MELO3C004861.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATAATGAGAGAAAAGAGAATACAAGGCAAGTTTATTAGTTAAATCATTCCAACATCCAAACTTGCAAAGCCTCTCTTATATATTAATCCATTCTCATTTCCTTCTTTTTGTAGTACTCTTCTTAAAGCAAAGCCTCTTCAATCAAAGTTGGCTTCTTTTCCTTAGCAGAGAACTATCCATCATTGAGCATGGCAGGTCCTCCGCAGCCACCGTCGCGAGCTGGCCCCTCAAGGATATTGCGTTTTGTCATAATTTTCTTAGTGGCATTGATCATACTCGTTGGCCTTGCCGTGCTCATTATCTGGCTGACTATTAGGCCGAAACGATTAAGCTACACGGTGGAAAGCGCAGAGGTCCACAACTTCGACATGACCAACACCCAACTCAATGCATCCTTTAGTTTTGGGGTAAGAGCATATAATCCCAATAAACGAGTCTCGGTTTACTATGATTCCATCACCGCCACGGTTGGGTTCGGTGATCAAGACTTGGCGTTTGGCGTGCTCAGTCCTTTCTACCAACCTCACAAAGACGAGCAATGGTTGAACATCCACCTCAACGCTCAAAACTTTCTATTGCACGATTCTGTGTCGAAGGATTTGGCACTTGAAAGGTCAGCAGGAGAGATGGATTTGGATCTTTGGATCAAGGCAAGAATTAGGTTTAAGGTTGGGGTATGGAAGTCGGCGCATAGGACGCTTCGAATCCGGTGTTCGCCGGTGATTGTCTACTTGTCTAAATCCAAGACTTTCAAGAAGACTACTTGCTTTACAGAAGTCTAAGGTTATGGAATTTGGTTTTTTTGCTTTTATCAAAAGTGTTTTTCTTTTTTCCTTCTTAATTACTTTCTGAAAATTGTATTGTTGGTGTGGTTGTTGGGTTAATCTTTTAAGTGTTGAATTTGTGAGCTGTGATTGTTGCTTGGTTTTCATTTATGTATATGCTCTTTTTGATCATTTTTTTTGCTCAGTACAAATGTCAGTCCATTCTTTAACAAATAAGTGCAACCATTTGTAATTTGATTTGATTTAAATAATTGAAATTTTTTTATGTATATGTTTATTGTTTTCTATATTGGA AAATAATGAGAGAAAAGAGAATACAAGGCAAGTTTATTAGTTAAATCATTCCAACATCCAAACTTGCAAAGCCTCTCTTATATATTAATCCATTCTCATTTCCTTCTTTTTGTAGTACTCTTCTTAAAGCAAAGCCTCTTCAATCAAAGTTGGCTTCTTTTCCTTAGCAGAGAACTATCCATCATTGAGCATGGCAGGTCCTCCGCAGCCACCGTCGCGAGCTGGCCCCTCAAGGATATTGCGTTTTGTCATAATTTTCTTAGTGGCATTGATCATACTCGTTGGCCTTGCCGTGCTCATTATCTGGCTGACTATTAGGCCGAAACGATTAAGCTACACGGTGGAAAGCGCAGAGGTCCACAACTTCGACATGACCAACACCCAACTCAATGCATCCTTTAGTTTTGGGGTAAGAGCATATAATCCCAATAAACGAGTCTCGGTTTACTATGATTCCATCACCGCCACGGTTGGGTTCGGTGATCAAGACTTGGCGTTTGGCGTGCTCAGTCCTTTCTACCAACCTCACAAAGACGAGCAATGGTTGAACATCCACCTCAACGCTCAAAACTTTCTATTGCACGATTCTGTGTCGAAGGATTTGGCACTTGAAAGGTCAGCAGGAGAGATGGATTTGGATCTTTGGATCAAGGCAAGAATTAGGTTTAAGGTTGGGGTATGGAAGTCGGCGCATAGGACGCTTCGAATCCGGTGTTCGCCGGTGATTGTCTACTTGTCTAAATCCAAGACTTTCAAGAAGACTACTTGCTTTACAGAAGTCTAAGGTTATGGAATTTGGTTTTTTTGCTTTTATCAAAAGTGTTTTTCTTTTTTCCTTCTTAATTACTTTCTGAAAATTGTATTGTTGGTGTGGTTGTTGGGTTAATCTTTTAAGTGTTGAATTTGTGAGCTGTGATTGTTGCTTGGTTTTCATTTATGTATATGCTCTTTTTGATCATTTTTTTTGCTCAGTACAAATGTCAGTCCATTCTTTAACAAATAAGTGCAACCATTTGTAATTTGATTTGATTTAAATAATTGAAATTTTTTTATGTATATGTTTATTGTTTTCTATATTGGA ATGGCAGGTCCTCCGCAGCCACCGTCGCGAGCTGGCCCCTCAAGGATATTGCGTTTTGTCATAATTTTCTTAGTGGCATTGATCATACTCGTTGGCCTTGCCGTGCTCATTATCTGGCTGACTATTAGGCCGAAACGATTAAGCTACACGGTGGAAAGCGCAGAGGTCCACAACTTCGACATGACCAACACCCAACTCAATGCATCCTTTAGTTTTGGGGTAAGAGCATATAATCCCAATAAACGAGTCTCGGTTTACTATGATTCCATCACCGCCACGGTTGGGTTCGGTGATCAAGACTTGGCGTTTGGCGTGCTCAGTCCTTTCTACCAACCTCACAAAGACGAGCAATGGTTGAACATCCACCTCAACGCTCAAAACTTTCTATTGCACGATTCTGTGTCGAAGGATTTGGCACTTGAAAGGTCAGCAGGAGAGATGGATTTGGATCTTTGGATCAAGGCAAGAATTAGGTTTAAGGTTGGGGTATGGAAGTCGGCGCATAGGACGCTTCGAATCCGGTGTTCGCCGGTGATTGTCTACTTGTCTAAATCCAAGACTTTCAAGAAGACTACTTGCTTTACAGAAGTCTAA MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFDMTNTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWLNIHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIVYLSKSKTFKKTTCFTEV
BLAST of MELO3C004861.2 vs. NCBI nr
Match: XP_008464346.1 (PREDICTED: uncharacterized protein At1g08160 [Cucumis melo]) HSP 1 Score: 390.6 bits (1002), Expect = 3.2e-105 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of MELO3C004861.2 vs. NCBI nr
Match: XP_011654115.1 (PREDICTED: uncharacterized protein At1g08160 [Cucumis sativus] >KGN64862.1 hypothetical protein Csa_1G132720 [Cucumis sativus]) HSP 1 Score: 378.6 bits (971), Expect = 1.3e-101 Identity = 190/197 (96.45%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of MELO3C004861.2 vs. NCBI nr
Match: XP_022937555.1 (uncharacterized protein At1g08160 [Cucurbita moschata] >XP_023537506.1 uncharacterized protein At1g08160 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 297.7 bits (761), Expect = 2.8e-77 Identity = 147/197 (74.62%), Postives = 161/197 (81.73%), Query Frame = 0
BLAST of MELO3C004861.2 vs. NCBI nr
Match: XP_022969533.1 (uncharacterized protein At1g08160 [Cucurbita maxima]) HSP 1 Score: 290.4 bits (742), Expect = 4.5e-75 Identity = 143/197 (72.59%), Postives = 158/197 (80.20%), Query Frame = 0
BLAST of MELO3C004861.2 vs. NCBI nr
Match: XP_022152939.1 (uncharacterized protein At1g08160 [Momordica charantia]) HSP 1 Score: 280.0 bits (715), Expect = 6.1e-72 Identity = 141/197 (71.57%), Postives = 163/197 (82.74%), Query Frame = 0
BLAST of MELO3C004861.2 vs. TAIR10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 153.7 bits (387), Expect = 1.2e-37 Identity = 79/195 (40.51%), Postives = 128/195 (65.64%), Query Frame = 0
BLAST of MELO3C004861.2 vs. TAIR10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 113.2 bits (282), Expect = 1.8e-25 Identity = 61/166 (36.75%), Postives = 101/166 (60.84%), Query Frame = 0
BLAST of MELO3C004861.2 vs. TAIR10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 89.4 bits (220), Expect = 2.8e-18 Identity = 59/192 (30.73%), Postives = 100/192 (52.08%), Query Frame = 0
BLAST of MELO3C004861.2 vs. TAIR10
Match: AT5G53730.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 83.2 bits (204), Expect = 2.0e-16 Identity = 39/153 (25.49%), Postives = 80/153 (52.29%), Query Frame = 0
BLAST of MELO3C004861.2 vs. TAIR10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 77.8 bits (190), Expect = 8.3e-15 Identity = 44/167 (26.35%), Postives = 85/167 (50.90%), Query Frame = 0
BLAST of MELO3C004861.2 vs. Swiss-Prot
Match: sp|Q8VZ13|Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 3.2e-24 Identity = 61/166 (36.75%), Postives = 101/166 (60.84%), Query Frame = 0
BLAST of MELO3C004861.2 vs. Swiss-Prot
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 5.0e-17 Identity = 59/192 (30.73%), Postives = 100/192 (52.08%), Query Frame = 0
BLAST of MELO3C004861.2 vs. Swiss-Prot
Match: sp|Q9FI03|NHL26_ARATH (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 3.6e-15 Identity = 39/153 (25.49%), Postives = 80/153 (52.29%), Query Frame = 0
BLAST of MELO3C004861.2 vs. Swiss-Prot
Match: sp|Q9FNH6|NHL3_ARATH (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.0e-13 Identity = 57/170 (33.53%), Postives = 86/170 (50.59%), Query Frame = 0
BLAST of MELO3C004861.2 vs. Swiss-Prot
Match: sp|Q9SRN1|NHL2_ARATH (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 3.7e-12 Identity = 44/151 (29.14%), Postives = 70/151 (46.36%), Query Frame = 0
BLAST of MELO3C004861.2 vs. TrEMBL
Match: tr|A0A1S3CLP6|A0A1S3CLP6_CUCME (uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103502251 PE=4 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 2.1e-105 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of MELO3C004861.2 vs. TrEMBL
Match: tr|A0A0A0LVK3|A0A0A0LVK3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132720 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 8.3e-102 Identity = 190/197 (96.45%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of MELO3C004861.2 vs. TrEMBL
Match: tr|A0A2P5DD23|A0A2P5DD23_9ROSA (Late embryogenesis abundant protein OS=Trema orientalis OX=63057 GN=TorRG33x02_254850 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 2.2e-54 Identity = 111/191 (58.12%), Postives = 145/191 (75.92%), Query Frame = 0
BLAST of MELO3C004861.2 vs. TrEMBL
Match: tr|W9S3V4|W9S3V4_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011767 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 2.9e-54 Identity = 106/195 (54.36%), Postives = 147/195 (75.38%), Query Frame = 0
BLAST of MELO3C004861.2 vs. TrEMBL
Match: tr|K7M1R4|K7M1R4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100801370 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.2e-52 Identity = 110/203 (54.19%), Postives = 151/203 (74.38%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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