Cucsa.259700 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGGGGATAAATGGCGTATAAGGGCGCCATAAGAAATGAGATAACATTACATTACAAATGAGATGTTATTATAGTTTACGAAGTTGAAGATAATGTGTTCGGAATAACGGGAAAACAGCCATGCCATAGCGTTTTCCGCCATTTTCTTTGCAGAAGATATGCTTATTACTTGCTCGACGCCCTCTCTTACATCCTCCGCCCATTCTCTTTCTTGTAAGACCCATTCCTCCACTTCCTATCTTCTTCTTCTTCTCCTTTCATCTCTTCAATTTTCCCACTATTTTGGATTTTTGCGATGAAAATGTACAGAGATTTCGTACTTGCATTTTGGGTACTTTCTATTTTTCTATATTCACAATGAATTTTGCTCTAGATTGAGTTTGCTCTTAATACAACTCCATGTTTTTGGGCATCTGCTTCCTATCGTCTTGTTTGCCTTGCTTGCCTTGTTGCTTGTAGAAGAGGAGTGCGATTTATCGCCTTTAGTGATCTCTCCCTTCTCATCTCCTCAGTATTTCCCCGTCTGCAAGTTCGTTTTTTCGTAGTTGAGCCTCTCTAAGCTGTTCATTTGCAGAAATTATATATATATTTTTTATCTGTTAAAACAGTGATATAATTAAATTTTATTGTAACCTCTTAATTTAAGCCTTTAGTTTCAGTGGTGAGTTAACGTTGTATAGTGTAAGAATTCTTATGTTCAAACCTCTGAAATTTTATTTCATTCCCAAATATATTGACTTTCACCTATATATTTCCTAAATTTTCAAGATCACAAATAAGGGAGTGAAAGTGATTCCAAAATTGTTGTTGTCATTTTTAAAGTTACCTGTAAAATGCTTTTAAATTTTCAAAACCAATTTTATTGGTATGAGAAATGTGTTTTAAAAGTATAAAATTAAACTTTGAGTGGTTTAAACTGTGTTTCAAAGTCATTTTAAATATGAAGAAAGTGATTTTAATAACTTCAAAATCACTCTCAAACACATACTTACAATATTAGTATAGTTCATTTATTTACTTAAGCTTTTGGGTTGGATAGTTAGTCAACAAGATAGAGTGGTAATTTGACTGTTTTTCAATGCATGCCTCATTGAGTTGGGTTGAATATTGTATTGGTTCATCTCTACCTGTTCCTTTGGTTTTATAAGTCTATTGATGCCCACTGGCAGACAGGGCATTTTCAGGATGTGCAACATCAAGAGCTTTCATAACTCAAACCAAGCAAGTACAGCGCTACTGCTCATGTCAGAGTTTCAATCACAGCAGGTTAGACTTTGAATATTTGTTGATGGCTGTGATTACTGATTTGTATTTCATAGTGAAGAAGGTATCTTGTGATCAGATAAGTGCTGACCAGGAATTTTTTTTCGTGCATGATCAGCGAAGAGAATTCTTATATATCACTATCCAATGAGAATTCCAGGCGAAAGATTCTCCTTTTTTTCTTATCAACTACAGCTTTATTTCCCACTCGGCATTCTTCTGCCAAGACAAAGAATAAGAATCCATACGATGAAAGACGCTTACTAGAGCAAAACAAACGGAGACAAAAAGAAAACAATGCTCCTGTCGACTTTCCAAGCTTTGTCAGGGAAGGTATGTATCAGGCTGCTATTCCATGGTTCTAATGAGGTACCTTCAACTTCAAGGCTTCTAAATGCAACTCTGATGTCTTTCCTGTAAATAAAAGAGAGTCAAATAAAGTCAAATGTATAAACATTACAGATTTTCTAATGTGTGGCTCAGGTTTCGAGGTTAAGGTAATAGCACCAGAGTCCTATGTCAAACGTGACTCTGGGCTCATATATTGGGATATTGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTTTGATTTTCTTTTCAAAACTACAAAATTATTTCTTCAATTTTCTTGCAGAATCAATATCTATCTTTTAGTGGTGTAGTATTCAGATTAGAAAACCATATATTCAGTTGAAGTGTGTTTGACTTGCTGATTCGTTTGTCACATTTTATGGTGTCAGTATGAATTGAGAGTTCACTTTTATTTGAGAGAAAGAGAGAGAGAAAGGAAATGATGTGTCCACATTGTGATTTCCCGGAAATGAATTCCAATCTCTGATGTCAGCCAACAAGAATGGCATTAAGATTGTTCATGTAAGAAATCCTAGAAGGCTGAATGATACTTCGTGAACGTTCACTTGCAATTCTCAAAAGATTGTTGGTCCATTGATGACTACTTTGTATCAGAATCTCAGAAGCTTAAAGAAAATGATATATGCACGTGCACCTTTTGCAGTAATAGCCGGACTTAGAATTGGTTAACATAAGATTATTTTAATTCGTATACATAGTTTAGTGATTAGGTCTCTATTTGAAAGACAAAACTGAGTTTGAGGGGTGGAATTTCCAGGAACTTCAGAAGATATCTGGAAATGTATGAAAAGTGTTTCTTGGTTTCATCTAAATAATTGTAAGAACAATTTGAATGTTGTTGGTAAAAATAATTCACCAACCTCAATATGAACAGCTGATTTTGTAATAAGTGATCGTTGCATGTTTTTGACATTAGTGAAGTTTCCTGGTGTACATTGTGAATGTGAAGTTCCTTTCAGGTGATCTTTCACTATGTTGGCTATAATGAATCTGGTCGTCGAATTGATAGCACATACTTACAGGGTTCTCCTGCCAGAATCCGTGTGGGCACAAATGCATTGGTCCCAGGTAGTTAAATCATGCCCCTTTATCACCAAACACACCCACAAGAGGAAAAAAGAACACTCACCACCAATTTTGTAAAAGCAAGAGGAAATTTATATGCAGTTGAAAATATCAAATAGCATCTGAAAGAAAAATATTGCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAAAGGAGAATGATAATCCCACCAGAACTTGGACCTCCTGTGAGTTCTCAAGCATGTGATTATTGTTTCAGTTTTATATAAACATCTTAAATATCTTGTAACTGATTGTTATATATGCAGCAATTTTTATTCATGCAAGCAAAGACCACACCCATAATTTGACCTCCCATTTGCTGCAGTTGTATTTACACGTGATAGAATTCAACTCCAGCTAGACAAGCCTCTATCTTTTACCATGAGATTGTTTATATAGCTAACTAAATGATGTTTTCTTGCTTAGCAGAATACTAGAATCTCAATAGGAGAGAGGACACTAATATTGGAGAACATACTAGGTTGGGGTAGATTAGAAAGTTGCCTACTCAAAGTAAAGGAACCCCAGCAGGCATTAGCAAATAAGTTGAACTGAATAAGAGGATAATAATAGCAAATGTACAACAGGTGAAAGAAAATCAACCCAAGAAGACAATATGATTACAAAAGTTTCCTCAAAACAATAGTTGCAAAAAGTTATTTTTTGATTAAAAAAAATCCATAAAAACATAGGAGTGACTGATTGTGAAAACTGAAAAACCTTTGAAATACACCCTGAATAACCCTCAAAGCTCGAACTCTCTAAAATTCCCCTCCTTGTGTACAATAAAGGTTTTGCGCTTTCTTATGGAGTGAATTTCCATTTTCCAGATAATGGAGCTTACTAATCTAAGAAATCTTAGTTCTATATATCAACCAGTGACCACAAACTTGATGTTTTAAAAATCTTGAAACTTGTTGGAGAAGTGCTACAATGGATGTAATTCCTTTTGGAGTTTATTTGCAGATTTCTTCATGCTACATTGGAAAAATAGGCCCTCTGGATCTTCATTCTCAGTAGAAACACTAACGTAGAGAAAGGCCAAAGCAGGAAATGACTTTTTGCACCGAATCAGTTCTGTTGACTCCTCATGCTAAGGGCTGGATGAAGAATTCGATATCTTTAGAATTTCTTTCTAAGTAGTAAATAATTTGGGATGGTTGAGAAGACCGAGGTTGCCATTCTTGATTGTCAATTTTCAAGACTGAATATCTGAACCACTTTTGTTCGCCTTCCAGCTATTTTTGTTTGACAAAACTATGTGAATGGCAATGCCATTGCCAACTAACGAATCTGGAGGGGTGGGGGGTGGGGGAGACAATGAGTTATCCAGAGATCCACTCATCTTCCCAAGAAGAAATATTGTCACTCTTATGGTTTCACAAAGATGTTATATTCGACAAGAATCTCCTAGGACTTCTTTACTTAAGACCTCTTCTTTTGGCACAACCAATCTCCCTTAAGAACCTCATAAGTCATACTTGCAACCTTATATTTGCACACTAGAGTTCTTTGCTGCAGTCACTTGTGAAAAAATTTCTACCATGTAGATGCAACAACCACTTTTTTCTGTATCAAATTATCTTGAACCTAAACCTCCAACGATCAAATGAATAATTGAACTCCATTGAATCAAGTGATTTCCTCCTTCAGTTCATAGCTTCCTTTGCATGGTCGTTCGTACTTTTCTCTCGTCTTCCCATGGTACATCCTTTTTGAAATGAATGAAATTTCTTCTTAAATATATATAAGTCGACGCTCATTCTTCTTGCACGTATGAATGGGAAGCTTGTGATTAAATTTAAAAGAAACTGCAGATGCGTGTGGTACGAGAGCATATTGCCTTGTCATAGGGCCACACACTCCCTCTTTGTCCATTCTTATACGAGTCTCTGAGACTGGATTTTGGTAGTTTTCTGCTCAACTTATTTTATGCATTTTTTTTTTCTATGCAAGTAAGACAAAGGAAGAATTCTGGATCTCAGTTATCAAATCAGATATGCAGATAAACTCCATTCTTTGTCCTAGGAGTAAATTTTTTTTTCACTGTTCCCATGTCTAGAAAAACTAATGAATGGGGATACACATGTCTTACCTCTTTAAATTGAAAAGGCAGAATGCTTGCACTGATGTTTACTTGTTTGCTTACCTTGATGCCTGATGGGGTCACCATTTTTTACGTTTCTGTGACTAATGTGATGACGATGATCTAATTCAATTGATTTGACTTTTTGATTATCAGGTGGGGCCTTCCACATTTTTCAGCTCAAAACAGTTTGAAGTCTTTGATGTGGAACTGTTAAGCGTCCAAGATTGTCAGAGGAGGACAATAGGCTTTTACTCTGACATTGTTTGCAACTAGGAGTTGAACGTTGCCATTTTGAGGTACACATGGATCTTTGAGATGAAACAACCTAAAGAAGTCCATACTGCACTATGTATAACAGTTCCACGTGAGATGTTTTACAGAGATTGATCAATCAGATTAAATATCATATTACCAAGTCGCTTGTTTTTCTTCCCCTCTCTCTCACCTTCTGGATAATATCTCCTAAGCCGATCTTGGAGCACGATCGTAACTTTGCTTATCTATCATTTACAAAGAGT TGGGGGATAAATGGCGTATAAGGGCGCCATAAGAAATGAGATAACATTACATTACAAATGAGATGTTATTATAGTTTACGAAGTTGAAGATAATGTGTTCGGAATAACGGGAAAACAGCCATGCCATAGCGTTTTCCGCCATTTTCTTTGCAGAAGATATGCTTATTACTTGCTCGACGCCCTCTCTTACATCCTCCGCCCATTCTCTTTCTTACAGGGCATTTTCAGGATGTGCAACATCAAGAGCTTTCATAACTCAAACCAAGCAAGTACAGCGCTACTGCTCATGTCAGAGTTTCAATCACAGCAGCGAAGAGAATTCTTATATATCACTATCCAATGAGAATTCCAGGCGAAAGATTCTCCTTTTTTTCTTATCAACTACAGCTTTATTTCCCACTCGGCATTCTTCTGCCAAGACAAAGAATAAGAATCCATACGATGAAAGACGCTTACTAGAGCAAAACAAACGGAGACAAAAAGAAAACAATGCTCCTGTCGACTTTCCAAGCTTTGTCAGGGAAGGTTTCGAGGTTAAGGTAATAGCACCAGAGTCCTATGTCAAACGTGACTCTGGGCTCATATATTGGGATATTGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTGATCTTTCACTATGTTGGCTATAATGAATCTGGTCGTCGAATTGATAGCACATACTTACAGGGTTCTCCTGCCAGAATCCGTGTGGGCACAAATGCATTGGTCCCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAAAGGAGAATGATAATCCCACCAGAACTTGGACCTCCTGTGGGGCCTTCCACATTTTTCAGCTCAAAACAGTTTGAAGTCTTTGATGTGGAACTGTTAAGCGTCCAAGATTGTCAGAGGAGGACAATAGGCTTTTACTCTGACATTGTTTGCAACTAGGAGTTGAACGTTGCCATTTTGAGGTACACATGGATCTTTGAGATGAAACAACCTAAAGAAGTCCATACTGCACTATGTATAACAGTTCCACGTGAGATGTTTTACAGAGATTGATCAATCAGATTAAATATCATATTACCAAGTCGCTTGTTTTTCTTCCCCTCTCTCTCACCTTCTGGATAATATCTCCTAAGCCGATCTTGGAGCACGATCGTAACTTTGCTTATCTATCATTTACAAAGAGT ATGCTTATTACTTGCTCGACGCCCTCTCTTACATCCTCCGCCCATTCTCTTTCTTACAGGGCATTTTCAGGATGTGCAACATCAAGAGCTTTCATAACTCAAACCAAGCAAGTACAGCGCTACTGCTCATGTCAGAGTTTCAATCACAGCAGCGAAGAGAATTCTTATATATCACTATCCAATGAGAATTCCAGGCGAAAGATTCTCCTTTTTTTCTTATCAACTACAGCTTTATTTCCCACTCGGCATTCTTCTGCCAAGACAAAGAATAAGAATCCATACGATGAAAGACGCTTACTAGAGCAAAACAAACGGAGACAAAAAGAAAACAATGCTCCTGTCGACTTTCCAAGCTTTGTCAGGGAAGGTTTCGAGGTTAAGGTAATAGCACCAGAGTCCTATGTCAAACGTGACTCTGGGCTCATATATTGGGATATTGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTGATCTTTCACTATGTTGGCTATAATGAATCTGGTCGTCGAATTGATAGCACATACTTACAGGGTTCTCCTGCCAGAATCCGTGTGGGCACAAATGCATTGGTCCCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAAAGGAGAATGATAATCCCACCAGAACTTGGACCTCCTGTGGGGCCTTCCACATTTTTCAGCTCAAAACAGTTTGAAGTCTTTGATGTGGAACTGTTAAGCGTCCAAGATTGTCAGAGGAGGACAATAGGCTTTTACTCTGACATTGTTTGCAACTAG MLITCSTPSLTSSAHSLSYRAFSGCATSRAFITQTKQVQRYCSCQSFNHSSEENSYISLSNENSRRKILLFFLSTTALFPTRHSSAKTKNKNPYDERRLLEQNKRRQKENNAPVDFPSFVREGFEVKVIAPESYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN*
BLAST of Cucsa.259700 vs. Swiss-Prot
Match: FK202_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana GN=FKBP20-2 PE=1 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 6.8e-83 Identity = 149/199 (74.87%), Postives = 174/199 (87.44%), Query Frame = 1
BLAST of Cucsa.259700 vs. Swiss-Prot
Match: FK163_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-3 PE=1 SV=2) HSP 1 Score: 86.7 bits (213), Expect = 4.2e-16 Identity = 63/200 (31.50%), Postives = 90/200 (45.00%), Query Frame = 1
BLAST of Cucsa.259700 vs. Swiss-Prot
Match: FKBA_ECOLI (FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli (strain K12) GN=fkpA PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.0e-14 Identity = 45/122 (36.89%), Postives = 70/122 (57.38%), Query Frame = 1
BLAST of Cucsa.259700 vs. Swiss-Prot
Match: FKBA_ECOL6 (FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fkpA PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.0e-14 Identity = 45/122 (36.89%), Postives = 70/122 (57.38%), Query Frame = 1
BLAST of Cucsa.259700 vs. Swiss-Prot
Match: FKBA_ECO57 (FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli O157:H7 GN=fkpA PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.0e-14 Identity = 45/122 (36.89%), Postives = 70/122 (57.38%), Query Frame = 1
BLAST of Cucsa.259700 vs. TrEMBL
Match: A0A0A0L5Q7_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_3G118090 PE=4 SV=1) HSP 1 Score: 530.8 bits (1366), Expect = 9.4e-148 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 1
BLAST of Cucsa.259700 vs. TrEMBL
Match: A0A0K9S4B1_SPIOL (Peptidyl-prolyl cis-trans isomerase OS=Spinacia oleracea GN=SOVF_000140 PE=4 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 1.2e-94 Identity = 171/259 (66.02%), Postives = 206/259 (79.54%), Query Frame = 1
BLAST of Cucsa.259700 vs. TrEMBL
Match: A0A067JY72_JATCU (Peptidyl-prolyl cis-trans isomerase OS=Jatropha curcas GN=JCGZ_14598 PE=4 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 1.6e-94 Identity = 179/261 (68.58%), Postives = 202/261 (77.39%), Query Frame = 1
BLAST of Cucsa.259700 vs. TrEMBL
Match: F6GV93_VITVI (Peptidyl-prolyl cis-trans isomerase OS=Vitis vinifera GN=VIT_15s0021g01850 PE=4 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 6.0e-94 Identity = 169/243 (69.55%), Postives = 197/243 (81.07%), Query Frame = 1
BLAST of Cucsa.259700 vs. TrEMBL
Match: A0A061DUG5_THECC (Peptidyl-prolyl cis-trans isomerase OS=Theobroma cacao GN=TCM_005693 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 3.9e-93 Identity = 171/248 (68.95%), Postives = 196/248 (79.03%), Query Frame = 1
BLAST of Cucsa.259700 vs. TAIR10
Match: AT3G60370.1 (AT3G60370.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 308.5 bits (789), Expect = 3.8e-84 Identity = 149/199 (74.87%), Postives = 174/199 (87.44%), Query Frame = 1
BLAST of Cucsa.259700 vs. TAIR10
Match: AT2G43560.1 (AT2G43560.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 86.7 bits (213), Expect = 2.4e-17 Identity = 63/200 (31.50%), Postives = 90/200 (45.00%), Query Frame = 1
BLAST of Cucsa.259700 vs. TAIR10
Match: AT4G25340.1 (AT4G25340.1 FK506 BINDING PROTEIN 53) HSP 1 Score: 72.8 bits (177), Expect = 3.6e-13 Identity = 52/201 (25.87%), Postives = 96/201 (47.76%), Query Frame = 1
BLAST of Cucsa.259700 vs. TAIR10
Match: AT4G19830.1 (AT4G19830.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 67.4 bits (163), Expect = 1.5e-11 Identity = 46/158 (29.11%), Postives = 71/158 (44.94%), Query Frame = 1
BLAST of Cucsa.259700 vs. TAIR10
Match: AT5G13410.1 (AT5G13410.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 66.6 bits (161), Expect = 2.5e-11 Identity = 46/161 (28.57%), Postives = 70/161 (43.48%), Query Frame = 1
BLAST of Cucsa.259700 vs. NCBI nr
Match: gi|449431986|ref|XP_004133781.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis sativus]) HSP 1 Score: 530.8 bits (1366), Expect = 1.4e-147 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 1
BLAST of Cucsa.259700 vs. NCBI nr
Match: gi|659074833|ref|XP_008437821.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis melo]) HSP 1 Score: 503.8 bits (1296), Expect = 1.8e-139 Identity = 249/260 (95.77%), Postives = 253/260 (97.31%), Query Frame = 1
BLAST of Cucsa.259700 vs. NCBI nr
Match: gi|902240836|gb|KNA26094.1| (hypothetical protein SOVF_000140 [Spinacia oleracea]) HSP 1 Score: 354.4 bits (908), Expect = 1.7e-94 Identity = 171/259 (66.02%), Postives = 206/259 (79.54%), Query Frame = 1
BLAST of Cucsa.259700 vs. NCBI nr
Match: gi|802700278|ref|XP_012083663.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Jatropha curcas]) HSP 1 Score: 354.0 bits (907), Expect = 2.3e-94 Identity = 179/261 (68.58%), Postives = 202/261 (77.39%), Query Frame = 1
BLAST of Cucsa.259700 vs. NCBI nr
Match: gi|225453422|ref|XP_002274957.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Vitis vinifera]) HSP 1 Score: 352.1 bits (902), Expect = 8.6e-94 Identity = 169/243 (69.55%), Postives = 197/243 (81.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|