Cla97C01G012880 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G012880
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family, putative
Location	Cla97Chr01 : 26541189 .. 26541782 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGGTCCTCCACAGCCACAGTCGCGAGCTGGCCCCTCGAGGATATTGCGCTTCGTCGCATTGTTCATAGTGGCATTGATAGTACTCGTTGGGCTTGCCGTGCTCATTATTTGGCTGACCATTAGGCCGAAACGACTAAGCTACACAGTGGAAAGTGCTTCGGTCCACAACTTCGACATGACCGACACTCAACTCAACGCCTCCTTTAGCTTTGGGGTAAGAGCATATAATCCCAATAAACGAGTCTCGGTTTACTATGATTCCATCACCGCCACCGTTGGCTTCGGCGATCAAGACTTGGCATTTGGCGTGCTCAATCCCTTCTACCAACCTCACAAAAACGAGCAATGGTTGAACATCAACCTCAACGCTCAGAACTTTCTATTGCATGACTCTGTGTCGAAGGACTTGGCGCTCGAAAAGGCGGCGGGAGAGATGGATTTGGATCTTTGGATCAAGGCAAGAATTAGGTTTAAGGTCGGGGTATGGAAGTCCGCGCATAGGACGCTTCGAATCCGGTGTTCGCCAGTGATTGTTTACTTGTCTAAATCCAAGACTTTCAAGAAGACTACTTGCTTTACAGAAGTCTAA

mRNA sequence

ATGGCAGGTCCTCCACAGCCACAGTCGCGAGCTGGCCCCTCGAGGATATTGCGCTTCGTCGCATTGTTCATAGTGGCATTGATAGTACTCGTTGGGCTTGCCGTGCTCATTATTTGGCTGACCATTAGGCCGAAACGACTAAGCTACACAGTGGAAAGTGCTTCGGTCCACAACTTCGACATGACCGACACTCAACTCAACGCCTCCTTTAGCTTTGGGGTAAGAGCATATAATCCCAATAAACGAGTCTCGGTTTACTATGATTCCATCACCGCCACCGTTGGCTTCGGCGATCAAGACTTGGCATTTGGCGTGCTCAATCCCTTCTACCAACCTCACAAAAACGAGCAATGGTTGAACATCAACCTCAACGCTCAGAACTTTCTATTGCATGACTCTGTGTCGAAGGACTTGGCGCTCGAAAAGGCGGCGGGAGAGATGGATTTGGATCTTTGGATCAAGGCAAGAATTAGGTTTAAGGTCGGGGTATGGAAGTCCGCGCATAGGACGCTTCGAATCCGGTGTTCGCCAGTGATTGTTTACTTGTCTAAATCCAAGACTTTCAAGAAGACTACTTGCTTTACAGAAGTCTAA

Coding sequence (CDS)

ATGGCAGGTCCTCCACAGCCACAGTCGCGAGCTGGCCCCTCGAGGATATTGCGCTTCGTCGCATTGTTCATAGTGGCATTGATAGTACTCGTTGGGCTTGCCGTGCTCATTATTTGGCTGACCATTAGGCCGAAACGACTAAGCTACACAGTGGAAAGTGCTTCGGTCCACAACTTCGACATGACCGACACTCAACTCAACGCCTCCTTTAGCTTTGGGGTAAGAGCATATAATCCCAATAAACGAGTCTCGGTTTACTATGATTCCATCACCGCCACCGTTGGCTTCGGCGATCAAGACTTGGCATTTGGCGTGCTCAATCCCTTCTACCAACCTCACAAAAACGAGCAATGGTTGAACATCAACCTCAACGCTCAGAACTTTCTATTGCATGACTCTGTGTCGAAGGACTTGGCGCTCGAAAAGGCGGCGGGAGAGATGGATTTGGATCTTTGGATCAAGGCAAGAATTAGGTTTAAGGTCGGGGTATGGAAGTCCGCGCATAGGACGCTTCGAATCCGGTGTTCGCCAGTGATTGTTTACTTGTCTAAATCCAAGACTTTCAAGAAGACTACTTGCTTTACAGAAGTCTAA

Protein sequence

MAGPPQPQSRAGPSRILRFVALFIVALIVLVGLAVLIIWLTIRPKRLSYTVESASVHNFDMTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLNPFYQPHKNEQWLNINLNAQNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIVYLSKSKTFKKTTCFTEV

Homology

[Close]

BLAST of Cla97C01G012880 vs. NCBI nr
Match: XP_008464346.1 (PREDICTED: uncharacterized protein At1g08160 [Cucumis melo])

HSP 1 Score: 372.5 bits (955), Expect = 9.0e-100
Identity = 185/197 (93.91%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MAGPPQPQSRAGPSRILRFVALFIVALIVLVGLAVLIIWLTIRPKRLSYTVESASVHNFD 60
           MAGPPQP SRAGPSRILRFV +F+VALI+LVGLAVLIIWLTIRPKRLSYTVESA VHNFD
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLNPFYQPHKNEQWLN 120
           MT+TQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVL+PFYQPHK+EQWLN
Sbjct: 61  MTNTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWLN 120

Query: 121 INLNAQNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           I+LNAQNFLLHDSVSKDLALE++AGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSKSKTFKKTTCFTEV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of Cla97C01G012880 vs. NCBI nr
Match: XP_011654115.1 (PREDICTED: uncharacterized protein At1g08160 [Cucumis sativus] >KGN64862.1 hypothetical protein Csa_1G132720 [Cucumis sativus])

HSP 1 Score: 371.7 bits (953), Expect = 1.5e-99
Identity = 183/197 (92.89%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MAGPPQPQSRAGPSRILRFVALFIVALIVLVGLAVLIIWLTIRPKRLSYTVESASVHNFD 60
           MAGPPQP SR+GPSRILRFV +F+VALI+LVGLAVLIIWLT+RPKRLSYTVESA VHNFD
Sbjct: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLNPFYQPHKNEQWLN 120
           MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDL+FGVL+PFYQPHKNEQWLN
Sbjct: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120

Query: 121 INLNAQNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           I+LNAQNFLLHDSVSK+LALE++AGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSKSKTFKKTTCFTEV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of Cla97C01G012880 vs. NCBI nr
Match: XP_022937555.1 (uncharacterized protein At1g08160 [Cucurbita moschata] >XP_023537506.1 uncharacterized protein At1g08160 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 299.3 bits (765), Expect = 9.7e-78
Identity = 148/197 (75.13%), Postives = 162/197 (82.23%), Query Frame = 0


Query: 1   MAGPPQPQSRAGPSRILRFVALFIVALIVLVGLAVLIIWLTIRPKRLSYTVESASVHNFD 60
           MAGPPQ  SR     ILR+V L                WLT+RPKRLSYTVESA+VHNFD
Sbjct: 1   MAGPPQLSSRPARPNILRYVILXXXXXXXXXXXXXXXXWLTVRPKRLSYTVESAAVHNFD 60

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLNPFYQPHKNEQWLN 120
           M+ TQLNASF+FGV+AYNPN+ VSVYYD +T TVGFGDQDLAFGV+ PFYQPHK+  WLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 INLNAQNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           ++LNA+NFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKS HRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSK K FK+T CFTEV
Sbjct: 181 YLSKDKEFKRTACFTEV 197

[Close]

BLAST of Cla97C01G012880 vs. NCBI nr
Match: XP_022969533.1 (uncharacterized protein At1g08160 [Cucurbita maxima])

HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75
Identity = 144/197 (73.10%), Postives = 159/197 (80.71%), Query Frame = 0


Query: 1   MAGPPQPQSRAGPSRILRFVALFIVALIVLVGLAVLIIWLTIRPKRLSYTVESASVHNFD 60
           MAGPPQ   R     ILR+V L                WLT+RPKRL YTVESA+VHNFD
Sbjct: 1   MAGPPQLSPRPARPNILRYVILXXXXXXXXXXXXXXXXWLTVRPKRLRYTVESAAVHNFD 60

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLNPFYQPHKNEQWLN 120
           M+ TQLNASF+FGV+AYNPN+ VSVYYD +T TVGFGDQDLAFGV+ PFYQPHK+  WLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 INLNAQNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           ++LNA+NFLLHDSVSKDLALEKAAGEMDLDLWIKARIR+KVGVWK  HRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRYKVGVWKLGHRTLRIRCSPVIV 180

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSK K FK+T CFTEV
Sbjct: 181 YLSKDKEFKRTACFTEV 197

[Close]

BLAST of Cla97C01G012880 vs. NCBI nr
Match: XP_022152939.1 (uncharacterized protein At1g08160 [Momordica charantia])

HSP 1 Score: 285.8 bits (730), Expect = 1.1e-73
Identity = 145/197 (73.60%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 1   MAGPPQPQSRAGPSRILRFVALFIVALIVLVGLAVLIIWLTIRPKRLSYTVESASVHNFD 60
           MAGPPQP   +G SR+LR VAL ++      GLAVLIIWLT+RPKRLSYTVESASV NFD
Sbjct: 1   MAGPPQPPP-SGRSRVLRCVALVLLXXXXXXGLAVLIIWLTVRPKRLSYTVESASVQNFD 60

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLNPFYQPHKNEQWLN 120
           +++TQLNASF+F VRAYNPN RVSVYYD I  TVGFGDQDLA+G +NPFYQPHK    L+
Sbjct: 61  LSNTQLNASFNFRVRAYNPNSRVSVYYDKILVTVGFGDQDLAYGTINPFYQPHKGVTRLD 120

Query: 121 INLNAQNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           IN  AQN  L++SVSKDL LEKAAGEMDLDLWIKA+IRFKVG+WKS H+TLRI CSPVI+
Sbjct: 121 INPAAQNVPLYNSVSKDLGLEKAAGEMDLDLWIKAKIRFKVGIWKSGHQTLRIHCSPVII 180

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSKSK F +TTCF EV
Sbjct: 181 YLSKSKPFNETTCFAEV 196

[Close]

BLAST of Cla97C01G012880 vs. TrEMBL
Match: tr|A0A1S3CLP6|A0A1S3CLP6_CUCME (uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103502251 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 6.0e-100
Identity = 185/197 (93.91%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MAGPPQPQSRAGPSRILRFVALFIVALIVLVGLAVLIIWLTIRPKRLSYTVESASVHNFD 60
           MAGPPQP SRAGPSRILRFV +F+VALI+LVGLAVLIIWLTIRPKRLSYTVESA VHNFD
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLNPFYQPHKNEQWLN 120
           MT+TQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVL+PFYQPHK+EQWLN
Sbjct: 61  MTNTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWLN 120

Query: 121 INLNAQNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           I+LNAQNFLLHDSVSKDLALE++AGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSKSKTFKKTTCFTEV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of Cla97C01G012880 vs. TrEMBL
Match: tr|A0A0A0LVK3|A0A0A0LVK3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132720 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.0e-99
Identity = 183/197 (92.89%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MAGPPQPQSRAGPSRILRFVALFIVALIVLVGLAVLIIWLTIRPKRLSYTVESASVHNFD 60
           MAGPPQP SR+GPSRILRFV +F+VALI+LVGLAVLIIWLT+RPKRLSYTVESA VHNFD
Sbjct: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60

Query: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLNPFYQPHKNEQWLN 120
           MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDL+FGVL+PFYQPHKNEQWLN
Sbjct: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120

Query: 121 INLNAQNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180
           I+LNAQNFLLHDSVSK+LALE++AGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKSKTFKKTTCFTEV 198
           YLSKSKTFKKTTCFTEV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of Cla97C01G012880 vs. TrEMBL
Match: tr|A0A2P5DD23|A0A2P5DD23_9ROSA (Late embryogenesis abundant protein OS=Trema orientalis OX=63057 GN=TorRG33x02_254850 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.4e-56
Identity = 116/198 (58.59%), Postives = 150/198 (75.76%), Query Frame = 0


Query: 5   PQPQSRAGPSR----ILRFVALFIVALIVLVGLAVLIIWLTIRPKRLSYTVESASVHNFD 64
           PQ  +   P R    ILR+VA F +ALIVLVG+AVLIIWL I+PKRL ++VE  SVHNF+
Sbjct: 7   PQQTTVTKPPRQRPHILRWVATFFLALIVLVGIAVLIIWLVIKPKRLVFSVEDGSVHNFN 66

Query: 65  MT-DTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLNPFYQPHKNEQWL 124
           ++ D  LNASF+F VR+YNPN RVS+YYDSI + V + DQ LAF V++PF+QPH+N   L
Sbjct: 67  ISNDNHLNASFNFVVRSYNPNSRVSIYYDSIESRVDYDDQTLAFNVVDPFFQPHRNVTRL 126

Query: 125 NINLNAQNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVI 184
            + L AQ+  L  SVSKD+ +EK++GEM+LDLW+KARIRFKVG WKS+HRTLR+ CSPV+
Sbjct: 127 QVKLAAQSTALLGSVSKDIKMEKSSGEMELDLWLKARIRFKVGAWKSSHRTLRVSCSPVV 186

Query: 185 VYLSKSKTFKKTTCFTEV 198
           V+ S+ K F +  C  E+
Sbjct: 187 VHFSRPKAFNRALCDVEL 204

[Close]

BLAST of Cla97C01G012880 vs. TrEMBL
Match: tr|W9S3V4|W9S3V4_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011767 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 6.9e-56
Identity = 109/195 (55.90%), Postives = 149/195 (76.41%), Query Frame = 0


Query: 6   QPQSRAGPSR---ILRFVALFIVALIVLVGLAVLIIWLTIRPKRLSYTVESASVHNFDMT 65
           +P   A P R   ILR++A+F +ALIVLVG+AVL+IWL +RPKRL Y+VE AS+HNF++ 
Sbjct: 17  EPTREANPQRKPHILRWIAMFFLALIVLVGIAVLVIWLVVRPKRLVYSVEDASIHNFNIN 76

Query: 66  DTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLNPFYQPHKNEQWLNIN 125
           +  LNASF F VR+YNPN +VS+YYD I + V + DQ LA+ ++ PF+QPHKN   L + 
Sbjct: 77  NNHLNASFDFVVRSYNPNSKVSIYYDKIESRVEYDDQTLAYNMVEPFFQPHKNVTRLELK 136

Query: 126 LNAQNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIVYL 185
           L AQ+  L  S+  DL LEK++GE++L++W+KARIRFKVG WKS+HRTL+I CSPV+V+ 
Sbjct: 137 LAAQSVPLVGSIPADLRLEKSSGEIELNVWLKARIRFKVGAWKSSHRTLKIFCSPVLVHF 196

Query: 186 SKSKTFKKTTCFTEV 198
           S+SK F++T C  E+
Sbjct: 197 SRSKNFERTVCDVEL 211

[Close]

BLAST of Cla97C01G012880 vs. TrEMBL
Match: tr|K7M1R4|K7M1R4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100801370 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 5.9e-55
Identity = 111/203 (54.68%), Postives = 154/203 (75.86%), Query Frame = 0


Query: 1   MAGPP-QPQSRAG----PSRILRFVALFIVALIVLVGLAVLIIWLTIRPKRLSYTVESAS 60
           MA PP Q QSRA      S +LR +A+FI+ALI+LVG+AV+IIWL ++PKRL YTVE+A+
Sbjct: 1   MAHPPTQSQSRAANKPKRSNLLRCIAIFILALIILVGIAVIIIWLVLKPKRLEYTVENAA 60

Query: 61  VHNFDMTD-TQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLNPFYQPHK 120
           +HNF++TD   L A+F F +R+YNPN RVS+YYD++  +V + DQ LA   + PF+Q HK
Sbjct: 61  IHNFNLTDANHLYANFDFTIRSYNPNSRVSIYYDTVEVSVRYEDQTLATNAVQPFFQSHK 120

Query: 121 NEQWLNINLNAQNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSAHRTLRIR 180
           N   L++ L AQ   L+DSV KDL LE+++G+++LD+W++ARIRFKVGVWKS HR L+I 
Sbjct: 121 NVTRLHVGLTAQTVALYDSVPKDLRLERSSGDIELDVWMRARIRFKVGVWKSKHRVLKIF 180

Query: 181 CSPVIVYLSKSKTFKKTTCFTEV 198
           CSPV+V+ SK K+F++  C  E+
Sbjct: 181 CSPVLVHFSKGKSFERAPCDVEL 203

[Close]

BLAST of Cla97C01G012880 vs. Swiss-Prot
Match: sp|Q8VZ13|Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.5e-25
Identity = 62/166 (37.35%), Postives = 102/166 (61.45%), Query Frame = 0


Query: 36  LIIWLTIRPKRLSYTVESASVHNFDM--TDTQLNASFSFGVRAYNPNKRVSVYYDSITAT 95
           LI +LT+RPKRL YTVE+ASV  F +   D  +NA FS+ +++YNP K VSV Y S+  +
Sbjct: 56  LITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRIS 115

Query: 96  VGFGDQDLAFGVLNPFYQPHKNEQWLNINLNAQNFLLHDSVSKDLALEKAAGEMDLDLWI 155
               +Q +A   ++PF Q  KNE  +   L + N  L    ++DL  EK+ G ++++++I
Sbjct: 116 TAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYI 175

Query: 156 KARIRFKVGVWKSAHRTLRIRCSPVIVYLSKSKT--FKKTTCFTEV 198
            AR+ +K  +++S  RTL+  C+PV++ ++ S    F++  C T +
Sbjct: 176 TARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

[Close]

BLAST of Cla97C01G012880 vs. Swiss-Prot
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.0e-19
Identity = 63/192 (32.81%), Postives = 100/192 (52.08%), Query Frame = 0


Query: 4   PPQPQS--RAGPSR-----ILRFVALFIVALIVLVGLAVLIIWLTIRPKRLSYTVESASV 63
           PP P+   R G  R     +L      I++LIV++G+A LI WL +RP+ + + V  AS+
Sbjct: 18  PPAPKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASL 77

Query: 64  HNFDMT--DTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLNPFYQPHK 123
             FD T  D  L  + +  V   NPNKR+ +YYD I A   +  +  +   L PFYQ HK
Sbjct: 78  TRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHK 137

Query: 124 NEQWLNINLNAQNFLLHDS-VSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSAHRTLRI 183
           N   L      QN ++ ++  S+ L  E+ +G  ++++  + R+RFK+G  K      ++
Sbjct: 138 NTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKV 197

Query: 184 RCSPVIVYLSKS 186
            C  + + LS S
Sbjct: 198 DCDDLRLPLSTS 209

[Close]

BLAST of Cla97C01G012880 vs. Swiss-Prot
Match: sp|Q9FI03|NHL26_ARATH (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.5e-13
Identity = 37/153 (24.18%), Postives = 78/153 (50.98%), Query Frame = 0


Query: 33  LAVLIIWLTIRPKRLSYTVESASVHNFDMTDTQ---LNASFSFGVRAYNPNKRVSVYYDS 92
           L + ++WL + P+R  +++  A +++ ++T +    LN+S    + + NPNK+V +YYD 
Sbjct: 40  LIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDK 99

Query: 93  ITATVGF-GDQDLAFGVLNPFYQPHKNEQWLNINLNAQNFLLHDSVSKDLALEKAAGEMD 152
           +     + G Q  +   L PFYQ H+    L   L      +  S    ++ E++ G++ 
Sbjct: 100 LLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKII 159

Query: 153 LDLWIKARIRFKVGVWKSAHRTLRIRCSPVIVY 182
           + + +  ++R+K+G W S      + C  ++ +
Sbjct: 160 IGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAF 192

[Close]

BLAST of Cla97C01G012880 vs. Swiss-Prot
Match: sp|Q9FNH6|NHL3_ARATH (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.3e-13
Identity = 58/170 (34.12%), Postives = 83/170 (48.82%), Query Frame = 0


Query: 34  AVLIIWLTIRPKRLSYTVESASVHNFDMTDT---QLNASFSFGVRAYNPNKRVSVYYDSI 93
           A LIIWL  RP  + + V  A +  F +  T   + N   +F +R  NPN+R+ VYYD I
Sbjct: 62  AALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIR--NPNRRIGVYYDEI 121

Query: 94  TATVGFGDQDLAFGVLN---PFYQPHKNEQWLNINLNAQNFLLHD-SVSKDLALEKAAGE 153
                +GDQ   FG+ N    FYQ HKN   +   L  Q  +L D    KDL  +  +  
Sbjct: 122 EVRGYYGDQ--RFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQI 181

Query: 154 MDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIVYLSKSKT---FKKTTC 194
             +D  ++ +IRFK G+ KS     +I+C   +   S S +   F+ T C
Sbjct: 182 YRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQPTKC 227

[Close]

BLAST of Cla97C01G012880 vs. TAIR10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 158.3 bits (399), Expect = 4.9e-39
Identity = 82/195 (42.05%), Postives = 129/195 (66.15%), Query Frame = 0


Query: 4   PPQPQSRAGPSRILRFVALFIVALIVLVGLAVLIIWLTIRPKRLSYTVESASVHNFDMT- 63
           P QP  R  PS ++ ++ L I+ LI +  +  LI WL  +PK+L YTVE+ASV NF++T 
Sbjct: 16  PAQPLRR--PS-LICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTN 75

Query: 64  DTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLNPFYQPHKNEQWLNIN 123
           D  ++A+F F ++++NPN R+SVYY S+   V F DQ LAF  + PF+QP  N + ++  
Sbjct: 76  DNHMSATFQFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDET 135

Query: 124 LNAQNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIVYL 183
           L A+N  +  S  KDL  + + G++  ++++KAR+RFKVG+WKS+HRT +I+CS V V L
Sbjct: 136 LIAENVAVSKSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSL 195

Query: 184 SKSKTFKKTTCFTEV 198
           S+    + ++C  ++
Sbjct: 196 SQPNKSQNSSCDADI 207

[Close]

BLAST of Cla97C01G012880 vs. TAIR10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 115.5 bits (288), Expect = 3.6e-26
Identity = 62/166 (37.35%), Postives = 102/166 (61.45%), Query Frame = 0


Query: 36  LIIWLTIRPKRLSYTVESASVHNFDM--TDTQLNASFSFGVRAYNPNKRVSVYYDSITAT 95
           LI +LT+RPKRL YTVE+ASV  F +   D  +NA FS+ +++YNP K VSV Y S+  +
Sbjct: 56  LITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRIS 115

Query: 96  VGFGDQDLAFGVLNPFYQPHKNEQWLNINLNAQNFLLHDSVSKDLALEKAAGEMDLDLWI 155
               +Q +A   ++PF Q  KNE  +   L + N  L    ++DL  EK+ G ++++++I
Sbjct: 116 TAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYI 175

Query: 156 KARIRFKVGVWKSAHRTLRIRCSPVIVYLSKSKT--FKKTTCFTEV 198
            AR+ +K  +++S  RTL+  C+PV++ ++ S    F++  C T +
Sbjct: 176 TARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

[Close]

BLAST of Cla97C01G012880 vs. TAIR10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 95.5 bits (236), Expect = 3.9e-20
Identity = 63/192 (32.81%), Postives = 100/192 (52.08%), Query Frame = 0


Query: 4   PPQPQS--RAGPSR-----ILRFVALFIVALIVLVGLAVLIIWLTIRPKRLSYTVESASV 63
           PP P+   R G  R     +L      I++LIV++G+A LI WL +RP+ + + V  AS+
Sbjct: 18  PPAPKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASL 77

Query: 64  HNFDMT--DTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLNPFYQPHK 123
             FD T  D  L  + +  V   NPNKR+ +YYD I A   +  +  +   L PFYQ HK
Sbjct: 78  TRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHK 137

Query: 124 NEQWLNINLNAQNFLLHDS-VSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSAHRTLRI 183
           N   L      QN ++ ++  S+ L  E+ +G  ++++  + R+RFK+G  K      ++
Sbjct: 138 NTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKV 197

Query: 184 RCSPVIVYLSKS 186
            C  + + LS S
Sbjct: 198 DCDDLRLPLSTS 209

[Close]

BLAST of Cla97C01G012880 vs. TAIR10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-16
Identity = 46/167 (27.54%), Postives = 85/167 (50.90%), Query Frame = 0


Query: 14  SRILRFVALFIVALIVLVGLAVLIIWLTIRPKRLSYTVESASVHNFDMTDTQLNASFSFG 73
           +RI +F+    + ++  VG+   I+WL++RP R  + ++   V   D      NA  +F 
Sbjct: 40  TRISKFICAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPTGVENARIAFN 99

Query: 74  VRAYNPNKRVSVYYDSITATVGFGDQDLA-FGVLNPFYQPHKNEQWLNINLNAQNFLLHD 133
           V   NPN+ + VY+DS+  ++ + DQ +    +LNPF+Q   N   +   L   +  ++ 
Sbjct: 100 VTILNPNQHMGVYFDSMEGSIYYKDQRVGLIPLLNPFFQQPTNTTIVTGTLTGASLTVNS 159

Query: 134 SVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVI 180
           +   + + ++A G +   L I + IRFK+  W S H  +   C+ V+
Sbjct: 160 NRWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVV 206

[Close]

BLAST of Cla97C01G012880 vs. TAIR10
Match: AT5G53730.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 77.8 bits (190), Expect = 8.3e-15
Identity = 37/153 (24.18%), Postives = 78/153 (50.98%), Query Frame = 0


Query: 33  LAVLIIWLTIRPKRLSYTVESASVHNFDMTDTQ---LNASFSFGVRAYNPNKRVSVYYDS 92
           L + ++WL + P+R  +++  A +++ ++T +    LN+S    + + NPNK+V +YYD 
Sbjct: 40  LIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDK 99

Query: 93  ITATVGF-GDQDLAFGVLNPFYQPHKNEQWLNINLNAQNFLLHDSVSKDLALEKAAGEMD 152
           +     + G Q  +   L PFYQ H+    L   L      +  S    ++ E++ G++ 
Sbjct: 100 LLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKII 159

Query: 153 LDLWIKARIRFKVGVWKSAHRTLRIRCSPVIVY 182
           + + +  ++R+K+G W S      + C  ++ +
Sbjct: 160 IGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAF 192

The following BLAST results are available for this feature:

BLAST of Cla97C01G012880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464346.1	9.0e-100	93.91	PREDICTED: uncharacterized protein At1g08160 [Cucumis melo]	[more]
XP_011654115.1	1.5e-99	92.89	PREDICTED: uncharacterized protein At1g08160 [Cucumis sativus] >KGN64862.1 hypot...	[more]
XP_022937555.1	9.7e-78	75.13	uncharacterized protein At1g08160 [Cucurbita moschata] >XP_023537506.1 uncharact...	[more]
XP_022969533.1	1.6e-75	73.10	uncharacterized protein At1g08160 [Cucurbita maxima]	[more]
XP_022152939.1	1.1e-73	73.60	uncharacterized protein At1g08160 [Momordica charantia]	[more]

BLAST of Cla97C01G012880 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CLP6\|A0A1S3CLP6_CUCME	6.0e-100	93.91	uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103502251 PE=4 S...	[more]
tr\|A0A0A0LVK3\|A0A0A0LVK3_CUCSA	1.0e-99	92.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132720 PE=4 SV=1	[more]
tr\|A0A2P5DD23\|A0A2P5DD23_9ROSA	2.4e-56	58.59	Late embryogenesis abundant protein OS=Trema orientalis OX=63057 GN=TorRG33x02_2...	[more]
tr\|W9S3V4\|W9S3V4_9ROSA	6.9e-56	55.90	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011767 PE=4 SV=1	[more]
tr\|K7M1R4\|K7M1R4_SOYBN	5.9e-55	54.68	Uncharacterized protein OS=Glycine max OX=3847 GN=100801370 PE=4 SV=1	[more]

BLAST of Cla97C01G012880 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8VZ13\|Y1816_ARATH	6.5e-25	37.35	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]
sp\|Q9SJ52\|NHL10_ARATH	7.0e-19	32.81	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
sp\|Q9FI03\|NHL26_ARATH	1.5e-13	24.18	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
sp\|Q9FNH6\|NHL3_ARATH	3.3e-13	34.12	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]

BLAST of Cla97C01G012880 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22870.1	4.9e-39	42.05	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G08160.1	3.6e-26	37.35	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35980.1	3.9e-20	32.81	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G05220.1	3.4e-16	27.54	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G53730.1	8.3e-15	24.18	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G012880.1	Cla97C01G012880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 74..175 e-value: 2.9E-14 score: 53.3
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 6..195
None	No IPR available	PANTHER	PTHR31852:SF5	GB\|AAF18257.1	coord: 6..195

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G012880	Cla001045	Watermelon (97103) v1	wmwmbB242
Cla97C01G012880	Csa1G132720	Cucumber (Chinese Long) v2	cuwmbB002
Cla97C01G012880	MELO3C004861	Melon (DHL92) v3.5.1	mewmbB134
Cla97C01G012880	ClCG01G013910	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G012880	CSPI01G13990	Wild cucumber (PI 183967)	cpiwmbB002
Cla97C01G012880	Cucsa.200330	Cucumber (Gy14) v1	cgywmbB374
Cla97C01G012880	CmaCh13G002650	Cucurbita maxima (Rimu)	cmawmbB209
Cla97C01G012880	CmaCh12G008120	Cucurbita maxima (Rimu)	cmawmbB163
Cla97C01G012880	CmoCh12G008210	Cucurbita moschata (Rifu)	cmowmbB149
Cla97C01G012880	CmoCh13G002720	Cucurbita moschata (Rifu)	cmowmbB193
Cla97C01G012880	Lsi03G000600	Bottle gourd (USVL1VR-Ls)	lsiwmbB216
Cla97C01G012880	CsGy1G014000	Cucumber (Gy14) v2	cgybwmbB003
Cla97C01G012880	MELO3C004861.2	Melon (DHL92) v3.6.1	medwmbB127
Cla97C01G012880	Carg23700	Silver-seed gourd	carwmbB0173
Cla97C01G012880	CsaV3_1G014170	Cucumber (Chinese Long) v3	cucwmbB002
Cla97C01G012880	Bhi08G000122	Wax gourd	wgowmbB461

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None