Cla97C01G001380 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G001380
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	50S ribosomal protein L11, chloroplastic
Location	Cla97Chr01 : 1185873 .. 1189585 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCTTCCCTCTCCACCTATCATCAACATCATCTTCTTTCTCCTTCATTTTCTTCCAAAATTACTGCTAATTCCAAGCATCTTTCCTCTCCATTTCTCACTTCACCCTCGTCTGGGTTGTCTTCAAATTTCAATTTCTCGCTTCGGTTCCTCAGTAATGGCCAATCTTCCTCCCTCATCTCTCCCACTCCAAGGCGTCTCAGTGTTGTCTCAATGGCCCCTCCTAAAGCCAAGCCCGGTGGAAAATCCAAGAAGGGTAAATTTCTTTTTCTGATAAACCCTTAATTTCCTTCAACCATCATCCTTAATTTGGCTGCGATTTCATCTAATTTGCTTTTCGGGTTTACAGTAATTGGGATGATAAAGCTTGCTCTGGAGGCTGGAAAGGCTACCCCAGCTCCTCCTGTAGGCCCTGCTCTTGGTTCGAAGGGTGTTAATATTATGGCCTTCTGTAAGGATTACAATGCCAAGACAGCTGACAAGGCCGGCTACGTTATTCCAGTCGAAATTACTGTTTACGATGTGGGTTTGTCTTTCTTCTCTGTGAATGCTCTGCCATGCTTTTGTTCGGCAATGTCTTAATTGTTTGATTTGGAACAGGATAAAAGTTTTACTTTCGTGCTGAAGACTCCACCTGCTTCAGTTCTTCTTCTCAAGGCTGCCGGTATTTCCCTTTAAGTGTTTGATGCTCTTTTTGCTGTTCCACTCTCACATTTTGTGTGTTTATGTGCGGATATGTTTTATCCAATTTTTCGATTCCCTTGTTTGTGCCAATTGCAATTGCTATGGCTTTTTGCAAACCCATTTGGCATCCCCTGTGTAACCTTTTTGTTCATTTTTATTTAATGAAAATTTGGCTTTTCTTCTTGGAAGCTGTTTATTTCACTTTTGTTTACAAGGAGGTGGGGAGCAGAGGAGAATTAATGAAGTTACTTACTAAATTAATTGCTAATCACATTCATAATTGGAACTCCTTCACTGAGATGTTGGCTATAGAAGGATCCATATCTGGTTTATATTAAAATTTGATATTTGTTCTTTACAATTTGCCACTGATATCCTTTTTTTTTTAATAAAAAAACTTTATTTTTATAATAATAATAATTATTATTATTTCCCCCCGTTTGTGAGTTGTTTCTAAAACAGTAACTTATTTAGATTGGTGAAATGTGGGAGAAGGCTTCAGGGGTTAAAGTGGATTTAGATCAAATTGTGGTGGCAGAGATCTGTCTTTAATAAGCATGAATTTCAGGTCTGAGGAGCGAAGTGGCCCTTGAACTACCTTGATATTAGTTATAATTCTAGAACTATAATGTTTTGCATCCCTTAGTTGAAGAAATTAATGAGAAGATTAGGAAATGGAAGAAGTCCTACATCTTCATGAGTCAGCAACCTCACCCTAGGCCAGGCTAGCTGGGCTGTATTCTCCAATTCTCCCAAATATTTATTGGTTTTAGTCTTCAAGTTCCCTAAGGTTGCAAGGAAGGTGGACCAAATCCAAAGAGATCTCTTTTGGAAGGTCTAAAGCAAGAAGTTGTTGGCATCCAAACACAAAAAACATACAAAACTAATATATTGCAATGTAAAAAATAAACTACAATAGAAATATGTAATTTGAGGTACTTGTACTCTCTTTCTTCAGATCTCTCTCAAACCTAATTCACTCACCAAATGCTCAACTCCTTTCTTCCTCACTCGCTCTATTATAACTAAACTCCAAATGTAACCAGCCTCTCTATCTCATTACTAATATACCCTTAATATTCCTAATTGCATTCCTAACAAAACTTCACTAGTATGTTTACCTTATTCATTGGAACATAACTTTGAGATTCAATGCCTATGGAGGAATGGGCACTTGCAATTGCAAAAGTATCAGGAGGAATGTCGTTCTGTTTAAGTGTGGATTAAACATGTTTTCCAGATCAGATAGAGCAGCTTTGTGGCATATGGTGATTGCTGCTAAATATGGTGTAGGCTCCTTAGCTTCTGATTCATGACTAACAACCAAACTCAATCATGCAAGAGAAGTCCCTAATTCTTCATAACCAAGCCAATAATCTAAATCCCTAGGAAAACTAGGATGGTGGTTGCCAGTTGGAATGTTAATAAGGTTAGCTTTTGGAAGGACTCTGGAAGTAGGTATCTTTTAGGCTGCAGTGTGGTGAAGATAGTGGCACCAGAAAATGTTTGTTGCATATTTTGTGCAAGTCTCTCTTTTGGTATGTCGCTTTAGAAGCTACTGCCTCTATGCATTTTGTTACCCAAAAAATTGGAAAGGATGTCCTACCTCTTAAATAGACCAAAGTTTTCTTCTGGGGTGGTATTTGGAGGATATTATCCACCTCCTCTTCATCAAATTACAGCTTACTACCCAACTCTCGCAGTGGCCATTGGTTGCTTTTGGACATGTTTTTGGGCTTCCTTCTAATTTCAGGCCTTCATGTATTTTTAGATGGATTATCTTTACTCAAAATCAAATAGGGATCTGTTTTGTGGCTTGATGCTATTATGATCATTTTTTGAGAATCTTGGTTGGAAAGGGATTGAAGAGTATTTCACAACAGGAAGAAAGGGTAGCGCATGGGGTTTGGGAAATCATCGTTCTTCTTACTTCTTAATGAGTGTAAGTTTTAAGGAATTCTATGACTCTTCCTCTTCCATTATTGCCCCCAATTTGATATCTTTTTGTAACTTCTTGGCATAGGGGTTTCCTTTCCTGTATATTTCATTCTTTTGAAGAAACTGTTTCTTGCCAAAAAATAAAATAAATACAGTCATTGAGCCATTTGGTACTGAGATTGAATCACTATCAGCATGCAGCCAGAGGTCCGTGTAATCAATTTGATACTTGTGAAAATCTCGTGTATTATCCAAGACTTGAGAAAAGCAAAGAGTACATCTTTTGATTAGAGTCATCCGAGACAAACTTTCATTGAAGAAAGGAAGAATACAGGAAAAAGAAAAAGGTTTCCTGTATTCCCTTCCTTTCTTCAATGAAAGAACGCTCTTTGAATGAGTATTAGGAAAAACTCCTCGAATCTATGAGGATACAAAAGTAATTACAATGAAACAATAGCCTTTTGAGAAAGTCCCACAACACAATCTCACCAAAATGATCCTCCTTCCCAAAAATCTCAAAGCCCTTTATTTATGACCACGCCACCCTTATCTAATTACTGCTATGCCCATGCTAATATTCACAATACTGATTAGTACTCTCACAGTATGATCCTCTAATTCAAGTTAGAAGGAGCCAAGTCATTCGTAGGGATTCGTATTTTGTAATAAAAAGCTAATGAGTAAAATGGTTTTTATTTTTGTATTTTGTGATAAAAAGCTAATCAGTTAGTGGCATCTATAGTAGACAATCTACAGCACACCTAGGAGATTCACATCGATTTGCATGCCATTTTGATAGTTTACGTATGCTGAGAAGCTGTTTGCGCACACTGCCTGCTGTATTGCATTTTATTAACCTGTATGAGCTGGTTCATGCAGGAGTTGAAAAAGGATCAAAAGATCCTAAGGGAGAAAAAGTGGGAAAGATAACCATTGAACAGTTGCGCGTGATTGCTGCAGAAAAGTTACCAGATTTGAATTGCACAACCATTGAATCTGCAATGAGAATCATAGCAGGTACAGCAGCCAATATGGGAATTGAGGTTGACCCTCCTGTCCTTGAACCTAAAGAGAAGGAACTTGTGTAG

mRNA sequence

ATGGCGTCTTCCCTCTCCACCTATCATCAACATCATCTTCTTTCTCCTTCATTTTCTTCCAAAATTACTGCTAATTCCAAGCATCTTTCCTCTCCATTTCTCACTTCACCCTCGTCTGGGTTGTCTTCAAATTTCAATTTCTCGCTTCGGTTCCTCAGTAATGGCCAATCTTCCTCCCTCATCTCTCCCACTCCAAGGCGTCTCAGTGTTGTCTCAATGGCCCCTCCTAAAGCCAAGCCCGGTGGAAAATCCAAGAAGGTAATTGGGATGATAAAGCTTGCTCTGGAGGCTGGAAAGGCTACCCCAGCTCCTCCTGTAGGCCCTGCTCTTGGTTCGAAGGGTGTTAATATTATGGCCTTCTGTAAGGATTACAATGCCAAGACAGCTGACAAGGCCGGCTACGTTATTCCAGTCGAAATTACTGTTTACGATGATAAAAGTTTTACTTTCGTGCTGAAGACTCCACCTGCTTCAGTTCTTCTTCTCAAGGCTGCCGGAGTTGAAAAAGGATCAAAAGATCCTAAGGGAGAAAAAGTGGGAAAGATAACCATTGAACAGTTGCGCGTGATTGCTGCAGAAAAGTTACCAGATTTGAATTGCACAACCATTGAATCTGCAATGAGAATCATAGCAGGTACAGCAGCCAATATGGGAATTGAGGTTGACCCTCCTGTCCTTGAACCTAAAGAGAAGGAACTTGTGTAG

Coding sequence (CDS)

ATGGCGTCTTCCCTCTCCACCTATCATCAACATCATCTTCTTTCTCCTTCATTTTCTTCCAAAATTACTGCTAATTCCAAGCATCTTTCCTCTCCATTTCTCACTTCACCCTCGTCTGGGTTGTCTTCAAATTTCAATTTCTCGCTTCGGTTCCTCAGTAATGGCCAATCTTCCTCCCTCATCTCTCCCACTCCAAGGCGTCTCAGTGTTGTCTCAATGGCCCCTCCTAAAGCCAAGCCCGGTGGAAAATCCAAGAAGGTAATTGGGATGATAAAGCTTGCTCTGGAGGCTGGAAAGGCTACCCCAGCTCCTCCTGTAGGCCCTGCTCTTGGTTCGAAGGGTGTTAATATTATGGCCTTCTGTAAGGATTACAATGCCAAGACAGCTGACAAGGCCGGCTACGTTATTCCAGTCGAAATTACTGTTTACGATGATAAAAGTTTTACTTTCGTGCTGAAGACTCCACCTGCTTCAGTTCTTCTTCTCAAGGCTGCCGGAGTTGAAAAAGGATCAAAAGATCCTAAGGGAGAAAAAGTGGGAAAGATAACCATTGAACAGTTGCGCGTGATTGCTGCAGAAAAGTTACCAGATTTGAATTGCACAACCATTGAATCTGCAATGAGAATCATAGCAGGTACAGCAGCCAATATGGGAATTGAGGTTGACCCTCCTGTCCTTGAACCTAAAGAGAAGGAACTTGTGTAG

Protein sequence

MASSLSTYHQHHLLSPSFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSLISPTPRRLSVVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRVIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKEKELV

Homology

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BLAST of Cla97C01G001380 vs. NCBI nr
Match: XP_008437462.1 (PREDICTED: 50S ribosomal protein L11, chloroplastic [Cucumis melo])

HSP 1 Score: 421.8 bits (1083), Expect = 1.5e-114
Identity = 222/234 (94.87%), Postives = 228/234 (97.44%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSL 60
           MASSLSTYHQHHLLSPSFSSKI+ANS HLSSPFLTS SSGLSS FNFSLRFL+NGQSSSL
Sbjct: 1   MASSLSTYHQHHLLSPSFSSKISANSNHLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           IS TPRRLSVVSMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISHTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRVIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKEKELV 235
           K+TIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPK+K +V
Sbjct: 181 KVTIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKQKAVV 234

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BLAST of Cla97C01G001380 vs. NCBI nr
Match: KGN49966.1 (hypothetical protein Csa_5G146890 [Cucumis sativus])

HSP 1 Score: 419.5 bits (1077), Expect = 7.7e-114
Identity = 221/234 (94.44%), Postives = 227/234 (97.01%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSL 60
           MASS+STYHQHHLLSPSFSSKI+A+S  LSSPFLTS SSGLSS FNFSLRFL+NGQSSSL
Sbjct: 46  MASSISTYHQHHLLSPSFSSKISASSNRLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 105

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISPTPRRLSVVSMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 106 ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 165

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG
Sbjct: 166 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 225

Query: 181 KITIEQLRVIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKEKELV 235
           KITIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIE+DPPVLEPK K LV
Sbjct: 226 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEIDPPVLEPKTKALV 279

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BLAST of Cla97C01G001380 vs. NCBI nr
Match: XP_004145879.2 (PREDICTED: 50S ribosomal protein L11, chloroplastic [Cucumis sativus])

HSP 1 Score: 419.5 bits (1077), Expect = 7.7e-114
Identity = 221/234 (94.44%), Postives = 227/234 (97.01%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSL 60
           MASS+STYHQHHLLSPSFSSKI+A+S  LSSPFLTS SSGLSS FNFSLRFL+NGQSSSL
Sbjct: 1   MASSISTYHQHHLLSPSFSSKISASSNRLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISPTPRRLSVVSMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRVIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKEKELV 235
           KITIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIE+DPPVLEPK K LV
Sbjct: 181 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEIDPPVLEPKTKALV 234

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BLAST of Cla97C01G001380 vs. NCBI nr
Match: XP_022155580.1 (50S ribosomal protein L11, chloroplastic [Momordica charantia])

HSP 1 Score: 401.4 bits (1030), Expect = 2.2e-108
Identity = 216/235 (91.91%), Postives = 223/235 (94.89%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITAN-SKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSS 60
           MASSLSTY QHHLLSP FSSK +AN  K LSSPFL  P+SGLSSNFNFSL+FLSNGQSSS
Sbjct: 1   MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSS 60

Query: 61  LISPTPRRLSVVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA 120
           L+S  PRRLSV+SMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA
Sbjct: 61  LLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA 120

Query: 121 FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKV 180
           FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+ EKV
Sbjct: 121 FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKV 180

Query: 181 GKITIEQLRVIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKEKELV 235
           GKITIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPK+KELV
Sbjct: 181 GKITIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 234

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BLAST of Cla97C01G001380 vs. NCBI nr
Match: XP_022970097.1 (50S ribosomal protein L11, chloroplastic [Cucurbita maxima])

HSP 1 Score: 397.1 bits (1019), Expect = 4.1e-107
Identity = 213/234 (91.03%), Postives = 218/234 (93.16%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSL 60
           MASSLS YH        FSSK TANSKHLSS FL SPSSG SS FNFSLRF SNGQSSSL
Sbjct: 1   MASSLSIYH-------PFSSKFTANSKHLSSSFLASPSSGFSSKFNFSLRFFSNGQSSSL 60

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISPTPRRLSVVSMAPPKAKPGGKSKKVIG+IKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISPTPRRLSVVSMAPPKAKPGGKSKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+ +KVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVG 180

Query: 181 KITIEQLRVIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKEKELV 235
           KITIEQLRVIAAEKLPDLNCTTIESAMR+IAGTAANMGIEVDPPVLEPK+KELV
Sbjct: 181 KITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227

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BLAST of Cla97C01G001380 vs. TrEMBL
Match: tr|A0A1S3AU30|A0A1S3AU30_CUCME (50S ribosomal protein L11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482876 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.0e-114
Identity = 222/234 (94.87%), Postives = 228/234 (97.44%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSL 60
           MASSLSTYHQHHLLSPSFSSKI+ANS HLSSPFLTS SSGLSS FNFSLRFL+NGQSSSL
Sbjct: 1   MASSLSTYHQHHLLSPSFSSKISANSNHLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           IS TPRRLSVVSMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISHTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRVIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKEKELV 235
           K+TIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPK+K +V
Sbjct: 181 KVTIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKQKAVV 234

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BLAST of Cla97C01G001380 vs. TrEMBL
Match: tr|A0A0A0KQJ8|A0A0A0KQJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146890 PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 5.1e-114
Identity = 221/234 (94.44%), Postives = 227/234 (97.01%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSL 60
           MASS+STYHQHHLLSPSFSSKI+A+S  LSSPFLTS SSGLSS FNFSLRFL+NGQSSSL
Sbjct: 46  MASSISTYHQHHLLSPSFSSKISASSNRLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 105

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISPTPRRLSVVSMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 106 ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 165

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG
Sbjct: 166 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 225

Query: 181 KITIEQLRVIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKEKELV 235
           KITIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIE+DPPVLEPK K LV
Sbjct: 226 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEIDPPVLEPKTKALV 279

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BLAST of Cla97C01G001380 vs. TrEMBL
Match: tr|A0A2P5CJA2|A0A2P5CJA2_9ROSA (Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_282650 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.1e-88
Identity = 185/240 (77.08%), Postives = 208/240 (86.67%), Query Frame = 0


Query: 1   MASSLSTYHQ----HHLLSPSFSSKITANSKHLSSPFLTSPSS--GLSSNFNFSLRFLSN 60
           MASSL  YH     H+    +  + + +N+K LSS FL SPSS    +S+  FSLRFL +
Sbjct: 1   MASSLCAYHNNIIPHYTSFKTKPNSLHSNAKQLSSSFLGSPSSITSFTSSSEFSLRFLQS 60

Query: 61  GQSSSLISPTPRRLSVVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKG 120
            Q   L+SP+ RRLSVV+MAPPKAKPGGK+KKV+G+IKLALEAGKATPAPPVGPALG+KG
Sbjct: 61  KQ-PQLLSPS-RRLSVVAMAPPKAKPGGKAKKVVGLIKLALEAGKATPAPPVGPALGAKG 120

Query: 121 VNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP 180
           VNIMAFCKDYNA+TADKAGYVIPVEITV+DDKSFTF+LKTPPASVLLLKAAGVEKGSKDP
Sbjct: 121 VNIMAFCKDYNARTADKAGYVIPVEITVFDDKSFTFILKTPPASVLLLKAAGVEKGSKDP 180

Query: 181 KGEKVGKITIEQLRVIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKEKELV 235
           K EKVGKITIEQL+ IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPK+KE++
Sbjct: 181 KLEKVGKITIEQLKAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKEVL 238

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BLAST of Cla97C01G001380 vs. TrEMBL
Match: tr|A0A218WIA6|A0A218WIA6_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr018123 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 4.8e-88
Identity = 185/234 (79.06%), Postives = 208/234 (88.89%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSL 60
           MASS+ST   HH L   F+S+   N+K LS+PFL+SP+SGLSS+ NFSL+F    Q   L
Sbjct: 1   MASSIST---HHSLCSLFTSE-KRNAK-LSTPFLSSPASGLSSSSNFSLQFPKMKQ-PQL 60

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           +SP+ R LSV++MAPP  KPGGK+KKV+G+IKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  LSPSRRSLSVIAMAPP--KPGGKAKKVVGLIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTF+LKTPPASVLLLKAAGVEKGSKDPK +KVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVEKGSKDPKMQKVG 180

Query: 181 KITIEQLRVIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKEKELV 235
           KITIEQLR +AAEKLPDLNCT+IESAMRIIAGTAANMGI VDPPVLEPK+K+L+
Sbjct: 181 KITIEQLRAVAAEKLPDLNCTSIESAMRIIAGTAANMGIHVDPPVLEPKKKQLL 226

[Close]

BLAST of Cla97C01G001380 vs. TrEMBL
Match: tr|A0A2P5AMJ0|A0A2P5AMJ0_PARAD (Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_317910 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.8e-87
Identity = 184/240 (76.67%), Postives = 206/240 (85.83%), Query Frame = 0


Query: 1   MASSLSTYHQ----HHLLSPSFSSKITANSKHLSSPFLTSPSS--GLSSNFNFSLRFLSN 60
           MASSL  YH     H+  S +  + + +N+K L S  L SPSS    +S+  FSLRFL +
Sbjct: 1   MASSLCAYHNNIIPHYTSSKTKPNSLHSNAKQLCSSLLGSPSSITSFTSSSEFSLRFLQS 60

Query: 61  GQSSSLISPTPRRLSVVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKG 120
            Q   L+SP  RRLSVV+MAPPKAKPGGK+KKV+G+IKLALEAGKATPAPPVGPALG+KG
Sbjct: 61  KQ-PQLLSPF-RRLSVVAMAPPKAKPGGKAKKVVGLIKLALEAGKATPAPPVGPALGAKG 120

Query: 121 VNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP 180
           VNIMAFCKDYNA+TADKAGYVIPVEITV+DDKSFTF+LKTPPASVLLLKAAGVEKGSKDP
Sbjct: 121 VNIMAFCKDYNARTADKAGYVIPVEITVFDDKSFTFILKTPPASVLLLKAAGVEKGSKDP 180

Query: 181 KGEKVGKITIEQLRVIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKEKELV 235
           K EKVGKITIEQL+ IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPK+KE++
Sbjct: 181 KLEKVGKITIEQLKAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKEVL 238

[Close]

BLAST of Cla97C01G001380 vs. Swiss-Prot
Match: sp|Q9MAP3|RK11_ARATH (50S ribosomal protein L11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 4.0e-82
Identity = 162/212 (76.42%), Postives = 188/212 (88.68%), Query Frame = 0


Query: 23  TANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSLISPTPRRLSVVSMAPPKAKPGG 82
           T++S H +S    S S+ LSS  N S++FL   Q S L+S TPR L+V++MAPP  KPGG
Sbjct: 13  TSSSLHPNSKLSHSLSAKLSSKANVSVQFLGKKQ-SPLLSSTPRFLTVIAMAPP--KPGG 72

Query: 83  KSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITV 142
           K+KKV+G+IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADKAGY+IPVEITV
Sbjct: 73  KAKKVVGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAGYIIPVEITV 132

Query: 143 YDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRVIAAEKLPDLNCTT 202
           +DDKSFTF+LKTPPASVLLLKAAGVEKGSKDP+ +KVG ITI+QLR IAAEKLPDLNCTT
Sbjct: 133 FDDKSFTFILKTPPASVLLLKAAGVEKGSKDPQQDKVGVITIDQLRTIAAEKLPDLNCTT 192

Query: 203 IESAMRIIAGTAANMGIEVDPPVLEPKEKELV 235
           IESAMRIIAGTAANMGI++DPP+LEPK+K ++
Sbjct: 193 IESAMRIIAGTAANMGIDIDPPILEPKKKAVL 221

[Close]

BLAST of Cla97C01G001380 vs. Swiss-Prot
Match: sp|P31164|RK11_SPIOL (50S ribosomal protein L11, chloroplastic OS=Spinacia oleracea OX=3562 GN=rpl11 PE=1 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.3e-76
Identity = 160/220 (72.73%), Postives = 184/220 (83.64%), Query Frame = 0


Query: 15  SPSFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSLISPTPRRLSVVSMA 74
           +PS SS  +   + L S  LT  S  LSSN   SL+FL++    S  S + RRLS+V+MA
Sbjct: 8   APSSSSITSPIPRKLCSSLLTPSSLSLSSNPRNSLQFLNSKLFLSPPSTSHRRLSIVAMA 67

Query: 75  PPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGY 134
           P   KP GK+KKVIG+IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADK G+
Sbjct: 68  P---KP-GKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKPGF 127

Query: 135 VIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRVIAAEK 194
           VIPVEITV+DDKSFTF+LKTPPASVLLLKA+G EKGSKDP+ EKVGKITI+QLR IA EK
Sbjct: 128 VIPVEITVFDDKSFTFILKTPPASVLLLKASGAEKGSKDPQMEKVGKITIDQLRGIATEK 187

Query: 195 LPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKEKELV 235
           LPDLNCTTIESAMRIIAGTAANMGI++DPP+L  K+KE++
Sbjct: 188 LPDLNCTTIESAMRIIAGTAANMGIDIDPPILVKKKKEVI 223

[Close]

BLAST of Cla97C01G001380 vs. Swiss-Prot
Match: sp|O78412|RK11_GUITH (50S ribosomal protein L11, chloroplastic OS=Guillardia theta OX=55529 GN=rpl11 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.4e-50
Identity = 101/138 (73.19%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 84  SKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVY 143
           +KKV+ +IKLALEAGKATPAPPVGPALG +GVNI+ FCKDYNA+TADKAG +IPVEITVY
Sbjct: 2   AKKVVAIIKLALEAGKATPAPPVGPALGQRGVNIVMFCKDYNARTADKAGLIIPVEITVY 61

Query: 144 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRVIAAEKLPDLNCTTI 203
           +DKS+TFVLKTPPASVLL KAAGV+KGS +PK  +VG +T +Q+  IA  KLPDLN   +
Sbjct: 62  EDKSYTFVLKTPPASVLLAKAAGVQKGSGNPKKTQVGSVTKKQVEEIAQTKLPDLNTRRL 121

Query: 204 ESAMRIIAGTAANMGIEV 222
           ESA+RII GTA NMGI V
Sbjct: 122 ESAIRIIEGTAKNMGIGV 139

[Close]

BLAST of Cla97C01G001380 vs. Swiss-Prot
Match: sp|B7JWT8|RL11_CYAP8 (50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 8801) OX=41431 GN=rplK PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.1e-50
Identity = 99/138 (71.74%), Postives = 116/138 (84.06%), Query Frame = 0


Query: 84  SKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVY 143
           +KKV+ MIKLAL AGKA PAPPVGPALG  GVNIMAFCK+YNAKTAD+AG VIPVEI+V+
Sbjct: 2   AKKVVAMIKLALPAGKANPAPPVGPALGQHGVNIMAFCKEYNAKTADQAGMVIPVEISVF 61

Query: 144 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRVIAAEKLPDLNCTTI 203
           +D+SFTFVLKTPPASVL+ KAAGVE+GS  P   KVG IT +QLR IA  K+PDLN   I
Sbjct: 62  EDRSFTFVLKTPPASVLIRKAAGVERGSNQPNKTKVGSITQDQLREIAQTKMPDLNANDI 121

Query: 204 ESAMRIIAGTAANMGIEV 222
           E+AM+I+AGTA NMG+ +
Sbjct: 122 EAAMKIVAGTARNMGVTI 139

[Close]

BLAST of Cla97C01G001380 vs. Swiss-Prot
Match: sp|B8HVL5|RL11_CYAP4 (50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=rplK PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.5e-49
Identity = 94/138 (68.12%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 84  SKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVY 143
           +KKV+ +IKLA+ AGKA PAPP+GPALG  GVNIM FCK+YNA+TAD+AG VIPVEI+VY
Sbjct: 2   AKKVVAIIKLAITAGKANPAPPIGPALGQHGVNIMMFCKEYNARTADQAGLVIPVEISVY 61

Query: 144 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRVIAAEKLPDLNCTTI 203
           +D+SFTF+LKTPPASVL+ KAAG+E+GS +P  +KVGKIT  QLR IA  KLPDLN   +
Sbjct: 62  EDRSFTFILKTPPASVLIQKAAGIERGSGEPNKKKVGKITTAQLREIAQTKLPDLNANDV 121

Query: 204 ESAMRIIAGTAANMGIEV 222
           ++AMRI+AGTA NMG+ +
Sbjct: 122 DAAMRIVAGTARNMGVTI 139

[Close]

BLAST of Cla97C01G001380 vs. TAIR10
Match: AT1G32990.1 (plastid ribosomal protein l11)

HSP 1 Score: 305.8 bits (782), Expect = 2.2e-83
Identity = 162/212 (76.42%), Postives = 188/212 (88.68%), Query Frame = 0


Query: 23  TANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSLISPTPRRLSVVSMAPPKAKPGG 82
           T++S H +S    S S+ LSS  N S++FL   Q S L+S TPR L+V++MAPP  KPGG
Sbjct: 13  TSSSLHPNSKLSHSLSAKLSSKANVSVQFLGKKQ-SPLLSSTPRFLTVIAMAPP--KPGG 72

Query: 83  KSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITV 142
           K+KKV+G+IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADKAGY+IPVEITV
Sbjct: 73  KAKKVVGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAGYIIPVEITV 132

Query: 143 YDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRVIAAEKLPDLNCTT 202
           +DDKSFTF+LKTPPASVLLLKAAGVEKGSKDP+ +KVG ITI+QLR IAAEKLPDLNCTT
Sbjct: 133 FDDKSFTFILKTPPASVLLLKAAGVEKGSKDPQQDKVGVITIDQLRTIAAEKLPDLNCTT 192

Query: 203 IESAMRIIAGTAANMGIEVDPPVLEPKEKELV 235
           IESAMRIIAGTAANMGI++DPP+LEPK+K ++
Sbjct: 193 IESAMRIIAGTAANMGIDIDPPILEPKKKAVL 221

[Close]

BLAST of Cla97C01G001380 vs. TAIR10
Match: AT5G51610.1 (Ribosomal protein L11 family protein)

HSP 1 Score: 164.9 bits (416), Expect = 6.2e-41
Identity = 104/218 (47.71%), Postives = 133/218 (61.01%), Query Frame = 0


Query: 14  LSPSFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSLISPTPRRLSVVSM 73
           ++ S  S + + +  L  P   S S+ L+S  N S +FL+N Q S L+S TPR L+V++ 
Sbjct: 1   MASSSLSHLCSCTSSLHHPLSHSISANLTSKTNLSFQFLANRQ-SPLLSSTPRSLTVIAG 60

Query: 74  APPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAG 133
           A   +K  GK+KKV+G++K+ + AGKAT APP                            
Sbjct: 61  ATAPSKLRGKTKKVVGIVKMNVWAGKATLAPP---------------------------- 120

Query: 134 YVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRVIAAE 193
                      D+SFTF+LKTPP S LLLKAAGV+KGSKDPK  KVG ITI+Q+R IA  
Sbjct: 121 -----------DQSFTFILKTPPTSFLLLKAAGVKKGSKDPKQIKVGMITIDQVRKIAEV 178

Query: 194 KLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKEK 232
           KLP+LNCTTI S MR IAGTA NMGI++DPP+LEPK K
Sbjct: 181 KLPELNCTTIVSTMRTIAGTAGNMGIDIDPPILEPKNK 178

[Close]

BLAST of Cla97C01G001380 vs. TAIR10
Match: AT4G35490.1 (mitochondrial ribosomal protein L11)

HSP 1 Score: 102.8 bits (255), Expect = 2.9e-22
Identity = 61/140 (43.57%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 85  KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTAD-KAGYVIPVEITVY 144
           + V   I+L + AG A PAPPVGPALG   +N+MAFCKD+NA+T   K    + V IT +
Sbjct: 11  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAF 70

Query: 145 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRVIAAEKLPDLNC--T 204
            D SF F +K+P  S  + KAAGV+KGS  P    V  +++  +  IA  K  D  C   
Sbjct: 71  KDNSFEFTVKSPTVSWYIKKAAGVDKGSTRPGHLSVTTLSVRHVYEIAKVKQTDPFCQYM 130

Query: 205 TIESAMRIIAGTAANMGIEV 222
            +ES  + I GTA +MGI++
Sbjct: 131 PLESICKSIIGTANSMGIKI 150

The following BLAST results are available for this feature:

BLAST of Cla97C01G001380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437462.1	1.5e-114	94.87	PREDICTED: 50S ribosomal protein L11, chloroplastic [Cucumis melo]	[more]
KGN49966.1	7.7e-114	94.44	hypothetical protein Csa_5G146890 [Cucumis sativus]	[more]
XP_004145879.2	7.7e-114	94.44	PREDICTED: 50S ribosomal protein L11, chloroplastic [Cucumis sativus]	[more]
XP_022155580.1	2.2e-108	91.91	50S ribosomal protein L11, chloroplastic [Momordica charantia]	[more]
XP_022970097.1	4.1e-107	91.03	50S ribosomal protein L11, chloroplastic [Cucurbita maxima]	[more]

BLAST of Cla97C01G001380 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AU30\|A0A1S3AU30_CUCME	1.0e-114	94.87	50S ribosomal protein L11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482876...	[more]
tr\|A0A0A0KQJ8\|A0A0A0KQJ8_CUCSA	5.1e-114	94.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146890 PE=3 SV=1	[more]
tr\|A0A2P5CJA2\|A0A2P5CJA2_9ROSA	2.1e-88	77.08	Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_282650 PE=3 SV=1	[more]
tr\|A0A218WIA6\|A0A218WIA6_PUNGR	4.8e-88	79.06	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr018123 PE=3 SV=1	[more]
tr\|A0A2P5AMJ0\|A0A2P5AMJ0_PARAD	1.8e-87	76.67	Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_317910 PE=3 SV=...	[more]

BLAST of Cla97C01G001380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9MAP3\|RK11_ARATH	4.0e-82	76.42	50S ribosomal protein L11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1...	[more]
sp\|P31164\|RK11_SPIOL	3.3e-76	72.73	50S ribosomal protein L11, chloroplastic OS=Spinacia oleracea OX=3562 GN=rpl11 P...	[more]
sp\|O78412\|RK11_GUITH	1.4e-50	73.19	50S ribosomal protein L11, chloroplastic OS=Guillardia theta OX=55529 GN=rpl11 P...	[more]
sp\|B7JWT8\|RL11_CYAP8	3.1e-50	71.74	50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 8801) OX=41431 GN=rplK P...	[more]
sp\|B8HVL5\|RL11_CYAP4	1.5e-49	68.12	50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=39...	[more]

BLAST of Cla97C01G001380 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32990.1	2.2e-83	76.42	plastid ribosomal protein l11	[more]
AT5G51610.1	6.2e-41	47.71	Ribosomal protein L11 family protein	[more]
AT4G35490.1	2.9e-22	43.57	mitochondrial ribosomal protein L11	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR020785	Ribosomal_L11_CS
IPR020784	Ribosomal_L11_N
IPR006519	Ribosomal_L11_bac-typ
IPR036796	Ribosomal_L11/L12_N_sf
IPR036769	Ribosomal_L11_C_sf
IPR020783	Ribosomal_L11_C
IPR000911	Ribosomal_L11/L12

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0000027	ribosomal large subunit assembly
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0070180	large ribosomal subunit rRNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G001380.1	Cla97C01G001380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000911	Ribosomal protein L11/L12	SMART	SM00649	rl11c	coord: 91..222 e-value: 4.4E-80 score: 282.0
IPR000911	Ribosomal protein L11/L12	PANTHER	PTHR11661	60S RIBOSOMAL PROTEIN L12	coord: 61..234
IPR000911	Ribosomal protein L11/L12	HAMAP	MF_00736	Ribosomal_L11	coord: 87..223 score: 30.743
IPR000911	Ribosomal protein L11/L12	CDD	cd00349	Ribosomal_L11	coord: 91..221 e-value: 6.64182E-70 score: 211.926
IPR020783	Ribosomal protein L11, C-terminal	PFAM	PF00298	Ribosomal_L11	coord: 153..221 e-value: 9.9E-23 score: 80.4
IPR036769	Ribosomal protein L11, C-terminal domain superfamily	GENE3D	G3DSA:1.10.10.250		coord: 154..222 e-value: 6.4E-27 score: 95.7
IPR036769	Ribosomal protein L11, C-terminal domain superfamily	SUPERFAMILY	SSF46906	Ribosomal protein L11, C-terminal domain	coord: 149..222
IPR036796	Ribosomal protein L11/L12, N-terminal domain superfamily	GENE3D	G3DSA:3.30.1550.10		coord: 84..153 e-value: 1.4E-32 score: 113.1
IPR036796	Ribosomal protein L11/L12, N-terminal domain superfamily	SUPERFAMILY	SSF54747	Ribosomal L11/L12e N-terminal domain	coord: 81..166
IPR006519	Ribosomal protein L11, bacterial-type	TIGRFAM	TIGR01632	TIGR01632	coord: 85..222 e-value: 1.6E-62 score: 207.6
IPR020784	Ribosomal protein L11, N-terminal	PFAM	PF03946	Ribosomal_L11_N	coord: 91..148 e-value: 3.4E-29 score: 100.3
None	No IPR available	PANTHER	PTHR11661:SF7	50S RIBOSOMAL PROTEIN L11, CHLOROPLASTIC-RELATED	coord: 61..234
None	No IPR available	PRODOM	PD001367		coord: 118..155 e-value: 9.0E-15 score: 195.0
IPR020785	Ribosomal protein L11, conserved site	PROSITE	PS00359	RIBOSOMAL_L11	coord: 208..222

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G001380	Cla004983	Watermelon (97103) v1	wmwmbB235
Cla97C01G001380	Csa5G146890	Cucumber (Chinese Long) v2	cuwmbB336
Cla97C01G001380	MELO3C005800	Melon (DHL92) v3.5.1	mewmbB008
Cla97C01G001380	ClCG01G001360	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G001380	CSPI05G04110	Wild cucumber (PI 183967)	cpiwmbB349
Cla97C01G001380	Cucsa.193370	Cucumber (Gy14) v1	cgywmbB357
Cla97C01G001380	CmaCh15G013320	Cucurbita maxima (Rimu)	cmawmbB288
Cla97C01G001380	CmoCh15G013940	Cucurbita moschata (Rifu)	cmowmbB270
Cla97C01G001380	Lsi09G001230	Bottle gourd (USVL1VR-Ls)	lsiwmbB007
Cla97C01G001380	CsGy5G001360	Cucumber (Gy14) v2	cgybwmbB319
Cla97C01G001380	MELO3C005800.2	Melon (DHL92) v3.6.1	medwmbB006
Cla97C01G001380	Carg21321	Silver-seed gourd	carwmbB0376
Cla97C01G001380	CsaV3_5G001490	Cucumber (Chinese Long) v3	cucwmbB351
Cla97C01G001380	Bhi12G000049	Wax gourd	wgowmbB055

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G001380	Watermelon (97103) v2	wmbwmbB034
Cla97C01G001380	Silver-seed gourd	carwmbB0739
Cla97C01G001380	Cucurbita maxima (Rimu)	cmawmbB605
Cla97C01G001380	Cucurbita moschata (Rifu)	cmowmbB581