Cla022690 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla022690
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Drought-induced protein 1 (AHRD V1 ***- Q6XPS8_9FABA)
Location	Chr8 : 25761012 .. 25761302 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCAATTGCTCTGAGTCAGCTTGCCACCGGCCTGAGTGTGCTGGCCGGCGCCGTGGTGGTGAAGTCCATCATTGAACAGAAACTACCGACGGCAGGGACGATGCCGAGGTGTCCGACTTGTAATGGGTCGGGTCGGGTCACATGTCTATGTGCCCGGTGGTCGGATGGAGATGTTGGGTGCCGATCATGTTCCGGGTCGGGTCGGATGTCGTGTAGAAGTCGCGGTGGTGGGGGAAGAGGGCGGCCGATCACCCTACAATTATCGACTAACCAACTAAACCGTTGA

mRNA sequence

ATGGATCCAATTGCTCTGAGTCAGCTTGCCACCGGCCTGAGTGTGCTGGCCGGCGCCGTGGTGGTGAAGTCCATCATTGAACAGAAACTACCGACGGCAGGGACGATGCCGAGGTGTCCGACTTGTAATGGGTCGGGTCGGGTCACATGTCTATGTGCCCGGTGGTCGGATGGAGATGTTGGGTGCCGATCATGTTCCGGGTCGGGTCGGATGTCGTGTAGAAGTCGCGGTGGTGGGGGAAGAGGGCGGCCGATCACCCTACAATTATCGACTAACCAACTAAACCGTTGA

Coding sequence (CDS)

ATGGATCCAATTGCTCTGAGTCAGCTTGCCACCGGCCTGAGTGTGCTGGCCGGCGCCGTGGTGGTGAAGTCCATCATTGAACAGAAACTACCGACGGCAGGGACGATGCCGAGGTGTCCGACTTGTAATGGGTCGGGTCGGGTCACATGTCTATGTGCCCGGTGGTCGGATGGAGATGTTGGGTGCCGATCATGTTCCGGGTCGGGTCGGATGTCGTGTAGAAGTCGCGGTGGTGGGGGAAGAGGGCGGCCGATCACCCTACAATTATCGACTAACCAACTAAACCGTTGA

Protein sequence

MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR

Homology

[Close]

BLAST of Cla022690 vs. TrEMBL
Match: A0A0A0LKQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G351540 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 7.4e-42
Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 1


Query: 1  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          MD IALSQLATGLSVLAGAVVVKS+IEQKLP AG+MPRCPTC GSGRVTC+C RWSDGDV
Sbjct: 1  MDQIALSQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCICVRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR 97
          GCRSCSGSGRMSCRS GGGGRGRPIT+QLS +Q NR
Sbjct: 61 GCRSCSGSGRMSCRSCGGGGRGRPITVQLSMSQSNR 96

[Close]

BLAST of Cla022690 vs. TrEMBL
Match: W9RCB8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001360 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.1e-32
Identity = 65/95 (68.42%), Postives = 80/95 (84.21%), Query Frame = 1


Query: 1  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M+PI L+Q+ATGLSVL GAV+VKS+++QK P AG  PRCP+CNG+GRVTCLC+RWSDGD+
Sbjct: 1  MEPIVLTQVATGLSVLVGAVLVKSVMDQK-PMAGPFPRCPSCNGTGRVTCLCSRWSDGDI 60

Query: 61 GCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLN 96
          GCR+C+GSGRM C S GG G GRPIT Q+S  + N
Sbjct: 61 GCRTCAGSGRMGCSSCGGSGTGRPITAQISVRRPN 94

[Close]

BLAST of Cla022690 vs. TrEMBL
Match: A0A067GQ88_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034351mg PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 5.9e-31
Identity = 64/96 (66.67%), Postives = 79/96 (82.29%), Query Frame = 1


Query: 1  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M P  L+Q+ATGLSVLAGA +VKS+++QK P AG   RCP+CNG+GRVTC+C RWSDGDV
Sbjct: 1  MGPFVLTQVATGLSVLAGAALVKSVMDQK-PMAGPFDRCPSCNGTGRVTCMCTRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR 97
          GCR+C+GSGRM+CRS GG G GRP+ +QLS  + NR
Sbjct: 61 GCRTCAGSGRMACRSCGGTGTGRPLPVQLSVRRPNR 95

[Close]

BLAST of Cla022690 vs. TrEMBL
Match: V4VFK9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033174mg PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 5.9e-31
Identity = 64/96 (66.67%), Postives = 79/96 (82.29%), Query Frame = 1


Query: 1  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M P  L+Q+ATGLSVLAGA +VKS+++QK P AG   RCP+CNG+GRVTC+C RWSDGDV
Sbjct: 1  MGPFVLTQVATGLSVLAGAALVKSVMDQK-PMAGPFDRCPSCNGTGRVTCMCTRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR 97
          GCR+C+GSGRM+CRS GG G GRP+ +QLS  + NR
Sbjct: 61 GCRTCAGSGRMACRSCGGTGTGRPLPVQLSVRRPNR 95

[Close]

BLAST of Cla022690 vs. TrEMBL
Match: A0A059D890_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03495 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 7.7e-31
Identity = 64/95 (67.37%), Postives = 78/95 (82.11%), Query Frame = 1


Query: 1  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M PI L+QLATGLSVLAGA +VKS+++QK P AG  PRCP+CNG+GRV C+C+RWSDGDV
Sbjct: 1  MGPIVLTQLATGLSVLAGAALVKSVMDQK-PMAGPFPRCPSCNGTGRVACMCSRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLN 96
          GCR+C+GSGRM C S GG G GRP+ +QLS  + N
Sbjct: 61 GCRTCAGSGRMGCSSCGGTGTGRPLPVQLSVRRPN 94

[Close]

BLAST of Cla022690 vs. NCBI nr
Match: gi|449450367|ref|XP_004142934.1| (PREDICTED: uncharacterized protein LOC101220122 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-41
Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 1


Query: 1  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          MD IALSQLATGLSVLAGAVVVKS+IEQKLP AG+MPRCPTC GSGRVTC+C RWSDGDV
Sbjct: 1  MDQIALSQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCICVRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR 97
          GCRSCSGSGRMSCRS GGGGRGRPIT+QLS +Q NR
Sbjct: 61 GCRSCSGSGRMSCRSCGGGGRGRPITVQLSMSQSNR 96

[Close]

BLAST of Cla022690 vs. NCBI nr
Match: gi|703112866|ref|XP_010100228.1| (hypothetical protein L484_001360 [Morus notabilis])

HSP 1 Score: 145.6 bits (366), Expect = 4.5e-32
Identity = 65/95 (68.42%), Postives = 80/95 (84.21%), Query Frame = 1


Query: 1  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M+PI L+Q+ATGLSVL GAV+VKS+++QK P AG  PRCP+CNG+GRVTCLC+RWSDGD+
Sbjct: 1  MEPIVLTQVATGLSVLVGAVLVKSVMDQK-PMAGPFPRCPSCNGTGRVTCLCSRWSDGDI 60

Query: 61 GCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLN 96
          GCR+C+GSGRM C S GG G GRPIT Q+S  + N
Sbjct: 61 GCRTCAGSGRMGCSSCGGSGTGRPITAQISVRRPN 94

[Close]

BLAST of Cla022690 vs. NCBI nr
Match: gi|719977986|ref|XP_010249022.1| (PREDICTED: uncharacterized protein LOC104591728 [Nelumbo nucifera])

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-31
Identity = 67/96 (69.79%), Postives = 78/96 (81.25%), Query Frame = 1


Query: 1  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M PI +SQLATGL VLAGAV+VKS++EQK P AG  PRCP+CNG+GRV C+C RWSDGDV
Sbjct: 1  MGPIVVSQLATGLGVLAGAVLVKSVMEQK-PMAGPWPRCPSCNGTGRVNCMCTRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR 97
          GCR+C+GSGRM+C S GG G GRPI +QLS    NR
Sbjct: 61 GCRTCAGSGRMACSSCGGTGTGRPIPVQLSVRSPNR 95

[Close]

BLAST of Cla022690 vs. NCBI nr
Match: gi|729335332|ref|XP_010538148.1| (PREDICTED: uncharacterized protein LOC104812595 [Tarenaya hassleriana])

HSP 1 Score: 142.5 bits (358), Expect = 3.8e-31
Identity = 64/96 (66.67%), Postives = 78/96 (81.25%), Query Frame = 1


Query: 1  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M P+ L+QLATGLSVLAGAV+VKS+++QK P AG  PRCPTCNG+GRV C+C+RWSDGDV
Sbjct: 1  MGPVVLTQLATGLSVLAGAVLVKSVMDQK-PMAGQFPRCPTCNGTGRVACMCSRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR 97
          GCR C+GSGR +C S GG G GRPI +Q++    NR
Sbjct: 61 GCRGCAGSGRRACNSCGGSGTGRPIPVQITVQPPNR 95

[Close]

BLAST of Cla022690 vs. NCBI nr
Match: gi|567891017|ref|XP_006438029.1| (hypothetical protein CICLE_v10033174mg [Citrus clementina])

HSP 1 Score: 141.4 bits (355), Expect = 8.5e-31
Identity = 64/96 (66.67%), Postives = 79/96 (82.29%), Query Frame = 1


Query: 1  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M P  L+Q+ATGLSVLAGA +VKS+++QK P AG   RCP+CNG+GRVTC+C RWSDGDV
Sbjct: 1  MGPFVLTQVATGLSVLAGAALVKSVMDQK-PMAGPFDRCPSCNGTGRVTCMCTRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR 97
          GCR+C+GSGRM+CRS GG G GRP+ +QLS  + NR
Sbjct: 61 GCRTCAGSGRMACRSCGGTGTGRPLPVQLSVRRPNR 95

The following BLAST results are available for this feature:

BLAST of Cla022690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKQ8_CUCSA	7.4e-42	87.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G351540 PE=4 SV=1	[more]
W9RCB8_9ROSA	3.1e-32	68.42	Uncharacterized protein OS=Morus notabilis GN=L484_001360 PE=4 SV=1	[more]
A0A067GQ88_CITSI	5.9e-31	66.67	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034351mg PE=4 SV=1	[more]
V4VFK9_9ROSI	5.9e-31	66.67	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033174mg PE=4 SV=1	[more]
A0A059D890_EUCGR	7.7e-31	67.37	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03495 PE=4 SV=1	[more]

BLAST of Cla022690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450367\|ref\|XP_004142934.1\|	1.1e-41	87.50	PREDICTED: uncharacterized protein LOC101220122 [Cucumis sativus]	[more]
gi\|703112866\|ref\|XP_010100228.1\|	4.5e-32	68.42	hypothetical protein L484_001360 [Morus notabilis]	[more]
gi\|719977986\|ref\|XP_010249022.1\|	1.3e-31	69.79	PREDICTED: uncharacterized protein LOC104591728 [Nelumbo nucifera]	[more]
gi\|729335332\|ref\|XP_010538148.1\|	3.8e-31	66.67	PREDICTED: uncharacterized protein LOC104812595 [Tarenaya hassleriana]	[more]
gi\|567891017\|ref\|XP_006438029.1\|	8.5e-31	66.67	hypothetical protein CICLE_v10033174mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla022690	Cla022690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34687	FAMILY NOT NAMED	coord: 1..96 score: 9.6
None	No IPR available	PANTHER	PTHR34687:SF1	CHAPERONE PROTEIN DNAJ-LIKE PROTEIN	coord: 1..96 score: 9.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla022690	Cla97C08G160870	Watermelon (97103) v2	wmwmbB100
Cla022690	Csa2G351540	Cucumber (Chinese Long) v2	cuwmB111
Cla022690	MELO3C010741	Melon (DHL92) v3.5.1	mewmB300
Cla022690	ClCG08G017160	Watermelon (Charleston Gray)	wcgwmB400
Cla022690	CSPI02G17830	Wild cucumber (PI 183967)	cpiwmB116
Cla022690	Cucsa.394980	Cucumber (Gy14) v1	cgywmB706
Cla022690	Lsi08G015980	Bottle gourd (USVL1VR-Ls)	lsiwmB465
Cla022690	Cp4.1LG07g00760	Cucurbita pepo (Zucchini)	cpewmB785
Cla022690	MELO3C010741.2	Melon (DHL92) v3.6.1	medwmB295
Cla022690	CsaV3_2G025430	Cucumber (Chinese Long) v3	cucwmB124
Cla022690	Bhi04G000470	Wax gourd	wgowmB297

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla022690	Cucumber (Gy14) v2	cgybwmB108
Cla022690	Cucumber (Gy14) v2	cgybwmB349
Cla022690	Melon (DHL92) v3.6.1	medwmB049
Cla022690	Silver-seed gourd	carwmB0172
Cla022690	Silver-seed gourd	carwmB0621
Cla022690	Silver-seed gourd	carwmB0685
Cla022690	Cucumber (Chinese Long) v3	cucwmB399
Cla022690	Wax gourd	wgowmB540
Cla022690	Cucumber (Gy14) v1	cgywmB078
Cla022690	Cucurbita maxima (Rimu)	cmawmB154
Cla022690	Cucurbita maxima (Rimu)	cmawmB364
Cla022690	Cucurbita maxima (Rimu)	cmawmB670
Cla022690	Cucurbita maxima (Rimu)	cmawmB753
Cla022690	Cucurbita moschata (Rifu)	cmowmB139
Cla022690	Cucurbita moschata (Rifu)	cmowmB358
Cla022690	Cucurbita moschata (Rifu)	cmowmB666
Cla022690	Cucurbita moschata (Rifu)	cmowmB748
Cla022690	Wild cucumber (PI 183967)	cpiwmB382
Cla022690	Melon (DHL92) v3.5.1	mewmB048
Cla022690	Cucumber (Chinese Long) v2	cuwmB376
Cla022690	Cucurbita pepo (Zucchini)	cpewmB022
Cla022690	Cucurbita pepo (Zucchini)	cpewmB101
Cla022690	Cucurbita pepo (Zucchini)	cpewmB397
Cla022690	Cucurbita pepo (Zucchini)	cpewmB789
Cla022690	Bottle gourd (USVL1VR-Ls)	lsiwmB296