWLVVFFL 60

Query: 315 LAAGLLLFEATKIGQKSRLEAKSERGGMTSPKLDDSKLGNVKESGLDNKPDGNLNRLDPV 374
           LAAGLLLFEATKIGQ SRLE KSE             L   KESGLD KPDGNLNRLDPV
Sbjct: 61  LAAGLLLFEATKIGQNSRLETKSE-------------LETDKESGLDKKPDGNLNRLDPV 120

Query: 375 TRMVAGVRERCLKLLPPKELEQLDIPVREGSPVPEIDVNYITDSDSSLFVDKSSLSRQSM 434
           TRMVAGVR+RCLK+LPP ELEQLDIPV E SPV EIDVNYITDSD+SL VDK+  SRQSM
Sbjct: 121 TRMVAGVRKRCLKILPPNELEQLDIPVLEDSPVSEIDVNYITDSDNSLSVDKTYFSRQSM 180

Query: 435 NATRFNLFTGYQTLDQREKSFKVNGTVEVHCGFYSDDGGFRISNEDRTFMQTCTLVVSTC 494
           NATRFNLFTGYQTL+QRE S+KVN T EVHCGFYS+DGGF+ISNED+TFM+TCT VVSTC
Sbjct: 181 NATRFNLFTGYQTLEQRENSYKVNRTAEVHCGFYSNDGGFKISNEDKTFMRTCTFVVSTC 240

Query: 495 AFGGGDDLYQPIGMSEASLRKVCYVAFWDEITLSAQESVGHVIGDDGFIGKWRVVVVKDL 554
           AFGGGDDLYQPIGMSEASLRKVC+VAFWDEITLS QES GHVIG+ GFIGKWRVVVV+DL
Sbjct: 241 AFGGGDDLYQPIGMSEASLRKVCFVAFWDEITLSVQESAGHVIGEGGFIGKWRVVVVRDL 300

Query: 555 PFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHG 614
           PF+DQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHG
Sbjct: 301 PFSDQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHG 360

Query: 615 ARSSVYDEAGAVVKKHKATPEEVDVQIKRYRYDHFPDDKRFNGHKALAEASVIVREHSPV 674
           ARSSVYDEA AVVKKHKATPEEVDVQIK+YR+D FPDDKRFNGHKALAEASVIVREHSPV
Sbjct: 361 ARSSVYDEAEAVVKKHKATPEEVDVQIKQYRHDQFPDDKRFNGHKALAEASVIVREHSPV 420

Query: 675 VNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKDLVNSMGHIRKAKPL 734
           VNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKV+KK+NMFPVCIRKDLVNSMGHI KAKPL
Sbjct: 421 VNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVLKKLNMFPVCIRKDLVNSMGHISKAKPL 473

Query: 735 NVSRLS 741
           NVSRLS
Sbjct: 481 NVSRLS 473

[Close]

BLAST of Lsi04G016340 vs. TrEMBL
Match: M5X0Y6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005010mg PE=4 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 7.7e-195
Identity = 341/477 (71.49%), Postives = 398/477 (83.44%), Query Frame = 1


Query: 258 NSNSVSIPVSDNELDELERMRVRVRRKRKKQGNRVKNELAPRVFRMMLKYWLVVFFLLAA 317
           N+NS+SI VSD+E DEL RMRVRVRRKRKK G+R+KNE   RV R +++YW ++ FL A 
Sbjct: 3   NNNSISISVSDDEPDELGRMRVRVRRKRKKPGHRLKNEFLHRVVRKLVRYWALLIFLPAL 62

Query: 318 GLLLFEATKIGQKSRLEAKSERGGMTSPKLDDSKLGNVKESGLDNKPDGNLNRLDPVTRM 377
           GLLL+EA++IG+K R  A +E G      L DS+L NV    L+ K DGNLNRLD  TR+
Sbjct: 63  GLLLYEASRIGRKPRSVANTELGASEKSTLVDSELSNVTNPSLEKKSDGNLNRLDATTRV 122

Query: 378 VAGVRERCLKLLPPKELEQLDIPVREGSPVPEIDVNYITDSDSSLFVDKSSLSRQSMNAT 437
           V GVR+RCLK+L P+ELE L+IPVRE +  P   V YI+++D+      S+LS++  +AT
Sbjct: 123 VGGVRQRCLKILSPEELEHLEIPVREEANSPVSKVLYISENDTPFLGGNSTLSQEHTDAT 182

Query: 438 RFNLFTGYQTLDQREKSFKVNGTVEVHCGFYSDDGGFRISNEDRTFMQTCTLVVSTCAFG 497
           RFNLFTG QTLDQR K+FKVN TV ++CGFYS++GGF+ISNED+ +MQ+C +VVSTCAFG
Sbjct: 183 RFNLFTGSQTLDQRSKTFKVNETVSMNCGFYSENGGFKISNEDKDYMQSCKVVVSTCAFG 242

Query: 498 GGDDLYQPIGMSEASLRKVCYVAFWDEITLSAQESVGHVIGDDGFIGKWRVVVVKDLPFA 557
           GGDDLYQPIGMSE SLRKVCYVAFWDE+TLS+QES  H I   GFIGKWR+VVV+DLPFA
Sbjct: 243 GGDDLYQPIGMSEESLRKVCYVAFWDEVTLSSQESAEHRIDGYGFIGKWRIVVVRDLPFA 302

Query: 558 DQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHGARS 617
           DQRLNGKIPKML HRLFP+ KYSIWVDSKSQFRRDPLGV EALLWRSNS LAIS+HGARS
Sbjct: 303 DQRLNGKIPKMLAHRLFPHAKYSIWVDSKSQFRRDPLGVLEALLWRSNSVLAISEHGARS 362

Query: 618 SVYDEAGAVVKKHKATPEEVDVQIKRYRYDHFPDDKRFNGHKALAEASVIVREHSPVVNL 677
           SVYDEA AVVKK+KA PEEV+VQ+ +YR+D  P+DKRFNG KALAEASVIVREH+ + N+
Sbjct: 363 SVYDEAKAVVKKNKAKPEEVEVQLSQYRHDGLPEDKRFNGKKALAEASVIVREHTSLTNM 422

Query: 678 FMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKDLVNSMGHIRKAKPL 735
           FMCLWFNEVVRFTSRDQLSFPYVLWRLKV+K INMFPVC RKDLVNSMGHIRKAKPL
Sbjct: 423 FMCLWFNEVVRFTSRDQLSFPYVLWRLKVLKNINMFPVCTRKDLVNSMGHIRKAKPL 479

[Close]

BLAST of Lsi04G016340 vs. TrEMBL
Match: A0A061FJN2_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_033969 PE=4 SV=1)

HSP 1 Score: 670.2 bits (1728), Expect = 2.8e-189
Identity = 341/480 (71.04%), Postives = 394/480 (82.08%), Query Frame = 1


Query: 258 NSNSVSIPVSDNELDELERMRVRVRRKRKKQGN-RVKNELAPRVFRMMLKYWLVVFFLLA 317
           N+NS+SI VSD+E DEL RMRVRVRRKRKK G+ R + E   R+ R+ +KYW ++ FL A
Sbjct: 7   NTNSISISVSDDESDELGRMRVRVRRKRKKHGHHRARTEFTQRLIRLFVKYWTLLIFLPA 66

Query: 318 AGLLLFEATKIGQKSRLEAKSERGGMTSPKL-DDSKLGNVKESGLDNKPDGNLNRLDPVT 377
           A LL+FEAT+IG+K  L   SE   +  P L  + +L  +KE   + K D NLNRLDP T
Sbjct: 67  AVLLIFEATRIGRKPGLVVNSEINEVKKPNLLGNLELSKLKELSQEKKIDSNLNRLDPTT 126

Query: 378 RMVAGVRERCLKLLPPKELEQLDIPVREGS-PVPEIDVNYITDSDSSLFVDKSSLSRQSM 437
            +V GVRERCLKLLP +ELE LDIPV E S   P   + YI+D ++     +S+LS Q  
Sbjct: 127 HVVGGVRERCLKLLPAEELEHLDIPVDEESISKPVKRLVYISDHETPFGGGESTLSWQRT 186

Query: 438 NATRFNLFTGYQTLDQREKSFKVNGTVEVHCGFYSDDGGFRISNEDRTFMQTCTLVVSTC 497
           N TRFNLFTG QTLD+RE SFKVN T  VHCGF+S++GGF+IS++D+++MQTC +VVSTC
Sbjct: 187 NGTRFNLFTGNQTLDEREASFKVNETAVVHCGFFSENGGFKISDKDKSYMQTCKVVVSTC 246

Query: 498 AFGGGDDLYQPIGMSEASLRKVCYVAFWDEITLSAQESVGHVIGDDGFIGKWRVVVVKDL 557
           AFGGGDDLYQPIGMSEASL+KVCYVAFWDEITLSAQES G+ IG+DGFIGKWR+V+V++L
Sbjct: 247 AFGGGDDLYQPIGMSEASLKKVCYVAFWDEITLSAQESQGNKIGEDGFIGKWRIVIVQNL 306

Query: 558 PFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHG 617
           PF DQRLNGKIPKML HRLFPN KYSIWVDSKSQFRRDPLGV EALLWR NS LAIS+HG
Sbjct: 307 PFVDQRLNGKIPKMLPHRLFPNSKYSIWVDSKSQFRRDPLGVLEALLWRRNSMLAISEHG 366

Query: 618 ARSSVYDEAGAVVKKHKATPEEVDVQIKRYRYDHFPDDKRFNGHKALAEASVIVREHSPV 677
           ARSSVYDEA AVVKKHKATP+EV+VQI +YR+D  P+DKRFNG KAL EASVIVR+HSP+
Sbjct: 367 ARSSVYDEAKAVVKKHKATPKEVEVQITQYRHDGLPEDKRFNGKKALNEASVIVRKHSPL 426

Query: 678 VNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKDLVNSMGHIRKAKPL 735
            NL MCLWFNEVVRFTSRDQLSFPYVLWRLKV+K INMFPVC RKDLVNSMGHIRKAKPL
Sbjct: 427 TNLLMCLWFNEVVRFTSRDQLSFPYVLWRLKVLKNINMFPVCTRKDLVNSMGHIRKAKPL 486

[Close]

BLAST of Lsi04G016340 vs. TrEMBL
Match: V4T9J0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003605mg PE=4 SV=1)

HSP 1 Score: 665.6 bits (1716), Expect = 6.9e-188
Identity = 332/477 (69.60%), Postives = 385/477 (80.71%), Query Frame = 1


Query: 258 NSNSVSIPVSDNELDELERMRVRVRRKRKKQGNRVKNELAPRVFRMMLKYWLVVFFLLAA 317
           N + VSIP+SD++ DEL RMRVRVRRKRKK  +RV NEL  RV R  +KYW+V+  + A 
Sbjct: 7   NDSGVSIPISDDDSDELGRMRVRVRRKRKKSLHRVNNELTRRVVRFFMKYWMVLVLVFAI 66

Query: 318 GLLLFEATKIGQKSRLEAKSERGGMTSPKLDDSKLGNVKESGLDNKPDGNLNRLDPVTRM 377
           GLL+FEAT+IG+K  +  K+E+G +TS      +L   K    D K D  LNRLDPV ++
Sbjct: 67  GLLVFEATRIGRKPSMIVKTEQGKVTS------QLKEFKRPIPDKKSDSTLNRLDPVMKI 126

Query: 378 VAGVRERCLKLLPPKELEQLDIPVREGSPVPEIDVNYITDSDSSLFVDKSSLSRQSMNAT 437
           V GV+E CLK+L P ELE LD+P+ + S  P   V Y++ +D       S+LS+Q    T
Sbjct: 127 VHGVKEPCLKMLRPDELENLDLPMNKESSSPIKKVVYLSGNDLPYVGGNSTLSQQPREGT 186

Query: 438 RFNLFTGYQTLDQREKSFKVNGTVEVHCGFYSDDGGFRISNEDRTFMQTCTLVVSTCAFG 497
           RFNLFTG QT DQRE+SFKV  T E+HCGFYS+ GGFRIS+ED+ +MQ C  VVSTCAFG
Sbjct: 187 RFNLFTGIQTFDQREESFKVKETAEIHCGFYSERGGFRISDEDKIYMQNCKFVVSTCAFG 246

Query: 498 GGDDLYQPIGMSEASLRKVCYVAFWDEITLSAQESVGHVIGDDGFIGKWRVVVVKDLPFA 557
           GGDDLYQPIGMSEASLRKVCYVAFWDE+T +AQES GH IGDDGFIGKWR+VVVKDLPF 
Sbjct: 247 GGDDLYQPIGMSEASLRKVCYVAFWDEVTRAAQESEGHNIGDDGFIGKWRIVVVKDLPFT 306

Query: 558 DQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHGARS 617
           DQRLNGKIPKML HRLFP VK+SIWVDSKSQFRRDPLGV EALLWR+NS LAIS+HGARS
Sbjct: 307 DQRLNGKIPKMLAHRLFPQVKFSIWVDSKSQFRRDPLGVLEALLWRTNSVLAISEHGARS 366

Query: 618 SVYDEAGAVVKKHKATPEEVDVQIKRYRYDHFPDDKRFNGHKALAEASVIVREHSPVVNL 677
           SVYDEA AVV+K+KATPEEV+VQ+ +YR+D  P+DKRFNG KAL EASVIVREH PV N+
Sbjct: 367 SVYDEAKAVVRKNKATPEEVEVQLTQYRHDGLPEDKRFNGKKALNEASVIVREHLPVTNM 426

Query: 678 FMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKDLVNSMGHIRKAKPL 735
            MCLWFNEVVRFTSRDQLSFPYVLWRLKV +KINMFPVCIRKDLVN++GH+RKAKPL
Sbjct: 427 LMCLWFNEVVRFTSRDQLSFPYVLWRLKVHEKINMFPVCIRKDLVNTIGHVRKAKPL 477

[Close]

BLAST of Lsi04G016340 vs. TrEMBL
Match: B9GPI5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15090g PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 2.0e-187
Identity = 335/490 (68.37%), Postives = 394/490 (80.41%), Query Frame = 1


Query: 255 MSNNSNSVSIPVSDNE-LDELERMRVRVRRKRKKQGNRVKNELAPRVFRMMLKYWLVVFF 314
           + +NS+S+SI V+D++  DEL RMR RVRRKRKK  +R KN  + R+ R +LKYW ++ F
Sbjct: 6   LPSNSSSISISVADDDDSDELSRMRARVRRKRKKHHHRFKNNFSQRIIRFVLKYWTLLIF 65

Query: 315 LLAAGLLLFEATKIGQKSRLEAKSERGGMTSPKLDDSKLGN----VKESGL-----DNKP 374
           L AAGLL+FEA+KIG+K              P LDD+K+      V++        +NK 
Sbjct: 66  LPAAGLLIFEASKIGRK--------------PSLDDAKVSEQVIEVRKPSFQADLNNNKS 125

Query: 375 DGNLNRLDPVTRMVAGVRERCLKLLPPKELEQLDIPVREGSPVPEIDVNYITDSDSSLFV 434
            GNLNRLDPVT +V GVRERCLKLLP +EL+ LDIP+ +    P  +V YI++ D+    
Sbjct: 126 GGNLNRLDPVTHIVGGVRERCLKLLPYEELQHLDIPIHDNFSGPVKNVVYISEKDTRHIG 185

Query: 435 DKSSLSRQSMNATRFNLFTGYQTLDQREKSFKVNGTVEVHCGFYSDDGGFRISNEDRTFM 494
              +LS Q    TRFNLFTG+QT DQRE+SFKVN T E+HCGFY+++GGF+IS+EDR++M
Sbjct: 186 GNITLSGQHTEGTRFNLFTGHQTFDQRERSFKVNETAELHCGFYNENGGFKISDEDRSYM 245

Query: 495 QTCTLVVSTCAFGGGDDLYQPIGMSEASLRKVCYVAFWDEITLSAQESVGHVIGDDGFIG 554
           QTC +VVSTCAFGGGDDL+QPIGMSEA+L KVCYVAFWDEITL+AQES GH IG+D FIG
Sbjct: 246 QTCKVVVSTCAFGGGDDLHQPIGMSEATLEKVCYVAFWDEITLAAQESQGHRIGEDHFIG 305

Query: 555 KWRVVVVKDLPFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRS 614
           KWRVVVV+DLPFADQRLNGKIPKMLGHRLFP  KYSIWVDSKSQFRRDPLGV EALLWRS
Sbjct: 306 KWRVVVVRDLPFADQRLNGKIPKMLGHRLFPQAKYSIWVDSKSQFRRDPLGVLEALLWRS 365

Query: 615 NSELAISQHGARSSVYDEAGAVVKKHKATPEEVDVQIKRYRYDHFPDDKRFNGHKALAEA 674
           NS LAIS+HGARSSVYDEA AVVKKHKATPEEV+VQI +YR+D  P+DKR  G KAL EA
Sbjct: 366 NSVLAISEHGARSSVYDEAKAVVKKHKATPEEVEVQITQYRHDGLPEDKRLYGKKALNEA 425

Query: 675 SVIVREHSPVVNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKDLVNS 734
           S+IVREH+P+ NLFMCLWFNEVVRFTSRDQ+SFPYVLWRLKV+K I+ FPVCIRKDLVNS
Sbjct: 426 SIIVREHTPLTNLFMCLWFNEVVRFTSRDQMSFPYVLWRLKVLKDIHRFPVCIRKDLVNS 481

[Close]

BLAST of Lsi04G016340 vs. TAIR10
Match: AT5G42660.1 (AT5G42660.1 Protein of unknown function (DUF616))

HSP 1 Score: 630.2 bits (1624), Expect = 1.6e-180
Identity = 312/477 (65.41%), Postives = 376/477 (78.83%), Query Frame = 1


Query: 258 NSNSVSIPVSDNELDELERMRVRVRRKRKKQGNRVKNELAPRVFRMMLKYWLVVFFLLAA 317
           N+NSVSI VSD+E ++L R+R R RRKRKK  +R   EL   V R+ ++YW+V+ FLLA 
Sbjct: 3   NNNSVSISVSDDESNDLNRIRARTRRKRKKVSHRTSYELPRHVLRLFVRYWVVLVFLLAV 62

Query: 318 GLLLFEATKIGQKSRLEAKSERGGMTSPKLDDSKLGNVKESGLDNKPDGNLNRLDPVTRM 377
           GLL+FE+T+IG KS    K +  G  SP                 K +GNLNRLDP T++
Sbjct: 63  GLLVFESTRIGFKSSDLKKPDLNGKESPS---------------KKNEGNLNRLDPTTKV 122

Query: 378 VAGVRERCLKLLPPKELEQLDIPVREGSPVPEIDVNYITDSDSSLFVDKSSLSRQSMNAT 437
           + GVR+RCLKLLPP+ELE LDI  R+ S  P   V Y+TD+D S+      +     N T
Sbjct: 123 IGGVRQRCLKLLPPEELEHLDILERKDSGSPVKRVVYLTDTDVSV----GEMRGVRGNGT 182

Query: 438 RFNLFTGYQTLDQREKSFKVNGTVEVHCGFYSDDGGFRISNEDRTFMQTCTLVVSTCAFG 497
           RFNLFTG QT  +RE SF+V  TV +HCGF++++GGFRIS++D+ FM +C +VVSTCAFG
Sbjct: 183 RFNLFTGNQTFAERENSFQVRETVSLHCGFFNENGGFRISDKDKKFMTSCEVVVSTCAFG 242

Query: 498 GGDDLYQPIGMSEASLRKVCYVAFWDEITLSAQESVGHVIGDDGFIGKWRVVVVKDLPFA 557
           GGD+LY+PIGMS+ S +KVCYVAFWDE+TL+ QE+ GH I ++  IGKWR+V+VKDLPF 
Sbjct: 243 GGDNLYEPIGMSKTSSQKVCYVAFWDEVTLTTQEAEGHKIDENDHIGKWRIVIVKDLPFT 302

Query: 558 DQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHGARS 617
           DQRLNGKIPKML HRLFP+ KYSIWVDSKSQFRRDPLGV +ALLWR+NS LAIS+HGARS
Sbjct: 303 DQRLNGKIPKMLAHRLFPDAKYSIWVDSKSQFRRDPLGVLDALLWRTNSVLAISEHGARS 362

Query: 618 SVYDEAGAVVKKHKATPEEVDVQIKRYRYDHFPDDKRFNGHKALAEASVIVREHSPVVNL 677
           SVYDEA AV+KKHKATPEEV+VQI +YR+D  P+DKRFNG KAL+EASVIVREH+P+ NL
Sbjct: 363 SVYDEANAVIKKHKATPEEVEVQINQYRHDKLPEDKRFNGKKALSEASVIVREHTPLTNL 422

Query: 678 FMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKDLVNSMGHIRKAKPL 735
           FMCLWFNEVVRFTSRDQLSFPYVLWRLKV+K INMFPVC RKDLVNS+GH+RKAKPL
Sbjct: 423 FMCLWFNEVVRFTSRDQLSFPYVLWRLKVLKNINMFPVCTRKDLVNSIGHVRKAKPL 460

[Close]

BLAST of Lsi04G016340 vs. TAIR10
Match: AT1G74970.1 (AT1G74970.1 ribosomal protein S9)

HSP 1 Score: 270.4 bits (690), Expect = 3.3e-72
Identity = 147/206 (71.36%), Postives = 174/206 (84.47%), Query Frame = 1


Query: 4   SISSLAFSLSSLSFSSQVSQKPNALSFPRSKSLLISP--SCSNSPLVVSASAAAGVET-- 63
           SI++LA SLSSLSFSSQVSQ+PN +SFPR+ S+   P  S   + L ++A+ +A  E   
Sbjct: 3   SITNLASSLSSLSFSSQVSQRPNTISFPRANSVFALPAKSARRASLSITATVSAPPEEEE 62

Query: 64  -ADLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLW 123
             +L+ +VKS LPGGFAAQ + GTGRRK A+ARVVL+EGTGKVIINYRDAKEYLQGNPLW
Sbjct: 63  IVELKKYVKSRLPGGFAAQKIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLW 122

Query: 124 LQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLL 183
           LQYVKVPLVTLGYE+SYD+FVKA GGGLSGQAQAI+LG+ARALLKVS DHRSPLKKEGLL
Sbjct: 123 LQYVKVPLVTLGYENSYDIFVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLL 182

Query: 184 TRDSRVVERKKAGLKKAQNGTKLNRK 205
           TRD+RVVERKKAGLKKA+   + +++
Sbjct: 183 TRDARVVERKKAGLKKARKAPQFSKR 208

[Close]

BLAST of Lsi04G016340 vs. TAIR10
Match: AT2G02910.1 (AT2G02910.1 Protein of unknown function (DUF616))

HSP 1 Score: 246.9 bits (629), Expect = 3.9e-65
Identity = 140/324 (43.21%), Postives = 183/324 (56.48%), Query Frame = 1


Query: 434 MNATRFNL------------FTGYQTLDQREKSFK-VNGTVEVHCGFYSDDGGFRISNED 493
           +N TRF+L            F G+QTL +RE+S+  VN T+  HCGF    G F +S +D
Sbjct: 135 LNFTRFSLGFVETETYDNPRFGGHQTLSERERSYSAVNQTI--HCGFVKGTG-FDLSEKD 194

Query: 494 RTFMQTCTLVVSTCAFGGGDDLYQPIG--MSEASLRKVCYVAFWDEITLSAQESVGHVIG 553
           R +M+ C + VS+C FG  D L +P    +SE S R VC+V F DE TLS   S GHV  
Sbjct: 195 RAYMKNCVVSVSSCIFGSSDFLRRPATKKISEFSKRNVCFVMFVDEQTLSKLASEGHVPD 254

Query: 554 DDGFIGKWRVVVVKDLPFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFE 613
             GF+G W+ VVV +LP+ D R  GK+PK L HRLFP+ +YSIW+DSK +   DP+ + +
Sbjct: 255 KQGFVGLWKTVVVSNLPYNDMRKTGKVPKFLSHRLFPSSRYSIWLDSKMRLTTDPMLIID 314

Query: 614 ALLWRSNSELAISQHGARSSVYDEAGAVVKKHKATPEEVDVQIKRYRYDHF----PDDKR 673
             LWR+ SE AIS H  R  V+DE     + +K     +D Q   YR D      P D  
Sbjct: 315 FFLWRTKSEFAISNHYDRHCVWDEVLQNKRLNKYNHSAIDEQFMFYRSDGLKKFDPSDPN 374

Query: 674 FNGHKALAEASVIVREHSPVVNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVK-----K 733
                 + E S IVR H+P+ NLF CLWFNEV RFTSRDQLSF Y   +L+ +      +
Sbjct: 375 SPLPSYVPEGSFIVRAHTPMSNLFTCLWFNEVDRFTSRDQLSFAYTYLKLQRLNSDRPLR 434

[Close]

BLAST of Lsi04G016340 vs. TAIR10
Match: AT1G34550.1 (AT1G34550.1 Protein of unknown function (DUF616))

HSP 1 Score: 230.3 bits (586), Expect = 3.8e-60
Identity = 125/305 (40.98%), Postives = 171/305 (56.07%), Query Frame = 1


Query: 442 FTGYQTLDQREKSFKVNGTVEVHCGFY-----SDDGGFRISNEDRTFMQTCTLVVSTCAF 501
           F G+Q+L +RE SF V    ++HCGF      S   GF ++ +D  ++  C + VS+C F
Sbjct: 421 FAGHQSLQEREDSF-VAQDKKIHCGFVKGPKGSSSTGFDLTEDDTNYISRCHIAVSSCIF 480

Query: 502 GGGDDLYQPIG--MSEASLRKVCYVAFWDEITLSAQESVGHVIGDDGFIGKWRVVVVKDL 561
           G  D L  P    +S  S + VC++ F DEIT+    + GH     GFIG W++VVVK+L
Sbjct: 481 GNSDRLRPPANKMISRLSRKNVCFIVFVDEITMQTLSAEGHAPDRAGFIGLWKLVVVKNL 540

Query: 562 PFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHG 621
           P+AD R  GKIPKML HRLFP+ +YSIW+DSK + + DPL + E  LWR   E AIS H 
Sbjct: 541 PYADMRRVGKIPKMLPHRLFPSARYSIWLDSKLRLQLDPLLILEYFLWRKGHEYAISNHY 600

Query: 622 ARSSVYDEAGAVVKKHKATPEEVDVQIKRYRYDHFPDDKRFNGH-------KALAEASVI 681
            R  +++E     K +K     ++ Q + Y+ D      RFN           + E S I
Sbjct: 601 DRHCLWEEVAQNKKLNKYNHTVINQQFQFYKADGL---TRFNASDPFKLLPSNVPEGSFI 660

Query: 682 VREHSPVVNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVK-----KINMFPVCIRKDLV 728
           VR H+P+ NLF CLWFNEV RFT RDQLSF Y   +L+ +       ++MF  C R+ + 
Sbjct: 661 VRAHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLRRMNPDKPFNLHMFKDCERRKIA 720

[Close]

BLAST of Lsi04G016340 vs. TAIR10
Match: AT4G09630.1 (AT4G09630.1 Protein of unknown function (DUF616))

HSP 1 Score: 225.3 bits (573), Expect = 1.2e-58
Identity = 122/307 (39.74%), Postives = 169/307 (55.05%), Query Frame = 1


Query: 442 FTGYQTLDQREKSFKVNGTVEVHCGFYS-----DDGGFRISNEDRTFMQTCTLVVSTCAF 501
           F G+Q+L +RE SF V    ++HCGF          GF ++ +D  ++  C + V +C F
Sbjct: 396 FAGHQSLQEREDSFLVQEQ-KIHCGFVKAPEGLPSTGFDLTEDDANYISKCHIAVISCIF 455

Query: 502 GGGDDLYQPIG--MSEASLRKVCYVAFWDEITLSAQESVGHVIGDDGFIGKWRVVVVKDL 561
           G  D L  P    +S  S + VC+V F DEIT+    + G V    GF+G W++VVV++L
Sbjct: 456 GNSDRLRHPANKMVSSLSRKDVCFVVFVDEITMQTLSAEGQVPDGAGFVGLWKLVVVRNL 515

Query: 562 PFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHG 621
           P+ D R  GKIPK+L HRLF + +YSIW+DSK + + DPL + E  LWR   E AIS H 
Sbjct: 516 PYTDMRRVGKIPKLLPHRLFTSARYSIWLDSKLRLQLDPLVILEYFLWREGHEYAISNHY 575

Query: 622 ARSSVYDEAGAVVKKHKATPEEVDVQIKRYRYDHFPDDKRFNGHKAL----AEASVIVRE 681
            R  +++E     K +K     +D Q + Y+ D        + HK L     E S IVRE
Sbjct: 576 DRHCLWEEVAQNKKLNKYNHTVIDQQFEFYQSDGLTRFNASDPHKLLPSNVPEGSFIVRE 635

Query: 682 HSPVVNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVK-----KINMFPVCIRKDLVNSM 733
           H+P+ NLF CLWFNEV RFT RDQLSF Y   +L  +       ++MF  C R+ +    
Sbjct: 636 HTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLTRMNPDTPFNLHMFKDCERRKITKLF 695

[Close]

BLAST of Lsi04G016340 vs. NCBI nr
Match: gi|659133242|ref|XP_008466628.1| (PREDICTED: uncharacterized protein LOC103503985 isoform X3 [Cucumis melo])

HSP 1 Score: 894.0 bits (2309), Expect = 1.7e-256
Identity = 443/486 (91.15%), Postives = 463/486 (95.27%), Query Frame = 1


Query: 255 MSNNSNSVSIPVSDNELDELERMRVRVRRKRKKQGNRVKNELAPRVFRMMLKYWLVVFFL 314
           MSNNSNSVSIPVSDNELD++ERMRVRVRRKRKKQGNRV NELAPRVF+MMLKYWLVVFFL
Sbjct: 1   MSNNSNSVSIPVSDNELDDMERMRVRVRRKRKKQGNRVNNELAPRVFKMMLKYWLVVFFL 60

Query: 315 LAAGLLLFEATKIGQKSRLEAKSERGGMTSPKLDDSKLGNVKESGLDNKPDGNLNRLDPV 374
           LAAGLLLFEATKIGQ SRLE KSE    T+PKLDDSKL  VKESGLD KPDGNLNRLDPV
Sbjct: 61  LAAGLLLFEATKIGQNSRLETKSEFAATTTPKLDDSKLETVKESGLDKKPDGNLNRLDPV 120

Query: 375 TRMVAGVRERCLKLLPPKELEQLDIPVREGSPVPEIDVNYITDSDSSLFVDKSSLSRQSM 434
           TRMV GVRERCLK+LPPKELEQLDIPV EGSPVPEIDVNYI+DSD+SL VDK+S SRQSM
Sbjct: 121 TRMVNGVRERCLKILPPKELEQLDIPVLEGSPVPEIDVNYISDSDNSLSVDKTSFSRQSM 180

Query: 435 NATRFNLFTGYQTLDQREKSFKVNGTVEVHCGFYSDDGGFRISNEDRTFMQTCTLVVSTC 494
           N+TRFNLFTGYQTL+QRE S+KVN TVEVHCGFYSDDGGF+ISNED+TFM+TCT VVSTC
Sbjct: 181 NSTRFNLFTGYQTLEQRENSYKVNRTVEVHCGFYSDDGGFKISNEDKTFMRTCTSVVSTC 240

Query: 495 AFGGGDDLYQPIGMSEASLRKVCYVAFWDEITLSAQESVGHVIGDDGFIGKWRVVVVKDL 554
           AFGGGDDLYQPIGMSEASLRKVCYVAFWDE+TLS QES G VIG+ GFIGKWRVVVV+DL
Sbjct: 241 AFGGGDDLYQPIGMSEASLRKVCYVAFWDEVTLSVQESAGRVIGEGGFIGKWRVVVVRDL 300

Query: 555 PFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHG 614
           PFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHG
Sbjct: 301 PFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHG 360

Query: 615 ARSSVYDEAGAVVKKHKATPEEVDVQIKRYRYDHFPDDKRFNGHKALAEASVIVREHSPV 674
           ARSSVYDEAGAVVKKHKATPEEVDVQIK+YR+D FPDDKRFNGHKALAEASVIVR+HSPV
Sbjct: 361 ARSSVYDEAGAVVKKHKATPEEVDVQIKQYRHDQFPDDKRFNGHKALAEASVIVRKHSPV 420

Query: 675 VNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKDLVNSMGHIRKAKPL 734
           VNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKDLVNSMGHI KAKPL
Sbjct: 421 VNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKDLVNSMGHISKAKPL 480

Query: 735 NVSRLS 741
           NVSRLS
Sbjct: 481 NVSRLS 486

[Close]

BLAST of Lsi04G016340 vs. NCBI nr
Match: gi|659133238|ref|XP_008466626.1| (PREDICTED: uncharacterized protein LOC103503985 isoform X1 [Cucumis melo])

HSP 1 Score: 884.4 bits (2284), Expect = 1.4e-253
Identity = 443/500 (88.60%), Postives = 463/500 (92.60%), Query Frame = 1


Query: 255 MSNNSNSVSIPVSDNELDELERMRVRVRRKRKKQGNRVKNELAPRVFRMMLKYWLVVFFL 314
           MSNNSNSVSIPVSDNELD++ERMRVRVRRKRKKQGNRV NELAPRVF+MMLKYWLVVFFL
Sbjct: 1   MSNNSNSVSIPVSDNELDDMERMRVRVRRKRKKQGNRVNNELAPRVFKMMLKYWLVVFFL 60

Query: 315 LAAGLLLFEATKIGQKSRLEAKSERGGMTSPKLDDSKLGNVKESGLDNKPDGNLNRLDPV 374
           LAAGLLLFEATKIGQ SRLE KSE    T+PKLDDSKL  VKESGLD KPDGNLNRLDPV
Sbjct: 61  LAAGLLLFEATKIGQNSRLETKSEFAATTTPKLDDSKLETVKESGLDKKPDGNLNRLDPV 120

Query: 375 TRMVAGVRERCLKLLPPKELEQLDIPVREGSPVPEIDVNYITDSDSSLFVDKSSLSRQSM 434
           TRMV GVRERCLK+LPPKELEQLDIPV EGSPVPEIDVNYI+DSD+SL VDK+S SRQSM
Sbjct: 121 TRMVNGVRERCLKILPPKELEQLDIPVLEGSPVPEIDVNYISDSDNSLSVDKTSFSRQSM 180

Query: 435 NATRFNLFTGYQTLDQREKSFK--------------VNGTVEVHCGFYSDDGGFRISNED 494
           N+TRFNLFTGYQTL+QRE S+K              VN TVEVHCGFYSDDGGF+ISNED
Sbjct: 181 NSTRFNLFTGYQTLEQRENSYKSWWLSTSSRNSLVQVNRTVEVHCGFYSDDGGFKISNED 240

Query: 495 RTFMQTCTLVVSTCAFGGGDDLYQPIGMSEASLRKVCYVAFWDEITLSAQESVGHVIGDD 554
           +TFM+TCT VVSTCAFGGGDDLYQPIGMSEASLRKVCYVAFWDE+TLS QES G VIG+ 
Sbjct: 241 KTFMRTCTSVVSTCAFGGGDDLYQPIGMSEASLRKVCYVAFWDEVTLSVQESAGRVIGEG 300

Query: 555 GFIGKWRVVVVKDLPFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEAL 614
           GFIGKWRVVVV+DLPFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEAL
Sbjct: 301 GFIGKWRVVVVRDLPFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEAL 360

Query: 615 LWRSNSELAISQHGARSSVYDEAGAVVKKHKATPEEVDVQIKRYRYDHFPDDKRFNGHKA 674
           LWRSNSELAISQHGARSSVYDEAGAVVKKHKATPEEVDVQIK+YR+D FPDDKRFNGHKA
Sbjct: 361 LWRSNSELAISQHGARSSVYDEAGAVVKKHKATPEEVDVQIKQYRHDQFPDDKRFNGHKA 420

Query: 675 LAEASVIVREHSPVVNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKD 734
           LAEASVIVR+HSPVVNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKD
Sbjct: 421 LAEASVIVRKHSPVVNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKD 480

Query: 735 LVNSMGHIRKAKPLNVSRLS 741
           LVNSMGHI KAKPLNVSRLS
Sbjct: 481 LVNSMGHISKAKPLNVSRLS 500

[Close]

BLAST of Lsi04G016340 vs. NCBI nr
Match: gi|659133244|ref|XP_008466629.1| (PREDICTED: uncharacterized protein LOC103503985 isoform X4 [Cucumis melo])

HSP 1 Score: 870.9 bits (2249), Expect = 1.6e-249
Identity = 435/486 (89.51%), Postives = 454/486 (93.42%), Query Frame = 1


Query: 255 MSNNSNSVSIPVSDNELDELERMRVRVRRKRKKQGNRVKNELAPRVFRMMLKYWLVVFFL 314
           MSNNSNSVSIPVSDNELD++ERMRVRVRRKRKKQGNRV NELAPRVF+MMLKYWLVVFFL
Sbjct: 1   MSNNSNSVSIPVSDNELDDMERMRVRVRRKRKKQGNRVNNELAPRVFKMMLKYWLVVFFL 60

Query: 315 LAAGLLLFEATKIGQKSRLEAKSERGGMTSPKLDDSKLGNVKESGLDNKPDGNLNRLDPV 374
           LAAGLLLFEATKIGQ SRLE KSE             L  VKESGLD KPDGNLNRLDPV
Sbjct: 61  LAAGLLLFEATKIGQNSRLETKSE-------------LETVKESGLDKKPDGNLNRLDPV 120

Query: 375 TRMVAGVRERCLKLLPPKELEQLDIPVREGSPVPEIDVNYITDSDSSLFVDKSSLSRQSM 434
           TRMV GVRERCLK+LPPKELEQLDIPV EGSPVPEIDVNYI+DSD+SL VDK+S SRQSM
Sbjct: 121 TRMVNGVRERCLKILPPKELEQLDIPVLEGSPVPEIDVNYISDSDNSLSVDKTSFSRQSM 180

Query: 435 NATRFNLFTGYQTLDQREKSFKVNGTVEVHCGFYSDDGGFRISNEDRTFMQTCTLVVSTC 494
           N+TRFNLFTGYQTL+QRE S+KVN TVEVHCGFYSDDGGF+ISNED+TFM+TCT VVSTC
Sbjct: 181 NSTRFNLFTGYQTLEQRENSYKVNRTVEVHCGFYSDDGGFKISNEDKTFMRTCTSVVSTC 240

Query: 495 AFGGGDDLYQPIGMSEASLRKVCYVAFWDEITLSAQESVGHVIGDDGFIGKWRVVVVKDL 554
           AFGGGDDLYQPIGMSEASLRKVCYVAFWDE+TLS QES G VIG+ GFIGKWRVVVV+DL
Sbjct: 241 AFGGGDDLYQPIGMSEASLRKVCYVAFWDEVTLSVQESAGRVIGEGGFIGKWRVVVVRDL 300

Query: 555 PFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHG 614
           PFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHG
Sbjct: 301 PFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHG 360

Query: 615 ARSSVYDEAGAVVKKHKATPEEVDVQIKRYRYDHFPDDKRFNGHKALAEASVIVREHSPV 674
           ARSSVYDEAGAVVKKHKATPEEVDVQIK+YR+D FPDDKRFNGHKALAEASVIVR+HSPV
Sbjct: 361 ARSSVYDEAGAVVKKHKATPEEVDVQIKQYRHDQFPDDKRFNGHKALAEASVIVRKHSPV 420

Query: 675 VNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKDLVNSMGHIRKAKPL 734
           VNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKDLVNSMGHI KAKPL
Sbjct: 421 VNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKDLVNSMGHISKAKPL 473

Query: 735 NVSRLS 741
           NVSRLS
Sbjct: 481 NVSRLS 473

[Close]

BLAST of Lsi04G016340 vs. NCBI nr
Match: gi|659133240|ref|XP_008466627.1| (PREDICTED: uncharacterized protein LOC103503985 isoform X2 [Cucumis melo])

HSP 1 Score: 861.3 bits (2224), Expect = 1.2e-246
Identity = 435/500 (87.00%), Postives = 454/500 (90.80%), Query Frame = 1


Query: 255 MSNNSNSVSIPVSDNELDELERMRVRVRRKRKKQGNRVKNELAPRVFRMMLKYWLVVFFL 314
           MSNNSNSVSIPVSDNELD++ERMRVRVRRKRKKQGNRV NELAPRVF+MMLKYWLVVFFL
Sbjct: 1   MSNNSNSVSIPVSDNELDDMERMRVRVRRKRKKQGNRVNNELAPRVFKMMLKYWLVVFFL 60

Query: 315 LAAGLLLFEATKIGQKSRLEAKSERGGMTSPKLDDSKLGNVKESGLDNKPDGNLNRLDPV 374
           LAAGLLLFEATKIGQ SRLE KSE             L  VKESGLD KPDGNLNRLDPV
Sbjct: 61  LAAGLLLFEATKIGQNSRLETKSE-------------LETVKESGLDKKPDGNLNRLDPV 120

Query: 375 TRMVAGVRERCLKLLPPKELEQLDIPVREGSPVPEIDVNYITDSDSSLFVDKSSLSRQSM 434
           TRMV GVRERCLK+LPPKELEQLDIPV EGSPVPEIDVNYI+DSD+SL VDK+S SRQSM
Sbjct: 121 TRMVNGVRERCLKILPPKELEQLDIPVLEGSPVPEIDVNYISDSDNSLSVDKTSFSRQSM 180

Query: 435 NATRFNLFTGYQTLDQREKSFK--------------VNGTVEVHCGFYSDDGGFRISNED 494
           N+TRFNLFTGYQTL+QRE S+K              VN TVEVHCGFYSDDGGF+ISNED
Sbjct: 181 NSTRFNLFTGYQTLEQRENSYKSWWLSTSSRNSLVQVNRTVEVHCGFYSDDGGFKISNED 240

Query: 495 RTFMQTCTLVVSTCAFGGGDDLYQPIGMSEASLRKVCYVAFWDEITLSAQESVGHVIGDD 554
           +TFM+TCT VVSTCAFGGGDDLYQPIGMSEASLRKVCYVAFWDE+TLS QES G VIG+ 
Sbjct: 241 KTFMRTCTSVVSTCAFGGGDDLYQPIGMSEASLRKVCYVAFWDEVTLSVQESAGRVIGEG 300

Query: 555 GFIGKWRVVVVKDLPFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEAL 614
           GFIGKWRVVVV+DLPFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEAL
Sbjct: 301 GFIGKWRVVVVRDLPFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEAL 360

Query: 615 LWRSNSELAISQHGARSSVYDEAGAVVKKHKATPEEVDVQIKRYRYDHFPDDKRFNGHKA 674
           LWRSNSELAISQHGARSSVYDEAGAVVKKHKATPEEVDVQIK+YR+D FPDDKRFNGHKA
Sbjct: 361 LWRSNSELAISQHGARSSVYDEAGAVVKKHKATPEEVDVQIKQYRHDQFPDDKRFNGHKA 420

Query: 675 LAEASVIVREHSPVVNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKD 734
           LAEASVIVR+HSPVVNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKD
Sbjct: 421 LAEASVIVRKHSPVVNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKD 480

Query: 735 LVNSMGHIRKAKPLNVSRLS 741
           LVNSMGHI KAKPLNVSRLS
Sbjct: 481 LVNSMGHISKAKPLNVSRLS 487

[Close]

BLAST of Lsi04G016340 vs. NCBI nr
Match: gi|449460127|ref|XP_004147797.1| (PREDICTED: uncharacterized protein LOC101206879 isoform X1 [Cucumis sativus])

HSP 1 Score: 855.5 bits (2209), Expect = 6.8e-245
Identity = 428/486 (88.07%), Postives = 449/486 (92.39%), Query Frame = 1


Query: 255 MSNNSNSVSIPVSDNELDELERMRVRVRRKRKKQGNRVKNELAPRVFRMMLKYWLVVFFL 314
           MSNNS+SVSIPVSDNELD++ERMRVRVRRKRKKQGNRV NELAPRVFRMMLKYWLVVFFL
Sbjct: 1   MSNNSSSVSIPVSDNELDDMERMRVRVRRKRKKQGNRVNNELAPRVFRMMLKYWLVVFFL 60

Query: 315 LAAGLLLFEATKIGQKSRLEAKSERGGMTSPKLDDSKLGNVKESGLDNKPDGNLNRLDPV 374
           LAAGLLLFEATKIGQ SRLE KSE             L   KESGLD KPDGNLNRLDPV
Sbjct: 61  LAAGLLLFEATKIGQNSRLETKSE-------------LETDKESGLDKKPDGNLNRLDPV 120

Query: 375 TRMVAGVRERCLKLLPPKELEQLDIPVREGSPVPEIDVNYITDSDSSLFVDKSSLSRQSM 434
           TRMVAGVR+RCLK+LPP ELEQLDIPV E SPV EIDVNYITDSD+SL VDK+  SRQSM
Sbjct: 121 TRMVAGVRKRCLKILPPNELEQLDIPVLEDSPVSEIDVNYITDSDNSLSVDKTYFSRQSM 180

Query: 435 NATRFNLFTGYQTLDQREKSFKVNGTVEVHCGFYSDDGGFRISNEDRTFMQTCTLVVSTC 494
           NATRFNLFTGYQTL+QRE S+KVN T EVHCGFYS+DGGF+ISNED+TFM+TCT VVSTC
Sbjct: 181 NATRFNLFTGYQTLEQRENSYKVNRTAEVHCGFYSNDGGFKISNEDKTFMRTCTFVVSTC 240

Query: 495 AFGGGDDLYQPIGMSEASLRKVCYVAFWDEITLSAQESVGHVIGDDGFIGKWRVVVVKDL 554
           AFGGGDDLYQPIGMSEASLRKVC+VAFWDEITLS QES GHVIG+ GFIGKWRVVVV+DL
Sbjct: 241 AFGGGDDLYQPIGMSEASLRKVCFVAFWDEITLSVQESAGHVIGEGGFIGKWRVVVVRDL 300

Query: 555 PFADQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHG 614
           PF+DQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHG
Sbjct: 301 PFSDQRLNGKIPKMLGHRLFPNVKYSIWVDSKSQFRRDPLGVFEALLWRSNSELAISQHG 360

Query: 615 ARSSVYDEAGAVVKKHKATPEEVDVQIKRYRYDHFPDDKRFNGHKALAEASVIVREHSPV 674
           ARSSVYDEA AVVKKHKATPEEVDVQIK+YR+D FPDDKRFNGHKALAEASVIVREHSPV
Sbjct: 361 ARSSVYDEAEAVVKKHKATPEEVDVQIKQYRHDQFPDDKRFNGHKALAEASVIVREHSPV 420

Query: 675 VNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVVKKINMFPVCIRKDLVNSMGHIRKAKPL 734
           VNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKV+KK+NMFPVCIRKDLVNSMGHI KAKPL
Sbjct: 421 VNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVLKKLNMFPVCIRKDLVNSMGHISKAKPL 473

Query: 735 NVSRLS 741
           NVSRLS
Sbjct: 481 NVSRLS 473

The following BLAST results are available for this feature:

BLAST of Lsi04G016340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RR9_ARATH	5.8e-71	71.36	30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana GN=RPS9 PE=2 SV=...	[more]
RR9_SPIOL	4.8e-65	67.86	30S ribosomal protein S9, chloroplastic (Fragment) OS=Spinacia oleracea GN=PRPS9...	[more]
RS9_THEEB	4.5e-31	57.26	30S ribosomal protein S9 OS=Thermosynechococcus elongatus (strain BP-1) GN=rpsI ...	[more]
RR9_MESVI	1.3e-30	59.68	30S ribosomal protein S9, chloroplastic OS=Mesostigma viride GN=rps9 PE=3 SV=1	[more]
RS9_NOSP7	6.5e-30	54.40	30S ribosomal protein S9 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) G...	[more]

BLAST of Lsi04G016340 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGH2_CUCSA	4.7e-245	88.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G854230 PE=4 SV=1	[more]
M5X0Y6_PRUPE	7.7e-195	71.49	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005010mg PE=4 SV=1	[more]
A0A061FJN2_THECC	2.8e-189	71.04	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_033969 PE=4 SV=1	[more]
V4T9J0_9ROSI	6.9e-188	69.60	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003605mg PE=4 SV=1	[more]
B9GPI5_POPTR	2.0e-187	68.37	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15090g PE=4 SV=1	[more]

BLAST of Lsi04G016340 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G42660.1	1.6e-180	65.41	Protein of unknown function (DUF616)	[more]
AT1G74970.1	3.3e-72	71.36	ribosomal protein S9	[more]
AT2G02910.1	3.9e-65	43.21	Protein of unknown function (DUF616)	[more]
AT1G34550.1	3.8e-60	40.98	Protein of unknown function (DUF616)	[more]
AT4G09630.1	1.2e-58	39.74	Protein of unknown function (DUF616)	[more]

BLAST of Lsi04G016340 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659133242\|ref\|XP_008466628.1\|	1.7e-256	91.15	PREDICTED: uncharacterized protein LOC103503985 isoform X3 [Cucumis melo]	[more]
gi\|659133238\|ref\|XP_008466626.1\|	1.4e-253	88.60	PREDICTED: uncharacterized protein LOC103503985 isoform X1 [Cucumis melo]	[more]
gi\|659133244\|ref\|XP_008466629.1\|	1.6e-249	89.51	PREDICTED: uncharacterized protein LOC103503985 isoform X4 [Cucumis melo]	[more]
gi\|659133240\|ref\|XP_008466627.1\|	1.2e-246	87.00	PREDICTED: uncharacterized protein LOC103503985 isoform X2 [Cucumis melo]	[more]
gi\|449460127\|ref\|XP_004147797.1\|	6.8e-245	88.07	PREDICTED: uncharacterized protein LOC101206879 isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR023035	Ribosomal_S9_bac/plastid
IPR020574	Ribosomal_S9_CS
IPR020568	Ribosomal_S5_D2-typ_fold
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR006852	DUF616
IPR000754	Ribosomal_S9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016020	membrane
cellular_component	GO:0000312	plastid small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G016340.1	Lsi04G016340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000754	Ribosomal protein S9	PFAM	PF00380	Ribosomal_S9	coord: 83..199 score: 2.0
IPR006852	Protein of unknown function DUF616	PFAM	PF04765	DUF616	coord: 432..727 score: 1.8E
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	G3DSA:3.30.230.10		coord: 79..200 score: 1.2
IPR020568	Ribosomal protein S5 domain 2-type fold	unknown	SSF54211	Ribosomal protein S5 domain 2-like	coord: 79..199 score: 7.59
IPR020574	Ribosomal protein S9, conserved site	PROSITE	PS00360	RIBOSOMAL_S9	coord: 143..161 scor
IPR023035	Ribosomal protein S9, bacterial/plastid	HAMAP	MF_00532_B	Ribosomal_S9_B	coord: 74..204 score: 29
None	No IPR available	unknown	Coil	Coil	coord: 271..291 scor
None	No IPR available	PANTHER	PTHR12956	ALKALINE CERAMIDASE-RELATED	coord: 349..734 score: 4.1E-300coord: 244..332 score: 4.1E
None	No IPR available	PANTHER	PTHR12956:SF17	SUBFAMILY NOT NAMED	coord: 349..734 score: 4.1E-300coord: 244..332 score: 4.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G016340	Csa3G854230	Cucumber (Chinese Long) v2	culsiB192
Lsi04G016340	CSPI03G42410	Wild cucumber (PI 183967)	cpilsiB190
Lsi04G016340	Cucsa.342070	Cucumber (Gy14) v1	cgylsiB552
Lsi04G016340	CmaCh01G018850	Cucurbita maxima (Rimu)	cmalsiB424
Lsi04G016340	CmoCh01G019470	Cucurbita moschata (Rifu)	cmolsiB412
Lsi04G016340	Cla020737	Watermelon (97103) v1	lsiwmB316
Lsi04G016340	MELO3C003890	Melon (DHL92) v3.5.1	lsimeB311
Lsi04G016340	ClCG05G019240	Watermelon (Charleston Gray)	lsiwcgB287
Lsi04G016340	MELO3C003890.2	Melon (DHL92) v3.6.1	lsimedB325
Lsi04G016340	Cla97C05G100770	Watermelon (97103) v2	lsiwmbB288
Lsi04G016340	Bhi11G002148	Wax gourd	lsiwgoB346
Lsi04G016340	Cp4.1LG02g07370	Cucurbita pepo (Zucchini)	cpelsiB462
Lsi04G016340	CsGy3G039920	Cucumber (Gy14) v2	cgyblsiB176
Lsi04G016340	Carg17123	Silver-seed gourd	carlsiB863
Lsi04G016340	CsaV3_3G044830	Cucumber (Chinese Long) v3	cuclsiB209

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G016340	Cucurbita maxima (Rimu)	cmalsiB024
Lsi04G016340	Cucurbita moschata (Rifu)	cmolsiB012
Lsi04G016340	Cucurbita pepo (Zucchini)	cpelsiB638
Lsi04G016340	Silver-seed gourd	carlsiB094