Bhi04G000470 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi04G000470
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Chaperone protein dnaJ-like protein
Location	chr4 : 13129955 .. 13130655 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAATCTAACGAAGTAACCAATTTTATTTTCCTCTTTCCCTAACTTCCAATTTTACTTTCTTCTAACTTCTTCTTTTTGTTTATTTAAACCCCAATTTCCCCCCTTTTTCTCATTCATCCACTTTCATTTCACATCCTTTTTCCAATCTAAACATAATGGATCCCATTGCTCTGGGTCAGCTTGCCACCGGCCTGAGCGTACTCGCCGGTGCCGTGGTGGTGAAGTCCGTCATCGACCAGAAACTACCGATGCCTGGGACGATGCCGAGGTGTCCGACATGTAATGGGTCGGGACGGGTCACGTGCCTATGTGCCCGGTGGTCGGATGGAGACGTTGGGTGCCGATCATGTTCCGGGTCGGGTCGGATGTCGTGTAGAAGTTGCGGTGGCGGTGGGAGAGGACGACCGATTACCATACAATTATCGACTAGCCAACTCAACCGTCAATTTTGAAAGATTCTTGTTGATATTTGAACTTCAATACAGTTGCTATACTTGTTTTGATGATTCAAACAAGTCAAATATTTGTAAAGCATGAGACAAAGTTCATTATTTGTTATAATAATATTACAGTGATTTGTTACGAGTTCTTGCTTTGGGATTTTGGTTGTTTTATTTTTATTTTTATTTTTTTTTGAATATTACATCACATCAGGCTTGGAAATGTTAACAACTATCAACCAGAGAAGATACTGAGTG

mRNA sequence

GGAAAATCTAACGAAGTAACCAATTTTATTTTCCTCTTTCCCTAACTTCCAATTTTACTTTCTTCTAACTTCTTCTTTTTGTTTATTTAAACCCCAATTTCCCCCCTTTTTCTCATTCATCCACTTTCATTTCACATCCTTTTTCCAATCTAAACATAATGGATCCCATTGCTCTGGGTCAGCTTGCCACCGGCCTGAGCGTACTCGCCGGTGCCGTGGTGGTGAAGTCCGTCATCGACCAGAAACTACCGATGCCTGGGACGATGCCGAGGTGTCCGACATGTAATGGGTCGGGACGGGTCACGTGCCTATGTGCCCGGTGGTCGGATGGAGACGTTGGGTGCCGATCATGTTCCGGGTCGGGTCGGATGTCGTGTAGAAGTTGCGGTGGCGGTGGGAGAGGACGACCGATTACCATACAATTATCGACTAGCCAACTCAACCGTCAATTTTGAAAGATTCTTGTTGATATTTGAACTTCAATACAGTTGCTATACTTGTTTTGATGATTCAAACAAGTCAAATATTTGTAAAGCATGAGACAAAGTTCATTATTTGTTATAATAATATTACAGTGATTTGTTACGAGTTCTTGCTTTGGGATTTTGGTTGTTTTATTTTTATTTTTATTTTTTTTTGAATATTACATCACATCAGGCTTGGAAATGTTAACAACTATCAACCAGAGAAGATACTGAGTG

Coding sequence (CDS)

ATGGATCCCATTGCTCTGGGTCAGCTTGCCACCGGCCTGAGCGTACTCGCCGGTGCCGTGGTGGTGAAGTCCGTCATCGACCAGAAACTACCGATGCCTGGGACGATGCCGAGGTGTCCGACATGTAATGGGTCGGGACGGGTCACGTGCCTATGTGCCCGGTGGTCGGATGGAGACGTTGGGTGCCGATCATGTTCCGGGTCGGGTCGGATGTCGTGTAGAAGTTGCGGTGGCGGTGGGAGAGGACGACCGATTACCATACAATTATCGACTAGCCAACTCAACCGTCAATTTTGA

Protein sequence

MDPIALGQLATGLSVLAGAVVVKSVIDQKLPMPGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITIQLSTSQLNRQF

Homology

[Close]

BLAST of Bhi04G000470 vs. TAIR10
Match: AT5G43260.1 (chaperone protein dnaJ-related)

HSP 1 Score: 117.1 bits (292), Expect = 6.2e-27
Identity = 68/98 (69.39%), Postives = 78/98 (79.59%), Query Frame = 0


Query: 1  MDPIALGQLATGLSVLAGAVVVKSVIDQKLPMPGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M PI + QLATG+SVLAGAV +KSV+DQK PM G  PRCPTCNG+GRVTC C+RWSDGDV
Sbjct: 1  MSPIVITQLATGISVLAGAVFIKSVMDQK-PMAGQFPRCPTCNGTGRVTCFCSRWSDGDV 60

Query: 61 GCRSCSXXXXXXXXXXXXXXXGRPITIQLSTSQLNRQF 99
          GCR CS XXXXXXXXXXXX  GRP+  Q++    NR +
Sbjct: 61 GCRRCSGXXXXXXXXXXXXGTGRPLPAQITVQPPNRPY 97

[Close]

BLAST of Bhi04G000470 vs. TrEMBL
Match: tr|A0A0A0LKQ8|A0A0A0LKQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351540 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-30
Identity = 84/96 (87.50%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 1  MDPIALGQLATGLSVLAGAVVVKSVIDQKLPMPGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          MD IAL QLATGLSVLAGAVVVKSVI+QKLPM G+MPRCPTC GSGRVTC+C RWSDGDV
Sbjct: 1  MDQIALSQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCICVRWSDGDV 60

Query: 61 GCRSCSXXXXXXXXXXXXXXXGRPITIQLSTSQLNR 97
          GCRSCS XXXXXXXXXXXXXXGRPIT+QLS SQ NR
Sbjct: 61 GCRSCSGXXXXXXXXXXXXXXGRPITVQLSMSQSNR 96

[Close]

BLAST of Bhi04G000470 vs. TrEMBL
Match: tr|W9RCB8|W9RCB8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_001360 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.9e-24
Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 0


Query: 1  MDPIALGQLATGLSVLAGAVVVKSVIDQKLPMPGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M+PI L Q+ATGLSVL GAV+VKSV+DQK PM G  PRCP+CNG+GRVTCLC+RWSDGD+
Sbjct: 1  MEPIVLTQVATGLSVLVGAVLVKSVMDQK-PMAGPFPRCPSCNGTGRVTCLCSRWSDGDI 60

Query: 61 GCRSCSXXXXXXXXXXXXXXXGRPITIQLSTSQLN 96
          GCR+C+ XXXXXXXXXXXXX GRPIT Q+S  + N
Sbjct: 61 GCRTCAGXXXXXXXXXXXXXTGRPITAQISVRRPN 94

[Close]

BLAST of Bhi04G000470 vs. TrEMBL
Match: tr|D7MP99|D7MP99_ARALL (Uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_917342 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.0e-23
Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 1  MDPIALGQLATGLSVLAGAVVVKSVIDQKLPMPGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M PI + QLATGLSVLAGAV +KSV+DQK PM G  PRCPTCNG+GRVTC C+RWSDGDV
Sbjct: 1  MSPIVITQLATGLSVLAGAVFIKSVLDQK-PMAGQFPRCPTCNGTGRVTCFCSRWSDGDV 60

Query: 61 GCRSCSXXXXXXXXXXXXXXXGRPITIQLSTSQLNRQF 99
          GCR CS XXXXXX        GRP+  Q++    NR +
Sbjct: 61 GCRRCSGXXXXXXSNCGGSGTGRPLPAQITVQPPNRPY 97

[Close]

BLAST of Bhi04G000470 vs. TrEMBL
Match: tr|A0A178UAQ7|A0A178UAQ7_ARATH (Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At5g41250 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-23
Identity = 69/98 (70.41%), Postives = 78/98 (79.59%), Query Frame = 0


Query: 1  MDPIALGQLATGLSVLAGAVVVKSVIDQKLPMPGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M PI + QLATGLSVLAGAV +KSV+DQK PM G  PRCPTCNG+GRVTC C+RWSDGDV
Sbjct: 1  MSPIVITQLATGLSVLAGAVFIKSVMDQK-PMAGQFPRCPTCNGTGRVTCFCSRWSDGDV 60

Query: 61 GCRSCSXXXXXXXXXXXXXXXGRPITIQLSTSQLNRQF 99
          GCR CS XXXXXXXXXXXX  GRP+  Q++    NR +
Sbjct: 61 GCRRCSGXXXXXXXXXXXXGTGRPLPAQITVQPPNRPY 97

[Close]

BLAST of Bhi04G000470 vs. TrEMBL
Match: tr|Q94CB5|Q94CB5_ARATH (Chaperone protein dnaJ-like protein OS=Arabidopsis thaliana OX=3702 GN=MNL12.8 PE=2 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 2.3e-23
Identity = 68/98 (69.39%), Postives = 78/98 (79.59%), Query Frame = 0


Query: 1  MDPIALGQLATGLSVLAGAVVVKSVIDQKLPMPGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M PI + QLATG+SVLAGAV +KSV+DQK PM G  PRCPTCNG+GRVTC C+RWSDGDV
Sbjct: 1  MSPIVITQLATGISVLAGAVFIKSVMDQK-PMAGQFPRCPTCNGTGRVTCFCSRWSDGDV 60

Query: 61 GCRSCSXXXXXXXXXXXXXXXGRPITIQLSTSQLNRQF 99
          GCR CS XXXXXXXXXXXX  GRP+  Q++    NR +
Sbjct: 61 GCRRCSGXXXXXXXXXXXXGTGRPLPAQITVQPPNRPY 97

[Close]

BLAST of Bhi04G000470 vs. NCBI nr
Match: XP_004142934.1 (PREDICTED: uncharacterized protein LOC101220122 [Cucumis sativus] >KGN62373.1 hypothetical protein Csa_2G351540 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-30
Identity = 84/96 (87.50%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 1  MDPIALGQLATGLSVLAGAVVVKSVIDQKLPMPGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          MD IAL QLATGLSVLAGAVVVKSVI+QKLPM G+MPRCPTC GSGRVTC+C RWSDGDV
Sbjct: 1  MDQIALSQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCICVRWSDGDV 60

Query: 61 GCRSCSXXXXXXXXXXXXXXXGRPITIQLSTSQLNR 97
          GCRSCS XXXXXXXXXXXXXXGRPIT+QLS SQ NR
Sbjct: 61 GCRSCSGXXXXXXXXXXXXXXGRPITVQLSMSQSNR 96

[Close]

BLAST of Bhi04G000470 vs. NCBI nr
Match: XP_022132135.1 (uncharacterized protein LOC111005075 [Momordica charantia])

HSP 1 Score: 131.3 bits (329), Expect = 1.7e-27
Identity = 78/98 (79.59%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 1  MDPIALGQLATGLSVLAGAVVVKSVIDQKLPMPGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          MDP+ L QLATGLSV+AGAVVVKSV+DQK PM G +P CPTCNGSGRVTC+C RWSDGD 
Sbjct: 1  MDPMGLAQLATGLSVVAGAVVVKSVMDQK-PMAGPLPTCPTCNGSGRVTCICVRWSDGDF 60

Query: 61 GCRSCSXXXXXXXXXXXXXXXGRPITIQLSTSQLNRQF 99
          GCRSC+ XXXXXXXXXXXXXXGRPIT+QLS  Q NR+F
Sbjct: 61 GCRSCAGXXXXXXXXXXXXXXGRPITVQLSAGQPNRRF 97

[Close]

BLAST of Bhi04G000470 vs. NCBI nr
Match: XP_010100228.1 (uncharacterized protein LOC21384964 [Morus notabilis] >EXB81983.1 hypothetical protein L484_001360 [Morus notabilis])

HSP 1 Score: 119.0 bits (297), Expect = 9.0e-24
Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 0


Query: 1  MDPIALGQLATGLSVLAGAVVVKSVIDQKLPMPGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M+PI L Q+ATGLSVL GAV+VKSV+DQK PM G  PRCP+CNG+GRVTCLC+RWSDGD+
Sbjct: 1  MEPIVLTQVATGLSVLVGAVLVKSVMDQK-PMAGPFPRCPSCNGTGRVTCLCSRWSDGDI 60

Query: 61 GCRSCSXXXXXXXXXXXXXXXGRPITIQLSTSQLN 96
          GCR+C+ XXXXXXXXXXXXX GRPIT Q+S  + N
Sbjct: 61 GCRTCAGXXXXXXXXXXXXXTGRPITAQISVRRPN 94

[Close]

BLAST of Bhi04G000470 vs. NCBI nr
Match: XP_002863676.1 (uncharacterized protein LOC9299752 [Arabidopsis lyrata subsp. lyrata] >EFH39935.1 hypothetical protein ARALYDRAFT_917342 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-23
Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 1  MDPIALGQLATGLSVLAGAVVVKSVIDQKLPMPGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M PI + QLATGLSVLAGAV +KSV+DQK PM G  PRCPTCNG+GRVTC C+RWSDGDV
Sbjct: 1  MSPIVITQLATGLSVLAGAVFIKSVLDQK-PMAGQFPRCPTCNGTGRVTCFCSRWSDGDV 60

Query: 61 GCRSCSXXXXXXXXXXXXXXXGRPITIQLSTSQLNRQF 99
          GCR CS XXXXXX        GRP+  Q++    NR +
Sbjct: 61 GCRRCSGXXXXXXSNCGGSGTGRPLPAQITVQPPNRPY 97

[Close]

BLAST of Bhi04G000470 vs. NCBI nr
Match: XP_010538148.1 (PREDICTED: uncharacterized protein LOC104812595 [Tarenaya hassleriana])

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-23
Identity = 67/96 (69.79%), Postives = 77/96 (80.21%), Query Frame = 0


Query: 1  MDPIALGQLATGLSVLAGAVVVKSVIDQKLPMPGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M P+ L QLATGLSVLAGAV+VKSV+DQK PM G  PRCPTCNG+GRV C+C+RWSDGDV
Sbjct: 1  MGPVVLTQLATGLSVLAGAVLVKSVMDQK-PMAGQFPRCPTCNGTGRVACMCSRWSDGDV 60

Query: 61 GCRSCSXXXXXXXXXXXXXXXGRPITIQLSTSQLNR 97
          GCR C+  XXXXXXXXXX   GRPI +Q++    NR
Sbjct: 61 GCRGCAGSXXXXXXXXXXSGTGRPIPVQITVQPPNR 95

The following BLAST results are available for this feature:

BLAST of Bhi04G000470 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi04G000470 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G43260.1	6.2e-27	69.39	chaperone protein dnaJ-related	[more]

BLAST of Bhi04G000470 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LKQ8\|A0A0A0LKQ8_CUCSA	1.1e-30	87.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351540 PE=4 SV=1	[more]
tr\|W9RCB8\|W9RCB8_9ROSA	5.9e-24	73.68	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_001360 PE=4 SV=1	[more]
tr\|D7MP99\|D7MP99_ARALL	1.0e-23	64.29	Uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRA...	[more]
tr\|A0A178UAQ7\|A0A178UAQ7_ARATH	1.3e-23	70.41	Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At5g41250 PE=4 ...	[more]
tr\|Q94CB5\|Q94CB5_ARATH	2.3e-23	69.39	Chaperone protein dnaJ-like protein OS=Arabidopsis thaliana OX=3702 GN=MNL12.8 P...	[more]

BLAST of Bhi04G000470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142934.1	1.7e-30	87.50	PREDICTED: uncharacterized protein LOC101220122 [Cucumis sativus] >KGN62373.1 hy...	[more]
XP_022132135.1	1.7e-27	79.59	uncharacterized protein LOC111005075 [Momordica charantia]	[more]
XP_010100228.1	9.0e-24	73.68	uncharacterized protein LOC21384964 [Morus notabilis] >EXB81983.1 hypothetical p...	[more]
XP_002863676.1	1.5e-23	64.29	uncharacterized protein LOC9299752 [Arabidopsis lyrata subsp. lyrata] >EFH39935....	[more]
XP_010538148.1	1.5e-23	69.79	PREDICTED: uncharacterized protein LOC104812595 [Tarenaya hassleriana]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016020	membrane
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M000470	Bhi04M000470	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34687:SF1	CHAPERONE PROTEIN DNAJ-LIKE PROTEIN	coord: 1..96
None	No IPR available	PANTHER	PTHR34687	FAMILY NOT NAMED	coord: 1..96

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi04G000470	Csa2G351540	Cucumber (Chinese Long) v2	cuwgoB162
Bhi04G000470	MELO3C010741	Melon (DHL92) v3.5.1	mewgoB322
Bhi04G000470	ClCG08G017160	Watermelon (Charleston Gray)	wcgwgoB612
Bhi04G000470	CSPI02G17830	Wild cucumber (PI 183967)	cpiwgoB159
Bhi04G000470	Cucsa.394980	Cucumber (Gy14) v1	cgywgoB784
Bhi04G000470	CmaCh12G000820	Cucurbita maxima (Rimu)	cmawgoB0206
Bhi04G000470	Lsi08G015980	Bottle gourd (USVL1VR-Ls)	lsiwgoB591
Bhi04G000470	Cp4.1LG07g00760	Cucurbita pepo (Zucchini)	cpewgoB1039
Bhi04G000470	MELO3C010741.2	Melon (DHL92) v3.6.1	medwgoB321
Bhi04G000470	CsaV3_2G025430	Cucumber (Chinese Long) v3	cucwgoB169
Bhi04G000470	Cla022690	Watermelon (97103) v1	wgowmB297
Bhi04G000470	Cla97C08G160870	Watermelon (97103) v2	wgowmbB313

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi04G000470	Wax gourd	wgowgoB089
Bhi04G000470	Cucumber (Gy14) v1	cgywgoB086
Bhi04G000470	Cucumber (Gy14) v2	cgybwgoB157
Bhi04G000470	Cucumber (Gy14) v2	cgybwgoB465
Bhi04G000470	Cucurbita maxima (Rimu)	cmawgoB0211
Bhi04G000470	Cucurbita maxima (Rimu)	cmawgoB0510
Bhi04G000470	Cucurbita maxima (Rimu)	cmawgoB0872
Bhi04G000470	Cucurbita maxima (Rimu)	cmawgoB0943
Bhi04G000470	Cucurbita moschata (Rifu)	cmowgoB0206
Bhi04G000470	Cucurbita moschata (Rifu)	cmowgoB0509
Bhi04G000470	Cucurbita moschata (Rifu)	cmowgoB0868
Bhi04G000470	Cucurbita moschata (Rifu)	cmowgoB0944
Bhi04G000470	Cucurbita pepo (Zucchini)	cpewgoB0032
Bhi04G000470	Cucurbita pepo (Zucchini)	cpewgoB0141
Bhi04G000470	Cucurbita pepo (Zucchini)	cpewgoB0536
Bhi04G000470	Cucurbita pepo (Zucchini)	cpewgoB1044
Bhi04G000470	Wild cucumber (PI 183967)	cpiwgoB491
Bhi04G000470	Melon (DHL92) v3.6.1	medwgoB062
Bhi04G000470	Cucumber (Chinese Long) v3	cucwgoB501
Bhi04G000470	Cucumber (Chinese Long) v2	cuwgoB489
Bhi04G000470	Bottle gourd (USVL1VR-Ls)	lsiwgoB367
Bhi04G000470	Melon (DHL92) v3.5.1	mewgoB063
Bhi04G000470	Silver-seed gourd	carwgoB0231
Bhi04G000470	Silver-seed gourd	carwgoB0740
Bhi04G000470	Silver-seed gourd	carwgoB0810