CSPI01G10000 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGAAGAAAGGGGTTTTAAGAAAAAATATCGACTCTATCCTCCGCTTATGATCTCTGGACGGCGGCGGCGATTACCTCCCCCTCCGATCTTGTTAGTTTCAAACTTTCAGTTTCTCTCTGTCACTGGTATGTATTTCATTTACTATTGTTTCTATTCCATATTTTCTTCAAGTAAACGAAATGAAAACAAGCAAACCTAAACCTCTTCCTTCACTCACTTCCGCATTCTCAATCTTCTGCCGTTGCAGCTCCCAAATCCGACCAATTTTGGATGGGGTTCTAATTTTTTTTTAATCAAAACAAGATTTCAAATCATTTTGGTCTTATTCGATATTGAACTATTTCTAAAATAGGGTCCCTCAAGGATTCGAAGATGAATTTGAGGGATTCGGCATTGTGATGTGAATTACTGCTCAGTGAATTTTGCTTCTTGACTAAGCTTTGCACTTGTGAAAACCTGCATATACATCTAATTTACGTTCTATTCTTGTTATAGTGATAATTATCGCATGTCAGGTTTATTTCTTATTTCTAGGATTATCTCTAGTAAGAACAGATTTGTGGGCTTGAAGCAGTCATTTTAATTTTTTTGCAAATTCTTATTGGTAATGGGAATACTTTGGCTTCAATTCTTGTTCTATTCTCGTAAGCTTCTTACAATTACCAACTATTAATTATCATACTGTGTGTAGAGCAATTGAGAATGACCGGTTTTGATATGGACGCACTCTCAAGGAGTGTGAAGTGTTTGGTTTATGAGCTTTTAAGTTTCATTGTCGATCGAGTCCAATTTTCATATGATTCTTCATTGAATTGTTTCATATTTCTGGATACTTTATACTTACAGGAAATTATTATTGCAGGTGAGACTTTCTATTTGAAGGTTGAACAAAAGGCTCATTTACATTCTTTCTCCTTGAAAATCGTTTGTTTGTTATTAAAAAAAAAAAGGCTCATTCACATTCTTGGTTATCTTTATCTGATGAAGTAGTTTCTGTAAATTTGGTGTTGGAAAGTATTAATTCATCAGCTGAAGCTTCTAATGAACGACATGTTTTTGCATTATTTTCTTTGAAATTAAAATCCTCAGGTGCCTCTTTGTTGATATACGTAGGGAAAGCCAGAAGAGAGAATGGCTACAAATAGCCTGAAGAGCATGATTGCCACAGCAGTCAATAAGGGAGTGACAGAAGCAAGGGCAAGGATATTTGGTCACATACTTAACCCAACAGGTCAACGATCTACCCACAAGCTTCTGCGCAAAAAACTCATTGGTGACAAAGTATCCCAGTGGTATCCATATGACATCAAGAAGGATGATCCTCTTGTCATGGCTCGCCTAGAACAAGAGTATGCTCTCTTTCTATTTCTGACTCTGCCATGCGCTAGACATATCATTTGGATAAATTTCTTGTGCATCAGCTGTTGATTTTCTCCGTCAATATACTGAGTGATATTAGGACAAGCAGTGATTTGTAGAAAGGCCATATCTGTCCATGCATGAGTGTTCTTGCATCTTCTGAAATTACCAATTTAACACTCTAGAAACGTTGGCTTCATGTGGGAAGTGGGAACTTGAGATATATACATACTACTGTCTACTAGTGAATTTTCTAGTTAGCAAAAGTAGGTTTCAATCAGCAGTGCATTGTTTAAAAAACCAAATCTGGGGTGTGGATTGAGACTTCCAAGCTTAAGGGAAATGTGCTTCTATACCTTAATATCAGGATCTTAATGTTGTTTGGAGAAGGAAATCAACATGACGGAGCAGTTCAGTAACTGAGTTTCAAATGTTTCTAGAGACATATTACATTCTCTAACAAGCACAAAACTCATCTGGGTTTTTAGTTGCATATCGATTACCAAAGCTTTTAAACATTATGAGCCGGTGTTTAATTTTATGCTTTTCATTCAATTTTCTTCTGTTTTTGCCCCGCATTTTTATCTTTCTGTGCATAGATTTGTCCCAATATTCTGATTATCTTCCATCTACTTTGCTAGGCGCTTGTCCAAGCTTGAAATGCTAAAGCGTCGTGGTAAGGGACCACCTAAGAAGGGCCAAGGCAGGCGTGCGGCCAAGCGCAACAAGTAGAGTCAATGACAGTGAAATTGTTCCTGTCAGTTATTTTTGTTGTTTTTCTTAACAAAGTTTAGGTTATGGGCCAGTTTCCTCACGGTTGTAATGACTTCTATTCATCATTATGATCAATGTTTTCAACAAATGTATTTGGTTCCAGCAAATTAATACGTACTATACATGGAAAATTCCAGAAATAAATCGCATAAAACACGTAATCTGTGAATGAAAAG ATGGCTACAAATAGCCTGAAGAGCATGATTGCCACAGCAGTCAATAAGGGAGTGACAGAAGCAAGGGCAAGGATATTTGGTCACATACTTAACCCAACAGGTCAACGATCTACCCACAAGCTTCTGCGCAAAAAACTCATTGGTGACAAAGTATCCCAGTGGTATCCATATGACATCAAGAAGGATGATCCTCTTGTCATGGCTCGCCTAGAACAAGAGCGCTTGTCCAAGCTTGAAATGCTAAAGCGTCGTGGTAAGGGACCACCTAAGAAGGGCCAAGGCAGGCGTGCGGCCAAGCGCAACAAGTAG ATGGCTACAAATAGCCTGAAGAGCATGATTGCCACAGCAGTCAATAAGGGAGTGACAGAAGCAAGGGCAAGGATATTTGGTCACATACTTAACCCAACAGGTCAACGATCTACCCACAAGCTTCTGCGCAAAAAACTCATTGGTGACAAAGTATCCCAGTGGTATCCATATGACATCAAGAAGGATGATCCTCTTGTCATGGCTCGCCTAGAACAAGAGCGCTTGTCCAAGCTTGAAATGCTAAAGCGTCGTGGTAAGGGACCACCTAAGAAGGGCCAAGGCAGGCGTGCGGCCAAGCGCAACAAGTAG
BLAST of CSPI01G10000 vs. TrEMBL
Match: A0A0A0LRA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G056910 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 1.3e-47 Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 1
BLAST of CSPI01G10000 vs. TrEMBL
Match: D7T9R4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g01090 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.7e-40 Identity = 85/102 (83.33%), Postives = 95/102 (93.14%), Query Frame = 1
BLAST of CSPI01G10000 vs. TrEMBL
Match: M5XNS8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013771mg PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 9.8e-40 Identity = 84/102 (82.35%), Postives = 93/102 (91.18%), Query Frame = 1
BLAST of CSPI01G10000 vs. TrEMBL
Match: A0A061G2E2_THECC (Mitochondrial isoform 1 OS=Theobroma cacao GN=TCM_012548 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 2.8e-39 Identity = 86/102 (84.31%), Postives = 91/102 (89.22%), Query Frame = 1
BLAST of CSPI01G10000 vs. TrEMBL
Match: A0A0B2P5W5_GLYSO (Mitochondral 37S ribosomal protein S27 OS=Glycine soja GN=glysoja_021959 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 6.3e-39 Identity = 83/102 (81.37%), Postives = 94/102 (92.16%), Query Frame = 1
BLAST of CSPI01G10000 vs. TAIR10
Match: AT5G44710.1 (AT5G44710.1 Ribosomal protein S27/S33, mitochondrial (InterPro:IPR013219)) HSP 1 Score: 162.9 bits (411), Expect = 1.0e-40 Identity = 80/102 (78.43%), Postives = 94/102 (92.16%), Query Frame = 1
BLAST of CSPI01G10000 vs. NCBI nr
Match: gi|449454784|ref|XP_004145134.1| (PREDICTED: 28S ribosomal protein S33, mitochondrial [Cucumis sativus]) HSP 1 Score: 196.8 bits (499), Expect = 1.8e-47 Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 1
BLAST of CSPI01G10000 vs. NCBI nr
Match: gi|659067600|ref|XP_008440305.1| (PREDICTED: mitochondrial 37S ribosomal protein S27 [Cucumis melo]) HSP 1 Score: 193.7 bits (491), Expect = 1.5e-46 Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 1
BLAST of CSPI01G10000 vs. NCBI nr
Match: gi|694425017|ref|XP_009340264.1| (PREDICTED: 28S ribosomal protein S33, mitochondrial [Pyrus x bretschneideri]) HSP 1 Score: 173.3 bits (438), Expect = 2.2e-40 Identity = 87/102 (85.29%), Postives = 93/102 (91.18%), Query Frame = 1
BLAST of CSPI01G10000 vs. NCBI nr
Match: gi|645233973|ref|XP_008223594.1| (PREDICTED: mitochondrial 37S ribosomal protein S27 [Prunus mume]) HSP 1 Score: 172.6 bits (436), Expect = 3.7e-40 Identity = 85/102 (83.33%), Postives = 94/102 (92.16%), Query Frame = 1
BLAST of CSPI01G10000 vs. NCBI nr
Match: gi|225423583|ref|XP_002273533.1| (PREDICTED: 28S ribosomal protein S33, mitochondrial [Vitis vinifera]) HSP 1 Score: 171.4 bits (433), Expect = 8.2e-40 Identity = 85/102 (83.33%), Postives = 95/102 (93.14%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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