Cla97C03G055300 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTACTAATAGCCTGAAGAGTATGGTTGTCGCAGCAGTCAATAAGGGAGTGACAGAAGCAAGGGCAAGGATATTTGGTCACATACTTAACCCAACAGGTCAACGGTCTACCCACAAGCTTCTGCGCAAAAAACTCATTGGTGACAAAGTAGCACAGTGGTATCCATATGATATCAAGAAGGATGATCCTCTTGTCATGGCTCGTCAAGAACAAGAGTACACTCTCTTTCTATTTCTGACTTTGCAATGAGCTAGACATAACCATTTCAACGAAATTTTATGCATCAGATGTATATTTTCTCTGTCAATATACTGAGTGATATTAGGATAAGGAGTGATTTGTAGAAAGGCCATATGTGTTTAACATGGAAAATGGGGGGATAAGGCTTGTGCATGAGTTCTCCTGCATCTTTTGAAATCATAAATTTATGCTTTAGAAACGTACCTTCATGTGGGAAGTGGGAACTTGAGGTATACACACATTACTATGTGAATTTTCTGGTTAAAGAAAATAGGTTTCAATTCAACAGTGCATTCTTTTTTTTGGAAAAAAAAAAACAAATTTGGGGGTGTGGATTCAAATTTCCAAGCTCAAGGGAAATATGCTTTCTATACCTTAAGGTTAGGATCAATGCTATTTTGGAGGAGGTCAACATGAGAGTGCGGTTTAGTAACTGAGTTTCACATGTTTCTAGAGAGATGTTACCTTCTTTAATGAGGGCCACAGCTTATCTGGGTTTTTAGTTGCATGTCAATTACCAGAGCTTTTAAAAGGTACAAACTGGTGGTTAATTTTATATCTTGTTGTTGTTCTGTTTCTGCCCTGTAGTTGCTTTTAAAAGGTACAAACTGGTGGTTAATTTTATATCTTGTTGTTGTTCTGTTTCTGCCCTGTAGTTTATCTTTCTGTGCATAGATTTGTCCTAGTATTCTAATTTTCTGCCATCTACCTTGCTAGGCGCTTGTCCAAGCTTGAAATGCTAAAGCGTCGTGGTAAGGGACCACCTAAGAAGGGCCAAGGTAGGCGTGCGGCCAAGCGCAACAAGTAG ATGGCTACTAATAGCCTGAAGAGTATGGTTGTCGCAGCAGTCAATAAGGGAGTGACAGAAGCAAGGGCAAGGATATTTGGTCACATACTTAACCCAACAGGTCAACGGTCTACCCACAAGCTTCTGCGCAAAAAACTCATTGGTGACAAAGTAGCACAGTGGTATCCATATGATATCAAGAAGGATGATCCTCTTGTCATGGCTCGTCAAGAACAAGAGCGCTTGTCCAAGCTTGAAATGCTAAAGCGTCGTGGTAAGGGACCACCTAAGAAGGGCCAAGGTAGGCGTGCGGCCAAGCGCAACAAGTAG ATGGCTACTAATAGCCTGAAGAGTATGGTTGTCGCAGCAGTCAATAAGGGAGTGACAGAAGCAAGGGCAAGGATATTTGGTCACATACTTAACCCAACAGGTCAACGGTCTACCCACAAGCTTCTGCGCAAAAAACTCATTGGTGACAAAGTAGCACAGTGGTATCCATATGATATCAAGAAGGATGATCCTCTTGTCATGGCTCGTCAAGAACAAGAGCGCTTGTCCAAGCTTGAAATGCTAAAGCGTCGTGGTAAGGGACCACCTAAGAAGGGCCAAGGTAGGCGTGCGGCCAAGCGCAACAAGTAG MATNSLKSMVVAAVNKGVTEARARIFGHILNPTGQRSTHKLLRKKLIGDKVAQWYPYDIKKDDPLVMARQEQERLSKLEMLKRRGKGPPKKGQGRRAAKRNK
BLAST of Cla97C03G055300 vs. NCBI nr
Match: XP_023000758.1 (28S ribosomal protein S33, mitochondrial [Cucurbita maxima] >XP_023000759.1 28S ribosomal protein S33, mitochondrial [Cucurbita maxima]) HSP 1 Score: 191.4 bits (485), Expect = 1.5e-45 Identity = 96/102 (94.12%), Postives = 100/102 (98.04%), Query Frame = 0
BLAST of Cla97C03G055300 vs. NCBI nr
Match: XP_004145134.1 (PREDICTED: 28S ribosomal protein S33, mitochondrial [Cucumis sativus] >KGN64455.1 hypothetical protein Csa_1G056910 [Cucumis sativus]) HSP 1 Score: 191.0 bits (484), Expect = 1.9e-45 Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0
BLAST of Cla97C03G055300 vs. NCBI nr
Match: XP_008440305.1 (PREDICTED: 28S ribosomal protein S33, mitochondrial [Cucumis melo]) HSP 1 Score: 190.3 bits (482), Expect = 3.3e-45 Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0
BLAST of Cla97C03G055300 vs. NCBI nr
Match: XP_022923929.1 (28S ribosomal protein S33, mitochondrial [Cucurbita moschata] >XP_022923930.1 28S ribosomal protein S33, mitochondrial [Cucurbita moschata] >XP_023519632.1 28S ribosomal protein S33, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023519633.1 28S ribosomal protein S33, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 190.3 bits (482), Expect = 3.3e-45 Identity = 95/102 (93.14%), Postives = 100/102 (98.04%), Query Frame = 0
BLAST of Cla97C03G055300 vs. NCBI nr
Match: XP_022137168.1 (28S ribosomal protein S33, mitochondrial [Momordica charantia] >XP_022137169.1 28S ribosomal protein S33, mitochondrial [Momordica charantia]) HSP 1 Score: 188.0 bits (476), Expect = 1.6e-44 Identity = 95/102 (93.14%), Postives = 99/102 (97.06%), Query Frame = 0
BLAST of Cla97C03G055300 vs. TrEMBL
Match: tr|A0A0A0LRA7|A0A0A0LRA7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G056910 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.3e-45 Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0
BLAST of Cla97C03G055300 vs. TrEMBL
Match: tr|A0A1S3B0S3|A0A1S3B0S3_CUCME (28S ribosomal protein S33, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484788 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 2.2e-45 Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0
BLAST of Cla97C03G055300 vs. TrEMBL
Match: tr|D7T9R4|D7T9R4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0011g01090 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 2.8e-40 Identity = 88/102 (86.27%), Postives = 96/102 (94.12%), Query Frame = 0
BLAST of Cla97C03G055300 vs. TrEMBL
Match: tr|A0A1U8AFN8|A0A1U8AFN8_NELNU (uncharacterized protein LOC104599760 OS=Nelumbo nucifera OX=4432 GN=LOC104599760 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.0e-39 Identity = 86/100 (86.00%), Postives = 94/100 (94.00%), Query Frame = 0
BLAST of Cla97C03G055300 vs. TrEMBL
Match: tr|A0A061G2E2|A0A061G2E2_THECC (Mitochondrial isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_012548 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 5.2e-39 Identity = 87/102 (85.29%), Postives = 91/102 (89.22%), Query Frame = 0
BLAST of Cla97C03G055300 vs. Swiss-Prot
Match: sp|P53305|RT27_YEAST (Mitochondrial 37S ribosomal protein S27 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RSM27 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 6.6e-05 Identity = 35/83 (42.17%), Postives = 45/83 (54.22%), Query Frame = 0
BLAST of Cla97C03G055300 vs. TAIR10
Match: AT5G44710.1 (Ribosomal protein S27/S33, mitochondrial (InterPro:IPR013219)) HSP 1 Score: 162.5 bits (410), Expect = 1.3e-40 Identity = 80/102 (78.43%), Postives = 94/102 (92.16%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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