Cla97C05G094260 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G094260
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Lipid transfer protein
Location	Cla97Chr05 : 15196082 .. 15197061 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAAAGAAGCGCGATGGCGGCAATGGCAGTAGTACTGGTATTAGCTTGCGGCGCAACCATGGGAATCTCTCAAAATCAGGACACATCGTGTGTGAATAGGTTAGTTCCATGCTTAAATTACTTGAACGGAACTCGAAATCCGCCGGAGAGTTGCTGTAATCCTCTGAGATCGATCATCGATTCCAATCCCGATTGCCTTTGCGGTTTAATTAGCAGAGAAGGAAGCAATCGAGCAGAGGCGGCCGGCATCGATATCAACCAGGCTCAACTCTTGCCCGCTCGATGTGGCCAACATGTCAATCCTCTCTCTTGCCTCACTCCCAATAATGCTGGTAGTTTCTCCACAAAATCAACCATTTCTGGTTAGCTTGTTTATTATTATTTAATTAGGGACCTTTTGTCACAAAGACGTTTATAATTGATTATCTATCCTCAAACTTAAACTTTCTATTTACCTAAAAGAGCACTACCACTAATATATAAACAACACTGTGATAGAAATAGCCATCGCTTTAAAGCTACAATAGATATAGCCAATAAAATGTTGCATCTGACCAAAAAGAAAATTAGACATAGTCAATCATAAAAACACTCGTAAATGAGTCATCTACCTATACTTACTTTGACACTTAATAAATAGATTTTATTTACTATGATATTTGACATTTTGTTGCTTTTTTTTTTTTAATTATTATTATGTTTCATTGATTTTTTTTTTTTTAGTATAATGGAAATGTTAATGTTGAACTCATAAATAAGTGGAAATGTAGAAGAAAATTTAATATTTGGTACCAATTTAGTATTTAAACTTTACCTGAATTTTTGTTTTTTGTTTTTTTGTTTTTCCTTGGATTATATTTTGATTAAATTCTTGGATTTGAAATTGCAGGGTTGCCCTCCATGTCTTCCACTCTACAAGTAATTACACTCGCGATTTCCACAATGGTTATCATGTCTTCAATTCTTCACTTTTAG

mRNA sequence

ATGATGGAAAGAAGCGCGATGGCGGCAATGGCAGTAGTACTGGTATTAGCTTGCGGCGCAACCATGGGAATCTCTCAAAATCAGGACACATCGTGTGTGAATAGGTTAGTTCCATGCTTAAATTACTTGAACGGAACTCGAAATCCGCCGGAGAGTTGCTGTAATCCTCTGAGATCGATCATCGATTCCAATCCCGATTGCCTTTGCGGTTTAATTAGCAGAGAAGGAAGCAATCGAGCAGAGGCGGCCGGCATCGATATCAACCAGGCTCAACTCTTGCCCGCTCGATGTGGCCAACATGTCAATCCTCTCTCTTGCCTCACTCCCAATAATGCTGGGTTGCCCTCCATGTCTTCCACTCTACAAGTAATTACACTCGCGATTTCCACAATGGTTATCATGTCTTCAATTCTTCACTTTTAG

Coding sequence (CDS)

ATGATGGAAAGAAGCGCGATGGCGGCAATGGCAGTAGTACTGGTATTAGCTTGCGGCGCAACCATGGGAATCTCTCAAAATCAGGACACATCGTGTGTGAATAGGTTAGTTCCATGCTTAAATTACTTGAACGGAACTCGAAATCCGCCGGAGAGTTGCTGTAATCCTCTGAGATCGATCATCGATTCCAATCCCGATTGCCTTTGCGGTTTAATTAGCAGAGAAGGAAGCAATCGAGCAGAGGCGGCCGGCATCGATATCAACCAGGCTCAACTCTTGCCCGCTCGATGTGGCCAACATGTCAATCCTCTCTCTTGCCTCACTCCCAATAATGCTGGGTTGCCCTCCATGTCTTCCACTCTACAAGTAATTACACTCGCGATTTCCACAATGGTTATCATGTCTTCAATTCTTCACTTTTAG

Protein sequence

MMERSAMAAMAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCLTPNNAGLPSMSSTLQVITLAISTMVIMSSILHF

Homology

[Close]

BLAST of Cla97C05G094260 vs. NCBI nr
Match: XP_004145619.1 (PREDICTED: lipid transfer-like protein VAS [Cucumis sativus] >KGN57679.1 hypothetical protein Csa_3G250900 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 1.2e-50
Identity = 104/139 (74.82%), Postives = 124/139 (89.21%), Query Frame = 0


Query: 4   RSAMAAMAVVLVLACGATMG-ISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIID 63
           +  +AA  V+++L CG ++G ++Q++DTSCVN L+PCLNY+NGTR+PPESCCNPLRSII+
Sbjct: 9   KKIVAAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCCNPLRSIIN 68

Query: 64  SNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCLTPNN-AGLPSMSSTL 123
           SNP+CLCGLISREGSNRAEAAGIDIN+AQLLPARCG+HVNPLSCL  NN +G PSMS  L
Sbjct: 69  SNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGSPSMSLAL 128

Query: 124 QVITLAISTMVIMSSILHF 141
           QVITLAIST +IMSSILHF
Sbjct: 129 QVITLAISTKLIMSSILHF 147

[Close]

BLAST of Cla97C05G094260 vs. NCBI nr
Match: XP_008449981.1 (PREDICTED: lipid transfer-like protein VAS [Cucumis melo])

HSP 1 Score: 206.8 bits (525), Expect = 4.7e-50
Identity = 105/141 (74.47%), Postives = 125/141 (88.65%), Query Frame = 0


Query: 2   MERSAMAAMAVVLVLACGATMG-ISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSI 61
           M++   AA  V+++L CG ++G ++QN+ TSCVN LVPCLNY+NGTR+PPESCC+PLRSI
Sbjct: 8   MKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESCCSPLRSI 67

Query: 62  IDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCLTPNN-AGLPSMSS 121
           I+SNP+CLCGLISREGSNRAEAAGIDIN+AQLLPARCG+HVNPLSCL  NN +GL S+S 
Sbjct: 68  INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGLVSISL 127

Query: 122 TLQVITLAISTMVIMSSILHF 141
           TLQVITLAIST +IMSSILHF
Sbjct: 128 TLQVITLAISTKLIMSSILHF 148

[Close]

BLAST of Cla97C05G094260 vs. NCBI nr
Match: XP_023528269.1 (lipid transfer-like protein VAS [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173.7 bits (439), Expect = 4.4e-40
Identity = 87/141 (61.70%), Postives = 107/141 (75.89%), Query Frame = 0


Query: 2   MERSAMAAMAVVLVLACGATMGI-SQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSI 61
           ME          L+L   + M    + QDTSC+NRL+PCLNYLNGTR+PP SCCNPL+S+
Sbjct: 1   MEMKPWTGTLTALLLVLASAMAFQGRAQDTSCMNRLIPCLNYLNGTRDPPPSCCNPLKSV 60

Query: 62  IDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCL-TPNNAGLPSMSS 121
           IDSNPDCLC LISR+GS+RAE AGID++QAQLLP RCG+HVNPLSCL   NNA   S+SS
Sbjct: 61  IDSNPDCLCALISRDGSDRAEQAGIDVSQAQLLPGRCGEHVNPLSCLAAANNARSLSISS 120

Query: 122 TLQVITLAISTMVIMSSILHF 141
           TLQ+I+L  +  ++MS +LHF
Sbjct: 121 TLQLISLTSTASLLMSGVLHF 141

[Close]

BLAST of Cla97C05G094260 vs. NCBI nr
Match: XP_022983266.1 (lipid transfer-like protein VAS [Cucurbita maxima])

HSP 1 Score: 173.3 bits (438), Expect = 5.7e-40
Identity = 87/131 (66.41%), Postives = 108/131 (82.44%), Query Frame = 0


Query: 11  AVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCG 70
           A++LVLA  A    ++ QDTSC+NRL+PCLNYLNGTR+PP SCCNPL+S+IDSNPDCLC 
Sbjct: 12  AMLLVLA-SAMAFQARAQDTSCMNRLIPCLNYLNGTRDPPPSCCNPLKSVIDSNPDCLCA 71

Query: 71  LISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCL-TPNNAGLPSMSSTLQVITLAIS 130
           LISR+GS+RAE AGID++QAQLLP RCG+HVNPLSCL   NNA   S+SS LQ+I+L  +
Sbjct: 72  LISRDGSDRAEQAGIDVSQAQLLPGRCGEHVNPLSCLAAANNARSLSISSALQLISLTST 131

Query: 131 TMVIMSSILHF 141
             ++MS +LHF
Sbjct: 132 ASLLMSGVLHF 141

[Close]

BLAST of Cla97C05G094260 vs. NCBI nr
Match: XP_022935175.1 (lipid transfer-like protein VAS [Cucurbita moschata])

HSP 1 Score: 172.2 bits (435), Expect = 1.3e-39
Identity = 87/131 (66.41%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 11  AVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCG 70
           A++LVLA  A     + QDTSC+NRL+PCLNYLNGTR+PP SCCNPL+S+IDSNPDCLC 
Sbjct: 12  AMLLVLA-SAMAFQGRAQDTSCMNRLIPCLNYLNGTRDPPSSCCNPLKSVIDSNPDCLCA 71

Query: 71  LISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCL-TPNNAGLPSMSSTLQVITLAIS 130
           LISR+GS+RAE AGID++QAQLLP RCG+HVNPLSCL   NNA   S+SSTLQ+I+L  +
Sbjct: 72  LISRDGSDRAEQAGIDVSQAQLLPGRCGEHVNPLSCLAAANNARSLSISSTLQLISLTST 131

Query: 131 TMVIMSSILHF 141
             ++MS +L F
Sbjct: 132 ASLLMSGVLRF 141

[Close]

BLAST of Cla97C05G094260 vs. TrEMBL
Match: tr|A0A0A0L9L7|A0A0A0L9L7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G250900 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 8.1e-51
Identity = 104/139 (74.82%), Postives = 124/139 (89.21%), Query Frame = 0


Query: 4   RSAMAAMAVVLVLACGATMG-ISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIID 63
           +  +AA  V+++L CG ++G ++Q++DTSCVN L+PCLNY+NGTR+PPESCCNPLRSII+
Sbjct: 9   KKIVAAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCCNPLRSIIN 68

Query: 64  SNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCLTPNN-AGLPSMSSTL 123
           SNP+CLCGLISREGSNRAEAAGIDIN+AQLLPARCG+HVNPLSCL  NN +G PSMS  L
Sbjct: 69  SNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGSPSMSLAL 128

Query: 124 QVITLAISTMVIMSSILHF 141
           QVITLAIST +IMSSILHF
Sbjct: 129 QVITLAISTKLIMSSILHF 147

[Close]

BLAST of Cla97C05G094260 vs. TrEMBL
Match: tr|A0A1S3BMN1|A0A1S3BMN1_CUCME (lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103491702 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.1e-50
Identity = 105/141 (74.47%), Postives = 125/141 (88.65%), Query Frame = 0


Query: 2   MERSAMAAMAVVLVLACGATMG-ISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSI 61
           M++   AA  V+++L CG ++G ++QN+ TSCVN LVPCLNY+NGTR+PPESCC+PLRSI
Sbjct: 8   MKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESCCSPLRSI 67

Query: 62  IDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCLTPNN-AGLPSMSS 121
           I+SNP+CLCGLISREGSNRAEAAGIDIN+AQLLPARCG+HVNPLSCL  NN +GL S+S 
Sbjct: 68  INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGLVSISL 127

Query: 122 TLQVITLAISTMVIMSSILHF 141
           TLQVITLAIST +IMSSILHF
Sbjct: 128 TLQVITLAISTKLIMSSILHF 148

[Close]

BLAST of Cla97C05G094260 vs. TrEMBL
Match: tr|A0A2P4HHW6|A0A2P4HHW6_QUESU (Lipid transfer-like protein vas OS=Quercus suber OX=58331 GN=CFP56_61842 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-29
Identity = 65/116 (56.03%), Postives = 83/116 (71.55%), Query Frame = 0


Query: 28  QDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDI 87
           QDTSC+N+L PCLNYLNGTRNPP+SCCNPL+S+I SNP CLC LIS + S +AE AGI++
Sbjct: 27  QDTSCLNQLTPCLNYLNGTRNPPDSCCNPLKSVIKSNPKCLCSLISIKSSRKAEQAGINV 86

Query: 88  NQAQLLPARCGQHVNPLSCL--------------TPNNAGLPSMSSTLQVITLAIS 130
           NQAQ+LP RCGQ+VNP+SCL              + N+A + S  S   ++  A+S
Sbjct: 87  NQAQMLPGRCGQNVNPISCLSVSSSPSGPSPRGSSSNSASISSFQSKCIILITALS 142

[Close]

BLAST of Cla97C05G094260 vs. TrEMBL
Match: tr|A0A165XHW6|A0A165XHW6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_014455 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.1e-29
Identity = 57/95 (60.00%), Postives = 75/95 (78.95%), Query Frame = 0


Query: 25  SQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLCGLISREGSNRAEAAG 84
           ++  D SC+N LVPCLNYLNGTR+P + CC+PL+S+I SNP+CLC LI+ +G+ +A+ AG
Sbjct: 24  ARQADRSCINELVPCLNYLNGTRDPQDDCCDPLKSVIKSNPECLCSLITNKGTKQAQEAG 83

Query: 85  IDINQAQLLPARCGQHVNPLSCLTPNNAGLPSMSS 120
           ID+N+AQ LPARCGQHVNP+SCLT +     S  S
Sbjct: 84  IDVNEAQQLPARCGQHVNPISCLTDSGGSADSKKS 118

[Close]

BLAST of Cla97C05G094260 vs. TrEMBL
Match: tr|A0A059APP0|A0A059APP0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I01575 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.7e-29
Identity = 68/136 (50.00%), Postives = 96/136 (70.59%), Query Frame = 0


Query: 10  MAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSNPDCLC 69
           MA VLVL  G     +Q QDTSC++RL PCLNYLNGT++PP +CC+PL+S+I S+P CLC
Sbjct: 1   MAAVLVLV-GLLAVEAQAQDTSCLSRLAPCLNYLNGTQDPPSACCDPLKSVISSDPKCLC 60

Query: 70  GLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCLT---------PNNAGL---PSM 129
            LIS +G+ +AE AGI++N+AQ LP RCGQHVNP++CL+          N+AGL    S+
Sbjct: 61  SLISNQGAQQAEQAGINVNEAQQLPGRCGQHVNPIACLSGSPSSGNSGENSAGLFLGSSL 120

Query: 130 SSTLQVITLAISTMVI 134
            + L ++ L ++  ++
Sbjct: 121 RTPLAIVALLVTAQIL 135

[Close]

BLAST of Cla97C05G094260 vs. Swiss-Prot
Match: sp|Q9FFY3|VAS_ARATH (Lipid transfer-like protein VAS OS=Arabidopsis thaliana OX=3702 GN=VAS PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 6.9e-29
Identity = 66/143 (46.15%), Postives = 94/143 (65.73%), Query Frame = 0


Query: 1   MMERSAMAAMAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSI 60
           MM     +   V+L++A  + M I+  Q  SC+N+L PCLNYLNGT+  P+ CCNPL+S+
Sbjct: 2   MMGMKFFSFYVVLLLVAASSGMRIN-GQSVSCLNQLAPCLNYLNGTKEVPQVCCNPLKSV 61

Query: 61  IDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCLTPNNAGLP----- 120
           I +NP+CLC +IS   S++AE AGID+N AQ+LPARCG+HVNP++CLT +  G       
Sbjct: 62  IRNNPECLCRMISNRWSSQAERAGIDVNDAQMLPARCGEHVNPIACLTRSRGGSTNSDRS 121

Query: 121 -----SMSSTLQVITLAISTMVI 134
                + S +  + TLAI+  V+
Sbjct: 122 SSIGNTFSQSYWMTTLAIAATVL 143

[Close]

BLAST of Cla97C05G094260 vs. TAIR10
Match: AT5G13900.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 128.3 bits (321), Expect = 3.8e-30
Identity = 66/143 (46.15%), Postives = 94/143 (65.73%), Query Frame = 0


Query: 1   MMERSAMAAMAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSI 60
           MM     +   V+L++A  + M I+  Q  SC+N+L PCLNYLNGT+  P+ CCNPL+S+
Sbjct: 2   MMGMKFFSFYVVLLLVAASSGMRIN-GQSVSCLNQLAPCLNYLNGTKEVPQVCCNPLKSV 61

Query: 61  IDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSCLTPNNAGLP----- 120
           I +NP+CLC +IS   S++AE AGID+N AQ+LPARCG+HVNP++CLT +  G       
Sbjct: 62  IRNNPECLCRMISNRWSSQAERAGIDVNDAQMLPARCGEHVNPIACLTRSRGGSTNSDRS 121

Query: 121 -----SMSSTLQVITLAISTMVI 134
                + S +  + TLAI+  V+
Sbjct: 122 SSIGNTFSQSYWMTTLAIAATVL 143

[Close]

BLAST of Cla97C05G094260 vs. TAIR10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 4.0e-11
Identity = 34/96 (35.42%), Postives = 54/96 (56.25%), Query Frame = 0


Query: 13  VLVLACGATMGISQNQDTSCVNRLVPCLNYLNG-TRNPPESCCNPLRSIIDSNPDCLCGL 72
           V +    +TM  +Q+  T+ +  + PCLNY+ G + +P + CCN L  ++ S+PDCLC +
Sbjct: 12  VFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSPDCLCQV 71

Query: 73  ISREGSNRAEAAGIDINQAQL--LPARCGQHVNPLS 106
           ++  GS      GI++NQ Q   LP  C     P+S
Sbjct: 72  LNGGGSQ----LGINVNQTQALGLPRACNVQTPPVS 103

[Close]

BLAST of Cla97C05G094260 vs. TAIR10
Match: AT2G48130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 52.8 bits (125), Expect = 2.0e-07
Identity = 34/102 (33.33%), Postives = 53/102 (51.96%), Query Frame = 0


Query: 11  AVVLVLACGATMGISQNQ-DTSCVNRLV---PCLNYLNG-TRNPPESCCNPLRSIIDSNP 70
           A+  V    A   +++ Q  +SCV+ L    PCL+Y+ G +  P + CC+ L S+I S+P
Sbjct: 8   AITFVALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKSSP 67

Query: 71  DCLCGLISREGSNRAEAAGIDIN--QAQLLPARCGQHVNPLS 106
            C+C  ++    N     G++IN  QA  LP  C     PL+
Sbjct: 68  QCICSAVNSPIPN----IGLNINRTQALQLPNACNIQTPPLT 105

[Close]

BLAST of Cla97C05G094260 vs. TAIR10
Match: AT1G70250.1 (receptor serine/threonine kinase, putative)

HSP 1 Score: 52.4 bits (124), Expect = 2.7e-07
Identity = 29/102 (28.43%), Postives = 49/102 (48.04%), Query Frame = 0


Query: 5   SAMAAMAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLNGTRNPPESCCNPLRSIIDSN 64
           +AM   AV++ +       +     T CV+++VPC  +LN T  P   CCN ++  ++ +
Sbjct: 3   TAMMIFAVLVTV-------VEVEAQTECVSKIVPCFRFLNTTTKPSTDCCNSIKEAMEKD 62

Query: 65  PDCLCGLISREGSNRAEAAGIDINQAQLLPARCGQHVNPLSC 107
             CLC + +  G        I  +QA  L  RCG + +  +C
Sbjct: 63  FSCLCTIYNTPG--LLAQFNITTDQALGLNLRCGVNTDLSAC 95

[Close]

BLAST of Cla97C05G094260 vs. TAIR10
Match: AT1G03103.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 52.0 bits (123), Expect = 3.5e-07
Identity = 37/107 (34.58%), Postives = 56/107 (52.34%), Query Frame = 0


Query: 6   AMAAMAVVLVLACGATMGISQNQDTSCVNRLVPCLNYLN-GTRNPPESCCNPLRSIIDSN 65
           A+ A+ +   L  GAT   +  +DT  +  L PCL YLN G+ +P  SCC    +++ S+
Sbjct: 4   AILALVIATFLYGGATTVQAGCRDT--LTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQSS 63

Query: 66  PDCLCGLISREGSNRAEAAGIDINQ--AQLLPARCG-QHVNPLSCLT 109
           P+CLC +++   SN +   G   N+  A  LP  C  Q  +P  C T
Sbjct: 64  PECLCSVVN---SNESSFYGFKFNRTLALNLPTACNVQTPSPSLCNT 105

The following BLAST results are available for this feature:

BLAST of Cla97C05G094260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145619.1	1.2e-50	74.82	PREDICTED: lipid transfer-like protein VAS [Cucumis sativus] >KGN57679.1 hypothe...	[more]
XP_008449981.1	4.7e-50	74.47	PREDICTED: lipid transfer-like protein VAS [Cucumis melo]	[more]
XP_023528269.1	4.4e-40	61.70	lipid transfer-like protein VAS [Cucurbita pepo subsp. pepo]	[more]
XP_022983266.1	5.7e-40	66.41	lipid transfer-like protein VAS [Cucurbita maxima]	[more]
XP_022935175.1	1.3e-39	66.41	lipid transfer-like protein VAS [Cucurbita moschata]	[more]

BLAST of Cla97C05G094260 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L9L7\|A0A0A0L9L7_CUCSA	8.1e-51	74.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G250900 PE=3 SV=1	[more]
tr\|A0A1S3BMN1\|A0A1S3BMN1_CUCME	3.1e-50	74.47	lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103491702 PE=3 SV=...	[more]
tr\|A0A2P4HHW6\|A0A2P4HHW6_QUESU	1.3e-29	56.03	Lipid transfer-like protein vas OS=Quercus suber OX=58331 GN=CFP56_61842 PE=3 SV...	[more]
tr\|A0A165XHW6\|A0A165XHW6_DAUCA	5.1e-29	60.00	Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_014455 ...	[more]
tr\|A0A059APP0\|A0A059APP0_EUCGR	6.7e-29	50.00	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I01575 PE=3 SV...	[more]

BLAST of Cla97C05G094260 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FFY3\|VAS_ARATH	6.9e-29	46.15	Lipid transfer-like protein VAS OS=Arabidopsis thaliana OX=3702 GN=VAS PE=2 SV=1	[more]

BLAST of Cla97C05G094260 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13900.1	3.8e-30	46.15	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G22600.1	4.0e-11	35.42	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G48130.1	2.0e-07	33.33	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G70250.1	2.7e-07	28.43	receptor serine/threonine kinase, putative	[more]
AT1G03103.1	3.5e-07	34.58	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008289	lipid binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006869	lipid transport

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR016140	Bifunc_inhib/LTP/seed_store
IPR000528	Plant_LTP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G094260.1	Cla97C05G094260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant lipid transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 84..101 score: 32.39 coord: 48..62 score: 26.56 coord: 28..44 score: 25.43
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 18..106 e-value: 0.0015 score: 27.8
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 13..106 e-value: 2.9E-16 score: 59.3
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 29..106 e-value: 1.6E-12 score: 49.0
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 7..138
None	No IPR available	PANTHER	PTHR33044:SF29	SUBFAMILY NOT NAMED	coord: 7..138
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..18 score: 5.0
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 36..98 e-value: 1.47859E-13 score: 60.5183
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 31..108

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G094260	Cla007157	Watermelon (97103) v1	wmwmbB208
Cla97C05G094260	Csa3G250900	Cucumber (Chinese Long) v2	cuwmbB218
Cla97C05G094260	MELO3C014762	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G094260	ClCG05G012510	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G094260	CSPI03G19970	Wild cucumber (PI 183967)	cpiwmbB224
Cla97C05G094260	Cucsa.032040	Cucumber (Gy14) v1	cgywmbB004
Cla97C05G094260	CmoCh14G007900	Cucurbita moschata (Rifu)	cmowmbB244
Cla97C05G094260	Lsi05G004300	Bottle gourd (USVL1VR-Ls)	lsiwmbB329
Cla97C05G094260	CsGy3G019800	Cucumber (Gy14) v2	cgybwmbB209
Cla97C05G094260	MELO3C014762.2	Melon (DHL92) v3.6.1	medwmbB430
Cla97C05G094260	Carg22307	Silver-seed gourd	carwmbB0503
Cla97C05G094260	CsaV3_3G020010	Cucumber (Chinese Long) v3	cucwmbB220
Cla97C05G094260	Bhi01G001398	Wax gourd	wgowmbB186

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G094260	Silver-seed gourd	carwmbB0512
Cla97C05G094260	Cucurbita maxima (Rimu)	cmawmbB125
Cla97C05G094260	Cucurbita maxima (Rimu)	cmawmbB264
Cla97C05G094260	Cucurbita moschata (Rifu)	cmowmbB108
Cla97C05G094260	Wax gourd	wgowmbB194