Carg17665 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17665
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	FKBP-like peptidyl-prolyl cis-trans isomerase family protein
Location	Cucurbita_argyrosperma_scaffold_119 : 722383 .. 725547 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATGGTAAAACTAATTATCAATTGATCTCTGGAAATTTGTATGAAAAATGCTTCTTGTTTCACCTGTCTAATTGTTCAACAATTCAAATGTTGGTGGTAAAAATAATTCACCTACCTATAACAAACAGCCGATTTTGCAATGAGTGATTAATATTTAGTTTTATGTTGCATGGTTTTGACATTAGTGGAATTTCCTGGTGTACATTGTGACTCTGAAGGCCCTTTCAGGTGACTTTTCACTATGTTGGATACAATGAGTCTGGTCGTCGAATTGACAGCACATACTTACAGGGCTCTCCCGCCAGAATCCGTGTGGGCACTAATGCGTTGGTCCCAGGTAGTTAAGCTCCCCCCCCCCCCCCCCCCACACACACCACACACACACACACAAAAGAGTGAAAAAAAAACGCTCACCAATCTTGTAAAAGCAAGAAGAGATTGACTTACGGTTGAAAATAATCACGTAGCATCTGAAAGAGAAATATTGTAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAGAGGAGAATAATAATTCCACCAGAACTTGGACCACCTGTGAGTTCTCAAGCTGCTTCAATTTTATATAAGCATCTTTAGTTTTTTATAACTGATTGTTATATATGCTGCAATTTTTAGTTATGTAAGGAAAGACCACCCATAATTTGACCTCCCATTGCTAATTTTCCCTTCATTTCATCTCCAGCTAGACAAAGCTCTATCTTTTACCATGAGATGGCTTATATTAGTACACAACAAATTAAAAAAGGTTTTCTTGCTTAGCAGAAAACTTGGTTCTCGATAGATAAGCGCTATTGGAGAAGATTATATACTAGGTTGGGGCAAGTTAGGTAGTCGCCTACTCAAGATAAAGGAGCAATGTAATAAAGGAACTCCAGCAAGCATTGGCCAAAAAGTTGCACAAAATAAGAGGACAAAAGCAAACGTCCAACAGGTGACAGGAAATCAACCCAAGAAGGCTTATTACAAAAATTTCCTCAAACCAGCTTTAATAGAATGAATCTTACTAATCCAGAAAACCTCGGTTCTATATTTAAACCAGTGACCACAAAGTAGATGTTCTTAATAATTCCCAAGCCTCTTGGAGAAGCACTGCAATAGGTAAAATTCCTTTCGGAGTTTATTAAGAAAATCTTTTCATGTAGGGACATTGGGAAAACAGACCTTCTAGATCTTTATTCTCACAATTGCAATGGACACACTAATATGGACGAGGGCAAAATAAAAGAATGACCTTCTGAACCCAATCAGTCCTGTTGACTCCACCTAATGCTAAGGGCCTTTCTTTCTAAATAGTAAATAATTTGGGACAGCTTTGGATCAGAACACTGATTTGCTAGTTAGACGGCTGAGTTGAATCATGCATGACAAGATGCCCGAACCATCAACTATTAGATCAAGAACCTTTACTGTTGCTTGGTGAGGAATCCCCAACACGTTTTTGAGAAATTGGCTAGCTCAATTATCTCTCTATCAAACGAACAATCTTCTATCCTGCACATGTGAACCACCTTTGTTCGCCTTCCAGCTATTCTTGGTTGACAAAACTACGTTAGTGGCCAACTAATGAAGACTAGAGAAAAAAATCATCGAGCTATTCAGAGATCCACACTTCTTCCCAAGAAGAAATATTGTCACACTTTCCTGCCTTCAGAGAAAAGGAAAGTTCATAAGATCTCTTCTTTTGGCAATAAACCAAGCTCCCTTAAGAACCTCATACCTGCAACCTCGTATTTGCAACAGTAAAGTTCTTTAACGCATTCACTCTTAAAATTTTTTGTACCCATTTAGATGCAATAGCCACAAATTTCTGCATAAAATTTTCACCAACCTAAGCCTCCAGCAATCAGATGAAGAACTACTGAACTCCATTGAATTAAGTGAATTCCTCCCTCAGTACATAACCTCCTTGCATAGTCATTTATAGTTCTCTCTCATGTTCCCTTGGCTACATCCTTCTTGGAACGAAGGAAATTTCTTCTGAAATATATACAAGTTAACGCTCATTCTTCTTGCGAGTAATATGAATAGGAAGCTTGTGATTAAATTCAAAGACAACTTCAGAATGGGCATGATACGAGAGAATATTGCCTTGTCGTAGAGCCACAAACTCGCCTTTTTGTCCTTTCTTATCTGCCAGCCTCTGAAACTGGATTCTGATAGTTTTCTGCTCCACTTATTTTGTGCATTGCTTCCATGCAAGTAAGACACAGGAGGAATTGGATCCTGGTAGTTTTCTGCTCCACTTATTTTGTGCATTTCTTCAATGCAAGTAAGACAGAGGAGGAATTCTGGATTTCTGTTATCTAATCAGAGATGCGGATAGACTTCATTGATTTGTCTTGGAGTAAAATTGTCTTCACAGTTCCCATATCTTGAAAAACTTATGGATGGATGGATACCCATGTCTTAATGATTTAAGTCGAGAAGGCAGAATGCTCGCATTAATGTTCACTTGTTTGCTTACCTCGATGGTCTCCATTTTTTTTTTTTTTTTTTCTGCGACTGATGTGATGTCTGATGATTTATCTCAATTGATTCGACTTTTTATTATCTTCAGGTGGGGCCTTCCACATTTTTCAGCTCGAAGCAGTTTGAAGTTTTTGATGTGGAACTGTTAAACGTCAAGGATTGTCAGAGGAGGACAATAGCCTTTTACTCTGATATTGTTTGCAACTAGGAGTTTAAGATTGTCTTTTCTGAGGTACATGGATCTTTGAGACGAATCACCCTAAGAACTCCATACCGCTCGATGTATATGCTGAATTTATTGCCTTCTCTGCTGAGAAACCTCTTAGAAAATAAGCATTAACTCCTATCCTCCCCCCAACGCAAATGAGATGTTTTTACAGTGATTGCATTAGATTAAAGATCAGATCACCAAGTTGCACGGACTTGTTCTATTTGTCACCTTCTCCCGATGAGTAGGATAGATCTCCTGAGCCGGCCCTGGAGCACCATCATGGCTTTGACTTTGCTTATCAACCATTGCAAGTAATTTGAACCCCTCTTCACGTGTATAAAACACAGCTTATTTAAATTATTATCTTAAAAATTATTGGTGTCGATCCCATTCTATTATTGTCGAACTGAAAAAAGAGTTTATTGTCTTACATAACTCGATTATAAA

mRNA sequence

ATGAAGATGGTGACTTTTCACTATGTTGGATACAATGAGTCTGGTCGTCGAATTGACAGCACATACTTACAGGGCTCTCCCGCCAGAATCCGTGTGGGCACTAATGCGTTGGTCCCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAGAGGAGAATAATAATTCCACCAGAACTTGGACCACCTGTGGGGCCTTCCACATTTTTCAGCTCGAAGCAGTTTGAAGTTTTTGATGTGGAACTGTTAAACGTCAAGGATTGTCAGAGGAGGACAATAGCCTTTTACTCTGATATTGTTTGCAACTAGGAGTTTAAGATTGTCTTTTCTGAGGTACATGGATCTTTGAGACGAATCACCCTAAGAACTCCATACCGCTCGATGTATATGCTGAATTTATTGCCTTCTCTGCTGAGAAACCTCTTAGAAAATAAGCATTAACTCCTATCCTCCCCCCAACGCAAATGAGATGTTTTTACAGTGATTGCATTAGATTAAAGATCAGATCACCAAGTTGCACGGACTTGTTCTATTTGTCACCTTCTCCCGATGAGTAGGATAGATCTCCTGAGCCGGCCCTGGAGCACCATCATGGCTTTGACTTTGCTTATCAACCATTGCAAGTAATTTGAACCCCTCTTCACGTGTATAAAACACAGCTTATTTAAATTATTATCTTAAAAATTATTGGTGTCGATCCCATTCTATTATTGTCGAACTGAAAAAAGAGTTTATTGTCTTACATAACTCGATTATAAA

Coding sequence (CDS)

ATGAAGATGGTGACTTTTCACTATGTTGGATACAATGAGTCTGGTCGTCGAATTGACAGCACATACTTACAGGGCTCTCCCGCCAGAATCCGTGTGGGCACTAATGCGTTGGTCCCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAGAGGAGAATAATAATTCCACCAGAACTTGGACCACCTGTGGGGCCTTCCACATTTTTCAGCTCGAAGCAGTTTGAAGTTTTTGATGTGGAACTGTTAAACGTCAAGGATTGTCAGAGGAGGACAATAGCCTTTTACTCTGATATTGTTTGCAACTAG

Protein sequence

MKMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN

Homology

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BLAST of Carg17665 vs. NCBI nr
Match: XP_022924401.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 213.4 bits (542), Expect = 3.7e-52
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           + VTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE
Sbjct: 157 QQVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 216

Query: 62  LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN 105
           LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN
Sbjct: 217 LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN 259

[Close]

BLAST of Carg17665 vs. NCBI nr
Match: XP_022979534.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 213.4 bits (542), Expect = 3.7e-52
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           + VTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE
Sbjct: 157 QQVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 216

Query: 62  LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN 105
           LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN
Sbjct: 217 LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN 259

[Close]

BLAST of Carg17665 vs. NCBI nr
Match: XP_023529045.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.4 bits (542), Expect = 3.7e-52
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           + VTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE
Sbjct: 157 QQVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 216

Query: 62  LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN 105
           LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN
Sbjct: 217 LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN 259

[Close]

BLAST of Carg17665 vs. NCBI nr
Match: XP_022153538.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 208.4 bits (529), Expect = 1.2e-50
Identity = 97/103 (94.17%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           + VTFHY+GYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGM+PGGKRRIIIPPE
Sbjct: 157 QQVTFHYIGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMKPGGKRRIIIPPE 216

Query: 62  LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN 105
           LGPPVGPSTFFSSKQFEVFDVELL+V+DCQRRTIAFYSDIVCN
Sbjct: 217 LGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 259

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BLAST of Carg17665 vs. NCBI nr
Match: XP_022153545.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X2 [Momordica charantia] >XP_022153554.1 peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 208.4 bits (529), Expect = 1.2e-50
Identity = 97/103 (94.17%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           + VTFHY+GYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGM+PGGKRRIIIPPE
Sbjct: 127 QQVTFHYIGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMKPGGKRRIIIPPE 186

Query: 62  LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN 105
           LGPPVGPSTFFSSKQFEVFDVELL+V+DCQRRTIAFYSDIVCN
Sbjct: 187 LGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIAFYSDIVCN 229

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BLAST of Carg17665 vs. TAIR10
Match: AT3G60370.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 186.4 bits (472), Expect = 8.8e-48
Identity = 85/104 (81.73%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           + VTFHY+GYNESGRRIDSTY+QGSPARIR+GTNALVPGFE GIR M+PGG+RRIIIPPE
Sbjct: 139 QQVTFHYIGYNESGRRIDSTYIQGSPARIRMGTNALVPGFEMGIRDMKPGGRRRIIIPPE 198

Query: 62  LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRT-IAFYSDIVCN 105
           LGPPVGPSTFFSSKQFEVFDVELL++++C+RRT I FYSD+ C+
Sbjct: 199 LGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIIGFYSDVTCS 242

[Close]

BLAST of Carg17665 vs. TAIR10
Match: AT4G25340.1 (FK506 BINDING PROTEIN 53)

HSP 1 Score: 60.8 bits (146), Expect = 5.6e-10
Identity = 30/88 (34.09%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           K V+  Y+G  +   +I  + +  SP + R+G  +++ G++ G+ GMR G KR++ IPP 
Sbjct: 390 KTVSVRYIGKLQKNGKIFDSNIGKSPFKFRLGIGSVIKGWDVGVNGMRVGDKRKLTIPPS 449

Query: 62  LGPPV-GPSTFFSSKQFEVFDVELLNVK 89
           +G  V G         +  FDVEL+NV+
Sbjct: 450 MGYGVKGAGGQIPPNSWLTFDVELINVQ 477

[Close]

BLAST of Carg17665 vs. TAIR10
Match: AT5G05420.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 60.8 bits (146), Expect = 5.6e-10
Identity = 31/87 (35.63%), Postives = 47/87 (54.02%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           K V+ HY G  +   +I  + +  S  + R+    ++ G + G+ GM  GGKR++ IPPE
Sbjct: 57  KRVSVHYTGKLQGNGKIFDSTVGKSRYKFRLDAGKVIKGLDVGLNGMLVGGKRKLTIPPE 116

Query: 62  LGPPVGPSTFFSSKQFEVFDVELLNVK 89
           +G     +       + VFDVELLNVK
Sbjct: 117 MGYGAEGAGSIPPDSWLVFDVELLNVK 143

[Close]

BLAST of Carg17665 vs. TAIR10
Match: AT5G45680.1 (FK506-binding protein 13)

HSP 1 Score: 57.4 bits (137), Expect = 6.2e-09
Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRG------MRPGGKRR 61
           +++  HYVG  E+G+  DS+Y +G P   R+G   ++ G+++GI G      M  GGKR 
Sbjct: 110 QLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRT 169

Query: 62  IIIPPEL 63
           + IPPEL
Sbjct: 170 LRIPPEL 176

[Close]

BLAST of Carg17665 vs. TAIR10
Match: AT2G43560.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.2e-07
Identity = 27/64 (42.19%), Postives = 37/64 (57.81%), Query Frame = 0


Query: 4   VTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELG 63
           V  +YV    SG+  DS+  +G P   RVG+  ++ G +EGI  M+ GGKRR+ IP  L 
Sbjct: 127 VAANYVAMVPSGQIFDSSLEKGLPYLFRVGSGQVIKGLDEGILSMKAGGKRRLYIPGPLA 186

Query: 64  PPVG 68
            P G
Sbjct: 187 FPKG 190

[Close]

BLAST of Carg17665 vs. Swiss-Prot
Match: sp|Q0WRJ7|FK202_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP20-2 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.6e-46
Identity = 85/104 (81.73%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           + VTFHY+GYNESGRRIDSTY+QGSPARIR+GTNALVPGFE GIR M+PGG+RRIIIPPE
Sbjct: 139 QQVTFHYIGYNESGRRIDSTYIQGSPARIRMGTNALVPGFEMGIRDMKPGGRRRIIIPPE 198

Query: 62  LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRT-IAFYSDIVCN 105
           LGPPVGPSTFFSSKQFEVFDVELL++++C+RRT I FYSD+ C+
Sbjct: 199 LGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIIGFYSDVTCS 242

[Close]

BLAST of Carg17665 vs. Swiss-Prot
Match: sp|P56989|FKBP_NEIMA (FK506-binding protein OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) OX=122587 GN=fbp PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.3e-10
Identity = 32/87 (36.78%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           K +T HY G+ E+G + DS+  +  P  I +G   ++ G++EG  GM+ GGKR++ IP E
Sbjct: 21  KEITVHYTGWLENGTKFDSSLDRRQPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSE 80

Query: 62  LGPPV-GPSTFFSSKQFEVFDVELLNV 88
           +G    G           +F+VELL V
Sbjct: 81  MGYGARGAGGVIPPHATLIFEVELLKV 107

[Close]

BLAST of Carg17665 vs. Swiss-Prot
Match: sp|P0A0W2|FKBP_NEIMB (FK506-binding protein OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=fbp PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.3e-10
Identity = 32/87 (36.78%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           K +T HY G+ E+G + DS+  +  P  I +G   ++ G++EG  GM+ GGKR++ IP E
Sbjct: 21  KEITVHYTGWLENGTKFDSSLDRRQPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSE 80

Query: 62  LGPPV-GPSTFFSSKQFEVFDVELLNV 88
           +G    G           +F+VELL V
Sbjct: 81  MGYGAHGAGGVIPPHATLIFEVELLKV 107

[Close]

BLAST of Carg17665 vs. Swiss-Prot
Match: sp|P0A0W3|FKBP_NEIMC (FK506-binding protein OS=Neisseria meningitidis serogroup C OX=135720 GN=fbp PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.0e-10
Identity = 32/87 (36.78%), Postives = 48/87 (55.17%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           K +T HY G+ E G + DS+  +  P  I +G   ++ G++EG  GM+ GGKR++ IP E
Sbjct: 21  KEITVHYTGWLEDGTKFDSSLDRRQPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSE 80

Query: 62  LGPPV-GPSTFFSSKQFEVFDVELLNV 88
           +G    G           +F+VELL V
Sbjct: 81  MGYGAHGAGGVIPPHATLIFEVELLKV 107

[Close]

BLAST of Carg17665 vs. Swiss-Prot
Match: sp|Q9FLB3|FK153_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP15-3 OS=Arabidopsis thaliana OX=3702 GN=FKBP15-3 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-08
Identity = 31/87 (35.63%), Postives = 47/87 (54.02%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           K V+ HY G  +   +I  + +  S  + R+    ++ G + G+ GM  GGKR++ IPPE
Sbjct: 57  KRVSVHYTGKLQGNGKIFDSTVGKSRYKFRLDAGKVIKGLDVGLNGMLVGGKRKLTIPPE 116

Query: 62  LGPPVGPSTFFSSKQFEVFDVELLNVK 89
           +G     +       + VFDVELLNVK
Sbjct: 117 MGYGAEGAGSIPPDSWLVFDVELLNVK 143

[Close]

BLAST of Carg17665 vs. TrEMBL
Match: tr|U5FNZ4|U5FNZ4_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G045600v3 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.1e-50
Identity = 94/103 (91.26%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           + VTFHYVGYNESGRRIDSTYLQGSPA+IR+GTNAL+PGFEEGIR MRPGGKRRII+PPE
Sbjct: 112 QQVTFHYVGYNESGRRIDSTYLQGSPAKIRMGTNALIPGFEEGIRDMRPGGKRRIIVPPE 171

Query: 62  LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN 105
           LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTI FYSD+VCN
Sbjct: 172 LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIGFYSDVVCN 214

[Close]

BLAST of Carg17665 vs. TrEMBL
Match: tr|U5FPF9|U5FPF9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G045600v3 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.1e-50
Identity = 94/103 (91.26%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           + VTFHYVGYNESGRRIDSTYLQGSPA+IR+GTNAL+PGFEEGIR MRPGGKRRII+PPE
Sbjct: 156 QQVTFHYVGYNESGRRIDSTYLQGSPAKIRMGTNALIPGFEEGIRDMRPGGKRRIIVPPE 215

Query: 62  LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN 105
           LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTI FYSD+VCN
Sbjct: 216 LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIGFYSDVVCN 258

[Close]

BLAST of Carg17665 vs. TrEMBL
Match: tr|U5FSF9|U5FSF9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G045600v3 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.1e-50
Identity = 94/103 (91.26%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           + VTFHYVGYNESGRRIDSTYLQGSPA+IR+GTNAL+PGFEEGIR MRPGGKRRII+PPE
Sbjct: 84  QQVTFHYVGYNESGRRIDSTYLQGSPAKIRMGTNALIPGFEEGIRDMRPGGKRRIIVPPE 143

Query: 62  LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN 105
           LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTI FYSD+VCN
Sbjct: 144 LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIGFYSDVVCN 186

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BLAST of Carg17665 vs. TrEMBL
Match: tr|B9MVA6|B9MVA6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G045600v3 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.1e-50
Identity = 94/103 (91.26%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           + VTFHYVGYNESGRRIDSTYLQGSPA+IR+GTNAL+PGFEEGIR MRPGGKRRII+PPE
Sbjct: 108 QQVTFHYVGYNESGRRIDSTYLQGSPAKIRMGTNALIPGFEEGIRDMRPGGKRRIIVPPE 167

Query: 62  LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN 105
           LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTI FYSD+VCN
Sbjct: 168 LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIGFYSDVVCN 210

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BLAST of Carg17665 vs. TrEMBL
Match: tr|A0A2K1XQG0|A0A2K1XQG0_POPTR (Peptidylprolyl isomerase OS=Populus trichocarpa OX=3694 GN=POPTR_014G045600v3 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.1e-50
Identity = 94/103 (91.26%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 2   KMVTFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPE 61
           + VTFHYVGYNESGRRIDSTYLQGSPA+IR+GTNAL+PGFEEGIR MRPGGKRRII+PPE
Sbjct: 165 QQVTFHYVGYNESGRRIDSTYLQGSPAKIRMGTNALIPGFEEGIRDMRPGGKRRIIVPPE 224

Query: 62  LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIAFYSDIVCN 105
           LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTI FYSD+VCN
Sbjct: 225 LGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTIGFYSDVVCN 267

The following BLAST results are available for this feature:

BLAST of Carg17665 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924401.1	3.7e-52	98.06	peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucurbita moschata]	[more]
XP_022979534.1	3.7e-52	98.06	peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucurbita maxima]	[more]
XP_023529045.1	3.7e-52	98.06	peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucurbita pepo subs...	[more]
XP_022153538.1	1.2e-50	94.17	peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X1 [Momordic...	[more]
XP_022153545.1	1.2e-50	94.17	peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X2 [Momordic...	[more]

BLAST of Carg17665 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60370.1	8.8e-48	81.73	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT4G25340.1	5.6e-10	34.09	FK506 BINDING PROTEIN 53	[more]
AT5G05420.1	5.6e-10	35.63	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT5G45680.1	6.2e-09	40.30	FK506-binding protein 13	[more]
AT2G43560.1	1.2e-07	42.19	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]

BLAST of Carg17665 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0WRJ7\|FK202_ARATH	1.6e-46	81.73	Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thali...	[more]
sp\|P56989\|FKBP_NEIMA	5.3e-10	36.78	FK506-binding protein OS=Neisseria meningitidis serogroup A / serotype 4A (strai...	[more]
sp\|P0A0W2\|FKBP_NEIMB	5.3e-10	36.78	FK506-binding protein OS=Neisseria meningitidis serogroup B (strain MC58) OX=122...	[more]
sp\|P0A0W3\|FKBP_NEIMC	7.0e-10	36.78	FK506-binding protein OS=Neisseria meningitidis serogroup C OX=135720 GN=fbp PE=...	[more]
sp\|Q9FLB3\|FK153_ARATH	1.0e-08	35.63	Peptidyl-prolyl cis-trans isomerase FKBP15-3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of Carg17665 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|U5FNZ4\|U5FNZ4_POPTR	5.1e-50	91.26	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G045600v3 PE=...	[more]
tr\|U5FPF9\|U5FPF9_POPTR	5.1e-50	91.26	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G045600v3 PE=...	[more]
tr\|U5FSF9\|U5FSF9_POPTR	5.1e-50	91.26	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G045600v3 PE=...	[more]
tr\|B9MVA6\|B9MVA6_POPTR	5.1e-50	91.26	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G045600v3 PE=...	[more]
tr\|A0A2K1XQG0\|A0A2K1XQG0_POPTR	5.1e-50	91.26	Peptidylprolyl isomerase OS=Populus trichocarpa OX=3694 GN=POPTR_014G045600v3 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023566	PPIase_FKBP
IPR001179	PPIase_FKBP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17665-RA	Carg17665-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00254	FKBP_C	coord: 3..84 e-value: 1.8E-16 score: 60.1
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50059	FKBP_PPIASE	coord: 1..88 score: 16.492
None	No IPR available	GENE3D	G3DSA:3.10.50.40		coord: 1..89 e-value: 4.1E-23 score: 83.7
None	No IPR available	PANTHER	PTHR10516:SF387	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC	coord: 3..104
None	No IPR available	SUPERFAMILY	SSF54534	FKBP-like	coord: 3..90
IPR023566	Peptidyl-prolyl cis-trans isomerase, FKBP-type	PANTHER	PTHR10516	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 3..104

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17665	Cla021108	Watermelon (97103) v1	carwmB0130
Carg17665	Csa3G118090	Cucumber (Chinese Long) v2	carcuB0145
Carg17665	MELO3C005979	Melon (DHL92) v3.5.1	carmeB0138
Carg17665	ClCG05G000410	Watermelon (Charleston Gray)	carwcgB0128
Carg17665	CSPI03G07440	Wild cucumber (PI 183967)	carcpiB0149
Carg17665	Cucsa.259700	Cucumber (Gy14) v1	carcgyB0165
Carg17665	CmaCh14G021450	Cucurbita maxima (Rimu)	carcmaB0173
Carg17665	CmoCh14G022120	Cucurbita moschata (Rifu)	carcmoB0182
Carg17665	Cp4.1LG03g15700	Cucurbita pepo (Zucchini)	carcpeB0192
Carg17665	MELO3C005979.2	Melon (DHL92) v3.6.1	carmedB0142
Carg17665	CsaV3_3G007570	Cucumber (Chinese Long) v3	carcucB0153
Carg17665	Cla97C05G080380	Watermelon (97103) v2	carwmbB0138

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17665	Cucumber (Gy14) v2	carcgybB0143
Carg17665	Cucurbita maxima (Rimu)	carcmaB0176
Carg17665	Cucurbita maxima (Rimu)	carcmaB0177
Carg17665	Cucurbita moschata (Rifu)	carcmoB0185
Carg17665	Cucurbita pepo (Zucchini)	carcpeB0194
Carg17665	Bottle gourd (USVL1VR-Ls)	carlsiB119
Carg17665	Wax gourd	carwgoB0166