Cla014398 (gene) Watermelon (97103) v1

Overview
NameCla014398
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPentatricopeptide repeat protein 65 (AHRD V1 ***- F5CAD8_FUNHY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
LocationChr1 : 30475424 .. 30476515 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTTGTTGGATATGTACCGAATGAATATCTTAACACCAAACTACTGATATTATATGCCAAATCAGGTGACCTAGAAACTGCATGTATCCTTCATGAAAATTTGTTGGAGAAAAGTTTGGTTTCATGGAATTCATTGATTGCTGGGTATGTACAGAAGGGGCTTGGGGAAGTTGGATTGGAGTTTTATTTTAAGATGAGACAAAGTGGTGTATTGCCTGATCAATATACCTTTGCATCAGTTTTAAGAGCTTGTGCTAGTTTAGCTTCTTTAGAACATGGAAAGAGAGCACATGGAGTTTTGATTAAATGTCAAATTGGTGATAATGTTGTTGTGTCTAGTGCTCTTGTAGATATGTACTTCAAATGCAGCTGCTTATCCGATGGGCATAAGGCATTCAACAAATCTTCAAATAGGAATGTAATTACATGGACTGCTTTGATATCTGGGTATGGTCAGCATGGAAGAGCTATTGAAGTTTTGGAATCATTTCATAGTATGATAAACGAAGGCTACCGGCCAAATTATGTTACTTTCCTTGCGGTTCTTGTTGCTTGTGGTCGTGGAGGCTTTGTACCAGAAGCGTGGAGATACTTTTCATTGATGACAAAATATGGAATCGAACCAAGAGGGCAACATTATGCTGCCATGGCTGATCTTCTTGCCAGAGCTGGGAGGTTGGAAGAGGCCTATAACTTTGTTCTTGATGCACCTTGCAAGGAGCACTCTGTTATGTGGGGGGCTTTGGTTGGGGGCTGTAAGGTACACGAAGATATAGATTTGATGAGACATGCTGCAGCAAATTACTTCTCATTGGATCCTGAAAACTCTGGAAAGTTAGTGGTTTTCTCAAATGCTTTTGCCACAACTGGGCTGTGGGACAATGTTGAAGAGATTAGAGCTATGATGAAGAAATCAGGAATGAGTAAAGATCCTGGTTATAGCAGAATTGAGATTCAAAGGGAATTCCATTTCTTTGTCAAGAGCGATAAATCTCATCGACAAACTGATGAGATTTATAGAACTATTAATAGGATAACTCCAATTTTGAAAGATGCAGGGTATATTCCTCAAGTATCTGAAAACTAA

mRNA sequence

ATGGTTGTTGTTGGATATGTACCGAATGAATATCTTAACACCAAACTACTGATATTATATGCCAAATCAGGTGACCTAGAAACTGCATGTATCCTTCATGAAAATTTGTTGGAGAAAAGTTTGGTTTCATGGAATTCATTGATTGCTGGGTATGTACAGAAGGGGCTTGGGGAAGTTGGATTGGAGTTTTATTTTAAGATGAGACAAAGTGGTGTATTGCCTGATCAATATACCTTTGCATCAGTTTTAAGAGCTTGTGCTAGTTTAGCTTCTTTAGAACATGGAAAGAGAGCACATGGAGTTTTGATTAAATGTCAAATTGGTGATAATGTTGTTGTGTCTAGTGCTCTTGTAGATATGTACTTCAAATGCAGCTGCTTATCCGATGGGCATAAGGCATTCAACAAATCTTCAAATAGGAATGTAATTACATGGACTGCTTTGATATCTGGGTATGGTCAGCATGGAAGAGCTATTGAAGTTTTGGAATCATTTCATAGTATGATAAACGAAGGCTACCGGCCAAATTATGTTACTTTCCTTGCGGTTCTTGTTGCTTGTGGTCGTGGAGGCTTTGTACCAGAAGCGTGGAGATACTTTTCATTGATGACAAAATATGGAATCGAACCAAGAGGGCAACATTATGCTGCCATGGCTGATCTTCTTGCCAGAGCTGGGAGGTTGGAAGAGGCCTATAACTTTGTTCTTGATGCACCTTGCAAGGAGCACTCTGTTATGTGGGGGGCTTTGGTTGGGGGCTGTAAGGTACACGAAGATATAGATTTGATGAGACATGCTGCAGCAAATTACTTCTCATTGGATCCTGAAAACTCTGGAAAGTTAGTGGTTTTCTCAAATGCTTTTGCCACAACTGGGCTGTGGGACAATGTTGAAGAGATTAGAGCTATGATGAAGAAATCAGGAATGAGTAAAGATCCTGGTTATAGCAGAATTGAGATTCAAAGGGAATTCCATTTCTTTGTCAAGAGCGATAAATCTCATCGACAAACTGATGAGATTTATAGAACTATTAATAGGATAACTCCAATTTTGAAAGATGCAGGGTATATTCCTCAAGTATCTGAAAACTAA

Coding sequence (CDS)

ATGGTTGTTGTTGGATATGTACCGAATGAATATCTTAACACCAAACTACTGATATTATATGCCAAATCAGGTGACCTAGAAACTGCATGTATCCTTCATGAAAATTTGTTGGAGAAAAGTTTGGTTTCATGGAATTCATTGATTGCTGGGTATGTACAGAAGGGGCTTGGGGAAGTTGGATTGGAGTTTTATTTTAAGATGAGACAAAGTGGTGTATTGCCTGATCAATATACCTTTGCATCAGTTTTAAGAGCTTGTGCTAGTTTAGCTTCTTTAGAACATGGAAAGAGAGCACATGGAGTTTTGATTAAATGTCAAATTGGTGATAATGTTGTTGTGTCTAGTGCTCTTGTAGATATGTACTTCAAATGCAGCTGCTTATCCGATGGGCATAAGGCATTCAACAAATCTTCAAATAGGAATGTAATTACATGGACTGCTTTGATATCTGGGTATGGTCAGCATGGAAGAGCTATTGAAGTTTTGGAATCATTTCATAGTATGATAAACGAAGGCTACCGGCCAAATTATGTTACTTTCCTTGCGGTTCTTGTTGCTTGTGGTCGTGGAGGCTTTGTACCAGAAGCGTGGAGATACTTTTCATTGATGACAAAATATGGAATCGAACCAAGAGGGCAACATTATGCTGCCATGGCTGATCTTCTTGCCAGAGCTGGGAGGTTGGAAGAGGCCTATAACTTTGTTCTTGATGCACCTTGCAAGGAGCACTCTGTTATGTGGGGGGCTTTGGTTGGGGGCTGTAAGGTACACGAAGATATAGATTTGATGAGACATGCTGCAGCAAATTACTTCTCATTGGATCCTGAAAACTCTGGAAAGTTAGTGGTTTTCTCAAATGCTTTTGCCACAACTGGGCTGTGGGACAATGTTGAAGAGATTAGAGCTATGATGAAGAAATCAGGAATGAGTAAAGATCCTGGTTATAGCAGAATTGAGATTCAAAGGGAATTCCATTTCTTTGTCAAGAGCGATAAATCTCATCGACAAACTGATGAGATTTATAGAACTATTAATAGGATAACTCCAATTTTGAAAGATGCAGGGTATATTCCTCAAGTATCTGAAAACTAA

Protein sequence

MVVVGYVPNEYLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVGLEFYFKMRQSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSCLSDGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVLVACGRGGFVPEAWRYFSLMTKYGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAPCKEHSVMWGALVGGCKVHEDIDLMRHAAANYFSLDPENSGKLVVFSNAFATTGLWDNVEEIRAMMKKSGMSKDPGYSRIEIQREFHFFVKSDKSHRQTDEIYRTINRITPILKDAGYIPQVSEN
Homology
[Close]
BLAST of Cla014398 vs. Swiss-Prot
Match: PP315_ARATH (Pentatricopeptide repeat-containing protein At4g16470 OS=Arabidopsis thaliana GN=PCMP-E12 PE=2 SV=2)

HSP 1 Score: 421.0 bits (1081), Expect = 1.3e-116
Identity = 200/359 (55.71%), Postives = 256/359 (71.31%), Query Frame = 1 

Query: 1   MVVVGYVPNEYLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVG 60
           M VVG+  NEYL  KLLILYA SGDL+TA IL  +L  + L+ WN++I+GYVQKGL + G
Sbjct: 134 MFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEG 193

Query: 61  LEFYFKMRQSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDM 120
           L  Y+ MRQ+ ++PDQYTFASV RAC++L  LEHGKRAH V+IK  I  N++V SALVDM
Sbjct: 194 LFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDM 253

Query: 121 YFKCSCLSDGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTF 180
           YFKCS  SDGH+ F++ S RNVITWT+LISGYG HG+  EVL+ F  M  EG RPN VTF
Sbjct: 254 YFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTF 313

Query: 181 LAVLVACGRGGFVPEAWRYF-SLMTKYGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAP 240
           L VL AC  GG V + W +F S+   YGIEP GQHYAAM D L RAGRL+EAY FV+ +P
Sbjct: 314 LVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSP 373

Query: 241 CKEHSVMWGALVGGCKVHEDIDLMRHAAANYFSLDPENSGKLVVFSNAFATTGLWDNVEE 300
           CKEH  +WG+L+G C++H ++ L+  AA  +  LDP N G  VVF+N +A+ GL +   +
Sbjct: 374 CKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASK 433

Query: 301 IRAMMKKSGMSKDPGYSRIEIQREFHFFVKSDKSHRQTDEIYRTINRITPILKDAGYIP 359
           +R  M+ +G+ KDPGYS+IE+Q E H F+K D SHR +++IY+ ++ +T    D  Y P
Sbjct: 434 VRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYP 492

[Close]
BLAST of Cla014398 vs. Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 4.7e-74
Identity = 134/358 (37.43%), Postives = 215/358 (60.06%), Query Frame = 1 

Query: 5   GYVPNEYLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVGLEFY 64
           G   + ++ + L+ ++AK G+ E A  + + ++    + WNS+I G+ Q    +V LE +
Sbjct: 189 GLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELF 248

Query: 65  FKMRQSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKC 124
            +M+++G + +Q T  SVLRAC  LA LE G +AH  ++K     ++++++ALVDMY KC
Sbjct: 249 KRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKC 308

Query: 125 SCLSDGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVL 184
             L D  + FN+   R+VITW+ +ISG  Q+G + E L+ F  M + G +PNY+T + VL
Sbjct: 309 GSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVL 368

Query: 185 VACGRGGFVPEAWRYFSLMTK-YGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAPCKEH 244
            AC   G + + W YF  M K YGI+P  +HY  M DLL +AG+L++A   + +  C+  
Sbjct: 369 FACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPD 428

Query: 245 SVMWGALVGGCKVHEDIDLMRHAAANYFSLDPENSGKLVVFSNAFATTGLWDNVEEIRAM 304
           +V W  L+G C+V  ++ L  +AA    +LDPE++G   + SN +A +  WD+VEEIR  
Sbjct: 429 AVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTR 488

Query: 305 MKKSGMSKDPGYSRIEIQREFHFFVKSDKSHRQTDEIYRTINRITPILKDAGYIPQVS 362
           M+  G+ K+PG S IE+ ++ H F+  D SH Q  E+ + +N++   L   GY+P+ +
Sbjct: 489 MRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETN 544


HSP 2 Score: 77.0 bits (188), Expect = 4.7e-13
Identity = 50/190 (26.32%), Postives = 95/190 (50.00%), Query Frame = 1 

Query: 67  MRQSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSC 126
           ++  G+  D  T++ +++ C S  ++  G      L        + + + L++MY K + 
Sbjct: 52  LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111

Query: 127 LSDGHKAFNKSSNRNVITWTALISGYGQ---HGRAIEVLESFHSMINEGYRPNYVTFLAV 186
           L+D H+ F++   RNVI+WT +IS Y +   H +A+E+L     M+ +  RPN  T+ +V
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLV---LMLRDNVRPNVYTYSSV 171

Query: 187 LVACGRGGFVPEAWRYFSLMTKYGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAPCKEH 246
           L +C     + +       + K G+E      +A+ D+ A+ G  E+A + V D      
Sbjct: 172 LRSCNG---MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS-VFDEMVTGD 231

Query: 247 SVMWGALVGG 254
           +++W +++GG
Sbjct: 232 AIVWNSIIGG 234

[Close]
BLAST of Cla014398 vs. Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.2e-72
Identity = 135/346 (39.02%), Postives = 206/346 (59.54%), Query Frame = 1 

Query: 7   VPNEYLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVGLEFYFK 66
           + N    T ++  YA +   + A ++   + E+++VSWN+LIAGY Q G  E  L  +  
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376

Query: 67  MRQSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIK----CQIG--DNVVVSSALVDM 126
           +++  V P  Y+FA++L+ACA LA L  G +AH  ++K     Q G  D++ V ++L+DM
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436

Query: 127 YFKCSCLSDGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTF 186
           Y KC C+ +G+  F K   R+ ++W A+I G+ Q+G   E LE F  M+  G +P+++T 
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITM 496

Query: 187 LAVLVACGRGGFVPEAWRYFSLMTK-YGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAP 246
           + VL ACG  GFV E   YFS MT+ +G+ P   HY  M DLL RAG LEEA + + + P
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP 556

Query: 247 CKEHSVMWGALVGGCKVHEDIDLMRHAAANYFSLDPENSGKLVVFSNAFATTGLWDNVEE 306
            +  SV+WG+L+  CKVH +I L ++ A     ++P NSG  V+ SN +A  G W++V  
Sbjct: 557 MQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMN 616

Query: 307 IRAMMKKSGMSKDPGYSRIEIQREFHFFVKSDKSHRQTDEIYRTIN 346
           +R  M+K G++K PG S I+IQ   H F+  DKSH +  +I+  ++
Sbjct: 617 VRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLD 662


HSP 2 Score: 122.1 bits (305), Expect = 1.3e-26
Identity = 69/231 (29.87%), Postives = 119/231 (51.52%), Query Frame = 1 

Query: 9   NEYLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVGLEFYFKMR 68
           N Y    ++    K G L+ A  L  ++ E+   +WNS+++G+ Q    E  L ++  M 
Sbjct: 85  NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144

Query: 69  QSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSCLS 128
           + G + ++Y+FASVL AC+ L  +  G + H ++ K     +V + SALVDMY KC  ++
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 204

Query: 129 DGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVLVACG 188
           D  + F++  +RNV++W +LI+ + Q+G A+E L+ F  M+     P+ VT  +V+ AC 
Sbjct: 205 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264

Query: 189 RGGFVPEAWRYFSLMTKYGIEPRGQHYA-AMADLLARAGRLEEAYNFVLDA 239
               +         + K          + A  D+ A+  R++EA  F+ D+
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEA-RFIFDS 314


HSP 3 Score: 112.1 bits (279), Expect = 1.3e-23
Identity = 70/228 (30.70%), Postives = 123/228 (53.95%), Query Frame = 1 

Query: 6   YVPNEYLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVGLEFYF 65
           ++ + Y+ + L+ +Y+K G++  A  + + + ++++VSWNSLI  + Q G     L+ + 
Sbjct: 183 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQ 242

Query: 66  KMRQSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIK-CQIGDNVVVSSALVDMYFKC 125
            M +S V PD+ T ASV+ ACASL++++ G+  HG ++K  ++ +++++S+A VDMY KC
Sbjct: 243 MMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKC 302

Query: 126 SCLSDGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVL 185
           S + +    F+    RNVI  T++ISGY            F  M       N V++ A++
Sbjct: 303 SRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAER----NVVSWNALI 362

Query: 186 VACGRGGFVPEAWRYFSLMTKYGIEPRGQHYAAMADLLARAGRLEEAY 233
               + G   EA   F L+ +  + P   HY + A++L     L E +
Sbjct: 363 AGYTQNGENEEALSLFCLLKRESVCP--THY-SFANILKACADLAELH 403


HSP 4 Score: 60.8 bits (146), Expect = 3.4e-08
Identity = 38/134 (28.36%), Postives = 63/134 (47.01%), Query Frame = 1 

Query: 75  DQYTFASVLRACA-SLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSCLSDGHKA 134
           D   FA +L +C  S  S  + +  H  +IK    + + + + L+D Y KC  L DG + 
Sbjct: 18  DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77

Query: 135 FNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVLVACGRGGFV 194
           F+K   RN+ TW ++++G  + G   E    F SM       +  T+ +++    +    
Sbjct: 78  FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRC 137

Query: 195 PEAWRYFSLMTKYG 208
            EA  YF++M K G
Sbjct: 138 EEALCYFAMMHKEG 147

[Close]
BLAST of Cla014398 vs. Swiss-Prot
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2)

HSP 1 Score: 273.1 bits (697), Expect = 4.4e-72
Identity = 127/336 (37.80%), Postives = 207/336 (61.61%), Query Frame = 1 

Query: 26  LETACILHENLLEKSLVSWNSLIAGYVQKGLGEVGLEFYFKMRQSGVLPDQYTFASVLRA 85
           LE   +  E  +E ++VSW S+IAG  Q G     LE + +M+ +GV P+  T  S+L A
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397

Query: 86  CASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSCLSDGHKAFNKSSNRNVITW 145
           C ++A+L HG+  HG  ++  + DNV V SAL+DMY KC  ++     FN    +N++ W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457

Query: 146 TALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVLVACGRGGFVPEAWRYFSLMT- 205
            +L++G+  HG+A EV+  F S++    +P++++F ++L ACG+ G   E W+YF +M+ 
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE 517

Query: 206 KYGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAPCKEHSVMWGALVGGCKVHEDIDLMR 265
           +YGI+PR +HY+ M +LL RAG+L+EAY+ + + P +  S +WGAL+  C++  ++DL  
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAE 577

Query: 266 HAAANYFSLDPENSGKLVVFSNAFATTGLWDNVEEIRAMMKKSGMSKDPGYSRIEIQREF 325
            AA   F L+PEN G  V+ SN +A  G+W  V+ IR  M+  G+ K+PG S I+++   
Sbjct: 578 IAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRV 637

Query: 326 HFFVKSDKSHRQTDEIYRTINRITPILKDAGYIPQV 361
           +  +  DKSH Q D+I   ++ I+  ++ +G+ P +
Sbjct: 638 YTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNL 673


HSP 2 Score: 89.7 bits (221), Expect = 6.9e-17
Identity = 49/200 (24.50%), Postives = 97/200 (48.50%), Query Frame = 1 

Query: 11  YLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVGLEFYFKMRQS 70
           Y++ KL+  Y+       A ++ +++ + ++ S++SLI    +  L    +  + +M   
Sbjct: 51  YISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSH 110

Query: 71  GVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSCLSDG 130
           G++PD +   ++ + CA L++ + GK+ H V     +  +  V  ++  MY +C  + D 
Sbjct: 111 GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDA 170

Query: 131 HKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVLVACGRG 190
            K F++ S+++V+T +AL+  Y + G   EV+     M + G   N V++  +L    R 
Sbjct: 171 RKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRS 230

Query: 191 GFVPEAWRYFSLMTKYGIEP 211
           G+  EA   F  +   G  P
Sbjct: 231 GYHKEAVVMFQKIHHLGFCP 250


HSP 3 Score: 85.1 bits (209), Expect = 1.7e-15
Identity = 57/217 (26.27%), Postives = 98/217 (45.16%), Query Frame = 1 

Query: 16  LLILYAKSGDLETACILHENL----LEKSLVSWNSLIAGYVQKGLGEVGLEFYFKMRQSG 75
           LL  YA+ G LE    +   +    +E ++VSWN +++G+ + G  +  +  + K+   G
Sbjct: 188 LLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLG 247

Query: 76  VLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSCLSDGH 135
             PDQ T +SVL +      L  G+  HG +IK  +  +  V SA++DMY K   +    
Sbjct: 248 FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGII 307

Query: 136 KAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVLVACGRGG 195
             FN+          A I+G  ++G   + LE F     +    N V++ +++  C + G
Sbjct: 308 SLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367

Query: 196 FVPEAWRYFSLMTKYGIEPRGQHYAAMADLLARAGRL 229
              EA   F  M   G++P   ++  +  +L   G +
Sbjct: 368 KDIEALELFREMQVAGVKP---NHVTIPSMLPACGNI 401

[Close]
BLAST of Cla014398 vs. Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 7.5e-72
Identity = 136/352 (38.64%), Postives = 203/352 (57.67%), Query Frame = 1 

Query: 11  YLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVGLEFYFKMRQS 70
           Y+ + L+ +YAKS  +E +  +   L  +  +SWNSL+AGYVQ G     L  + +M  +
Sbjct: 278 YIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTA 337

Query: 71  GVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSCLSDG 130
            V P    F+SV+ ACA LA+L  GK+ HG +++   G N+ ++SALVDMY KC  +   
Sbjct: 338 KVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAA 397

Query: 131 HKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVLVACGRG 190
            K F++ +  + ++WTA+I G+  HG   E +  F  M  +G +PN V F+AVL AC   
Sbjct: 398 RKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV 457

Query: 191 GFVPEAWRYFSLMTK-YGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAPCKEHSVMWGA 250
           G V EAW YF+ MTK YG+    +HYAA+ADLL RAG+LEEAYNF+     +    +W  
Sbjct: 458 GLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWST 517

Query: 251 LVGGCKVHEDIDLMRHAAANYFSLDPENSGKLVVFSNAFATTGLWDNVEEIRAMMKKSGM 310
           L+  C VH++++L    A   F++D EN G  V+  N +A+ G W  + ++R  M+K G+
Sbjct: 518 LLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGL 577

Query: 311 SKDPGYSRIEIQREFHFFVKSDKSHRQTDEIYRTINRITPILKDAGYIPQVS 362
            K P  S IE++ + H FV  D+SH   D+I   +  +   ++  GY+   S
Sbjct: 578 RKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTS 629


HSP 2 Score: 112.8 bits (281), Expect = 7.6e-24
Identity = 66/224 (29.46%), Postives = 112/224 (50.00%), Query Frame = 1 

Query: 34  ENLLEKSLVSWNSLIAGYVQKGLGEVGLEFYFKMRQSGVLPDQYTFASVLRACASLASLE 93
           E +  K +VS+N++IAGY Q G+ E  L    +M  + + PD +T +SVL   +    + 
Sbjct: 200 EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVI 259

Query: 94  HGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSCLSDGHKAFNKSSNRNVITWTALISGYG 153
            GK  HG +I+  I  +V + S+LVDMY K + + D  + F++   R+ I+W +L++GY 
Sbjct: 260 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYV 319

Query: 154 QHGRAIEVLESFHSMINEGYRPNYVTFLAVLVACGRGGFVPEAWRYFSLMTKYGIEPRGQ 213
           Q+GR  E L  F  M+    +P  V F +V+ AC     +    +    + + G      
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379

Query: 214 HYAAMADLLARAGRLEEAYNFVLDAPCKEHSVMWGALVGGCKVH 258
             +A+ D+ ++ G ++ A   + D       V W A++ G  +H
Sbjct: 380 IASALVDMYSKCGNIKAARK-IFDRMNVLDEVSWTAIIMGHALH 422


HSP 3 Score: 77.8 bits (190), Expect = 2.7e-13
Identity = 58/274 (21.17%), Postives = 113/274 (41.24%), Query Frame = 1 

Query: 16  LLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVGLEFYFKMRQSGVLPD 75
           ++ +Y     L  A +L + L    +++W S+I  +  + L    L  + +MR SG  PD
Sbjct: 45  VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104

Query: 76  QYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKC----SCLSDGH 135
              F SVL++C  +  L  G+  HG +++  +  ++   +AL++MY K     S +S G+
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164

Query: 136 --------------------------------KAFNKSSNRNVITWTALISGYGQHGRAI 195
                                           + F     ++V+++  +I+GY Q G   
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224

Query: 196 EVLESFHSMINEGYRPNYVTFLAVLVACGRGGFVPEAWRYFSLMTKYGIEPRGQHYAAMA 254
           + L     M     +P+  T  +VL        V +       + + GI+      +++ 
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284

[Close]
BLAST of Cla014398 vs. TrEMBL
Match: U5FJN2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s01140g PE=4 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 1.0e-144
Identity = 245/363 (67.49%), Postives = 304/363 (83.75%), Query Frame = 1 

Query: 1   MVVVGYVPNEYLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVG 60
           MVVVGYVPNEYL TKL+ILYAKSGDL+T  +L + L+EKSL+SWN+LIAGYVQKGL E+G
Sbjct: 146 MVVVGYVPNEYLKTKLMILYAKSGDLKTMHLLFDMLMEKSLISWNALIAGYVQKGLEEMG 205

Query: 61  LEFYFKMRQSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDM 120
           L FY++MRQ+G+ PDQYTFASV RACA+LA+LEHGKRAH V++KC + +NVVVSSAL+DM
Sbjct: 206 LSFYYEMRQNGLTPDQYTFASVFRACATLATLEHGKRAHCVMMKCFLKENVVVSSALMDM 265

Query: 121 YFKCSCLSDGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTF 180
           YFKCS LSDGH  F+KSSNRNV+TWT+LISGYG HGR  EV+ESFH M +EG++PNYVTF
Sbjct: 266 YFKCSSLSDGHLVFDKSSNRNVVTWTSLISGYGHHGRVSEVIESFHRMKDEGFQPNYVTF 325

Query: 181 LAVLVACGRGGFVPEAWRYFSLMTK-YGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAP 240
           LAVL AC  GG V E W YFS M + YGI+PRG+HYAAM DLL RAGRL+EAY FV++AP
Sbjct: 326 LAVLSACSHGGLVDEGWAYFSSMRRDYGIQPRGKHYAAMVDLLGRAGRLKEAYEFVVNAP 385

Query: 241 CKEHSVMWGALVGGCKVHEDIDLMRHAAANYFSLDPENSGKLVVFSNAFATTGLWDNVEE 300
           CKEHSV+WGAL+G CK+H D+DL+  AA  YF LDPEN+GK VV SNA+A  GLWD+V E
Sbjct: 386 CKEHSVLWGALLGACKIHGDMDLIELAARKYFELDPENAGKYVVLSNAYAAFGLWDSVAE 445

Query: 301 IRAMMKKSGMSKDPGYSRIEIQREFHFFVKSDKSHRQTDEIYRTINRITPILKDAGYIPQ 360
           +R +M+ + ++K+P YS IE+Q + HFF++ DKSHR+++EIY+TI  +  IL DAGY+P 
Sbjct: 446 VRGVMRDTEINKEPAYSSIEVQGKAHFFLQGDKSHRESEEIYKTIIEMIWILNDAGYVPD 505

Query: 361 VSE 363
           +S+
Sbjct: 506 LSD 508

[Close]
BLAST of Cla014398 vs. TrEMBL
Match: U5FJN2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s01140g PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.8e-10
Identity = 49/189 (25.93%), Postives = 83/189 (43.92%), Query Frame = 1 

Query: 69  QSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSCLS 128
           +SG+  D  T+A +L+ C        GKR H  ++      N  + + L+ +Y K   L 
Sbjct: 113 RSGLEVDHGTYALLLQECIFKKLYNKGKRIHAQMVVVGYVPNEYLKTKLMILYAKSGDLK 172

Query: 129 DGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVLVACG 188
             H  F+    +++I+W ALI+GY Q G     L  ++ M   G  P+  TF +V  AC 
Sbjct: 173 TMHLLFDMLMEKSLISWNALIAGYVQKGLEEMGLSFYYEMRQNGLTPDQYTFASVFRACA 232

Query: 189 RGGFVPEAWRYFSLMTKYGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAPCKEHSVMWG 248
               +    R   +M K  ++      +A+ D+  +   L + +  V D     + V W 
Sbjct: 233 TLATLEHGKRAHCVMMKCFLKENVVVSSALMDMYFKCSSLSDGH-LVFDKSSNRNVVTWT 292

Query: 249 ALVGGCKVH 258
           +L+ G   H
Sbjct: 293 SLISGYGHH 300


HSP 2 Score: 515.4 bits (1326), Expect = 5.7e-143
Identity = 246/361 (68.14%), Postives = 296/361 (81.99%), Query Frame = 1 

Query: 1   MVVVGYVPNEYLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVG 60
           M+VVGY P+EYL TKLLIL+AK+GDL+T+ IL ++L +KSL+SWN++IAGYVQKGL E G
Sbjct: 93  MIVVGYYPDEYLKTKLLILHAKTGDLDTSHILFDDLSKKSLISWNAMIAGYVQKGLEEEG 152

Query: 61  LEFYFKMRQSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDM 120
           L  Y +MRQSG+ PDQYTFASV RACA+LA+LE GK+AH V+IK QI +NVVV+SAL+DM
Sbjct: 153 LNLYDEMRQSGLTPDQYTFASVFRACATLATLEKGKQAHCVMIKSQIKENVVVNSALMDM 212

Query: 121 YFKCSCLSDGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTF 180
           YFKCS L DGH+ FNKS NRNVITWTALISGYGQHGR  EVL  F  M  EG+RPNYVTF
Sbjct: 213 YFKCSSLYDGHRVFNKSLNRNVITWTALISGYGQHGRVAEVLVFFSKMKTEGFRPNYVTF 272

Query: 181 LAVLVACGRGGFVPEAWRYFSLMTK-YGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAP 240
           LAV+ AC  GG V E W YF  MT+ YGI+PRGQHYAAM DLL RAGRL EA+ FV ++P
Sbjct: 273 LAVISACSHGGLVNEGWEYFMSMTRDYGIQPRGQHYAAMVDLLGRAGRLHEAFEFVQNSP 332

Query: 241 CKEHSVMWGALVGGCKVHEDIDLMRHAAANYFSLDPENSGKLVVFSNAFATTGLWDNVEE 300
           C EHSV+WGAL+G C+VH +ID++R AA  YF L+PEN+GK VV SNA+AT GLWDNV E
Sbjct: 333 CGEHSVIWGALLGACRVHGNIDMLRFAAKKYFDLEPENAGKYVVLSNAYATFGLWDNVAE 392

Query: 301 IRAMMKKSGMSKDPGYSRIEIQREFHFFVKSDKSHRQTDEIYRTINRITPILKDAGYIPQ 360
           +R +M++SGM KDPGYSRIE+QRE HFF+  DKSH+QT++IY  I  +T ILKDAGY+P 
Sbjct: 393 VRGVMRESGMRKDPGYSRIEVQREVHFFLMGDKSHKQTEQIYEVIKEVTCILKDAGYVPD 452

[Close]
BLAST of Cla014398 vs. TrEMBL
Match: F6I2E4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0592g00010 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.4e-08
Identity = 45/189 (23.81%), Postives = 86/189 (45.50%), Query Frame = 1 

Query: 69  QSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSCLS 128
           ++G+  +  T+A +L+ C      + G+R H  +I      +  + + L+ ++ K   L 
Sbjct: 60  RTGLQVEPATYALLLQECIFKKEFKTGRRIHAQMIVVGYYPDEYLKTKLLILHAKTGDLD 119

Query: 129 DGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVLVACG 188
             H  F+  S +++I+W A+I+GY Q G   E L  +  M   G  P+  TF +V  AC 
Sbjct: 120 TSHILFDDLSKKSLISWNAMIAGYVQKGLEEEGLNLYDEMRQSGLTPDQYTFASVFRACA 179

Query: 189 RGGFVPEAWRYFSLMTKYGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAPCKEHSVMWG 248
               + +  +   +M K  I+      +A+ D+  +   L + +  V +     + + W 
Sbjct: 180 TLATLEKGKQAHCVMIKSQIKENVVVNSALMDMYFKCSSLYDGHR-VFNKSLNRNVITWT 239

Query: 249 ALVGGCKVH 258
           AL+ G   H
Sbjct: 240 ALISGYGQH 247


HSP 2 Score: 512.7 bits (1319), Expect = 3.7e-142
Identity = 241/362 (66.57%), Postives = 295/362 (81.49%), Query Frame = 1 

Query: 1   MVVVGYVPNEYLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVG 60
           ++VVG+V NEYL TKLLILYAKSG+L TA IL + LLEKSLVSWN++IAGYVQKGL +VG
Sbjct: 31  IIVVGFVLNEYLKTKLLILYAKSGNLGTAHILLDKLLEKSLVSWNAIIAGYVQKGLEDVG 90

Query: 61  LEFYFKMRQSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDM 120
           L  Y+KMR SG++PDQYTFASV RACASLA+LEHGK+AHG++IKCQIG+NVVV+SAL+DM
Sbjct: 91  LSLYYKMRHSGLIPDQYTFASVFRACASLATLEHGKQAHGIMIKCQIGENVVVNSALMDM 150

Query: 121 YFKCSCLSDGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTF 180
           YFKCS L DG + FN   NRN ITWTALISGYGQHGR +EVL+ FH M +EG+RPNYVTF
Sbjct: 151 YFKCSDLCDGQRVFNTCQNRNAITWTALISGYGQHGRVVEVLDIFHRMKSEGFRPNYVTF 210

Query: 181 LAVLVACGRGGFVPEAWRYFSLMTK-YGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAP 240
           ++VL AC  GG V EAW YFS MT+ YGI PR QHYAA+ DLL RAG+LEEAY FV ++P
Sbjct: 211 ISVLSACSHGGLVDEAWEYFSSMTRDYGIHPRAQHYAALVDLLGRAGQLEEAYEFVSNSP 270

Query: 241 CKEHSVMWGALVGGCKVHEDIDLMRHAAANYFSLDPENSGKLVVFSNAFATTGLWDNVEE 300
           CKEHSVMWGA +  C++H D DL++ AA  YF L+PEN+GK VV SNA+AT GLWDNV +
Sbjct: 271 CKEHSVMWGAFLWACRIHGDRDLLKLAAKKYFELEPENAGKYVVLSNAYATFGLWDNVAK 330

Query: 301 IRAMMKKSGMSKDPGYSRIEIQREFHFFVKSDKSHRQTDEIYRTINRITPILKDAGYIPQ 360
           +R+MM  SGM K+P YS++E+Q+E HFF+K D  H+Q+ EIY  +  +   LKD+GY+P 
Sbjct: 331 LRSMMTDSGMRKEPAYSKVEVQKEVHFFLKGDTYHKQSKEIYEMVKLVDCSLKDSGYVPH 390

Query: 361 VS 362
           +S
Sbjct: 391 LS 392

[Close]
BLAST of Cla014398 vs. TrEMBL
Match: M5X4D1_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa018986mg PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.3e-06
Identity = 44/183 (24.04%), Postives = 79/183 (43.17%), Query Frame = 1 

Query: 75  DQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSCLSDGHKAF 134
           D  T+A +L+ C      + GK  H  +I      N  + + L+ +Y K   L   H   
Sbjct: 4   DPDTYALLLQECIFRKEYKKGKIIHAQIIVVGFVLNEYLKTKLLILYAKSGNLGTAHILL 63

Query: 135 NKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVLVACGRGGFVP 194
           +K   +++++W A+I+GY Q G     L  ++ M + G  P+  TF +V  AC     + 
Sbjct: 64  DKLLEKSLVSWNAIIAGYVQKGLEDVGLSLYYKMRHSGLIPDQYTFASVFRACASLATLE 123

Query: 195 EAWRYFSLMTKYGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAPCKEHSVMWGALVGGC 254
              +   +M K  I       +A+ D+  +   L +    V +     +++ W AL+ G 
Sbjct: 124 HGKQAHGIMIKCQIGENVVVNSALMDMYFKCSDLCDGQR-VFNTCQNRNAITWTALISGY 183

Query: 255 KVH 258
             H
Sbjct: 184 GQH 185


HSP 2 Score: 503.8 bits (1296), Expect = 1.7e-139
Identity = 239/362 (66.02%), Postives = 291/362 (80.39%), Query Frame = 1 

Query: 1   MVVVGYVPNEYLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVG 60
           MVVVGYVPNEYL  KLLILYAK GDLETA  L + LLEK+L+SWN++IAG+VQKG GE G
Sbjct: 182 MVVVGYVPNEYLKIKLLILYAKLGDLETAHALFDKLLEKNLISWNAMIAGFVQKGCGEFG 241

Query: 61  LEFYFKMRQSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDM 120
           L+ Y+KMR++G+ PDQYTFASV RACASLA+LEHGKRAHG+LIK  I +NVVVSSAL+DM
Sbjct: 242 LDLYYKMRKNGLTPDQYTFASVFRACASLATLEHGKRAHGILIKSPITENVVVSSALMDM 301

Query: 121 YFKCSCLSDGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTF 180
           YFKCS L+ GH+ F++   RNV+TWT+LISGYGQHGR IEVLESF  M NEG+RPNYVTF
Sbjct: 302 YFKCSSLTHGHQVFDEVVYRNVVTWTSLISGYGQHGRVIEVLESFDKMKNEGFRPNYVTF 361

Query: 181 LAVLVACGRGGFVPEAWRYFSLMTK-YGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAP 240
           LAVL AC  GG V + W YF  MT+ YG++PRGQHYAAM DL+ R+G+L EAY F+L++ 
Sbjct: 362 LAVLSACSHGGLVDKGWHYFLSMTRDYGMQPRGQHYAAMVDLIGRSGKLREAYEFILNSS 421

Query: 241 CKEHSVMWGALVGGCKVHEDIDLMRHAAANYFSLDPENSGKLVVFSNAFATTGLWDNVEE 300
            KEH  +WGAL+G C++H DIDL++ AA  YF LDPEN+GK VV SNA+AT G WDNV  
Sbjct: 422 FKEHPAIWGALLGACRIHGDIDLIKLAADKYFELDPENAGKYVVLSNAYATFGFWDNVAS 481

Query: 301 IRAMMKKSGMSKDPGYSRIEIQREFHFFVKSDKSHRQTDEIYRTINRITPILKDAGYIPQ 360
           +R MM+ SG+ K+P YSRIEIQ E HFF++ D SH+ + EIY  I  +T ILKDAGY+P 
Sbjct: 482 LRRMMRNSGVKKEPAYSRIEIQGEVHFFLRGDISHKHSAEIYELIKLMTSILKDAGYVPD 541

Query: 361 VS 362
           ++
Sbjct: 542 IN 543

[Close]
BLAST of Cla014398 vs. TrEMBL
Match: A0A061GHM4_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_030385 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.7e-09
Identity = 46/183 (25.14%), Postives = 80/183 (43.72%), Query Frame = 1 

Query: 75  DQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSCLSDGHKAF 134
           D  T+A +L+ C      ++G+R H  ++      N  +   L+ +Y K   L   H  F
Sbjct: 155 DAGTYALLLQECIFRKEYKNGRRIHAQMVVVGYVPNEYLKIKLLILYAKLGDLETAHALF 214

Query: 135 NKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVLVACGRGGFVP 194
           +K   +N+I+W A+I+G+ Q G     L+ ++ M   G  P+  TF +V  AC     + 
Sbjct: 215 DKLLEKNLISWNAMIAGFVQKGCGEFGLDLYYKMRKNGLTPDQYTFASVFRACASLATLE 274

Query: 195 EAWRYFSLMTKYGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAPCKEHSVMWGALVGGC 254
              R   ++ K  I       +A+ D+  +   L   +  V D     + V W +L+ G 
Sbjct: 275 HGKRAHGILIKSPITENVVVSSALMDMYFKCSSLTHGHQ-VFDEVVYRNVVTWTSLISGY 334

Query: 255 KVH 258
             H
Sbjct: 335 GQH 336


HSP 2 Score: 497.7 bits (1280), Expect = 1.2e-137
Identity = 231/358 (64.53%), Postives = 292/358 (81.56%), Query Frame = 1 

Query: 1   MVVVGYVPNEYLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVG 60
           MV+VGYVP EY+ TKLLILYAK GDL TA +L + L +KSL+SWN++IAGYVQKG  EVG
Sbjct: 123 MVIVGYVPIEYIKTKLLILYAKYGDLVTAHVLFDKLQQKSLISWNAMIAGYVQKGFEEVG 182

Query: 61  LEFYFKMRQSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDM 120
           L++Y+KMR++G+ PDQYTFAS+ RACA+LA+L++GKRAHG+++KC I +NVVV+SAL+DM
Sbjct: 183 LDYYYKMRENGLRPDQYTFASIFRACATLATLDYGKRAHGLMLKCGIRENVVVNSALIDM 242

Query: 121 YFKCSCLSDGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTF 180
           YFKCS +SDG + F+K SNRNV+TWT+LI+GYGQHGR +EV + FH M +EG+RPNYVTF
Sbjct: 243 YFKCSIISDGRQVFDKLSNRNVVTWTSLIAGYGQHGRVVEVFQLFHRMTSEGFRPNYVTF 302

Query: 181 LAVLVACGRGGFVPEAWRYFSLMTK-YGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAP 240
           LAVL ACG GG V + W YFS M + YGI+PRG+HYAA+ DLL RAG+L+EAY FVL +P
Sbjct: 303 LAVLSACGHGGLVNKGWDYFSSMLRDYGIQPRGKHYAAIVDLLGRAGKLQEAYEFVLSSP 362

Query: 241 CKEHSVMWGALVGGCKVHEDIDLMRHAAANYFSLDPENSGKLVVFSNAFATTGLWDNVEE 300
           C EHSV+WGAL+G C++H DIDL++ AA  YF LDPEN+GK VV +NA+A  G WDNVEE
Sbjct: 363 CMEHSVVWGALLGACRIHGDIDLVKVAAKKYFELDPENAGKYVVLANAYANVGSWDNVEE 422

Query: 301 IRAMMKKSGMSKDPGYSRIEIQREFHFFVKSDKSHRQTDEIYRTINRITPILKDAGYI 358
           +R MM+  G+ K+PGYSRIE+    HFFV  DKSH+ + EI + I  IT ILKDAG +
Sbjct: 423 VRGMMRDLGVVKEPGYSRIEVLGMVHFFVMGDKSHKHSKEINQMIKEITCILKDAGSV 480

[Close]
BLAST of Cla014398 vs. NCBI nr
Match: gi|449434032|ref|XP_004134800.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g16470 [Cucumis sativus])

HSP 1 Score: 669.1 bits (1725), Expect = 4.4e-189
Identity = 328/363 (90.36%), Postives = 345/363 (95.04%), Query Frame = 1 

Query: 1   MVVVGYVPNEYLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVG 60
           MVVVGYVPNEYLNTKLLILYAKSGDLETA +LHE+LLEKSLVSWNSLIAGYVQKGL EVG
Sbjct: 114 MVVVGYVPNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVG 173

Query: 61  LEFYFKMRQSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDM 120
           LEFY KMRQSG++PDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDM
Sbjct: 174 LEFYLKMRQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDM 233

Query: 121 YFKCSCLSDGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTF 180
           YFKCS LSDGHKAFNKSSNRNVITWTALISGYGQHGR  EVLESFHSMIN+GYRPNYVTF
Sbjct: 234 YFKCSSLSDGHKAFNKSSNRNVITWTALISGYGQHGRISEVLESFHSMINKGYRPNYVTF 293

Query: 181 LAVLVACGRGGFVPEAWRYFSLMTK-YGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAP 240
           LAVL AC RGGFV EAW YFSLMTK YGIEPRGQHYAAMADLLARAGRL+EAY+FVLDAP
Sbjct: 294 LAVLAACSRGGFVSEAWNYFSLMTKTYGIEPRGQHYAAMADLLARAGRLQEAYDFVLDAP 353

Query: 241 CKEHSVMWGALVGGCKVHEDIDLMRHAAANYFSLDPENSGKLVVFSNAFATTGLWDNVEE 300
           CKEHSVMWGALVG CKVHED+DLM+H AA+YF LDP+NSGKLVVFSNAFAT+GLWDNVEE
Sbjct: 354 CKEHSVMWGALVGACKVHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFATSGLWDNVEE 413

Query: 301 IRAMMKKSGMSKDPGYSRIEIQREFHFFVKSDKSHRQTDEIYRTINRITPILKDAGYIPQ 360
           IRAMMKKSGMSKDPG SRIEIQREFH FVK DKSHR+T+EIYRTI+RITPILKDAGYIP+
Sbjct: 414 IRAMMKKSGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEIYRTIDRITPILKDAGYIPE 473

Query: 361 VSE 363
           + E
Sbjct: 474 LCE 476

[Close]
BLAST of Cla014398 vs. NCBI nr
Match: gi|449434032|ref|XP_004134800.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g16470 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 1.9e-06
Identity = 42/180 (23.33%), Postives = 76/180 (42.22%), Query Frame = 1 

Query: 78  TFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSCLSDGHKAFNKS 137
           T+  +L+ C        GKR H  ++      N  +++ L+ +Y K   L   +      
Sbjct: 90  TYCLLLQECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKLLILYAKSGDLETAYVLHEHL 149

Query: 138 SNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVLVACGRGGFVPEAW 197
             +++++W +LI+GY Q G A   LE +  M   G  P+  TF +VL AC     +    
Sbjct: 150 LEKSLVSWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQYTFASVLRACASLASLEHGK 209

Query: 198 RYFSLMTKYGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAPCKEHSVMWGALVGGCKVH 257
           R   ++ K  I       +A+ D+  +   L + +    +     + + W AL+ G   H
Sbjct: 210 RAHGVLIKCQIGDNVVVSSALVDMYFKCSSLSDGHK-AFNKSSNRNVITWTALISGYGQH 268


HSP 2 Score: 661.8 bits (1706), Expect = 7.1e-187
Identity = 327/363 (90.08%), Postives = 341/363 (93.94%), Query Frame = 1 

Query: 1   MVVVGYVPNEYLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVG 60
           MVVVGYVPNEYLNTKLLILYAKSGDLETA ILHE+LLEKSLVSWNSLIAGYVQKGL EVG
Sbjct: 114 MVVVGYVPNEYLNTKLLILYAKSGDLETAYILHEHLLEKSLVSWNSLIAGYVQKGLAEVG 173

Query: 61  LEFYFKMRQSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDM 120
           LEFY KMRQSG++PDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDM
Sbjct: 174 LEFYLKMRQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDM 233

Query: 121 YFKCSCLSDGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTF 180
           YFKCS LSDGHKAFNKS NRNVITWTALISGYGQHGR  EVLESFHSMI EGYRPNYVTF
Sbjct: 234 YFKCSSLSDGHKAFNKSINRNVITWTALISGYGQHGRVSEVLESFHSMIKEGYRPNYVTF 293

Query: 181 LAVLVACGRGGFVPEAWRYFSLMTK-YGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAP 240
           L VL AC RGGFV EAWRYFSLMTK Y IEPRGQHYAAMADLLARAGRL EAYNFVLDAP
Sbjct: 294 LVVLAACSRGGFVSEAWRYFSLMTKTYEIEPRGQHYAAMADLLARAGRLREAYNFVLDAP 353

Query: 241 CKEHSVMWGALVGGCKVHEDIDLMRHAAANYFSLDPENSGKLVVFSNAFATTGLWDNVEE 300
           CKE+SVMWGALVG CKVHEDIDLM+H AA+YF LDPENSGKLVVFSNAFAT+GLWDNVEE
Sbjct: 354 CKENSVMWGALVGACKVHEDIDLMKHVAASYFELDPENSGKLVVFSNAFATSGLWDNVEE 413

Query: 301 IRAMMKKSGMSKDPGYSRIEIQREFHFFVKSDKSHRQTDEIYRTINRITPILKDAGYIPQ 360
           IRAMMKKSGMSKDPG S+IEIQREFH FVK+DKSHR+T+EIYRTI+RITPILKDAGY P+
Sbjct: 414 IRAMMKKSGMSKDPGCSKIEIQREFHIFVKNDKSHRETEEIYRTIDRITPILKDAGYTPE 473

Query: 361 VSE 363
           + E
Sbjct: 474 LCE 476

[Close]
BLAST of Cla014398 vs. NCBI nr
Match: gi|659079107|ref|XP_008440079.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g16470 [Cucumis melo])

HSP 1 Score: 62.0 bits (149), Expect = 2.5e-06
Identity = 42/180 (23.33%), Postives = 76/180 (42.22%), Query Frame = 1 

Query: 78  TFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSCLSDGHKAFNKS 137
           T+  +L+ C        GKR H  ++      N  +++ L+ +Y K   L   +      
Sbjct: 90  TYCLLLQECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKLLILYAKSGDLETAYILHEHL 149

Query: 138 SNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVLVACGRGGFVPEAW 197
             +++++W +LI+GY Q G A   LE +  M   G  P+  TF +VL AC     +    
Sbjct: 150 LEKSLVSWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQYTFASVLRACASLASLEHGK 209

Query: 198 RYFSLMTKYGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAPCKEHSVMWGALVGGCKVH 257
           R   ++ K  I       +A+ D+  +   L + +    +     + + W AL+ G   H
Sbjct: 210 RAHGVLIKCQIGDNVVVSSALVDMYFKCSSLSDGHK-AFNKSINRNVITWTALISGYGQH 268


HSP 2 Score: 521.2 bits (1341), Expect = 1.5e-144
Identity = 245/363 (67.49%), Postives = 304/363 (83.75%), Query Frame = 1 

Query: 1   MVVVGYVPNEYLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVG 60
           MVVVGYVPNEYL TKL+ILYAKSGDL+T  +L + L+EKSL+SWN+LIAGYVQKGL E+G
Sbjct: 146 MVVVGYVPNEYLKTKLMILYAKSGDLKTMHLLFDMLMEKSLISWNALIAGYVQKGLEEMG 205

Query: 61  LEFYFKMRQSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDM 120
           L FY++MRQ+G+ PDQYTFASV RACA+LA+LEHGKRAH V++KC + +NVVVSSAL+DM
Sbjct: 206 LSFYYEMRQNGLTPDQYTFASVFRACATLATLEHGKRAHCVMMKCFLKENVVVSSALMDM 265

Query: 121 YFKCSCLSDGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTF 180
           YFKCS LSDGH  F+KSSNRNV+TWT+LISGYG HGR  EV+ESFH M +EG++PNYVTF
Sbjct: 266 YFKCSSLSDGHLVFDKSSNRNVVTWTSLISGYGHHGRVSEVIESFHRMKDEGFQPNYVTF 325

Query: 181 LAVLVACGRGGFVPEAWRYFSLMTK-YGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAP 240
           LAVL AC  GG V E W YFS M + YGI+PRG+HYAAM DLL RAGRL+EAY FV++AP
Sbjct: 326 LAVLSACSHGGLVDEGWAYFSSMRRDYGIQPRGKHYAAMVDLLGRAGRLKEAYEFVVNAP 385

Query: 241 CKEHSVMWGALVGGCKVHEDIDLMRHAAANYFSLDPENSGKLVVFSNAFATTGLWDNVEE 300
           CKEHSV+WGAL+G CK+H D+DL+  AA  YF LDPEN+GK VV SNA+A  GLWD+V E
Sbjct: 386 CKEHSVLWGALLGACKIHGDMDLIELAARKYFELDPENAGKYVVLSNAYAAFGLWDSVAE 445

Query: 301 IRAMMKKSGMSKDPGYSRIEIQREFHFFVKSDKSHRQTDEIYRTINRITPILKDAGYIPQ 360
           +R +M+ + ++K+P YS IE+Q + HFF++ DKSHR+++EIY+TI  +  IL DAGY+P 
Sbjct: 446 VRGVMRDTEINKEPAYSSIEVQGKAHFFLQGDKSHRESEEIYKTIIEMIWILNDAGYVPD 505

Query: 361 VSE 363
           +S+
Sbjct: 506 LSD 508

[Close]
BLAST of Cla014398 vs. NCBI nr
Match: gi|566208029|ref|XP_006373596.1| (hypothetical protein POPTR_0016s01140g [Populus trichocarpa])

HSP 1 Score: 72.8 bits (177), Expect = 1.4e-09
Identity = 49/189 (25.93%), Postives = 83/189 (43.92%), Query Frame = 1 

Query: 69  QSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSCLS 128
           +SG+  D  T+A +L+ C        GKR H  ++      N  + + L+ +Y K   L 
Sbjct: 113 RSGLEVDHGTYALLLQECIFKKLYNKGKRIHAQMVVVGYVPNEYLKTKLMILYAKSGDLK 172

Query: 129 DGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVLVACG 188
             H  F+    +++I+W ALI+GY Q G     L  ++ M   G  P+  TF +V  AC 
Sbjct: 173 TMHLLFDMLMEKSLISWNALIAGYVQKGLEEMGLSFYYEMRQNGLTPDQYTFASVFRACA 232

Query: 189 RGGFVPEAWRYFSLMTKYGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAPCKEHSVMWG 248
               +    R   +M K  ++      +A+ D+  +   L + +  V D     + V W 
Sbjct: 233 TLATLEHGKRAHCVMMKCFLKENVVVSSALMDMYFKCSSLSDGH-LVFDKSSNRNVVTWT 292

Query: 249 ALVGGCKVH 258
           +L+ G   H
Sbjct: 293 SLISGYGHH 300


HSP 2 Score: 516.9 bits (1330), Expect = 2.8e-143
Identity = 247/362 (68.23%), Postives = 297/362 (82.04%), Query Frame = 1 

Query: 1   MVVVGYVPNEYLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVG 60
           M+VVGY P+EYL TKLLIL+AK+GDL+T+ IL ++L +KSL+SWN++IAGYVQKGL E G
Sbjct: 177 MIVVGYYPDEYLKTKLLILHAKTGDLDTSHILFDDLSKKSLISWNAMIAGYVQKGLEEEG 236

Query: 61  LEFYFKMRQSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDM 120
           L  Y +MRQSG+ PDQYTFASV RACA+LA+LE GK+AH V+IK QI +NVVV+SAL+DM
Sbjct: 237 LNLYDEMRQSGLTPDQYTFASVFRACATLATLEKGKQAHCVMIKSQIKENVVVNSALMDM 296

Query: 121 YFKCSCLSDGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTF 180
           YFKCS L DGH+ FNKS NRNVITWTALISGYGQHGR  EVL  F  M  EG+RPNYVTF
Sbjct: 297 YFKCSSLYDGHRVFNKSLNRNVITWTALISGYGQHGRVAEVLVFFSKMKTEGFRPNYVTF 356

Query: 181 LAVLVACGRGGFVPEAWRYFSLMTK-YGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAP 240
           LAV+ AC  GG V E W YF  MT+ YGI+PRGQHYAAM DLL RAGRL EA+ FV ++P
Sbjct: 357 LAVISACSHGGLVNEGWEYFMSMTRDYGIQPRGQHYAAMVDLLGRAGRLHEAFEFVQNSP 416

Query: 241 CKEHSVMWGALVGGCKVHEDIDLMRHAAANYFSLDPENSGKLVVFSNAFATTGLWDNVEE 300
           C EHSV+WGAL+G C+VH +ID++R AA  YF L+PEN+GK VV SNA+AT GLWDNV E
Sbjct: 417 CGEHSVIWGALLGACRVHGNIDMLRFAAKKYFDLEPENAGKYVVLSNAYATFGLWDNVAE 476

Query: 301 IRAMMKKSGMSKDPGYSRIEIQREFHFFVKSDKSHRQTDEIYRTINRITPILKDAGYIPQ 360
           +R +M++SGM KDPGYSRIE+QRE HFF+  DKSH+QT++IY  I  +T ILKDAGY+P 
Sbjct: 477 VRGVMRESGMRKDPGYSRIEVQREVHFFLMGDKSHKQTEQIYEVIKEVTCILKDAGYVPD 536

Query: 361 VS 362
           +S
Sbjct: 537 LS 538

[Close]
BLAST of Cla014398 vs. NCBI nr
Match: gi|731440563|ref|XP_010647234.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g16470-like isoform X1 [Vitis vinifera])

HSP 1 Score: 68.9 bits (167), Expect = 2.0e-08
Identity = 45/189 (23.81%), Postives = 86/189 (45.50%), Query Frame = 1 

Query: 69  QSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSCLS 128
           ++G+  +  T+A +L+ C      + G+R H  +I      +  + + L+ ++ K   L 
Sbjct: 144 RTGLQVEPATYALLLQECIFKKEFKTGRRIHAQMIVVGYYPDEYLKTKLLILHAKTGDLD 203

Query: 129 DGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTFLAVLVACG 188
             H  F+  S +++I+W A+I+GY Q G   E L  +  M   G  P+  TF +V  AC 
Sbjct: 204 TSHILFDDLSKKSLISWNAMIAGYVQKGLEEEGLNLYDEMRQSGLTPDQYTFASVFRACA 263

Query: 189 RGGFVPEAWRYFSLMTKYGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAPCKEHSVMWG 248
               + +  +   +M K  I+      +A+ D+  +   L + +  V +     + + W 
Sbjct: 264 TLATLEKGKQAHCVMIKSQIKENVVVNSALMDMYFKCSSLYDGHR-VFNKSLNRNVITWT 323

Query: 249 ALVGGCKVH 258
           AL+ G   H
Sbjct: 324 ALISGYGQH 331


HSP 2 Score: 515.8 bits (1327), Expect = 6.3e-143
Identity = 246/362 (67.96%), Postives = 297/362 (82.04%), Query Frame = 1 

Query: 1   MVVVGYVPNEYLNTKLLILYAKSGDLETACILHENLLEKSLVSWNSLIAGYVQKGLGEVG 60
           M+VVGY P+EYL TKLLIL+AK+GDL+T+ IL ++L +KSL+SWN++IAGYVQKGL E G
Sbjct: 117 MIVVGYYPDEYLKTKLLILHAKTGDLDTSHILFDDLSKKSLISWNAMIAGYVQKGLEEEG 176

Query: 61  LEFYFKMRQSGVLPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDM 120
           L  Y +MRQSG+ PDQYTFASV RACA+LA+LE GK+AH V+IK QI +NVVV+SAL+DM
Sbjct: 177 LNLYDEMRQSGLTPDQYTFASVFRACATLATLEKGKQAHCVMIKSQIKENVVVNSALMDM 236

Query: 121 YFKCSCLSDGHKAFNKSSNRNVITWTALISGYGQHGRAIEVLESFHSMINEGYRPNYVTF 180
           YFKCS L DGH+ FNKS NRNVITWTALISGYGQHGR  EVL  F  M  EG+RPNYVTF
Sbjct: 237 YFKCSSLYDGHRVFNKSLNRNVITWTALISGYGQHGRVAEVLVFFSKMKTEGFRPNYVTF 296

Query: 181 LAVLVACGRGGFVPEAWRYFSLMTK-YGIEPRGQHYAAMADLLARAGRLEEAYNFVLDAP 240
           LAV+ AC  GG V E W YF  MT+ YGI+PRGQHYAAM DLL RAGRL EA+ FV ++P
Sbjct: 297 LAVISACSHGGLVNEGWEYFMSMTRDYGIQPRGQHYAAMVDLLGRAGRLHEAFEFVQNSP 356

Query: 241 CKEHSVMWGALVGGCKVHEDIDLMRHAAANYFSLDPENSGKLVVFSNAFATTGLWDNVEE 300
           C EHSV+WGAL+G C+VH +ID++R AA  YF L+PEN+GK VV SNA+AT GLWDNV E
Sbjct: 357 CGEHSVIWGALLGACRVHGNIDMLRFAAKKYFDLEPENAGKYVVLSNAYATFGLWDNVAE 416

Query: 301 IRAMMKKSGMSKDPGYSRIEIQREFHFFVKSDKSHRQTDEIYRTINRITPILKDAGYIPQ 360
           +R +M++SGM KDPGYSRIE+QRE HFF+  DKSH+QT++IY  I  +T ILKDAGY+P 
Sbjct: 417 VRGVMRESGMRKDPGYSRIEVQREVHFFLMGDKSHKQTEQIYEVIKEVTCILKDAGYVPD 476

Query: 361 VS 362
           ++
Sbjct: 477 LT 478

The following BLAST results are available for this feature:
BLAST of Cla014398 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP315_ARATH1.3e-11655.71Pentatricopeptide repeat-containing protein At4g16470 OS=Arabidopsis thaliana GN... [more]
PP147_ARATH4.7e-7437.43Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... [more]
PP151_ARATH1.2e-7239.02Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN... [more]
PPR53_ARATH4.4e-7237.80Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN... [more]
PP251_ARATH7.5e-7238.64Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... [more]
BLAST of Cla014398 vs. TrEMBL
Match NameE-valueIdentityDescription
U5FJN2_POPTR1.0e-14467.49Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s01140g PE=4 SV=1[more]
U5FJN2_POPTR9.8e-1025.93Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s01140g PE=4 SV=1[more]
F6I2E4_VITVI1.4e-0823.81Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0592g00010 PE=3 SV=... [more]
M5X4D1_PRUPE2.3e-0624.04Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa018986mg PE=4 S... [more]
A0A061GHM4_THECC3.7e-0925.14Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_0303... [more]
BLAST of Cla014398 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449434032|ref|XP_004134800.1|4.4e-18990.36PREDICTED: pentatricopeptide repeat-containing protein At4g16470 [Cucumis sativu... [more]
gi|449434032|ref|XP_004134800.1|1.9e-0623.33PREDICTED: pentatricopeptide repeat-containing protein At4g16470 [Cucumis sativu... [more]
gi|659079107|ref|XP_008440079.1|2.5e-0623.33PREDICTED: pentatricopeptide repeat-containing protein At4g16470 [Cucumis melo][more]
gi|566208029|ref|XP_006373596.1|1.4e-0925.93hypothetical protein POPTR_0016s01140g [Populus trichocarpa][more]
gi|731440563|ref|XP_010647234.1|2.0e-0823.81PREDICTED: pentatricopeptide repeat-containing protein At4g16470-like isoform X1... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006230 TMP biosynthetic process
biological_process GO:0008150 biological_process
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0004797 thymidine kinase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU24853watermelon EST collection version 2.0transcribed_cluster
WMU48935watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla014398Cla014398.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU24853WMU24853transcribed_cluster
WMU48935WMU48935transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 40..87
score: 8.6E-10coord: 141..187
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 178..210
score: 4.8E-4coord: 143..176
score: 8.1E-6coord: 42..75
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 141..175
score: 11.794coord: 110..140
score: 5.02coord: 75..109
score: 5.492coord: 40..74
score: 10.983coord: 176..210
score: 9.898coord: 9..39
score: 6.007coord: 277..311
score: 6.215coord: 211..245
score:
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..318
score: 1.6E
NoneNo IPR availablePANTHERPTHR24015:SF484SUBFAMILY NOT NAMEDcoord: 1..318
score: 1.6E