Cla97C02G039440 (gene) Watermelon (97103) v2

Overview
NameCla97C02G039440
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Description50S ribosomal protein L10, chloroplastic
LocationCla97Chr02 : 27247429 .. 27248133 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTTCTCTTCTAAGCTTTACCTCCTTCACACCCCCTTCTTCTTCTTCTCAAATTCTAACCCTAAACCGACCCACAAACCCATTTTCCTTCTCTCTCCCCCGCCATTCTACCAGTCAAAGCCGCCATTATCGCGGCCTCAAGGTCGCTGCCGCCATTTCCCGCACTAAGAAAGAGGAAACCGTGGAAACAGTCAAACAACAGCTCGAAGACTGCTATCTATTGGCCGGAATCAAGTACAAAGGGTTCACCGTCAAGCAATTTCAAGAACTCCGTCGATCTCTTCCCGAAACCTCAAAACTCATTGTCGCCAAAAACACGCTCGTTCTTAAAGCGATTGAAGGGACCTCTTGGGAAGCTCTAAAGCCCTGTATGAAGGGCATGAATGTTTGGCTATTTGTCCACTCCGAGGAAATTCCGGCCGCAATTAAGCCTTATAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGATTTCACCGGAGCGGTTTTCGAGGGGAAATATTACGGGCCGGATGATTTCAAGGCGTTAGAGACAATGCCGTCGAGAGCGGAGGTTTATGCCAAAATGTTGGGTCTGTTGCAGGGTCCGGCGTCAAGCTTGGTTGGAACGATACAGGCTCCGGCGAGGGAATTGTTGATGGTTCTGAAGGCCTACGTGAAGAAATTGGAGGAGCAAGGCGGCGGCGCTGGACAGTGA

mRNA sequence

ATGGAAGCTTCTCTTCTAAGCTTTACCTCCTTCACACCCCCTTCTTCTTCTTCTCAAATTCTAACCCTAAACCGACCCACAAACCCATTTTCCTTCTCTCTCCCCCGCCATTCTACCAGTCAAAGCCGCCATTATCGCGGCCTCAAGGTCGCTGCCGCCATTTCCCGCACTAAGAAAGAGGAAACCGTGGAAACAGTCAAACAACAGCTCGAAGACTGCTATCTATTGGCCGGAATCAAGTACAAAGGGTTCACCGTCAAGCAATTTCAAGAACTCCGTCGATCTCTTCCCGAAACCTCAAAACTCATTGTCGCCAAAAACACGCTCGTTCTTAAAGCGATTGAAGGGACCTCTTGGGAAGCTCTAAAGCCCTGTATGAAGGGCATGAATGTTTGGCTATTTGTCCACTCCGAGGAAATTCCGGCCGCAATTAAGCCTTATAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGATTTCACCGGAGCGGTTTTCGAGGGGAAATATTACGGGCCGGATGATTTCAAGGCGTTAGAGACAATGCCGTCGAGAGCGGAGGTTTATGCCAAAATGTTGGGTCTGTTGCAGGGTCCGGCGTCAAGCTTGGTTGGAACGATACAGGCTCCGGCGAGGGAATTGTTGATGGTTCTGAAGGCCTACGTGAAGAAATTGGAGGAGCAAGGCGGCGGCGCTGGACAGTGA

Coding sequence (CDS)

ATGGAAGCTTCTCTTCTAAGCTTTACCTCCTTCACACCCCCTTCTTCTTCTTCTCAAATTCTAACCCTAAACCGACCCACAAACCCATTTTCCTTCTCTCTCCCCCGCCATTCTACCAGTCAAAGCCGCCATTATCGCGGCCTCAAGGTCGCTGCCGCCATTTCCCGCACTAAGAAAGAGGAAACCGTGGAAACAGTCAAACAACAGCTCGAAGACTGCTATCTATTGGCCGGAATCAAGTACAAAGGGTTCACCGTCAAGCAATTTCAAGAACTCCGTCGATCTCTTCCCGAAACCTCAAAACTCATTGTCGCCAAAAACACGCTCGTTCTTAAAGCGATTGAAGGGACCTCTTGGGAAGCTCTAAAGCCCTGTATGAAGGGCATGAATGTTTGGCTATTTGTCCACTCCGAGGAAATTCCGGCCGCAATTAAGCCTTATAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGATTTCACCGGAGCGGTTTTCGAGGGGAAATATTACGGGCCGGATGATTTCAAGGCGTTAGAGACAATGCCGTCGAGAGCGGAGGTTTATGCCAAAATGTTGGGTCTGTTGCAGGGTCCGGCGTCAAGCTTGGTTGGAACGATACAGGCTCCGGCGAGGGAATTGTTGATGGTTCTGAAGGCCTACGTGAAGAAATTGGAGGAGCAAGGCGGCGGCGCTGGACAGTGA

Protein sequence

MEASLLSFTSFTPPSSSSQILTLNRPTNPFSFSLPRHSTSQSRHYRGLKVAAAISRTKKEETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLQGPASSLVGTIQAPARELLMVLKAYVKKLEEQGGGAGQ
Homology
[Close]
BLAST of Cla97C02G039440 vs. NCBI nr
Match: XP_004143603.1 (PREDICTED: 50S ribosomal protein L10, chloroplastic [Cucumis sativus] >KGN50478.1 hypothetical protein Csa_5G176000 [Cucumis sativus])

HSP 1 Score: 397.5 bits (1020), Expect = 3.1e-107
Identity = 222/235 (94.47%), Postives = 229/235 (97.45%), Query Frame = 0 

Query: 1   MEASLLSFTSFTPPSSSS-QILTLNRPTNPFSFSLPRHSTSQSRHYRGLKVAAAISRTKK 60
           MEASL++FTSFTPPSSSS QILTLNRPTNP SFSLPRHST+Q+RHYRGLKV+AAISRTKK
Sbjct: 1   MEASLITFTSFTPPSSSSTQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVSAAISRTKK 60

Query: 61  EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW 120
           EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW
Sbjct: 61  EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW 120

Query: 121 EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKAL 180
           EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPD+FKAL
Sbjct: 121 EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKAL 180

Query: 181 ETMPSRAEVYAKMLGLLQGPASSXXXXXXXXXXXXXXXXXXYVKKLEEQGGGAGQ 235
           ETMPSRAEVYAKMLGLLQ PAS XXXXXXXXXXXXXXXXXX V+KLEEQGGG GQ
Sbjct: 181 ETMPSRAEVYAKMLGLLQAPASXXXXXXXXXXXXXXXXXXXXVQKLEEQGGGGGQ 235

[Close]
BLAST of Cla97C02G039440 vs. NCBI nr
Match: XP_008445837.1 (PREDICTED: 50S ribosomal protein L10, chloroplastic [Cucumis melo])

HSP 1 Score: 393.7 bits (1010), Expect = 4.5e-106
Identity = 220/234 (94.02%), Postives = 227/234 (97.01%), Query Frame = 0 

Query: 1   MEASLLSFTSFTPPSSSSQILTLNRPTNPFSFSLPRHSTSQSRHYRGLKVAAAISRTKKE 60
           MEASL+SFTSFTPP  SSQILTLNRPTNP SFSLPRHST+Q+RHYRGLKVAAAISRTKKE
Sbjct: 1   MEASLISFTSFTPP-PSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE 60

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVETVKQQLEDCYLLAGIKYKGFTVK+FQELRRSLPETSKLIVAKNTLVLKAIEGTSWE
Sbjct: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKEFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALE 180
           ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGK+YGPD+FKALE
Sbjct: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKFYGPDEFKALE 180

Query: 181 TMPSRAEVYAKMLGLLQGPASSXXXXXXXXXXXXXXXXXXYVKKLEEQGGGAGQ 235
           TMPSRAEVYAKMLGLLQ PAS XXXXXXXXXXXXXXXXXX V+KLEEQGGG GQ
Sbjct: 181 TMPSRAEVYAKMLGLLQAPASXXXXXXXXXXXXXXXXXXXXVQKLEEQGGGGGQ 233

[Close]
BLAST of Cla97C02G039440 vs. NCBI nr
Match: XP_022990377.1 (50S ribosomal protein L10, chloroplastic [Cucurbita maxima])

HSP 1 Score: 383.3 bits (983), Expect = 6.1e-103
Identity = 200/234 (85.47%), Postives = 205/234 (87.61%), Query Frame = 0 

Query: 1   MEASLLSFTSFTPPSSSSQILTLNRPTNPFSFSLPRHSTSQSRHYRGLKVAAAISRTKKE 60
           MEASLLSF SF  P SSSQILTLNRPTNP SFS  RHST+Q RHYR LKVAAAISRTKKE
Sbjct: 1   MEASLLSFPSFKTP-SSSQILTLNRPTNPLSFSPLRHSTNQGRHYRCLKVAAAISRTKKE 60

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVETVK+QL+ CYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE
Sbjct: 61  ETVETVKEQLDKCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALE 180
           ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALE
Sbjct: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALE 180

Query: 181 TMPSRAEVYAKMLGLLQGPASSXXXXXXXXXXXXXXXXXXYVKKLEEQGGGAGQ 235
           TMPSRAEVYAKMLGLL+GPASS                  YV+KLEEQGGG GQ
Sbjct: 181 TMPSRAEVYAKMLGLLKGPASSLVGTLQAPARDVLMVLKAYVQKLEEQGGGGGQ 233

[Close]
BLAST of Cla97C02G039440 vs. NCBI nr
Match: XP_023523503.1 (50S ribosomal protein L10, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.0 bits (972), Expect = 1.1e-101
Identity = 197/234 (84.19%), Postives = 203/234 (86.75%), Query Frame = 0 

Query: 1   MEASLLSFTSFTPPSSSSQILTLNRPTNPFSFSLPRHSTSQSRHYRGLKVAAAISRTKKE 60
           MEASLLSF SF  P SSSQILTLNRPTNP SFS  RHST+Q RHYR LKV+ AISRTKKE
Sbjct: 1   MEASLLSFPSFKTP-SSSQILTLNRPTNPLSFSPLRHSTNQGRHYRCLKVSGAISRTKKE 60

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVETVK+QL+ CYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE
Sbjct: 61  ETVETVKEQLDKCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALE 180
           ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFK LE
Sbjct: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKTLE 180

Query: 181 TMPSRAEVYAKMLGLLQGPASSXXXXXXXXXXXXXXXXXXYVKKLEEQGGGAGQ 235
           TMPSRAEVYAKMLGLL+GPASS                  YV+KLEEQGGG GQ
Sbjct: 181 TMPSRAEVYAKMLGLLKGPASSLVGTLQAPARDVLMVLKAYVQKLEEQGGGGGQ 233

[Close]
BLAST of Cla97C02G039440 vs. NCBI nr
Match: XP_022943219.1 (50S ribosomal protein L10, chloroplastic [Cucurbita moschata])

HSP 1 Score: 371.3 bits (952), Expect = 2.4e-99
Identity = 193/229 (84.28%), Postives = 199/229 (86.90%), Query Frame = 0 

Query: 1   MEASLLSFTSFTPPSSSSQILTLNRPTNPFSFSLPRHSTSQSRHYRGLKVAAAISRTKKE 60
           MEASLLSF SF  P SSSQILTLNRPTNP SFS  RHST+Q RHYR LKVA AISRTKKE
Sbjct: 1   MEASLLSFPSFKTP-SSSQILTLNRPTNPLSFSPLRHSTNQGRHYRCLKVAGAISRTKKE 60

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVETVK+QL+ CYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGT+WE
Sbjct: 61  ETVETVKEQLDKCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTTWE 120

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALE 180
           ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFK LE
Sbjct: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKTLE 180

Query: 181 TMPSRAEVYAKMLGLLQGPASSXXXXXXXXXXXXXXXXXXYVKKLEEQG 230
           TMPSRAEVYAKMLGLL+GPASS                  YV+KLEEQG
Sbjct: 181 TMPSRAEVYAKMLGLLKGPASSLVGTLQAPARDVLMVLKAYVQKLEEQG 228

[Close]
BLAST of Cla97C02G039440 vs. TrEMBL
Match: tr|A0A0A0KLL5|A0A0A0KLL5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176000 PE=3 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 2.1e-107
Identity = 222/235 (94.47%), Postives = 229/235 (97.45%), Query Frame = 0 

Query: 1   MEASLLSFTSFTPPSSSS-QILTLNRPTNPFSFSLPRHSTSQSRHYRGLKVAAAISRTKK 60
           MEASL++FTSFTPPSSSS QILTLNRPTNP SFSLPRHST+Q+RHYRGLKV+AAISRTKK
Sbjct: 1   MEASLITFTSFTPPSSSSTQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVSAAISRTKK 60

Query: 61  EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW 120
           EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW
Sbjct: 61  EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW 120

Query: 121 EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKAL 180
           EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPD+FKAL
Sbjct: 121 EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKAL 180

Query: 181 ETMPSRAEVYAKMLGLLQGPASSXXXXXXXXXXXXXXXXXXYVKKLEEQGGGAGQ 235
           ETMPSRAEVYAKMLGLLQ PAS XXXXXXXXXXXXXXXXXX V+KLEEQGGG GQ
Sbjct: 181 ETMPSRAEVYAKMLGLLQAPASXXXXXXXXXXXXXXXXXXXXVQKLEEQGGGGGQ 235

[Close]
BLAST of Cla97C02G039440 vs. TrEMBL
Match: tr|A0A1S3BDM0|A0A1S3BDM0_CUCME (50S ribosomal protein L10, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488738 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 3.0e-106
Identity = 220/234 (94.02%), Postives = 227/234 (97.01%), Query Frame = 0 

Query: 1   MEASLLSFTSFTPPSSSSQILTLNRPTNPFSFSLPRHSTSQSRHYRGLKVAAAISRTKKE 60
           MEASL+SFTSFTPP  SSQILTLNRPTNP SFSLPRHST+Q+RHYRGLKVAAAISRTKKE
Sbjct: 1   MEASLISFTSFTPP-PSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE 60

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVETVKQQLEDCYLLAGIKYKGFTVK+FQELRRSLPETSKLIVAKNTLVLKAIEGTSWE
Sbjct: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKEFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALE 180
           ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGK+YGPD+FKALE
Sbjct: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKFYGPDEFKALE 180

Query: 181 TMPSRAEVYAKMLGLLQGPASSXXXXXXXXXXXXXXXXXXYVKKLEEQGGGAGQ 235
           TMPSRAEVYAKMLGLLQ PAS XXXXXXXXXXXXXXXXXX V+KLEEQGGG GQ
Sbjct: 181 TMPSRAEVYAKMLGLLQAPASXXXXXXXXXXXXXXXXXXXXVQKLEEQGGGGGQ 233

[Close]
BLAST of Cla97C02G039440 vs. TrEMBL
Match: tr|A0A067LF88|A0A067LF88_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15458 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.1e-80
Identity = 162/231 (70.13%), Postives = 175/231 (75.76%), Query Frame = 0 

Query: 1   MEASLLSFTSFTPPSSSSQILTLNRPTNPFSFSLPRHSTSQSRHYRGLKVAAAISRTKKE 60
           ME +L SF S  P  S SQ L   R TNPFSFS P H  +    YR + + +AISRTKKE
Sbjct: 30  METTLFSFPSSKP--SPSQTLIQFRSTNPFSFSKPLHKPTS---YRPISINSAISRTKKE 89

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVETVK QLE+CYLLA IKY GFTVKQFQELRRSLPE+SKLIVAKNTLV KAIEGT WE
Sbjct: 90  ETVETVKTQLENCYLLAAIKYTGFTVKQFQELRRSLPESSKLIVAKNTLVYKAIEGTQWE 149

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALE 180
           ALKPCMKGMN WLFVH+EEIP AIKPYR+FQKEKKLEDNDFTGAVFEGK+YGP DFK LE
Sbjct: 150 ALKPCMKGMNAWLFVHTEEIPEAIKPYRNFQKEKKLEDNDFTGAVFEGKFYGPGDFKQLE 209

Query: 181 TMPSRAEVYAKMLGLLQGPASSXXXXXXXXXXXXXXXXXXYVKKLEEQGGG 232
           TMPSRAE+YAKMLG LQ PA                    YVKKLE++ GG
Sbjct: 210 TMPSRAEIYAKMLGALQSPAMGLVSTLQAPARDVIMVLKAYVKKLEDESGG 255

[Close]
BLAST of Cla97C02G039440 vs. TrEMBL
Match: tr|A0A2P5CTD8|A0A2P5CTD8_9ROSA (Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_273340 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.3e-77
Identity = 176/233 (75.54%), Postives = 194/233 (83.26%), Query Frame = 0 

Query: 1   MEASLLSFTSFTPPSSSSQILTLNRPTNPFSFSLPRHSTSQSRHYRGLKVAAAISRTKKE 60
           MEA LLSF S + PS  SQ LTL RPTNP     P H   +SR  R   V +AISR+KKE
Sbjct: 1   MEALLLSFPS-SIPSPHSQTLTLARPTNPLLSLTPSH--GRSRGTRLPTVRSAISRSKKE 60

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVE VKQ L++C+LLAGI YKGFTVKQFQ+LRRSLPE +KLIVAKNTLV KAIEGT WE
Sbjct: 61  ETVEAVKQNLDNCFLLAGISYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKAIEGTKWE 120

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALE 180
           AL+PCM GMN WLFVHSEEIPAAIKPYRDFQKE+KLE+NDFTGAVFEGK+YGP DFK LE
Sbjct: 121 ALRPCMTGMNAWLFVHSEEIPAAIKPYRDFQKERKLEENDFTGAVFEGKFYGPGDFKQLE 180

Query: 181 TMPSRAEVYAKMLGLLQGPASSXXXXXXXXXXXXXXXXXXYVKKLEEQGGGAG 234
           TMP+RAE+YAK+LG LQ PA  XXXXXXXXXXXXXXXXXXYV KLE++GGG G
Sbjct: 181 TMPTRAEIYAKLLGSLQAPAXXXXXXXXXXXXXXXXXXXXYVNKLEQEGGGGG 230

[Close]
BLAST of Cla97C02G039440 vs. TrEMBL
Match: tr|A0A2P5B6J9|A0A2P5B6J9_PARAD (Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_267080 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 8.4e-77
Identity = 175/233 (75.11%), Postives = 194/233 (83.26%), Query Frame = 0 

Query: 1   MEASLLSFTSFTPPSSSSQILTLNRPTNPFSFSLPRHSTSQSRHYRGLKVAAAISRTKKE 60
           MEA LLSF S +  S  SQ LT+ RPTN      P H   +SR  R   V +AISR+KKE
Sbjct: 1   MEALLLSFPS-SIRSPHSQTLTVTRPTNQLLSLTPSH--GRSRGTRLPTVRSAISRSKKE 60

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVE VKQ L++C+LLAGI YKGFTVKQFQ+LRRSLPE +KLIVAKNTLV KAIEGT WE
Sbjct: 61  ETVEAVKQNLDNCFLLAGISYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKAIEGTKWE 120

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALE 180
           AL+PCM GMN WLFVHSEEIPAAIKPYRDFQKE+KLE+NDFTGAVFEGK+YGP DFK LE
Sbjct: 121 ALRPCMTGMNAWLFVHSEEIPAAIKPYRDFQKERKLEENDFTGAVFEGKFYGPGDFKQLE 180

Query: 181 TMPSRAEVYAKMLGLLQGPASSXXXXXXXXXXXXXXXXXXYVKKLEEQGGGAG 234
           TMP+RAE+YAK+LG LQGPAS XXXXXXXXXXXXXXXXXXYV KLE++GGG G
Sbjct: 181 TMPTRAEIYAKLLGSLQGPASXXXXXXXXXXXXXXXXXXXYVNKLEQEGGGGG 230

[Close]
BLAST of Cla97C02G039440 vs. Swiss-Prot
Match: sp|O80362|RK10_TOBAC (50S ribosomal protein L10, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.5e-76
Identity = 148/223 (66.37%), Postives = 174/223 (78.03%), Query Frame = 0 

Query: 9   TSFTPPSSSSQILTLNRPTN-PFSFSLPRHSTSQSRHYRGLKVAAAISRTKKEETVETVK 68
           T FT PSS+S     +  ++   S +LP H   + +  + L + +AISRTKKEETVETVK
Sbjct: 4   TFFTLPSSTSHSYPFSLKSHFNNSLTLPTHPHFKPKS-KNLTIRSAISRTKKEETVETVK 63

Query: 69  QQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEALKPCMK 128
           QQLEDCYLLAGI YKG TVKQFQELR  LP+T+KL+VAKNTLVLKAIEGT WEALKPCMK
Sbjct: 64  QQLEDCYLLAGIGYKGLTVKQFQELRSQLPDTTKLLVAKNTLVLKAIEGTKWEALKPCMK 123

Query: 129 GMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAE 188
           GMN WLFVHSEEIPAA+KPYR FQKEKKLE+NDFTGAVFEGK+YGP++FKALET+P+RAE
Sbjct: 124 GMNAWLFVHSEEIPAALKPYRTFQKEKKLEENDFTGAVFEGKFYGPEEFKALETLPTRAE 183

Query: 189 VYAKMLGLLQGPASSXXXXXXXXXXXXXXXXXXYVKKLEEQGG 231
           +YA++LG L+GPAS+                  YVKKLEE+GG
Sbjct: 184 IYAQLLGSLKGPASAVVGTIQAPARNLVMVLKAYVKKLEEEGG 225

[Close]
BLAST of Cla97C02G039440 vs. Swiss-Prot
Match: sp|Q9FY50|RK10_ARATH (50S ribosomal protein L10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.1e-68
Identity = 138/229 (60.26%), Postives = 162/229 (70.74%), Query Frame = 0 

Query: 1   MEASLLSFTSFTPPSSSSQILTLNRPTNPFSFSLPRHSTSQSRHYRGLKV-AAAISRTKK 60
           ME +LLSF+S   P    +I TL               TS S +Y  L V  +A+SR KK
Sbjct: 1   MEVALLSFSSSLSPLCHQRISTLT------------PKTSNSPNYPRLPVIRSAVSRNKK 60

Query: 61  EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW 120
           EETVE VK  LE+C+LLA I YKG TVKQFQ+LRR+LP+T+KLIVAKNTLV KAIEGT W
Sbjct: 61  EETVEAVKSHLENCHLLAAINYKGLTVKQFQDLRRTLPDTTKLIVAKNTLVFKAIEGTKW 120

Query: 121 EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKAL 180
           EALKPCMKGMN WLFV ++EIP+AIKPYR FQKE+KLE+NDF GAVFEGK+Y PD+FK L
Sbjct: 121 EALKPCMKGMNAWLFVQTDEIPSAIKPYRSFQKERKLENNDFAGAVFEGKFYAPDNFKVL 180

Query: 181 ETMPSRAEVYAKMLGLLQGPASSXXXXXXXXXXXXXXXXXXYVKKLEEQ 229
           ETMP+RAEVYAKMLG LQ PA +                  Y+KKLE++
Sbjct: 181 ETMPTRAEVYAKMLGALQSPAINLVTTLQAPAREVIMVLMAYIKKLEDE 217

[Close]
BLAST of Cla97C02G039440 vs. Swiss-Prot
Match: sp|P82139|RK10_SPIOL (50S ribosomal protein L10, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL10 PE=1 SV=2)

HSP 1 Score: 251.5 bits (641), Expect = 9.0e-66
Identity = 139/203 (68.47%), Postives = 166/203 (81.77%), Query Frame = 0 

Query: 26  PTNPFSFSLPRHSTSQSRHYRGLKVAAAISRTKKEETVETVKQQLEDCYLLAGIKYKGFT 85
           P  P + + PR   +  +H     + AAISRTKKEETVETV++ LE+CYLLA I YKGFT
Sbjct: 29  PFKPNNLTFPR---TTHKHPTTTTITAAISRTKKEETVETVQKHLENCYLLAAINYKGFT 88

Query: 86  VKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEALKPCMKGMNVWLFVHSEEIPAAIK 145
           VKQFQ+LR++LPE + LIVAKNTLV KA++ T W A+KPCMKGMN WLFVHSEEIP AIK
Sbjct: 89  VKQFQDLRKALPENTTLIVAKNTLVEKAVQDTQWAAIKPCMKGMNAWLFVHSEEIPIAIK 148

Query: 146 PYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLQGPASSXXX 205
           PYR FQKE+KLEDNDFTGA FEGK+YGP + K LETMPS+AE++AK+LG L+ P S+XXX
Sbjct: 149 PYRTFQKERKLEDNDFTGACFEGKFYGPGEVKRLETMPSKAEIFAKLLGSLKSPGSAXXX 208

Query: 206 XXXXXXXXXXXXXXXYVKKLEEQ 229
           XXXXXXXXXXXXX  Y+KKLE++
Sbjct: 209 XXXXXXXXXXXXXKAYIKKLEDE 228

[Close]
BLAST of Cla97C02G039440 vs. Swiss-Prot
Match: sp|Q119S8|RL10_TRIEI (50S ribosomal protein L10 OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=rplJ PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.0e-17
Identity = 54/149 (36.24%), Postives = 86/149 (57.72%), Query Frame = 0 

Query: 55  SRTKKEETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSL-PETSKLIVAKNTLVLKA 114
           S+ +KEE +  +KQ L +  L   I Y+G +V +  +LRR L P  S   +AKNTL+  A
Sbjct: 4   SKKQKEEMLAGIKQNLSESQLALVINYQGLSVAEITDLRRRLIPTGSICSIAKNTLMGIA 63

Query: 115 I-EGTSWEALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYG 174
           + E ++W+ ++  + G N +LF+   +I  AIK Y+DFQK  K    +F G V EG+   
Sbjct: 64  VKEDSNWQPMEDLLAGSNAFLFL-KNDIGGAIKAYQDFQKATK--KTEFKGGVMEGRLLD 123

Query: 175 PDDFKALETMPSRAEVYAKMLGLLQGPAS 202
            D  KA+  +PS+ E+ A++ G +   A+
Sbjct: 124 KDQVKAIADLPSKEELLAQVAGAINNIAT 149

[Close]
BLAST of Cla97C02G039440 vs. Swiss-Prot
Match: sp|A2BUH9|RL10_PROM5 (50S ribosomal protein L10 OS=Prochlorococcus marinus (strain MIT 9515) OX=167542 GN=rplJ PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.9e-16
Identity = 52/146 (35.62%), Postives = 86/146 (58.90%), Query Frame = 0 

Query: 59  KEETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLI--VAKNTLVLKAIEG 118
           K++ V  +K  L+D  +   + YKG T+K+  +LR  L +T+K I  V KN+L+ KAI+G
Sbjct: 8   KQKIVTELKSLLDDSEMAVVLDYKGLTIKEMSDLRSRL-QTNKGICKVTKNSLMRKAIDG 67

Query: 119 TS-WEALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDD 178
            S W  L+  + G N ++ +  E++  A+K  + FQKE K   ++  GA+FEG+     +
Sbjct: 68  NSNWTDLESLLTGTNAFVLI-KEDVGGAVKAIQSFQKETK--KSETKGALFEGRLLSQSE 127

Query: 179 FKALETMPSRAEVYAKMLGLLQGPAS 202
            K + ++PSR  + AK+ G L G A+
Sbjct: 128 IKEIASLPSREVLMAKIAGALNGVAT 149

[Close]
BLAST of Cla97C02G039440 vs. TAIR10
Match: AT5G13510.1 (Ribosomal protein L10 family protein)

HSP 1 Score: 261.2 bits (666), Expect = 6.3e-70
Identity = 138/229 (60.26%), Postives = 162/229 (70.74%), Query Frame = 0 

Query: 1   MEASLLSFTSFTPPSSSSQILTLNRPTNPFSFSLPRHSTSQSRHYRGLKV-AAAISRTKK 60
           ME +LLSF+S   P    +I TL               TS S +Y  L V  +A+SR KK
Sbjct: 1   MEVALLSFSSSLSPLCHQRISTLT------------PKTSNSPNYPRLPVIRSAVSRNKK 60

Query: 61  EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW 120
           EETVE VK  LE+C+LLA I YKG TVKQFQ+LRR+LP+T+KLIVAKNTLV KAIEGT W
Sbjct: 61  EETVEAVKSHLENCHLLAAINYKGLTVKQFQDLRRTLPDTTKLIVAKNTLVFKAIEGTKW 120

Query: 121 EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKAL 180
           EALKPCMKGMN WLFV ++EIP+AIKPYR FQKE+KLE+NDF GAVFEGK+Y PD+FK L
Sbjct: 121 EALKPCMKGMNAWLFVQTDEIPSAIKPYRSFQKERKLENNDFAGAVFEGKFYAPDNFKVL 180

Query: 181 ETMPSRAEVYAKMLGLLQGPASSXXXXXXXXXXXXXXXXXXYVKKLEEQ 229
           ETMP+RAEVYAKMLG LQ PA +                  Y+KKLE++
Sbjct: 181 ETMPTRAEVYAKMLGALQSPAINLVTTLQAPAREVIMVLMAYIKKLEDE 217

[Close]
BLAST of Cla97C02G039440 vs. TAIR10
Match: AT3G12370.1 (Ribosomal protein L10 family protein)

HSP 1 Score: 179.1 bits (453), Expect = 3.2e-45
Identity = 87/136 (63.97%), Postives = 103/136 (75.74%), Query Frame = 0 

Query: 67  KQQLEDCYLLAGIKYKGFTVKQFQELRRSLPE--TSKLIVAKNTLVLKAIEGTSWEALKP 126
           K  LE+C+ + GI Y G +VKQ QELR  L E   +KL+VAKNTLV KA+EGT WE+LKP
Sbjct: 15  KINLENCHFITGINYNGLSVKQLQELRGILRENTNTKLLVAKNTLVYKALEGTKWESLKP 74

Query: 127 CMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPS 186
           CMKGMN WLFV SE+IPAA+K + +FQKEKKL DN+  GAVFE K Y P D+K +ETMPS
Sbjct: 75  CMKGMNAWLFVQSEDIPAALKTFINFQKEKKLYDNNLGGAVFEEKLYAPQDYKVIETMPS 134

Query: 187 RAEVYAKMLGLLQGPA 201
           RA+VY  MLG L  PA
Sbjct: 135 RADVYGMMLGSLHWPA 150

The following BLAST results are available for this feature:
BLAST of Cla97C02G039440 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004143603.13.1e-10794.47PREDICTED: 50S ribosomal protein L10, chloroplastic [Cucumis sativus] >KGN50478.... [more]
XP_008445837.14.5e-10694.02PREDICTED: 50S ribosomal protein L10, chloroplastic [Cucumis melo][more]
XP_022990377.16.1e-10385.4750S ribosomal protein L10, chloroplastic [Cucurbita maxima][more]
XP_023523503.11.1e-10184.1950S ribosomal protein L10, chloroplastic [Cucurbita pepo subsp. pepo][more]
XP_022943219.12.4e-9984.2850S ribosomal protein L10, chloroplastic [Cucurbita moschata][more]
BLAST of Cla97C02G039440 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KLL5|A0A0A0KLL5_CUCSA2.1e-10794.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176000 PE=3 SV=1[more]
tr|A0A1S3BDM0|A0A1S3BDM0_CUCME3.0e-10694.0250S ribosomal protein L10, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488738... [more]
tr|A0A067LF88|A0A067LF88_JATCU2.1e-8070.13Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15458 PE=3 SV=1[more]
tr|A0A2P5CTD8|A0A2P5CTD8_9ROSA1.3e-7775.54Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_273340 PE=3 SV=1[more]
tr|A0A2P5B6J9|A0A2P5B6J9_PARAD8.4e-7775.11Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_267080 PE=3 SV=... [more]
BLAST of Cla97C02G039440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O80362|RK10_TOBAC1.5e-7666.3750S ribosomal protein L10, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL10 P... [more]
sp|Q9FY50|RK10_ARATH1.1e-6860.2650S ribosomal protein L10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1... [more]
sp|P82139|RK10_SPIOL9.0e-6668.4750S ribosomal protein L10, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL10 P... [more]
sp|Q119S8|RL10_TRIEI2.0e-1736.2450S ribosomal protein L10 OS=Trichodesmium erythraeum (strain IMS101) OX=203124 ... [more]
sp|A2BUH9|RL10_PROM52.9e-1635.6250S ribosomal protein L10 OS=Prochlorococcus marinus (strain MIT 9515) OX=167542... [more]
BLAST of Cla97C02G039440 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G13510.16.3e-7060.26Ribosomal protein L10 family protein[more]
AT3G12370.13.2e-4563.97Ribosomal protein L10 family protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: INTERPRO
TermDefinition
IPR022973Ribosomal_L10
IPR001790Ribosomal_L10P
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
cellular_component GO:0009507 chloroplast
cellular_component GO:0015934 large ribosomal subunit
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G039440.1Cla97C02G039440.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.70.1730coord: 54..199
e-value: 2.0E-34
score: 120.9
NoneNo IPR availablePANTHERPTHR11560FAMILY NOT NAMEDcoord: 28..229
NoneNo IPR availableCDDcd05797Ribosomal_L10coord: 55..212
e-value: 1.87777E-47
score: 155.355
NoneNo IPR availableSUPERFAMILYSSF160369Ribosomal protein L10-likecoord: 56..224
IPR001790Ribosomal protein L10PPFAMPF00466Ribosomal_L10coord: 56..151
e-value: 1.3E-20
score: 73.2
IPR022973Ribosomal protein L10HAMAPMF_00362Ribosomal_L10coord: 54..214
score: 18.625

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C02G039440Cla020083Watermelon (97103) v1wmwmbB316
Cla97C02G039440Csa5G176000Cucumber (Chinese Long) v2cuwmbB368
Cla97C02G039440MELO3C011720Melon (DHL92) v3.5.1mewmbB053
Cla97C02G039440ClCG02G013790Watermelon (Charleston Gray)wcgwmbB138
Cla97C02G039440CSPI05G08950Wild cucumber (PI 183967)cpiwmbB385
Cla97C02G039440Cucsa.165910Cucumber (Gy14) v1cgywmbB290
Cla97C02G039440CmaCh04G002590Cucurbita maxima (Rimu)cmawmbB741
Cla97C02G039440CmoCh04G002670Cucurbita moschata (Rifu)cmowmbB714
Cla97C02G039440Lsi04G008230Bottle gourd (USVL1VR-Ls)lsiwmbB275
Cla97C02G039440CsGy5G006310Cucumber (Gy14) v2cgybwmbB351
Cla97C02G039440MELO3C011720.2Melon (DHL92) v3.6.1medwmbB050
Cla97C02G039440Carg23761Silver-seed gourdcarwmbB0902
Cla97C02G039440CsaV3_5G006380Cucumber (Chinese Long) v3cucwmbB383
Cla97C02G039440Bhi07G000866Wax gourdwgowmbB526
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G039440Watermelon (97103) v2wmbwmbB049
Cla97C02G039440Watermelon (97103) v2wmbwmbB100
Cla97C02G039440Silver-seed gourdcarwmbB0166
Cla97C02G039440Silver-seed gourdcarwmbB0874
Cla97C02G039440Cucumber (Gy14) v2cgybwmbB188
Cla97C02G039440Cucumber (Gy14) v1cgywmbB531
Cla97C02G039440Cucurbita maxima (Rimu)cmawmbB740
Cla97C02G039440Cucurbita maxima (Rimu)cmawmbB853
Cla97C02G039440Cucurbita moschata (Rifu)cmowmbB713
Cla97C02G039440Cucurbita moschata (Rifu)cmowmbB829
Cla97C02G039440Wild cucumber (PI 183967)cpiwmbB202
Cla97C02G039440Cucumber (Chinese Long) v3cucwmbB199
Cla97C02G039440Cucumber (Chinese Long) v2cuwmbB197
Cla97C02G039440Bottle gourd (USVL1VR-Ls)lsiwmbB230
Cla97C02G039440Melon (DHL92) v3.6.1medwmbB315
Cla97C02G039440Melon (DHL92) v3.5.1mewmbB327
Cla97C02G039440Watermelon (Charleston Gray)wcgwmbB045
Cla97C02G039440Watermelon (97103) v1wmwmbB064
Cla97C02G039440Watermelon (97103) v1wmwmbB289
Cla97C02G039440Wax gourdwgowmbB032
Cla97C02G039440Wax gourdwgowmbB417