Cla021108 (gene) Watermelon (97103) v1

Overview
NameCla021108
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPeptidyl-prolyl cis-trans isomerase (AHRD V1 ***- A0YIS2_LYNSP); contains Interpro domain(s) IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type
LocationChr5 : 497434 .. 500920 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACCTGATGACTTTCCAAGCTTTGTCAGAGAAGGTATGGATCATGCTGCTATTTCATAGCTTTATCAGGGTATCTTCAAGGCATTTGCTTTCTAAATGTAACTCTGATGTCTTTCCTGAAAAGAACAGAGAGTAAAATGTAAAATAAAGTCAAATGTATATAAAAAATTACAGATTTTCTAATGTGTGGCTCAGGTTTCGAGGTTAAGGTAATAGCACCAGAGACCTATGTTAAACGTGACTCTGGGCTCATATATTGGGATATCGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTTTTATTTTACAACTACAATATCTTTTCTTCAATTTTCTTACAGAATCAGGATTTATCTTTTAGTGTTGTTGTTCAAAGTGCCCCTATACTGTGAAATGAAGTATTAGCATTCTTATTAAGCCTTAACTTTGGCATCTGTCACATGTTTCTATCCTCAGACGATATCAAGGGTTAGAAGAGAGTTTAGCATATGCAGTTCAATATTGTTTGGCTTGCCCATTTGTTTGTCACATTTTAAGATTGGCACCTTAAAGATTATTCATGTAAGAAATCCTAGGAGGCTAAATGATACTTGGTGAAAATTCACTTATAATTCTCAACCGATTGTTGTTCCATTGATGACTACTTTGTATACGGATCTCAGAAGCTTAATAAAAATGCTATATGCACGTGCACCTTTTATGATAACAGCATGACTTAGAATTGGTTAACACAAGATGATTTTAATTCGGATACATAGTTTAGTAATCAGGTCTCTCTGAAAGACTAAGCTGAGTTTGAGGGGTGGAATTTCCAGGAACTTCAGAATGATCAATTGATCTCTGGAAATGTATGAATAATGTTTCTTGGATTCACCTGAATAACTGTAAGAATAAATCAAATGTTGTTGGTAAAAATAATTCACCAACCTTTATATAAACTACTGATTTTGTAATAAGTGATCAATATTTAATTTTTTGTTGAATGTTTTTGACATCAGTGGAGTTTTCTGGTGTACATTGTGACTGTGAAGGTCCTTTCAGGTGATCTTTCACTATGTCGGCTATAATGAATCTGGTCGTCGAATTGACAGCACATACTTACAGGGTTCTCCTGCCAGAATCCGTGTGGGCACTAATGCGTTGGTCCCAGGTAGTTAAATTACGCCCCATCACCACACACACCCACACAAAAAAGGGAATAAAACACTCACCAATCTTGTAAAATCAAGAAGAGATTGACTTACAGTTGAAAATAATCAGATAGCATCTGAAAGAGAAATATTGTAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAGAGGAGAATAATAATTCCACCAGAACTTGGACCACCTGTGAGTTCTCAAGCATATGATTATTGCTTCAGTTTTATACCAACATCTTAAATTTCTTGTAACTGATTGTTATATATGCAGCAATTTTTAATCAAGCAAGGAAAGACCACCCATAATGATCTCCCATTTGCTGCAGTTGTATTTGCCTGTCATATAATTCATCTCCAGCTAGACAATCCTCTATCTTTTACCATGAGATTGTTTGTTTATATCAGTATAGAAAATTAAACGACGTTTTCTTGCTTAGCAGAAATCTAGGAACTCAATAGGCAAGAGCACACTAATATTGGAGAAGAACATACTAACTTGGGGCAGATTAGATAGTCGCTCACTCAAGATAAGGGAGTAATATAATGGAGGAACTCCAGCAGGCATTGGCAAATAAGTTGAACTAAATAAGAGGACAATAATAGTAAACGTACAACAGGTGAAAGGAAATCAACCCAAGAAGCAATAAGATTACAATAATTTCCTCAAACAAGATTTAATAAAAAAAAGAAAAGAAACAATAGTTGCAAAAAGTTATTATGGAAAAAAAAACCTTCAAAGTATAGGAGTAATTGATTGTGAAAACTGAAAAGCCTCTGAAATACACCCAGAAAACCCTCAAAACTTGGTACTCTCTAAAACTTCCCCCCATTTTTTACAATATAAGGTTCTGTGTTTTCTTTCAGAGCGAATTTCCAGAGAATGGACCTTACTAATCCAGAAAACCTTAGTTCTATATTTAAACCAGTGACCACAGAGAAGATATTCTAAAAATCTCGAAGCTTGTTGGAGAAGCACTGCAATGGGTATAATTCCTTTCGGAGTTTATTTGAAGATCTCTTCATGTAGGGGCATTGGAAAAACAGGCTCTCTGGATCTTCATTCTCAGAAGACATACTAATATGGAGAAAGGCCAAAGAAAGGAATGACCTTCCAATCAGTCCTGTTGACTCCTCCTAATGTTAAGGGCCAGATGAAGAATTCAATATCTTTAGGATTTCTTTCTAAATTGAAAATCATTGGGGATAGCTTTGGGTCAGACCACTGAGGTTGCTATTCTTGATTGACAAAACTACCATTTAATGAATTAAAAAAAAAATCTTGTTATTCAGAGATCCACACATCTTCCCTAGAATAAATATTGTCACCCTTTCCTGCCTTTATAGGAAAGTAAAGTTTCACGAAGATGGTTATTCGATAATGAGTCTCCTATGACTTTTTTACTTTGGACCTCTTCTTTTGGCACAAGCAATATCTCTTAAGAACCTCATACTTGCAACCTCATATTTGCATCGGTAGAGTTCTTTAATGCACTCTCTTGTGAAAAAATTTGTACCATTTTGATGCAACAGCCACTATTTTCTGCATCAAATTATCGTAAACCTAAACCTCCTGAGAGCAGATGAAGAACTGAAGTCCATTGAATTAAGTGAATTCCTCCTTCAGTACATAACCTCCTTTGCAGTCATACTCCTTGGGTACATCCTTTTTGGAACAAATGAAACTTCTTTTTAAATACATATAATCTGACGTATCTTTCTCGCAAGTAGTACGAATGGGAAGTTTGTGATTAAATTCAAAGAAACCTGCAGATTGGGCATGATACGAGAGCATATTGCCCTGTCTTAGAGCCACAAACTCGCTCTTTGTCCATTCTTATCTGCCAGCCTCTGAAGCTGGATTCTGGTAGTTTTCTGCTCCACTTATTTTGTGCATTTCTTCCATGCAAGTAAGACAAAGGAGGAATTCTGGATCTCAGTTATCTAATCAGATATGCAGATAAACTTTATTGTTTTGTCTTGGAGTACAATTGTCTTCACCGTTCCCATATCTTGAAAAACTTATGGATACCCATGTCTTACTGCTTTAAGCTGAAAAGGCAGAATGCTCGCAGCAATGTTCACTTGTCTGCTTACCTTGGTGGTCACCATTTTTTATATTTCTGTGACTAATGTGATATCTGATGATTTATCTCAATTGATTTTGACTTTTGATTATCTACAGGTGGGGCCTTCCACATTTTTCAGCTCAAAGCAGTTTGAAGTCTTTGATGTGGAACTGTTAAGCGTCCAGGATTGTCAGAGGAGGACAATAGCCTTTTACTCTGATATTGTTTGCAACTAG

mRNA sequence

ATGCACCTGATGACTTTCCAAGCTTTGTCAGAGAAGGTATGGATCATGCTGCTATTTCATAGCTTTATCAGGGTATCTTCAAGGCATTTGCTTTCTAAATGTTTCGAGGTTAAGGTAATAGCACCAGAGACCTATGTTAAACGTGACTCTGGGCTCATATATTGGGATATCGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTGATCTTTCACTATGTCGGCTATAATGAATCTGGTCGTCGAATTGACAGCACATACTTACAGGGTTCTCCTGCCAGAATCCGTGTGGGCACTAATGCGTTGGTCCCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAGAGGAGAATAATAATTCCACCAGAACTTGGACCACCTGTGGGGCCTTCCACATTTTTCAGCTCAAAGCAGTTTGAAGTCTTTGATGTGGAACTGTTAAGCGTCCAGGATTGTCAGAGGAGGACAATAGCCTTTTACTCTGATATTGTTTGCAACTAG

Coding sequence (CDS)

ATGCACCTGATGACTTTCCAAGCTTTGTCAGAGAAGGTATGGATCATGCTGCTATTTCATAGCTTTATCAGGGTATCTTCAAGGCATTTGCTTTCTAAATGTTTCGAGGTTAAGGTAATAGCACCAGAGACCTATGTTAAACGTGACTCTGGGCTCATATATTGGGATATCGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTGATCTTTCACTATGTCGGCTATAATGAATCTGGTCGTCGAATTGACAGCACATACTTACAGGGTTCTCCTGCCAGAATCCGTGTGGGCACTAATGCGTTGGTCCCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAGAGGAGAATAATAATTCCACCAGAACTTGGACCACCTGTGGGGCCTTCCACATTTTTCAGCTCAAAGCAGTTTGAAGTCTTTGATGTGGAACTGTTAAGCGTCCAGGATTGTCAGAGGAGGACAATAGCCTTTTACTCTGATATTGTTTGCAACTAG

Protein sequence

MHLMTFQALSEKVWIMLLFHSFIRVSSRHLLSKCFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN
Homology
[Close]
BLAST of Cla021108 vs. Swiss-Prot
Match: FK202_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana GN=FKBP20-2 PE=1 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 6.3e-61
Identity = 111/138 (80.43%), Postives = 122/138 (88.41%), Query Frame = 1 

Query: 35  FEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGYNESGRRIDSTYLQGSP 94
           FEVKV+A + Y+K DSGLIY D  VG GD PKDGQQV FHY+GYNESGRRIDSTY+QGSP
Sbjct: 105 FEVKVLASDNYIKADSGLIYRDFNVGQGDFPKDGQQVTFHYIGYNESGRRIDSTYIQGSP 164

Query: 95  ARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSV 154
           ARIR+GTNALVPGFE GIR M+PGG+RRIIIPPELGPPVGPSTFFSSKQFEVFDVELLS+
Sbjct: 165 ARIRMGTNALVPGFEMGIRDMKPGGRRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSI 224

Query: 155 QDCQRRT-IAFYSDIVCN 172
           Q+C+RRT I FYSD+ C+
Sbjct: 225 QNCERRTIIGFYSDVTCS 242

[Close]
BLAST of Cla021108 vs. Swiss-Prot
Match: FKBA_ECOLI (FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli (strain K12) GN=fkpA PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.4e-14
Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 1 

Query: 41  APETYVKRDS-GLIYWDIEVGNGDCPKDGQQVIFHYVGYNESGRRIDSTYLQGSPARIRV 100
           A E  VK  S GL+Y  +E G G+ PKD   V+ +Y G    G+  D++Y +G P   R+
Sbjct: 136 AKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL 195

Query: 101 GTNALVPGFEEGIRGMRPGGKRRIIIPPELG------PPVGPSTFFSSKQFEVFDVELLS 156
             + ++PG+ EG++ ++ GGK +++IPPEL       P + P++        VFDVELL 
Sbjct: 196 --DGVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPGIPPNSTL------VFDVELLD 249

[Close]
BLAST of Cla021108 vs. Swiss-Prot
Match: FKBA_ECO57 (FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli O157:H7 GN=fkpA PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.4e-14
Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 1 

Query: 41  APETYVKRDS-GLIYWDIEVGNGDCPKDGQQVIFHYVGYNESGRRIDSTYLQGSPARIRV 100
           A E  VK  S GL+Y  +E G G+ PKD   V+ +Y G    G+  D++Y +G P   R+
Sbjct: 136 AKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL 195

Query: 101 GTNALVPGFEEGIRGMRPGGKRRIIIPPELG------PPVGPSTFFSSKQFEVFDVELLS 156
             + ++PG+ EG++ ++ GGK +++IPPEL       P + P++        VFDVELL 
Sbjct: 196 --DGVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPGIPPNSTL------VFDVELLD 249

[Close]
BLAST of Cla021108 vs. Swiss-Prot
Match: FKBA_ECOL6 (FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fkpA PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.4e-14
Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 1 

Query: 41  APETYVKRDS-GLIYWDIEVGNGDCPKDGQQVIFHYVGYNESGRRIDSTYLQGSPARIRV 100
           A E  VK  S GL+Y  +E G G+ PKD   V+ +Y G    G+  D++Y +G P   R+
Sbjct: 136 AKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL 195

Query: 101 GTNALVPGFEEGIRGMRPGGKRRIIIPPELG------PPVGPSTFFSSKQFEVFDVELLS 156
             + ++PG+ EG++ ++ GGK +++IPPEL       P + P++        VFDVELL 
Sbjct: 196 --DGVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPGIPPNSTL------VFDVELLD 249

[Close]
BLAST of Cla021108 vs. Swiss-Prot
Match: FK171_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic OS=Arabidopsis thaliana GN=FKBP17-1 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 8.3e-13
Identity = 51/172 (29.65%), Postives = 78/172 (45.35%), Query Frame = 1 

Query: 21  SFIRVSSRHLLSKCFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVG--Y 80
           S I V+S  + S CF    +A  + +    G+   D+ +G+GD P +G Q+  HY G   
Sbjct: 58  SIIAVTSSVVSSFCFSSPALADFSEIPNSGGVKALDLRIGDGDVPIEGDQIEIHYYGRLA 117

Query: 81  NESGRRIDSTY------LQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELG-- 140
            + G R DSTY       +  P    +G++ ++PG E  +R M+ GG RR++IPP  G  
Sbjct: 118 AKQGWRFDSTYDHKDSNGEAVPFTFVLGSSKVIPGIETAVRSMKVGGIRRVVIPPSQGYQ 177

Query: 141 ----PPVGPSTFFSSKQFE-------------------VFDVELLSVQDCQR 160
                P+ P+ F   + F                    VFD+EL+S +   R
Sbjct: 178 NTSQEPLPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLVFDIELVSTRRLHR 229

[Close]
BLAST of Cla021108 vs. TrEMBL
Match: A0A0A0L5Q7_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_3G118090 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 6.5e-73
Identity = 138/153 (90.20%), Postives = 141/153 (92.16%), Query Frame = 1 

Query: 19  FHSFIRVSSRHLLSKCFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGY 78
           F SF+R          FEVKVIAPE+YVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGY
Sbjct: 116 FPSFVREG--------FEVKVIAPESYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGY 175

Query: 79  NESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTF 138
           NESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRR+IIPPELGPPVGPSTF
Sbjct: 176 NESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRMIIPPELGPPVGPSTF 235

Query: 139 FSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 172
           FSSKQFEVFDVELLSVQDCQRRTI FYSDIVCN
Sbjct: 236 FSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN 260

[Close]
BLAST of Cla021108 vs. TrEMBL
Match: U5FNZ4_POPTR (Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa GN=POPTR_0014s04510g PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 5.3e-67
Identity = 126/153 (82.35%), Postives = 135/153 (88.24%), Query Frame = 1 

Query: 19  FHSFIRVSSRHLLSKCFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGY 78
           F SFIR          FEVKV+APE Y+KRDSGLIY D EVG GDCPKDGQQV FHYVGY
Sbjct: 70  FPSFIREG--------FEVKVVAPENYIKRDSGLIYRDFEVGEGDCPKDGQQVTFHYVGY 129

Query: 79  NESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTF 138
           NESGRRIDSTYLQGSPA+IR+GTNAL+PGFEEGIR MRPGGKRRII+PPELGPPVGPSTF
Sbjct: 130 NESGRRIDSTYLQGSPAKIRMGTNALIPGFEEGIRDMRPGGKRRIIVPPELGPPVGPSTF 189

Query: 139 FSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 172
           FSSKQFEVFDVELL+V+DCQRRTI FYSD+VCN
Sbjct: 190 FSSKQFEVFDVELLNVKDCQRRTIGFYSDVVCN 214

[Close]
BLAST of Cla021108 vs. TrEMBL
Match: U5FSF9_POPTR (Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa GN=POPTR_0014s04510g PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 5.3e-67
Identity = 126/153 (82.35%), Postives = 135/153 (88.24%), Query Frame = 1 

Query: 19  FHSFIRVSSRHLLSKCFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGY 78
           F SFIR          FEVKV+APE Y+KRDSGLIY D EVG GDCPKDGQQV FHYVGY
Sbjct: 42  FPSFIREG--------FEVKVVAPENYIKRDSGLIYRDFEVGEGDCPKDGQQVTFHYVGY 101

Query: 79  NESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTF 138
           NESGRRIDSTYLQGSPA+IR+GTNAL+PGFEEGIR MRPGGKRRII+PPELGPPVGPSTF
Sbjct: 102 NESGRRIDSTYLQGSPAKIRMGTNALIPGFEEGIRDMRPGGKRRIIVPPELGPPVGPSTF 161

Query: 139 FSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 172
           FSSKQFEVFDVELL+V+DCQRRTI FYSD+VCN
Sbjct: 162 FSSKQFEVFDVELLNVKDCQRRTIGFYSDVVCN 186

[Close]
BLAST of Cla021108 vs. TrEMBL
Match: B9MVA6_POPTR (Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa GN=POPTR_0014s04510g PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 5.3e-67
Identity = 126/153 (82.35%), Postives = 135/153 (88.24%), Query Frame = 1 

Query: 19  FHSFIRVSSRHLLSKCFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGY 78
           F SFIR          FEVKV+APE Y+KRDSGLIY D EVG GDCPKDGQQV FHYVGY
Sbjct: 66  FPSFIREG--------FEVKVVAPENYIKRDSGLIYRDFEVGEGDCPKDGQQVTFHYVGY 125

Query: 79  NESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTF 138
           NESGRRIDSTYLQGSPA+IR+GTNAL+PGFEEGIR MRPGGKRRII+PPELGPPVGPSTF
Sbjct: 126 NESGRRIDSTYLQGSPAKIRMGTNALIPGFEEGIRDMRPGGKRRIIVPPELGPPVGPSTF 185

Query: 139 FSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 172
           FSSKQFEVFDVELL+V+DCQRRTI FYSD+VCN
Sbjct: 186 FSSKQFEVFDVELLNVKDCQRRTIGFYSDVVCN 210

[Close]
BLAST of Cla021108 vs. TrEMBL
Match: U5FPF9_POPTR (Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa GN=POPTR_0014s04510g PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 5.3e-67
Identity = 126/153 (82.35%), Postives = 135/153 (88.24%), Query Frame = 1 

Query: 19  FHSFIRVSSRHLLSKCFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGY 78
           F SFIR          FEVKV+APE Y+KRDSGLIY D EVG GDCPKDGQQV FHYVGY
Sbjct: 114 FPSFIREG--------FEVKVVAPENYIKRDSGLIYRDFEVGEGDCPKDGQQVTFHYVGY 173

Query: 79  NESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTF 138
           NESGRRIDSTYLQGSPA+IR+GTNAL+PGFEEGIR MRPGGKRRII+PPELGPPVGPSTF
Sbjct: 174 NESGRRIDSTYLQGSPAKIRMGTNALIPGFEEGIRDMRPGGKRRIIVPPELGPPVGPSTF 233

Query: 139 FSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 172
           FSSKQFEVFDVELL+V+DCQRRTI FYSD+VCN
Sbjct: 234 FSSKQFEVFDVELLNVKDCQRRTIGFYSDVVCN 258

[Close]
BLAST of Cla021108 vs. NCBI nr
Match: gi|449431986|ref|XP_004133781.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis sativus])

HSP 1 Score: 281.6 bits (719), Expect = 9.4e-73
Identity = 138/153 (90.20%), Postives = 141/153 (92.16%), Query Frame = 1 

Query: 19  FHSFIRVSSRHLLSKCFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGY 78
           F SF+R          FEVKVIAPE+YVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGY
Sbjct: 116 FPSFVREG--------FEVKVIAPESYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGY 175

Query: 79  NESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTF 138
           NESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRR+IIPPELGPPVGPSTF
Sbjct: 176 NESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRMIIPPELGPPVGPSTF 235

Query: 139 FSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 172
           FSSKQFEVFDVELLSVQDCQRRTI FYSDIVCN
Sbjct: 236 FSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN 260

[Close]
BLAST of Cla021108 vs. NCBI nr
Match: gi|659074833|ref|XP_008437821.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis melo])

HSP 1 Score: 279.3 bits (713), Expect = 4.6e-72
Identity = 137/153 (89.54%), Postives = 140/153 (91.50%), Query Frame = 1 

Query: 19  FHSFIRVSSRHLLSKCFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGY 78
           F SF+R          FEVKVI PE+YVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGY
Sbjct: 116 FPSFVREG--------FEVKVITPESYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGY 175

Query: 79  NESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTF 138
           NESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTF
Sbjct: 176 NESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTF 235

Query: 139 FSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 172
           FSSKQFEVFDVELLSVQDCQRRTI FYSDIVC+
Sbjct: 236 FSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCS 260

[Close]
BLAST of Cla021108 vs. NCBI nr
Match: gi|743787805|ref|XP_011031882.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X1 [Populus euphratica])

HSP 1 Score: 262.3 bits (669), Expect = 5.9e-67
Identity = 127/153 (83.01%), Postives = 135/153 (88.24%), Query Frame = 1 

Query: 19  FHSFIRVSSRHLLSKCFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGY 78
           F SFIR          FEVKV+APE YVKRDSGLIY D EVG GDCPKDGQQV FHYVGY
Sbjct: 115 FPSFIREG--------FEVKVVAPENYVKRDSGLIYRDFEVGEGDCPKDGQQVTFHYVGY 174

Query: 79  NESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTF 138
           NESGRRIDSTYLQGSPA+IR+GTNAL+PGFEEGIR MRPGGKRRII+PPELGPPVGPSTF
Sbjct: 175 NESGRRIDSTYLQGSPAKIRMGTNALIPGFEEGIRDMRPGGKRRIIVPPELGPPVGPSTF 234

Query: 139 FSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 172
           FSSKQFEVFDVELL+V+DCQRRTI FYSD+VCN
Sbjct: 235 FSSKQFEVFDVELLNVKDCQRRTIGFYSDVVCN 259

[Close]
BLAST of Cla021108 vs. NCBI nr
Match: gi|743787809|ref|XP_011031892.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X2 [Populus euphratica])

HSP 1 Score: 262.3 bits (669), Expect = 5.9e-67
Identity = 127/153 (83.01%), Postives = 135/153 (88.24%), Query Frame = 1 

Query: 19  FHSFIRVSSRHLLSKCFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGY 78
           F SFIR          FEVKV+APE YVKRDSGLIY D EVG GDCPKDGQQV FHYVGY
Sbjct: 114 FPSFIREG--------FEVKVVAPENYVKRDSGLIYRDFEVGEGDCPKDGQQVTFHYVGY 173

Query: 79  NESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTF 138
           NESGRRIDSTYLQGSPA+IR+GTNAL+PGFEEGIR MRPGGKRRII+PPELGPPVGPSTF
Sbjct: 174 NESGRRIDSTYLQGSPAKIRMGTNALIPGFEEGIRDMRPGGKRRIIVPPELGPPVGPSTF 233

Query: 139 FSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 172
           FSSKQFEVFDVELL+V+DCQRRTI FYSD+VCN
Sbjct: 234 FSSKQFEVFDVELLNVKDCQRRTIGFYSDVVCN 258

[Close]
BLAST of Cla021108 vs. NCBI nr
Match: gi|743787812|ref|XP_011031901.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X3 [Populus euphratica])

HSP 1 Score: 262.3 bits (669), Expect = 5.9e-67
Identity = 127/153 (83.01%), Postives = 135/153 (88.24%), Query Frame = 1 

Query: 19  FHSFIRVSSRHLLSKCFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGY 78
           F SFIR          FEVKV+APE YVKRDSGLIY D EVG GDCPKDGQQV FHYVGY
Sbjct: 43  FPSFIREG--------FEVKVVAPENYVKRDSGLIYRDFEVGEGDCPKDGQQVTFHYVGY 102

Query: 79  NESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTF 138
           NESGRRIDSTYLQGSPA+IR+GTNAL+PGFEEGIR MRPGGKRRII+PPELGPPVGPSTF
Sbjct: 103 NESGRRIDSTYLQGSPAKIRMGTNALIPGFEEGIRDMRPGGKRRIIVPPELGPPVGPSTF 162

Query: 139 FSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 172
           FSSKQFEVFDVELL+V+DCQRRTI FYSD+VCN
Sbjct: 163 FSSKQFEVFDVELLNVKDCQRRTIGFYSDVVCN 187

The following BLAST results are available for this feature:
BLAST of Cla021108 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FK202_ARATH6.3e-6180.43Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thali... [more]
FKBA_ECOLI3.4e-1436.89FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli (strain K... [more]
FKBA_ECO573.4e-1436.89FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli O157:H7 G... [more]
FKBA_ECOL63.4e-1436.89FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli O6:H1 (st... [more]
FK171_ARATH8.3e-1329.65Peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic OS=Arabidopsis thali... [more]
BLAST of Cla021108 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5Q7_CUCSA6.5e-7390.20Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_3G118090 PE=4 SV=1[more]
U5FNZ4_POPTR5.3e-6782.35Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa GN=POPTR_0014s04510g ... [more]
U5FSF9_POPTR5.3e-6782.35Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa GN=POPTR_0014s04510g ... [more]
B9MVA6_POPTR5.3e-6782.35Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa GN=POPTR_0014s04510g ... [more]
U5FPF9_POPTR5.3e-6782.35Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa GN=POPTR_0014s04510g ... [more]
BLAST of Cla021108 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449431986|ref|XP_004133781.1|9.4e-7390.20PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis ... [more]
gi|659074833|ref|XP_008437821.1|4.6e-7289.54PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis ... [more]
gi|743787805|ref|XP_011031882.1|5.9e-6783.01PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X... [more]
gi|743787809|ref|XP_011031892.1|5.9e-6783.01PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X... [more]
gi|743787812|ref|XP_011031901.1|5.9e-6783.01PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001179PPIase_FKBP_dom
IPR023566PPIase_FKBP
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0009579 thylakoid
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016853 isomerase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU55223watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla021108Cla021108.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU55223WMU55223transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 65..130
score: 4.5
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROFILEPS50059FKBP_PPIASEcoord: 68..155
score: 17
IPR023566Peptidyl-prolyl cis-trans isomerase, FKBP-typePANTHERPTHR10516PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 35..171
score: 3.7
NoneNo IPR availableGENE3DG3DSA:3.10.50.40coord: 33..155
score: 3.8
NoneNo IPR availablePANTHERPTHR10516:SF178PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTICcoord: 35..171
score: 3.7
NoneNo IPR availableunknownSSF54534FKBP-likecoord: 32..155
score: 1.69