CsGy1G014000 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G014000
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	NDR1/HIN1-like protein 12
Location	Chr1 : 9616681 .. 9617904 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAGCAGCACTACTACTACTACTACTACACAAGGAGAAGCCTCCTCCTCATCCATTATTAGGGCCCCAAAAAGAGGAGCCTATAGGCAACATGGGATAGCAAAACGCACAAGGGTTATAAGAATCATAGGAAGAAGCTTGTTGTGTGCAATAATGCTTTTGGGTATTGCAATCCTCACATGTTGGTTTGTTGTCATCCCCAGAACCCCACAGCTCATGGTGGAAAGTGGCCAAGTCACAGGCTATCATTCAACTATTAGAAAGCTCAATGCCACCATAGTTTTCAATATCAGGAGCTACAACCCTAACAAAAGAGCCTCCATTTACGTGGATTCTATGAAGATGACAGTCAAAAACTATATGAGCGTACCATTTCACTCTGACATCCCCAACTTCACGATGACACCTCGAAACATGACTGTCTTGACCCCCACCATCCTTGTCAACTGCATATATCCGTTTGGGCGTCCGTTGCATGCAGGTTGGATACATATTGAGCTTAGCTTCTCAGCTAAAGTCAGGTATAAACATTCGACTTTTAAGAGAGATGATATATAAAATATACAAAAGTTGTTAGGTTTTGTTGATGTAAAAAAAACTTCAACTTCAAAATTATATATTTTCGATCAAATTCAAAGAATGAAATTTGTCCGATTTACCTTCATTTAAACTAATAGCTATTTTATTTTTTTGTTTTTAGATTTTGAAAATTAATGTTACGTATGCTATTAAAAAAAATAAGTTTTATTTTCCTTTCATTATCTATGCCTCATGGGTTTCTTTCAAAATAAAAGTCAAACTTTGTCTCTATAAAAACTTATGGCTCTGTTTGTATCAGTTACATTTTCAACAGATGGGCATCAAAACCTCGGTTGATGGAGATCTATTGTAATCACTTCTGGTTTAAGATCGATGATTCTATGCCTAATTTTGACAACATCAAATGCCAAGTGGATCTTTGAGAGGTTTGATCTAAGACCATGTTTACATGGAATAAAAAGTAATCCACCAATGGTAATACAAGGAGTGGGCCTTAGTCGATTACTTTACTTTTGTTGTTATTTACTTGCTTTTTGTAATTATATATTGCTTTTTGTAATTATAATGTGATGCAACACCCACCTTCAAATTACAATGGCAAATCTAACTTTTTGTAATTACATTGCCTTTTGTAATTACAATGTGATGCAAGACTCACCTTCAAATTACAATGGCAAATCT

mRNA sequence

ATGAGAAGCAGCACTACTACTACTACTACTACACAAGGAGAAGCCTCCTCCTCATCCATTATTAGGGCCCCAAAAAGAGGAGCCTATAGGCAACATGGGATAGCAAAACGCACAAGGGTTATAAGAATCATAGGAAGAAGCTTGTTGTGTGCAATAATGCTTTTGGGTATTGCAATCCTCACATGTTGGTTTGTTGTCATCCCCAGAACCCCACAGCTCATGGTGGAAAGTGGCCAAGTCACAGGCTATCATTCAACTATTAGAAAGCTCAATGCCACCATAGTTTTCAATATCAGGAGCTACAACCCTAACAAAAGAGCCTCCATTTACGTGGATTCTATGAAGATGACAGTCAAAAACTATATGAGCGTACCATTTCACTCTGACATCCCCAACTTCACGATGACACCTCGAAACATGACTGTCTTGACCCCCACCATCCTTGTCAACTGCATATATCCGTTTGGGCGTCCGTTGCATGCAGGTTGGATACATATTGAGCTTAGCTTCTCAGCTAAAGTCAGTTACATTTTCAACAGATGGGCATCAAAACCTCGGTTGATGGAGATCTATTGTAATCACTTCTGGTTTAAGATCGATGATTCTATGCCTAATTTTGACAACATCAAATGCCAAGTGGATCTTTGAGAGGTTTGATCTAAGACCATGTTTACATGGAATAAAAAGTAATCCACCAATGGTAATACAAGGAGTGGGCCTTAGTCGATTACTTTACTTTTGTTGTTATTTACTTGCTTTTTGTAATTATATATTGCTTTTTGTAATTATAATGTGATGCAACACCCACCTTCAAATTACAATGGCAAATCTAACTTTTTGTAATTACATTGCCTTTTGTAATTACAATGTGATGCAAGACTCACCTTCAAATTACAATGGCAAATCT

Coding sequence (CDS)

ATGAGAAGCAGCACTACTACTACTACTACTACACAAGGAGAAGCCTCCTCCTCATCCATTATTAGGGCCCCAAAAAGAGGAGCCTATAGGCAACATGGGATAGCAAAACGCACAAGGGTTATAAGAATCATAGGAAGAAGCTTGTTGTGTGCAATAATGCTTTTGGGTATTGCAATCCTCACATGTTGGTTTGTTGTCATCCCCAGAACCCCACAGCTCATGGTGGAAAGTGGCCAAGTCACAGGCTATCATTCAACTATTAGAAAGCTCAATGCCACCATAGTTTTCAATATCAGGAGCTACAACCCTAACAAAAGAGCCTCCATTTACGTGGATTCTATGAAGATGACAGTCAAAAACTATATGAGCGTACCATTTCACTCTGACATCCCCAACTTCACGATGACACCTCGAAACATGACTGTCTTGACCCCCACCATCCTTGTCAACTGCATATATCCGTTTGGGCGTCCGTTGCATGCAGGTTGGATACATATTGAGCTTAGCTTCTCAGCTAAAGTCAGTTACATTTTCAACAGATGGGCATCAAAACCTCGGTTGATGGAGATCTATTGTAATCACTTCTGGTTTAAGATCGATGATTCTATGCCTAATTTTGACAACATCAAATGCCAAGTGGATCTTTGA

Protein sequence

MRSSTTTTTTTQGEASSSSIIRAPKRGAYRQHGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVTGYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTPRNMTVLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKIDDSMPNFDNIKCQVDL

Homology

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BLAST of CsGy1G014000 vs. NCBI nr
Match: XP_011654120.1 (PREDICTED: uncharacterized protein LOC105435303 [Cucumis sativus] >KGN64864.1 hypothetical protein Csa_1G132740 [Cucumis sativus])

HSP 1 Score: 401.0 bits (1029), Expect = 2.6e-108
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 22  RAPKRGAYRQHGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVT 81
           RAPKRGAYRQHGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVT
Sbjct: 22  RAPKRGAYRQHGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVT 81

Query: 82  GYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTPRNMT 141
           GYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTPRNMT
Sbjct: 82  GYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTPRNMT 141

Query: 142 VLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKIDD 201
           VLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKIDD
Sbjct: 142 VLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKIDD 201

Query: 202 SMPNFDNIKCQVDL 216
           SMPNFDNIKCQVDL
Sbjct: 202 SMPNFDNIKCQVDL 215

[Close]

BLAST of CsGy1G014000 vs. NCBI nr
Match: XP_008462366.2 (PREDICTED: uncharacterized protein LOC103500736 [Cucumis melo])

HSP 1 Score: 298.5 bits (763), Expect = 1.8e-77
Identity = 144/163 (88.34%), Postives = 151/163 (92.64%), Query Frame = 0


Query: 53  MLLGIAILTCWFVVIPRTPQLMVESGQVTGYHSTIRKLNATIVFNIRSYNPNKRASIYVD 112
           MLLGIAILTCWFVVIPRTP+LMVESG+VTGYHST RKLNATIV NIRSYNPNKRASIY+D
Sbjct: 1   MLLGIAILTCWFVVIPRTPRLMVESGKVTGYHSTNRKLNATIVLNIRSYNPNKRASIYMD 60

Query: 113 SMKMTVKNYMSVPFHSDIPNFTMTPRNMTVLTPTILVNCIYPFGRPLHAGWIHIELSFSA 172
           SMKMTVKN MSVPFHSDIPNFTMTP+N+TVL PTILVN IYPFG PLHAGWIHIELSFSA
Sbjct: 61  SMKMTVKNSMSVPFHSDIPNFTMTPQNVTVLNPTILVNFIYPFGLPLHAGWIHIELSFSA 120

Query: 173 KVSYIFNRWASKPRLMEIYCNHFWFKIDDSMPNFDNIKCQVDL 216
           KVSY+ NRWASKPR MEIYCNHF FKI DSMPNF NI+C VDL
Sbjct: 121 KVSYLLNRWASKPRWMEIYCNHFRFKIGDSMPNFQNIECLVDL 163

[Close]

BLAST of CsGy1G014000 vs. NCBI nr
Match: XP_008462391.1 (PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo])

HSP 1 Score: 285.0 bits (728), Expect = 2.1e-73
Identity = 135/194 (69.59%), Postives = 158/194 (81.44%), Query Frame = 0


Query: 23  APKRGAYRQ-HGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVT 82
           APKR  YRQ H   KRTR+IRIIGRSLLC I+ L +AI+TCW VV PRTP+LMVE+ +VT
Sbjct: 18  APKRSFYRQRHETTKRTRIIRIIGRSLLCVIIFLSVAIITCWLVVFPRTPRLMVETSKVT 77

Query: 83  GYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTPRNMT 142
            + ST RKLNATIVF I+SYNPNK+ASIY+DSMKM VK+YM +PFHS IP FT+ PRN T
Sbjct: 78  AHGSTNRKLNATIVFYIKSYNPNKKASIYMDSMKMIVKDYMGLPFHSAIPTFTLMPRNET 137

Query: 143 VLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKIDD 202
           V   T+ VN IYPFGRP+H+ WIH+EL FSAKVSYI NRW SKPRL+EIYC+H W KI+D
Sbjct: 138 VFNSTVRVNLIYPFGRPVHSDWIHLELRFSAKVSYIVNRWKSKPRLLEIYCDHLWLKIND 197

Query: 203 SMPNFDNIKCQVDL 216
           S PNFD  KC+VD+
Sbjct: 198 STPNFDRTKCKVDI 211

[Close]

BLAST of CsGy1G014000 vs. NCBI nr
Match: KGN64863.1 (hypothetical protein Csa_1G132730 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67
Identity = 124/193 (64.25%), Postives = 152/193 (78.76%), Query Frame = 0


Query: 23  APKRGAYRQHGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVTG 82
           APKR   RQ    KRTR+IRIIGRSLL  I+ L +AI+TCW VV PRTP+LMVE+ +VT 
Sbjct: 18  APKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLVVFPRTPRLMVETSKVTA 77

Query: 83  YHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTPRNMTV 142
           + ST R LNATIVF I+SYNPNK+ASI++DS+KM V +YM +PFHS IP FT+ PRN  V
Sbjct: 78  HGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLPFHSTIPTFTLMPRNEMV 137

Query: 143 LTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKIDDS 202
              T+ VN +YPFGRP+H+ W+H+EL FSA+VSYI NRW SKPRL+EIYC+H W +I+DS
Sbjct: 138 FNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKPRLLEIYCDHLWLRINDS 197

Query: 203 MPNFDNIKCQVDL 216
            PNFD  KC+VDL
Sbjct: 198 TPNFDKTKCRVDL 210

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BLAST of CsGy1G014000 vs. NCBI nr
Match: XP_008462348.1 (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 205.7 bits (522), Expect = 1.6e-49
Identity = 107/184 (58.15%), Postives = 135/184 (73.37%), Query Frame = 0


Query: 32  HGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVTGYHSTIRKLN 91
           HGI KRTR+IR++GRSLL  I L+ + ++ CW VVIP+TP+L+VE+G+V  + STI  LN
Sbjct: 10  HGITKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVVHSSTISMLN 69

Query: 92  ATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTPRNMTVLTPTILVNC 151
           ATI F ++SYNPNKRASI++D M+M V N M V F S IP+FT+TPRN TVL   + VN 
Sbjct: 70  ATIAFTVKSYNPNKRASIHMDYMRMIVDN-MGVRFSSAIPSFTLTPRNQTVLWSAVQVNF 129

Query: 152 IYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKIDDSMPNFDNIKC 211
            YPFG   +   I+ EL FSA+VSY   +W SKPRL+EIYCNH   KI+DS   FDN KC
Sbjct: 130 EYPFG---YTEEINPELQFSAEVSYSVEKWMSKPRLLEIYCNHLLLKINDS-TTFDNTKC 188

Query: 212 QVDL 216
           +VDL
Sbjct: 190 KVDL 188

[Close]

BLAST of CsGy1G014000 vs. TAIR10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 56.2 bits (134), Expect = 2.8e-08
Identity = 52/193 (26.94%), Postives = 87/193 (45.08%), Query Frame = 0


Query: 36  KRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVTGYHST-IRKLNATI 95
           +R  +I  I   +L  I +  +  L  W    P+  +  VE+  V  ++ T    ++AT 
Sbjct: 21  RRPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATF 80

Query: 96  VFNIRSYNPNKRASIYVDSMKMTVK------NYMSV-PFHSDIPNFTMTPRNMTVLTPTI 155
            F I+S+NPN R S+Y  S+++ VK       + +V PFH   P   +   + T++   +
Sbjct: 81  QFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQ--PRMNVKQIDETLIAENV 140

Query: 156 LVNCIYPFGRPLHA----GWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKIDDSM 215
            V+     G+ L +    G I  E+   A+V +    W S  R  +I C+H    +  S 
Sbjct: 141 AVS--KSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSL--SQ 200

[Close]

BLAST of CsGy1G014000 vs. TAIR10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 48.9 bits (115), Expect = 4.5e-06
Identity = 50/171 (29.24%), Postives = 77/171 (45.03%), Query Frame = 0


Query: 23  APKRGAYRQHGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVTG 82
           APK    R HG      ++ +  + ++  I++LG+A L  W +V PR  +  V    +T 
Sbjct: 20  APKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTR 79

Query: 83  YHST----IRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTP- 142
           +  T    I + N  +   +R  NPNKR  +Y D  ++    Y      S I   T+TP 
Sbjct: 80  FDHTSPDNILRYNLALTVPVR--NPNKRIGLYYD--RIEAHAYYEGKRFSTI---TLTPF 139

Query: 143 ----RNMTVLTPTILVNCIYPF----GRPLHA----GWIHIELSFSAKVSY 177
               +N TVLTPT     +  F     R L+A    G  +IE+ F  +V +
Sbjct: 140 YQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRF 183

[Close]

BLAST of CsGy1G014000 vs. TAIR10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 48.5 bits (114), Expect = 5.9e-06
Identity = 35/134 (26.12%), Postives = 63/134 (47.01%), Query Frame = 0


Query: 90  LNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTPRNMTVLTPTILV 149
           +NA   + I+SYNP K  S+   SM+++  ++     H +I  F   P+N T +   ++ 
Sbjct: 88  INAKFSYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVS 147

Query: 150 N--CIYPF-GRPLHA----GWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKI-DD 209
           +   +  F  R L A    G I +E+  +A+VSY    + S+ R ++  C      +   
Sbjct: 148 HNVALSKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSS 207

Query: 210 SMPNFDNIKCQVDL 216
           S+  F  + C+  L
Sbjct: 208 SLDGFQRVLCKTRL 221

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BLAST of CsGy1G014000 vs. Swiss-Prot
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 8.2e-05
Identity = 50/171 (29.24%), Postives = 77/171 (45.03%), Query Frame = 0


Query: 23  APKRGAYRQHGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVTG 82
           APK    R HG      ++ +  + ++  I++LG+A L  W +V PR  +  V    +T 
Sbjct: 20  APKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTR 79

Query: 83  YHST----IRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTP- 142
           +  T    I + N  +   +R  NPNKR  +Y D  ++    Y      S I   T+TP 
Sbjct: 80  FDHTSPDNILRYNLALTVPVR--NPNKRIGLYYD--RIEAHAYYEGKRFSTI---TLTPF 139

Query: 143 ----RNMTVLTPTILVNCIYPF----GRPLHA----GWIHIELSFSAKVSY 177
               +N TVLTPT     +  F     R L+A    G  +IE+ F  +V +
Sbjct: 140 YQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRF 183

[Close]

BLAST of CsGy1G014000 vs. Swiss-Prot
Match: sp|Q8VZ13|Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.1e-04
Identity = 35/134 (26.12%), Postives = 63/134 (47.01%), Query Frame = 0


Query: 90  LNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTPRNMTVLTPTILV 149
           +NA   + I+SYNP K  S+   SM+++  ++     H +I  F   P+N T +   ++ 
Sbjct: 88  INAKFSYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVS 147

Query: 150 N--CIYPF-GRPLHA----GWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKI-DD 209
           +   +  F  R L A    G I +E+  +A+VSY    + S+ R ++  C      +   
Sbjct: 148 HNVALSKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSS 207

Query: 210 SMPNFDNIKCQVDL 216
           S+  F  + C+  L
Sbjct: 208 SLDGFQRVLCKTRL 221

[Close]

BLAST of CsGy1G014000 vs. TrEMBL
Match: tr|A0A0A0LV68|A0A0A0LV68_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132740 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.7e-108
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 22  RAPKRGAYRQHGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVT 81
           RAPKRGAYRQHGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVT
Sbjct: 22  RAPKRGAYRQHGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVT 81

Query: 82  GYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTPRNMT 141
           GYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTPRNMT
Sbjct: 82  GYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTPRNMT 141

Query: 142 VLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKIDD 201
           VLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKIDD
Sbjct: 142 VLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKIDD 201

Query: 202 SMPNFDNIKCQVDL 216
           SMPNFDNIKCQVDL
Sbjct: 202 SMPNFDNIKCQVDL 215

[Close]

BLAST of CsGy1G014000 vs. TrEMBL
Match: tr|A0A1S3CGV1|A0A1S3CGV1_CUCME (uncharacterized protein LOC103500736 OS=Cucumis melo OX=3656 GN=LOC103500736 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.2e-77
Identity = 144/163 (88.34%), Postives = 151/163 (92.64%), Query Frame = 0


Query: 53  MLLGIAILTCWFVVIPRTPQLMVESGQVTGYHSTIRKLNATIVFNIRSYNPNKRASIYVD 112
           MLLGIAILTCWFVVIPRTP+LMVESG+VTGYHST RKLNATIV NIRSYNPNKRASIY+D
Sbjct: 1   MLLGIAILTCWFVVIPRTPRLMVESGKVTGYHSTNRKLNATIVLNIRSYNPNKRASIYMD 60

Query: 113 SMKMTVKNYMSVPFHSDIPNFTMTPRNMTVLTPTILVNCIYPFGRPLHAGWIHIELSFSA 172
           SMKMTVKN MSVPFHSDIPNFTMTP+N+TVL PTILVN IYPFG PLHAGWIHIELSFSA
Sbjct: 61  SMKMTVKNSMSVPFHSDIPNFTMTPQNVTVLNPTILVNFIYPFGLPLHAGWIHIELSFSA 120

Query: 173 KVSYIFNRWASKPRLMEIYCNHFWFKIDDSMPNFDNIKCQVDL 216
           KVSY+ NRWASKPR MEIYCNHF FKI DSMPNF NI+C VDL
Sbjct: 121 KVSYLLNRWASKPRWMEIYCNHFRFKIGDSMPNFQNIECLVDL 163

[Close]

BLAST of CsGy1G014000 vs. TrEMBL
Match: tr|A0A1S3CGU2|A0A1S3CGU2_CUCME (uncharacterized protein At1g08160-like OS=Cucumis melo OX=3656 GN=LOC103500758 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.4e-73
Identity = 135/194 (69.59%), Postives = 158/194 (81.44%), Query Frame = 0


Query: 23  APKRGAYRQ-HGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVT 82
           APKR  YRQ H   KRTR+IRIIGRSLLC I+ L +AI+TCW VV PRTP+LMVE+ +VT
Sbjct: 18  APKRSFYRQRHETTKRTRIIRIIGRSLLCVIIFLSVAIITCWLVVFPRTPRLMVETSKVT 77

Query: 83  GYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTPRNMT 142
            + ST RKLNATIVF I+SYNPNK+ASIY+DSMKM VK+YM +PFHS IP FT+ PRN T
Sbjct: 78  AHGSTNRKLNATIVFYIKSYNPNKKASIYMDSMKMIVKDYMGLPFHSAIPTFTLMPRNET 137

Query: 143 VLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKIDD 202
           V   T+ VN IYPFGRP+H+ WIH+EL FSAKVSYI NRW SKPRL+EIYC+H W KI+D
Sbjct: 138 VFNSTVRVNLIYPFGRPVHSDWIHLELRFSAKVSYIVNRWKSKPRLLEIYCDHLWLKIND 197

Query: 203 SMPNFDNIKCQVDL 216
           S PNFD  KC+VD+
Sbjct: 198 STPNFDRTKCKVDI 211

[Close]

BLAST of CsGy1G014000 vs. TrEMBL
Match: tr|A0A0A0LSU5|A0A0A0LSU5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132730 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 8.6e-68
Identity = 124/193 (64.25%), Postives = 152/193 (78.76%), Query Frame = 0


Query: 23  APKRGAYRQHGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVTG 82
           APKR   RQ    KRTR+IRIIGRSLL  I+ L +AI+TCW VV PRTP+LMVE+ +VT 
Sbjct: 18  APKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLVVFPRTPRLMVETSKVTA 77

Query: 83  YHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTPRNMTV 142
           + ST R LNATIVF I+SYNPNK+ASI++DS+KM V +YM +PFHS IP FT+ PRN  V
Sbjct: 78  HGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLPFHSTIPTFTLMPRNEMV 137

Query: 143 LTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKIDDS 202
              T+ VN +YPFGRP+H+ W+H+EL FSA+VSYI NRW SKPRL+EIYC+H W +I+DS
Sbjct: 138 FNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKPRLLEIYCDHLWLRINDS 197

Query: 203 MPNFDNIKCQVDL 216
            PNFD  KC+VDL
Sbjct: 198 TPNFDKTKCRVDL 210

[Close]

BLAST of CsGy1G014000 vs. TrEMBL
Match: tr|A0A1S3CGS4|A0A1S3CGS4_CUCME (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.1e-49
Identity = 107/184 (58.15%), Postives = 135/184 (73.37%), Query Frame = 0


Query: 32  HGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVIPRTPQLMVESGQVTGYHSTIRKLN 91
           HGI KRTR+IR++GRSLL  I L+ + ++ CW VVIP+TP+L+VE+G+V  + STI  LN
Sbjct: 10  HGITKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVVHSSTISMLN 69

Query: 92  ATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFHSDIPNFTMTPRNMTVLTPTILVNC 151
           ATI F ++SYNPNKRASI++D M+M V N M V F S IP+FT+TPRN TVL   + VN 
Sbjct: 70  ATIAFTVKSYNPNKRASIHMDYMRMIVDN-MGVRFSSAIPSFTLTPRNQTVLWSAVQVNF 129

Query: 152 IYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRLMEIYCNHFWFKIDDSMPNFDNIKC 211
            YPFG   +   I+ EL FSA+VSY   +W SKPRL+EIYCNH   KI+DS   FDN KC
Sbjct: 130 EYPFG---YTEEINPELQFSAEVSYSVEKWMSKPRLLEIYCNHLLLKINDS-TTFDNTKC 188

Query: 212 QVDL 216
           +VDL
Sbjct: 190 KVDL 188

The following BLAST results are available for this feature:

BLAST of CsGy1G014000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654120.1	2.6e-108	100.00	PREDICTED: uncharacterized protein LOC105435303 [Cucumis sativus] >KGN64864.1 hy...	[more]
XP_008462366.2	1.8e-77	88.34	PREDICTED: uncharacterized protein LOC103500736 [Cucumis melo]	[more]
XP_008462391.1	2.1e-73	69.59	PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo]	[more]
KGN64863.1	1.3e-67	64.25	hypothetical protein Csa_1G132730 [Cucumis sativus]	[more]
XP_008462348.1	1.6e-49	58.15	PREDICTED: protein YLS9-like [Cucumis melo]	[more]

BLAST of CsGy1G014000 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22870.1	2.8e-08	26.94	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35980.1	4.5e-06	29.24	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G08160.1	5.9e-06	26.12	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

BLAST of CsGy1G014000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SJ52\|NHL10_ARATH	8.2e-05	29.24	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
sp\|Q8VZ13\|Y1816_ARATH	1.1e-04	26.12	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]

BLAST of CsGy1G014000 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LV68\|A0A0A0LV68_CUCSA	1.7e-108	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132740 PE=4 SV=1	[more]
tr\|A0A1S3CGV1\|A0A1S3CGV1_CUCME	1.2e-77	88.34	uncharacterized protein LOC103500736 OS=Cucumis melo OX=3656 GN=LOC103500736 PE=...	[more]
tr\|A0A1S3CGU2\|A0A1S3CGU2_CUCME	1.4e-73	69.59	uncharacterized protein At1g08160-like OS=Cucumis melo OX=3656 GN=LOC103500758 P...	[more]
tr\|A0A0A0LSU5\|A0A0A0LSU5_CUCSA	8.6e-68	64.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132730 PE=4 SV=1	[more]
tr\|A0A1S3CGS4\|A0A1S3CGS4_CUCME	1.1e-49	58.15	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G014000.1	CsGy1G014000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852:SF5	GB\|AAF18257.1	coord: 36..215
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 36..215

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G014000	Cla97C01G012880	Watermelon (97103) v2	cgybwmbB003

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G014000	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G014000	Watermelon (97103) v2	cgybwmbB026
CsGy1G014000	Wax gourd	cgybwgoB046
CsGy1G014000	Cucurbita maxima (Rimu)	cgybcmaB058
CsGy1G014000	Cucurbita maxima (Rimu)	cgybcmaB061
CsGy1G014000	Cucurbita maxima (Rimu)	cgybcmaB123
CsGy1G014000	Cucurbita moschata (Rifu)	cgybcmoB054
CsGy1G014000	Cucurbita moschata (Rifu)	cgybcmoB057
CsGy1G014000	Cucurbita moschata (Rifu)	cgybcmoB113
CsGy1G014000	Cucurbita pepo (Zucchini)	cgybcpeB082
CsGy1G014000	Cucurbita pepo (Zucchini)	cgybcpeB142
CsGy1G014000	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G014000	Bottle gourd (USVL1VR-Ls)	cgyblsiB041
CsGy1G014000	Melon (DHL92) v3.5.1	cgybmeB010
CsGy1G014000	Melon (DHL92) v3.6.1	cgybmedB009
CsGy1G014000	Watermelon (Charleston Gray)	cgybwcgB014
CsGy1G014000	Watermelon (Charleston Gray)	cgybwcgB027
CsGy1G014000	Watermelon (97103) v1	cgybwmB047
CsGy1G014000	Watermelon (97103) v1	cgybwmB067
CsGy1G014000	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G014000	Silver-seed gourd	carcgybB0180