Cla97C01G006840 (gene) Watermelon (97103) v2

NameCla97C01G006840
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionAt1g67920
LocationCla97Chr01 : 6911185 .. 6911424 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAACGCGACGGCGACGGCGACGGTGGCCAGCGATTCCGATTCTGACGTTTCTCAGCTTCCCATTCACAGCCAAGTTGAGAAGATCAAGAAGGAGATTGAGAAGATCAAGCATCCTTCCCTTCAGCAATCCGAGATGAACACTCACCTTCTTCTTCGCGGTATCTCGATTTCGAAGCCGCGATCTCGCTCTCCCCTAGGGCTCGCCGCCGAGAGGCCTATTTCCGTCGGGAATTAA

mRNA sequence

ATGGAGAACGCGACGGCGACGGCGACGGTGGCCAGCGATTCCGATTCTGACGTTTCTCAGCTTCCCATTCACAGCCAAGTTGAGAAGATCAAGAAGGAGATTGAGAAGATCAAGCATCCTTCCCTTCAGCAATCCGAGATGAACACTCACCTTCTTCTTCGCGGTATCTCGATTTCGAAGCCGCGATCTCGCTCTCCCCTAGGGCTCGCCGCCGAGAGGCCTATTTCCGTCGGGAATTAA

Coding sequence (CDS)

ATGGAGAACGCGACGGCGACGGCGACGGTGGCCAGCGATTCCGATTCTGACGTTTCTCAGCTTCCCATTCACAGCCAAGTTGAGAAGATCAAGAAGGAGATTGAGAAGATCAAGCATCCTTCCCTTCAGCAATCCGAGATGAACACTCACCTTCTTCTTCGCGGTATCTCGATTTCGAAGCCGCGATCTCGCTCTCCCCTAGGGCTCGCCGCCGAGAGGCCTATTTCCGTCGGGAATTAA

Protein sequence

MENATATATVASDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN
BLAST of Cla97C01G006840 vs. NCBI nr
Match: XP_016903705.1 (PREDICTED: uncharacterized protein LOC103504534 [Cucumis melo])

HSP 1 Score: 111.3 bits (277), Expect = 1.5e-21
Identity = 56/62 (90.32%), Postives = 60/62 (96.77%), Query Frame = 0

Query: 18 VSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISV 77
          VSQ+PIHSQVEKIKKEIEKIKHPSLQQS+MNTHLLLRGISISKPRSRSPLGL ++ PISV
Sbjct: 14 VSQVPIHSQVEKIKKEIEKIKHPSLQQSDMNTHLLLRGISISKPRSRSPLGLPSDTPISV 73

Query: 78 GN 80
          GN
Sbjct: 74 GN 75

BLAST of Cla97C01G006840 vs. NCBI nr
Match: XP_011655448.1 (PREDICTED: uncharacterized protein LOC105435535 [Cucumis sativus] >KGN51465.1 hypothetical protein Csa_5G561250 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 2.2e-20
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0

Query: 18 VSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISV 77
          VS LPIHSQVEKIKKEIEKIKHPSLQQS+MNTHLLLRGISISKPRSRSPLGL ++  ISV
Sbjct: 14 VSHLPIHSQVEKIKKEIEKIKHPSLQQSDMNTHLLLRGISISKPRSRSPLGLPSDTSISV 73

Query: 78 GN 80
          GN
Sbjct: 74 GN 75

BLAST of Cla97C01G006840 vs. NCBI nr
Match: XP_022146403.1 (uncharacterized protein LOC111015628 [Momordica charantia])

HSP 1 Score: 104.4 bits (259), Expect = 1.8e-19
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 0

Query: 19 SQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVG 78
          +Q+P+H QV KIK+EIEKIKHPSLQQSEM THLLLRGISISK RSRSPLGLAAERPISVG
Sbjct: 12 AQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLAAERPISVG 71

Query: 79 N 80
          N
Sbjct: 72 N 72

BLAST of Cla97C01G006840 vs. NCBI nr
Match: XP_023523054.1 (uncharacterized protein LOC111787191 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 100.5 bits (249), Expect = 2.7e-18
Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 0

Query: 19 SQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVG 78
          SQ P+H QV KIKKEIEKIKHPSLQQSEM+THLLLR +SISKPR RSPLGLAAER ISVG
Sbjct: 14 SQAPVHIQVVKIKKEIEKIKHPSLQQSEMSTHLLLRDMSISKPRPRSPLGLAAERSISVG 73

Query: 79 N 80
          N
Sbjct: 74 N 74

BLAST of Cla97C01G006840 vs. NCBI nr
Match: XP_022921904.1 (uncharacterized protein LOC111430025 isoform X1 [Cucurbita moschata])

HSP 1 Score: 99.4 bits (246), Expect = 5.9e-18
Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 0

Query: 19 SQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVG 78
          SQ P+H QV KIK+EIEKIKHPSLQQSEM+THLLLR +SISKPR RSPLGLAAER ISVG
Sbjct: 14 SQAPVHIQVVKIKREIEKIKHPSLQQSEMSTHLLLRDMSISKPRPRSPLGLAAERSISVG 73

Query: 79 N 80
          N
Sbjct: 74 N 74

BLAST of Cla97C01G006840 vs. TrEMBL
Match: tr|A0A1S4E6T1|A0A1S4E6T1_CUCME (uncharacterized protein LOC103504534 OS=Cucumis melo OX=3656 GN=LOC103504534 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-21
Identity = 56/62 (90.32%), Postives = 60/62 (96.77%), Query Frame = 0

Query: 18 VSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISV 77
          VSQ+PIHSQVEKIKKEIEKIKHPSLQQS+MNTHLLLRGISISKPRSRSPLGL ++ PISV
Sbjct: 14 VSQVPIHSQVEKIKKEIEKIKHPSLQQSDMNTHLLLRGISISKPRSRSPLGLPSDTPISV 73

Query: 78 GN 80
          GN
Sbjct: 74 GN 75

BLAST of Cla97C01G006840 vs. TrEMBL
Match: tr|A0A0A0KPB9|A0A0A0KPB9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G561250 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-20
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0

Query: 18 VSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISV 77
          VS LPIHSQVEKIKKEIEKIKHPSLQQS+MNTHLLLRGISISKPRSRSPLGL ++  ISV
Sbjct: 14 VSHLPIHSQVEKIKKEIEKIKHPSLQQSDMNTHLLLRGISISKPRSRSPLGLPSDTSISV 73

Query: 78 GN 80
          GN
Sbjct: 74 GN 75

BLAST of Cla97C01G006840 vs. TrEMBL
Match: tr|A0A1R3GRJ3|A0A1R3GRJ3_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_23951 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.7e-09
Identity = 40/59 (67.80%), Postives = 48/59 (81.36%), Query Frame = 0

Query: 21 LPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN 80
          +PIHSQV K+K+E EKIKHPSLQQ++M    +LR   I++ RSRSPLGL AERPISVGN
Sbjct: 32 VPIHSQVMKVKQEFEKIKHPSLQQADMRR--VLR--EINRQRSRSPLGL-AERPISVGN 85

BLAST of Cla97C01G006840 vs. TrEMBL
Match: tr|A0A1R3JGN0|A0A1R3JGN0_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16580 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.7e-09
Identity = 40/59 (67.80%), Postives = 48/59 (81.36%), Query Frame = 0

Query: 21 LPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN 80
          +PIHSQV K+K+E EKIKHPSLQQ++M    +LR   I++ RSRSPLGL AERPISVGN
Sbjct: 31 VPIHSQVMKVKQEFEKIKHPSLQQADMRR--VLR--EINRQRSRSPLGL-AERPISVGN 84

BLAST of Cla97C01G006840 vs. TrEMBL
Match: tr|A0A2P5WS48|A0A2P5WS48_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA26760 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-08
Identity = 41/59 (69.49%), Postives = 47/59 (79.66%), Query Frame = 0

Query: 21  LPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN 80
           +PIHSQV KIK+E EKIKHPSLQQ +M    +LR   I++ RSRSPLGL AERPISVGN
Sbjct: 48  VPIHSQVMKIKQEFEKIKHPSLQQPDMRR--VLR--EITRQRSRSPLGL-AERPISVGN 101

BLAST of Cla97C01G006840 vs. TAIR10
Match: AT1G67920.1 (unknown protein)

HSP 1 Score: 57.8 bits (138), Expect = 3.6e-09
Identity = 38/57 (66.67%), Postives = 41/57 (71.93%), Query Frame = 0

Query: 23 IHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN 80
          IHSQVEKIKKE EKI+ PSLQQ EM    +L  I   + RSRSPLGL  ER ISVGN
Sbjct: 15 IHSQVEKIKKEFEKIRQPSLQQPEMRR--VLSEIK-RRQRSRSPLGL-GERSISVGN 67

BLAST of Cla97C01G006840 vs. TAIR10
Match: AT1G24600.1 (unknown protein)

HSP 1 Score: 53.9 bits (128), Expect = 5.2e-08
Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = 0

Query: 23 IHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLA-AERPISVGN 80
          IHSQV KIK+E EKI+HPSL+Q EM   L+ R I +   RSRSPLGL   ER I VGN
Sbjct: 18 IHSQVVKIKREFEKIQHPSLKQPEM--PLVFREI-MGPRRSRSPLGLGERERSIPVGN 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016903705.11.5e-2190.32PREDICTED: uncharacterized protein LOC103504534 [Cucumis melo][more]
XP_011655448.12.2e-2088.71PREDICTED: uncharacterized protein LOC105435535 [Cucumis sativus] >KGN51465.1 hy... [more]
XP_022146403.11.8e-1986.89uncharacterized protein LOC111015628 [Momordica charantia][more]
XP_023523054.12.7e-1885.25uncharacterized protein LOC111787191 [Cucurbita pepo subsp. pepo][more]
XP_022921904.15.9e-1883.61uncharacterized protein LOC111430025 isoform X1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
tr|A0A1S4E6T1|A0A1S4E6T1_CUCME1.0e-2190.32uncharacterized protein LOC103504534 OS=Cucumis melo OX=3656 GN=LOC103504534 PE=... [more]
tr|A0A0A0KPB9|A0A0A0KPB9_CUCSA1.4e-2088.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G561250 PE=4 SV=1[more]
tr|A0A1R3GRJ3|A0A1R3GRJ3_COCAP9.7e-0967.80Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_23951 PE=4 ... [more]
tr|A0A1R3JGN0|A0A1R3JGN0_9ROSI9.7e-0967.80Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16580 PE=4 SV=1[more]
tr|A0A2P5WS48|A0A2P5WS48_GOSBA1.3e-0869.49Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA26760 PE=4 SV... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT1G67920.13.6e-0966.67unknown protein[more]
AT1G24600.15.2e-0862.07unknown protein[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G006840.1Cla97C01G006840.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..79
NoneNo IPR availablePANTHERPTHR34780:SF2SUBFAMILY NOT NAMEDcoord: 2..79
NoneNo IPR availablePANTHERPTHR34780FAMILY NOT NAMEDcoord: 2..79

The following gene(s) are paralogous to this gene:

None