ClCG05G000410 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G000410
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Peptidyl-prolyl cis-trans isomerase
Location	CG_Chr05 : 548880 .. 553693 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATGATCTTAGTTAGAAAATTGAAGATAATGTCTTCGGAATAACGGGAAAACGGCCATGTCATAGCGTTTTCCGCCATTTTATTTGCAGAAGATATGCTTGTTACTTGCTCAACGCCTTCTCTTACCTCCGGCCATTCTATTTCTTGTAAGACCCTCTCCACTCCCTATCTTCTTCTCTCATATCTTCAATTTTGCGAGTCATTTGGGTTTTAGCCGCGATGAAATGTAAAGAGATTAATTATTAATATTTGCATTTTGGGTACTTTCTACTTTTGTATATCCACAATGAACTTTGCTCTTAATTGGGTTCTTTCCATGGAGTTTTGTCTTGATAGAACTCAGATTTCCAATGGGTTTTGGGAATTAGCTTAAGCGTCTAGATTCAACAGTAATTTATCGTAGTATCAGAATTAAGAATTCTCATGTTTGGACCTCTGAAATTTAATTTCCTCTCCAATTATATTGGCTTTCAGTTATTAGGTCTTTTTACGAATTTTCAAGAACACAAAATCTAACTTTTGAGTTCAGAAGATAAAGTGGCAATTAGACTGTTTTTCAATGCATGCCTCACTGAATTGGGTTGAATATTGTATTGGTTCATCTCTACCTGTTCCTTTGGTTTTATAAGTTTATTGACGCCCTCTGGCAGACGCGTTTTCAGGATGTGCAACAACATCAAGAGCTTTCATTACTCAAATCAAGCAAGTACATCGCTACTGCTCGTGTCATAGTTTCAATCACAGCAGGTTAGACTTTGAGTATTGGTTGATGATTGTAATTGCTGATTTGTATTTTATAGTGAAGAAGGTATCTTGTGAAGATAAGTGCTGACCATAAAATTTCCGTGCATGCTCAGCGGAGAGAATTCTAGTATATCATTATCCAATGAGAATTCCAGGCGAAAGATTCTCCTATTTTTCTTATCAACTACAGCTTTATTTCCAACTCGGCATTCTTCTGCCAAGACAAAGAGTAAGAATCCATATGATGAAAGACGCTTACTAGAGCAAAACAAACGAAGACAAAGAGAAAACAATGCACCTGATGACTTTCCAAGCTTTGTCAGAGAAGGTATGGATCATGCTGCTATTTCATAGCTTTATCAGGGTATCTTCAAGGCATTTGCTTTCTAAATGTAACTCTGATGTCTTTCCTGAAAAGAACAGAGAGTAAAATGTAAAATAAAGTCAAATGTATATAAAAAATTACAGATTTTCTAATGTGTGGCTCAGGTTTCGAGGTTAAGGTAATAGCACCAGAGACCTATGTTAAACGTGACTCTGGGCTCATATATTGGGATATCGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTTTTATTTTACAACTACAATATCTTTTCTTCAATTTTCTTACAGAATCAGGATTTATCTTTTAGTGTTGTTGTTCAAAGTGCCCCTATACTGTGAAATGAAGTATTAGCATTCTTATTAAGCCTTAACTTTGGCATCTGTCACATGTTTCTATCCTCAGACGATATCAAGGGTTAGAAGAGAGTTTAGCATATGCAGTTCAATATTGTTTGGCTTGCCCATTTGTTTGTCACATTTTAAGATTGGCACCTTAAAGATTATTCATGTAAGAAATCCTAGGAGGCTAAATGATACTTGGTGAAAATTCACTTATAATTCTCAACCGATTGTTGTTCCATTGATGACTACTTTGTATACGGATCTCAGAAGCTTAATAAAAATGCTATATGCACGTGCACCTTTTATGATAACAGCATGACTTAGAATTGGTTAACACAAGATGATTTTAATTCGGATACATAGTTTAGTAATCAGGTCTCTCTGAAAGACTAAGCTGAGTTTGAGGGGTGGAATTTCCAGGAACTTCAGAATGATCAATTGATCTCTGGAAATGTATGAATAATGTTTCTTGGATTCACCTGAATAACTGTAAGAATAAATCAAATGTTGTTGGTAAAAATAATTCACCAACCTTTATATAAACTACTGATTTTGTAATAAGTGATCAATATTTAATTTTTTGTTGAATGTTTTTGACATCAGTGGAGTTTTCTGGTGTACATTGTGACTGTGAAGGTCCTTTCAGGTGATCTTTCACTATGTCGGCTATAATGAATCTGGTCGTCGAATTGACAGCACATACTTACAGGGTTCTCCTGCCAGAATCCGTGTGGGCACTAATGCGTTGGTCCCAGGTAGTTAAATTACGCCCCATCACCACACACACCCACACAAAAAAGGGAATAAAACACTCACCAATCTTGTAAAATCAAGAAGAGATTGACTTACAGTTGAAAATAATCAGATAGCATCTGAAAGAGAAATATTGTAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAGAGGAGAATAATAATTCCACCAGAACTTGGACCACCTGTGAGTTCTCAAGCATATGATTATTGCTTCAGTTTTATACCAACATCTTAAATTTCTTGTAACTGATTGTTATATATGCAGCAATTTTTAATCAAGCAAGGAAAGACCACCCATAATGATCTCCCATTTGCTGCAGTTGTATTTGCCTGTCATATAATTCATCTCCAGCTAGACAATCCTCTATCTTTTACCATGAGATTGTTTGTTTATATCAGTATAGAAAATTAAACGACGTTTTCTTGCTTAGCAGAAATCTAGGAACTCAATAGGCAAGAGCACACTAATATTGGAGAAGAACATACTAACTTGGGGCAGATTAGATAGTCGCTCACTCAAGATAAGGGAGTAATATAATGGAGGAACTCCAGCAGGCATTGGCAAATAAGTTGAACTAAATAAGAGGACAATAATAGTAAACGTACAACAGGTGAAAGGAAATCAACCCAAGAAGCAATAAGATTACAATAATTTCCTCAAACAAGATTTAATAAAAAAAAGAAAAGAAACAATAGTTGCAAAAAGTTATTATGGAAAAAAAAACCTTCAAAGTATAGGAGTAATTGATTGTGAAAACTGAAAAGCCTCTGAAATACACCCAGAAAACCCTCAAAACTTGGTACTCTCTAAAACTTCCCCCCATTTTTTACAATATAAGGTTCTGTGTTTTCTTTCAGAGCGAATTTCCAGAGAATGGACCTTACTAATCCAGAAAACCTTAGTTCTATATTTAAACCAGTGACCACAGAGAAGATATTCTAAAAATCTCGAAGCTTGTTGGAGAAGCACTGCAATGGGTATAATTCCTTTCGGAGTTTATTTGAAGATCTCTTCATGTAGGGGCATTGGAAAAACAGGCTCTCTGGATCTTCATTCTCAGAAGACATACTAATATGGAGAAAGGCCAAAGAAAGGAATGACCTTCCAATCAGTCCTGTTGACTCCTCCTAATGTTAAGGGCCAGATGAAGAATTCAATATCTTTAGGATTTCTTTCTAAATTGAAAATCATTGGGGATAGCTTTGGGTCAGACCACTGAGGTTGCTATTCTTGATTGACAAAACTACCATTTAATGAATTAAAAAAAAAATCTTGTTATTCAGAGATCCACACATCTTCCCTAGAATAAATATTGTCACCCTTTCCTGCCTTTATAGGAAAGTAAAGTTTCACGAAGATGGTTATTCGATAATGAGTCTCCTATGACTTTTTTACTTTGGACCTCTTCTTTTGGCACAAGCAATATCTCTTAAGAACCTCATACTTGCAACCTCATATTTGCATCGGTAGAGTTCTTTAATGCACTCTCTTGTGAAAAAATTTGTACCATTTTGATGCAACAGCCACTATTTTCTGCATCAAATTATCGTAAACCTAAACCTCCTGAGAGCAGATGAAGAACTGAAGTCCATTGAATTAAGTGAATTCCTCCTTCAGTACATAACCTCCTTTGCAGTCATACTCCTTGGGTACATCCTTTTTGGAACAAATGAAACTTCTTTTTAAATACATATAATCTGACGTATCTTTCTCGCAAGTAGTACGAATGGGAAGTTTGTGATTAAATTCAAAGAAACCTGCAGATTGGGCATGATACGAGAGCATATTGCCCTGTCTTAGAGCCACAAACTCGCTCTTTGTCCATTCTTATCTGCCAGCCTCTGAAGCTGGATTCTGGTAGTTTTCTGCTCCACTTATTTTGTGCATTTCTTCCATGCAAGTAAGACAAAGGAGGAATTCTGGATCTCAGTTATCTAATCAGATATGCAGATAAACTTTATTGTTTTGTCTTGGAGTACAATTGTCTTCACCGTTCCCATATCTTGAAAAACTTATGGATACCCATGTCTTACTGCTTTAAGCTGAAAAGGCAGAATGCTCGCAGCAATGTTCACTTGTCTGCTTACCTTGGTGGTCACCATTTTTTATATTTCTGTGACTAATGTGATATCTGATGATTTATCTCAATTGATTTTGACTTTTGATTATCTACAGGTGGGGCCTTCCACATTTTTCAGCTCAAAGCAGTTTGAAGTCTTTGATGTGGAACTGTTAAGCGTCCAGGATTGTCAGAGGAGGACAATAGCCTTTTACTCTGATATTGTTTGCAACTAGAAATTGAAGGTTGTCTTTTTGAGGTACAAGGATCTTTGAGATGAATCAACCTAAGAATGTCCATACTGCTCTATGTATATGCCGAACCTTTTGGAAAATAACCATCAATTCCTCTCCGCCCCCCACCCCAAGTGAGATGTTCTTACAGTGATTGATCATTAGATTAAAGATCAGATTACCAAGTTGCATGTTTTTCTCCCTCTCTCTCACCTTCTGGATAAGATCTCTGACCCGACCTTGGAACACAATCATAACTTTGCTTATCTACCATTTGCATTGTAGCTATTCAC

mRNA sequence

ATATGATCTTAGTTAGAAAATTGAAGATAATGTCTTCGGAATAACGGGAAAACGGCCATGTCATAGCGTTTTCCGCCATTTTATTTGCAGAAGATATGCTTGTTACTTGCTCAACGCCTTCTCTTACCTCCGGCCATTCTATTTCTTACGCGTTTTCAGGATGTGCAACAACATCAAGAGCTTTCATTACTCAAATCAAGCAAGTACATCGCTACTGCTCGTGTCATAGTTTCAATCACAGCAGAGAATTCTAGTATATCATTATCCAATGAGAATTCCAGGCGAAAGATTCTCCTATTTTTCTTATCAACTACAGCTTTATTTCCAACTCGGCATTCTTCTGCCAAGACAAAGAGTAAGAATCCATATGATGAAAGACGCTTACTAGAGCAAAACAAACGAAGACAAAGAGAAAACAATGCACCTGATGACTTTCCAAGCTTTGTCAGAGAAGGTTTCGAGGTTAAGGTAATAGCACCAGAGACCTATGTTAAACGTGACTCTGGGCTCATATATTGGGATATCGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTGATCTTTCACTATGTCGGCTATAATGAATCTGGTCGTCGAATTGACAGCACATACTTACAGGGTTCTCCTGCCAGAATCCGTGTGGGCACTAATGCGTTGGTCCCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAGAGGAGAATAATAATTCCACCAGAACTTGGACCACCTGTGGGGCCTTCCACATTTTTCAGCTCAAAGCAGTTTGAAGTCTTTGATGTGGAACTGTTAAGCGTCCAGGATTGTCAGAGGAGGACAATAGCCTTTTACTCTGATATTGTTTGCAACTAGAAATTGAAGGTTGTCTTTTTGAGGTACAAGGATCTTTGAGATGAATCAACCTAAGAATGTCCATACTGCTCTATGTATATGCCGAACCTTTTGGAAAATAACCATCAATTCCTCTCCGCCCCCCACCCCAAGTGAGATGTTCTTACAGTGATTGATCATTAGATTAAAGATCAGATTACCAAGTTGCATGTTTTTCTCCCTCTCTCTCACCTTCTGGATAAGATCTCTGACCCGACCTTGGAACACAATCATAACTTTGCTTATCTACCATTTGCATTGTAGCTATTCAC

Coding sequence (CDS)

ATGAGACCAGGGGGAAAGAGGAGAATAATAATTCCACCAGAACTTGGACCACCTGTGGGGCCTTCCACATTTTTCAGCTCAAAGCAGTTTGAAGTCTTTGATGTGGAACTGTTAAGCGTCCAGGATTGTCAGAGGAGGACAATAGCCTTTTACTCTGATATTGTTTGCAACTAG

Protein sequence

MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN

Homology

[Close]

BLAST of ClCG05G000410 vs. Swiss-Prot
Match: FK202_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana GN=FKBP20-2 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 3.3e-22
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 1


Query: 1   MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRT-IAFYSDIVCN 58
           M+PGG+RRIIIPPELGPPVGPSTFFSSKQFEVFDVELLS+Q+C+RRT I FYSD+ C+
Sbjct: 185 MKPGGRRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIIGFYSDVTCS 242

[Close]

BLAST of ClCG05G000410 vs. TrEMBL
Match: A0A067JY72_JATCU (Peptidyl-prolyl cis-trans isomerase OS=Jatropha curcas GN=JCGZ_14598 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.9e-24
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 1


Query: 1   MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 58
           MRPGGKRRIIIPPELGPPVGPSTFFS+KQFEVFDVELLSVQDCQRRTIAFYSD+VCN
Sbjct: 203 MRPGGKRRIIIPPELGPPVGPSTFFSAKQFEVFDVELLSVQDCQRRTIAFYSDVVCN 259

[Close]

BLAST of ClCG05G000410 vs. TrEMBL
Match: A0A0A0L5Q7_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_3G118090 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 4.2e-24
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 1


Query: 1   MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 58
           MRPGGKRR+IIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTI FYSDIVCN
Sbjct: 204 MRPGGKRRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN 260

[Close]

BLAST of ClCG05G000410 vs. TrEMBL
Match: A0A067H3P5_CITSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis GN=CISIN_1g025317mg PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 5.4e-24
Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = 1


Query: 1   MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 58
           MRPGGKRRIIIPPELGPPVGPSTFFS+KQFEVFDVELLSVQDCQRRTI FYSD+VCN
Sbjct: 198 MRPGGKRRIIIPPELGPPVGPSTFFSAKQFEVFDVELLSVQDCQRRTIGFYSDVVCN 254

[Close]

BLAST of ClCG05G000410 vs. TrEMBL
Match: A0A0B0MIZ4_GOSAR (Peptidyl-prolyl cis-trans isomerase OS=Gossypium arboreum GN=F383_17647 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 5.4e-24
Identity = 53/57 (92.98%), Postives = 57/57 (100.00%), Query Frame = 1


Query: 1   MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 58
           MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFD+ELLS+Q+CQRRTIAFYSD+VCN
Sbjct: 199 MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDIELLSIQNCQRRTIAFYSDVVCN 255

[Close]

BLAST of ClCG05G000410 vs. TrEMBL
Match: A0A0D2R055_GOSRA (Peptidyl-prolyl cis-trans isomerase OS=Gossypium raimondii GN=B456_004G071600 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 5.4e-24
Identity = 53/57 (92.98%), Postives = 57/57 (100.00%), Query Frame = 1


Query: 1   MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 58
           MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFD+ELLS+Q+CQRRTIAFYSD+VCN
Sbjct: 197 MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDIELLSIQNCQRRTIAFYSDVVCN 253

[Close]

BLAST of ClCG05G000410 vs. TAIR10
Match: AT3G60370.1 (AT3G60370.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-23
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 1


Query: 1   MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRT-IAFYSDIVCN 58
           M+PGG+RRIIIPPELGPPVGPSTFFSSKQFEVFDVELLS+Q+C+RRT I FYSD+ C+
Sbjct: 185 MKPGGRRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIIGFYSDVTCS 242

[Close]

BLAST of ClCG05G000410 vs. NCBI nr
Match: gi|1000982538|ref|XP_015584498.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X4 [Ricinus communis])

HSP 1 Score: 119.4 bits (298), Expect = 2.0e-24
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 1


Query: 1   MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 58
           MRPGGKRR+IIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSD+VCN
Sbjct: 206 MRPGGKRRLIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDVVCN 262

[Close]

BLAST of ClCG05G000410 vs. NCBI nr
Match: gi|1000982535|ref|XP_015584496.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X3 [Ricinus communis])

HSP 1 Score: 119.4 bits (298), Expect = 2.0e-24
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 1


Query: 1   MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 58
           MRPGGKRR+IIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSD+VCN
Sbjct: 212 MRPGGKRRLIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDVVCN 268

[Close]

BLAST of ClCG05G000410 vs. NCBI nr
Match: gi|1000982533|ref|XP_015584495.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X2 [Ricinus communis])

HSP 1 Score: 119.4 bits (298), Expect = 2.0e-24
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 1


Query: 1   MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 58
           MRPGGKRR+IIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSD+VCN
Sbjct: 217 MRPGGKRRLIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDVVCN 273

[Close]

BLAST of ClCG05G000410 vs. NCBI nr
Match: gi|1000982530|ref|XP_015584494.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X1 [Ricinus communis])

HSP 1 Score: 119.4 bits (298), Expect = 2.0e-24
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 1


Query: 1   MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 58
           MRPGGKRR+IIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSD+VCN
Sbjct: 218 MRPGGKRRLIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDVVCN 274

[Close]

BLAST of ClCG05G000410 vs. NCBI nr
Match: gi|1000982540|ref|XP_015584499.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X5 [Ricinus communis])

HSP 1 Score: 119.4 bits (298), Expect = 2.0e-24
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 1


Query: 1   MRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 58
           MRPGGKRR+IIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSD+VCN
Sbjct: 202 MRPGGKRRLIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDVVCN 258

The following BLAST results are available for this feature:

BLAST of ClCG05G000410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FK202_ARATH	3.3e-22	82.76	Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thali...	[more]

BLAST of ClCG05G000410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067JY72_JATCU	1.9e-24	96.49	Peptidyl-prolyl cis-trans isomerase OS=Jatropha curcas GN=JCGZ_14598 PE=4 SV=1	[more]
A0A0A0L5Q7_CUCSA	4.2e-24	96.49	Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_3G118090 PE=4 SV=1	[more]
A0A067H3P5_CITSI	5.4e-24	94.74	Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis GN=CISIN_1g025317mg PE=4 ...	[more]
A0A0B0MIZ4_GOSAR	5.4e-24	92.98	Peptidyl-prolyl cis-trans isomerase OS=Gossypium arboreum GN=F383_17647 PE=4 SV=...	[more]
A0A0D2R055_GOSRA	5.4e-24	92.98	Peptidyl-prolyl cis-trans isomerase OS=Gossypium raimondii GN=B456_004G071600 PE...	[more]

BLAST of ClCG05G000410 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60370.1	1.8e-23	82.76	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]

BLAST of ClCG05G000410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1000982538\|ref\|XP_015584498.1\|	2.0e-24	96.49	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X...	[more]
gi\|1000982535\|ref\|XP_015584496.1\|	2.0e-24	96.49	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X...	[more]
gi\|1000982533\|ref\|XP_015584495.1\|	2.0e-24	96.49	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X...	[more]
gi\|1000982530\|ref\|XP_015584494.1\|	2.0e-24	96.49	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X...	[more]
gi\|1000982540\|ref\|XP_015584499.1\|	2.0e-24	96.49	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023566	PPIase_FKBP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G000410.1	ClCG05G000410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023566	Peptidyl-prolyl cis-trans isomerase, FKBP-type	PANTHER	PTHR10516	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 1..57 score: 3.4
None	No IPR available	GENE3D	G3DSA:3.10.50.40		coord: 1..41 score: 1.
None	No IPR available	PANTHER	PTHR10516:SF178	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC	coord: 1..57 score: 3.4
None	No IPR available	unknown	SSF54534	FKBP-like	coord: 1..43 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G000410	Csa3G118090	Cucumber (Chinese Long) v2	cuwcgB222
ClCG05G000410	MELO3C005979	Melon (DHL92) v3.5.1	mewcgB427
ClCG05G000410	Cla021108	Watermelon (97103) v1	wcgwmB286
ClCG05G000410	Cla97C05G080380	Watermelon (97103) v2	wcgwmbB229
ClCG05G000410	CSPI03G07440	Wild cucumber (PI 183967)	cpiwcgB226
ClCG05G000410	Cucsa.259700	Cucumber (Gy14) v1	cgywcgB451
ClCG05G000410	CmaCh14G021450	Cucurbita maxima (Rimu)	cmawcgB233
ClCG05G000410	CmoCh14G022120	Cucurbita moschata (Rifu)	cmowcgB219
ClCG05G000410	Cp4.1LG03g15700	Cucurbita pepo (Zucchini)	cpewcgB559
ClCG05G000410	MELO3C005979.2	Melon (DHL92) v3.6.1	medwcgB416
ClCG05G000410	Carg17665	Silver-seed gourd	carwcgB0128
ClCG05G000410	CsaV3_3G007570	Cucumber (Chinese Long) v3	cucwcgB225

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G000410	Cucurbita maxima (Rimu)	cmawcgB006
ClCG05G000410	Cucurbita maxima (Rimu)	cmawcgB738
ClCG05G000410	Cucurbita maxima (Rimu)	cmawcgB742
ClCG05G000410	Cucurbita moschata (Rifu)	cmowcgB743
ClCG05G000410	Cucurbita pepo (Zucchini)	cpewcgB787
ClCG05G000410	Bottle gourd (USVL1VR-Ls)	lsiwcgB335
ClCG05G000410	Cucumber (Gy14) v2	cgybwcgB203
ClCG05G000410	Wax gourd	wcgwgoB439