CsGy6G032520 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G032520
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	pentatricopeptide repeat-containing protein At4g16470
Location	Chr6 : 29684153 .. 29693027 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTCATCGCCTTCACCAGATACTGCTTTACATTTCCTTTACCGTGACTTGTGCAACAAGCGTTTCAGTGTTTAACCCCCGCTTCCATCGAAGGTATACAATCGTTTTCTTTTTCTTCGTTTTTTCCGTTGATTCTCTGTTTAATTGGCGGTCCGGCGGGGAGATTCTGGCCGTCACCATCACTCTCTTCTTTTTATTTGTTTTTTTATTTTATTTTTTTATTTATAGTTATGGATAACTGTTTGTGAGTTTGACTTCTAATTTGGTGTTCGGTGAGTTTCTTTGGTTTCTCCAATTCTTCTTTGCTCTGTGTTCCAAATTTGACCAGCTGTTCTTTGGATTTCTAACTTTACTGCTCCGCGCTTTGGTTGATTTCTCGCGTTCACTGAAAAACTCGTGATGCATTCCTCTTCTTCTTTCTCTGACTCGTTGATTGTTTTTTATTTTTATTGAACGTGCTGCCTTTCAGGTAGGTACTAATTGACCAGGGACTTGGCTTTTTTGAGTTTCTGAATCGAAACTCGCAAAACTAGTTTTTGTGCCATCTGCTAATGTACTTGATTTGCTCAAACGGCGTGATTTTTTAGATTTATGTCCCTTGTTAGCTTTTTATCGAGTTGTGGCTATTTTATGGAGTATTCGTGTTGTCTTTTCTGGTAATTAGTTGTGTATTATGTGAAGAAATGGTGTTTCGAGTGAAAAATTTTGTGCTGATTTATCCAACCGTGATTTCTGGTGGTGATTGAAACGGAAGAGATCTTTTATCTTTCTAGTGAGCATATTGCCTTTTATTTCGTAATTTTTAAGGGGATACGGAAAACTTCTTCATTTTTTAAAAAAAATTATAGGCCGAAGATGTTGAAACGTTGTATTTTGACTCAATTCGTAGAAAGTTTCTTCTGAGAATTTGGGTTTTTTACCCTGTATTTGTGTTCATGCATGTTTGATGTGATAGTGTAGGATCTAATTTGTGGTTTCAATTTTGGACTCCGGCGCTTACTTGTATTGTTTGGTTCAACAATTTTAATTCTGTGGTATTGATTTTTGTTCTGTTATCTGCAGATTTTGGGGATTCTTCGATATTCCAGTTTTTACCGGTAAAGAAGGCAACTGCCTTAACTACTGCAGAGCATATAAGAATTTTGAGTCCTAAAATGTCTGCCTAGGAGTTGTTACTAGACTCCACTGAGCCCAAGTCCTGGAAACGCTTCTAATACCAACTGCTAGCGGTGAATATATTCTTGCTTTGGGCTCATTTCTGATTTCTTAATGCAAGCATCTCAGAATCGGCAGGCTTCATCTATGATCCATGAGATGGATCCGTACTATTTATCTGGTTTTCACGTATTGGGAAACCACGTCTCTCCTGACGCAAGCAGCCAGGGAAACAGTGTTAACTTCTCTTCCTATAAGGATCAGTTCTTTACTCTGGAATCATTCCCGGCTACTGCTGATCTGAGTGGCTCTAATTCTCCTTCTACTGGGAGTGTTCTGTCGTCTAGGAGCCCCTTCTCACCTCAGGGTTCTCAATCATGCTCATCAGATCAACACCATTCCTTTGAGAACACATGTGGATCACCAATGAGTGGATGCTCTGTAACTGATGAAGACAACGACATAAAGCACAAGCTTAAAGAATTAGAAATTTCTTTGCTGGGGCCTGAATCCGATATTGTGGATAGCTGCTACTGTTCTTTCAGGGGTGGGGCGCATCGAGATGCTTCAGTGGCAAGGCGGAACTGGAATCAAGTGGTTGAAATGATTCCTAAACTAAATCTTCAGGACACGCTTATCCATTGTGCCCAAGCAATTCATGATTCCGATCTAAATGTGGCAACACTTTTTATGGATGTTTTAGGGCAGATGGTTTCCGTCTCTGGCGACCCATCCCAGAGATTGGGAGCTTACTTGTTGGAAGGGCTTAGAGCAAGGTTGGAACGATCTGGGAGTGCAATATACAAATCCCTAAAGTGCAAAGAGCCAACAAGCTCTGAACTAATGTCATATATGTCTATTCTATTCCAGATCTGCCCGTACTTCAAATTTGGTTACACATCTGCTAATGCTGTAATTAGGGAGGCCATGGTCAATGAACCCATAATCCACATCATTGATTTTCAGATTGCTCAGGGTAGTCAGTATATATCTCTCATCCAGGATCTTGCCAATCGGCCCGGCGGACCCCCAGCTCTTCTTCGCATTACAGGTGTGGATGATTCCCAATCAGCTCATGCTCGAGGAGGGGGACTACAAATTGTGGGACAGAACTTAGCTCAGCTGGCTCAATCAAAAGGAATTCCCTTCCAATTTCATGCTGCTGCAATGTCCGGTTGTGACGTTGAACACAGTAATCTTATAATACAACCAGGAGAAGCATTGGCTGTAAATTTTCCATACACCTTACACCACATGCCAGATGAGAGCGTGAGCACACAGAATCATCGAGACCGGCTTCTTAGGCTGGTTAAAAGTCTCTCACCGAAAGTAGTAACCATTATTGAGCAGGAATCCAACACCAACACATCCCCATTCCTTCTTCGCTTCATAGAGACACTAGATTATTACACTGCTATGTTCGAGTCAATAGATGTAGCTCGTTCAAGAGATGACAAGCAGAGAATCAGGGCAGAGCAACACTGTGTGGCCCGAGACATAGTGAACATGGTAGCTTGTGAAGGGTTCGAAAGGGTAGAACGTCATGAACTCCTTGGCAAATGGAGGATGAGAATGAGAATGGCTGGTTTCACTCCATATACAATGAGCCCATCCGTTACTGGAGCTGTTAGAAATATGTTGAGAGATTTCAATGAGAACTACAGACTCCAAGAAGTTGATGGAGCTATCTACCTTGGATGGAAAAACAGAGCAATGGCAACCGCATCTGCATGGAGATGAAAGCTTTTAAAAGTCTGAATCCAATTGCGTAATTAGATCATGTAAAATTTTGCTCTCGAGCTTTCCTTTACAAGTAATTTTTAAGAGCCATGGAGCGATGGTAACCCATACAGATTTATAGAATGTGAGGTTAAAAAAAGCTCTTACTGTTCGTAGGAAGGATCCCAAATGTTGAAACCTGCTGTAAATTTTCTAACTTTGGCTAAAGAATTTTGTCCTCGTGTTAAAACACTATAGTTTATAAAGATAAATCGCATTATAGTATCTTATTACATTAATCACTCTATTTAATACCAGAAAGATGTGGTGCGTTTTGTTCGGATGTTCTAAGAATCTCTCTCCCTTAGTCTAATTTTGCACAAATGATTAAACGTTCGTACGATAAATTTAACTGATGTTTAGGTGTCAGAGAGCTGAAGGGTTAGATCTTTGCCGTAAATTTGTCTCTGACAGCTCTATCATTTCCATTTGTGTAAGGGAAAAAAAGCCTCTTCCTCCTCTTCCTCCTCTTCCAATTATCCTAAAATCAGGTACAATCAAAATGCTGGTTCTTTAAATTTTCTGATTAAGATCATGTTTCAGGTGTGTTAATTCTGTTTATTGTTCGTTTCATAAGGAATTTCATTAATTTCAATGGAAGGATGGGCAATGCAGAGGGAGAAAGAGCGAGAACGACGACGTATAAGGGACAGAGAAAGAAGATCGTCAATGAGCATTGAACAGAGAGAGAGGCATCTCGCAAGACGTCGTCGAAACTACCAAATACGAAGATTGAAATATCGAAATGGGAAAACCACAAATCCAAGCTTTTCTGGAACAAATTCATTTAAGGCGGTCTCAGAAACTTCCATTGCAGAGCTTGATCTGCAACAAAATGGGCTTATGCTCGTCGGTTTCAATCACGAACAAGAATCCTTAAATCCAGATTCCATAACGTCTTCCAGTAAGATCTGTTTTTTGAAGATACCAATATGGTGAGATGATTTTCTCTTGAGTTAATTTTCTTTCGGAATTTAATGAATAGGTTCTGAAATATTGGACCCAAGAGCTGAAATTCTCCAAGGGAGGGTACGTTTGAGTCATATTCGACGACTTGCACGTTCAATTGGGATTCACCAAATGTTTTCACAAGTAGAATCAACTTCCAATTGTAAGTCTGAGGATTCTAGCTTGGAATACGATCTTAATAGATCATCAAGATCGTTAAGGCGTGTCAAGCGTCTAGCGAGAATGATGAATTCATCTCTGAAACCATCTGCTGATGAATCTTCACAACATAAAACCACCATTGCAGGTTGTGCAAATTACTGAGCTTTATCCTCTCTTTTCAAACTTAGTTATGTGTTGGATTTACCTGTCTTGATGGATTAAATTGCAGGATAAAAAAAGGCCATGGGTTTTGTTTATAAAAAACCAATTGGTAAGGTGATAAGTAATTCATACAAGGTATCTTCGTCATTTGGGATTTCCAACAACAATCAAATCGTTGGTCTCCATTAATGAAATGTGATTCTAACGGGGATTTCACATCAGTTTGGTTGAATCTTTCTTATTAAAGGAAAGACAAGGGTACAAACATGCCCAAAAATGGAAGAAACAGAGGATGGCGGATCCGCTGGCTTGGCCTTTACAGGCGAGAGAGAAATTCAGAGTCTTCCAGCAAAAGAACAGAGAAGGAGGAGGATATTGTAACTTGTAAGATCATATACGTTGCACCATTGGTTGTGCAATTTTACTTACATGGAGGATTGAGGACATCACGAGTGAAAATTTGGAGGGTAGCAGGGATGGGGTTTAATATGCTTGTTTGAGCAGTTTACGTTGTTCTTGAAGGAATTAAAATTCAAAATTCTGGGTTTCTTCTTCTTTCCTTTTTGGAACATTTATAGTTGGGGTTTGGTTTCGTATGATTGGAGAATGAGAAATTGAGACATCAGTATTAAATTTTGATCTCTCATATGGTTTTAAAATCGACTCTATTGCTACATCAACCACAAAAGCAAAGAACCCTACACGAGGAGTCCTCTCCTCTTTCACTTCTCATTTTTCTCCATTTTTTTTATAGAAGAAGATACGCCCAACTCAAGTAACACATTTGTTGAGAAAGAAATATGGAATTAATCGATTGTGAACCAATTCAAAAGTGGATAGAAAAAAACGTGACCCATCTAATCGTCCCTCAAAAGAAAACGTATTTAGTATATTCGTTAGCTAAGTGACAATAAAACTATTTATAATATAAAGTAACAATCAAGTTTTATAGAAGTTTAGCCTTAGGGTTTAGGGTTAAACTGTTTTTGAAGTGTTAATCAGAAAGAAAGAAAGAATCTTGAACTGCCCCTGGTCGTTGGTGTCGCGAATGGCCTTCCATTTTGGAGCTTCCTTTATACGAACCTAAAACCTTCACCACTCAGCCGCTACACCTTCTCCTAATTCCCTTAAACCCCAACTTATCATTCCCTTCAATTCTCCATCCATCTCAATCCTTAATCCCTTCTCTTTCAACCACATGCTCAAATGTGCCTCTCCACTCACTCGCTCTTCTTTCTCCGCCGTGATTCATCTCATTTCCACGTCCATCGTACCCACTCAACTCCCCACTGTTCATCTCCCCCGCCGCCACAAATCTGAATTCGCCTCTCCCAGGTTCCTCTTTTTCTTCTTCATTTCTTAATTCAATGTTTAATCTTATATGCTCCCCGGCACAGTTCGTCTCTTTTACATTTCATAATTTCCTGCTTCGTACCGATATCCACATTTAATTTATCTGGCAATGCTTCCTTTTCAATTTAAGGTTTTGCATTTTTCTTGGTAATACTCTGCTTTGTTGTATAAAGAGTCCTCTTTTATTTCTCTTTAATTTGACGAACTTAAGTACTATCTCTTAGAAATTCCCAGCTTTCAGGTCAAGCCACACCACAAAGATACCTCATCCTGGGATAAAACGCTTAGGGGGCTATGTTTAACTGGGAAATTGGCGGAAGCTGTTGCACTTTTGTGCTGTATGGCCTTGCAATTTCACTCCAAAACTTACTGTCTTCTGCTACAAGAATGCATTTTCAGGAAAGAGTATATGAAAGGAAAAAGAATCCATGCCCAAATGGTTGTTGTTGGATATGTACCCAATGAATATCTCAACACCAAACTATTGATTTTATATGCCAAATCAGGTGACTTAGAGACTGCATACGTCCTTCATGAACATTTGTTGGAGAAAAGCCTGGTTTCATGGAATTCATTGATTGCCGGGTATGTACAGAAGGGGCTTGCTGAAGTTGGATTGGAGTTTTATTTAAAGATGAGACAAAGCGGTTTAATGCCTGATCAGTATACTTTTGCATCAGTTTTAAGAGCTTGTGCTAGTTTAGCTTCTCTGGAACACGGAAAGAGAGCACATGGAGTTTTGATTAAATGTCAAATTGGTGATAATGTTGTTGTGTCTAGTGCACTTGTAGATATGTACTTCAAATGCAGTAGCTTATCTGACGGGCATAAAGCATTTAACAAATCTTCAAATAGGAATGTAATCACTTGGACTGCTTTGATATCTGGGTATGGACAGCATGGAAGAATTTCTGAAGTTTTGGAATCATTTCATAGTATGATAAACAAAGGCTACCGGCCGAATTACGTCACTTTCCTTGCAGTTCTTGCTGCTTGTAGTCGTGGAGGCTTTGTGTCAGAGGCGTGGAATTACTTTTCTTTGATGACAAAGACCTATGGAATTGAACCAAGAGGGCAACATTATGCTGCCATGGCTGATCTTCTTGCCAGAGCTGGGAGATTGCAAGAAGCCTATGACTTTGTTCTTGATGCACCTTGCAAGGAGCACTCTGTTATGTGGGGTGCTTTGGTTGGAGCTTGTAAAGTTCATGAAGATGTAGATTTGATGAAACATGTTGCAGCAAGTTACTTCGAATTGGATCCTAAAAACTCAGGAAAGTTGGTTGTTTTCTCAAATGCTTTTGCCACATCCGGGTTGTGGGACAATGTTGAAGAGATAAGAGCTATGATGAAGAAATCAGGAATGAGTAAAGATCCTGGTTGCAGCAGAATAGAAATTCAAAGGGAATTCCATATTTTTGTCAAGGGCGATAAATCTCACAGAGAAACTGAGGAGATTTATAGAACCATTGACAGAATAACTCCAATTTTGAAGGATGCAGGATATATTCCTGAACTATGTGAAAAAACAGTGATAGAGGGATTAAGTTGGTGCTGAACTATACGAAACTGACGTTAAAATGTAGAAATGTCAATTAGAACACTCGTTGAAGTCCAAATTTTTGTAGTTTGAGGTTGTAGCAAGTTCACAATATATCACAATCTGATTAGTTTTGTTGGTTTCGTCCCATATGTTCTCAAAATAACATGATTACTCTGAGATGCACAAAGAGGTCAGGCTCTTGCACTACAAAGTGAAACGTGAAAAGGTGCGAAATTGTGAAGTAGGAGTTAGTTTGATGAGAGTCGTTGCCATGGGGTGAAACCGTGAGCTAACATTTTAACATATATGCAGTCGCAAGGTTTCATACTGCCAACTTGCCCAACTTACAGTAAGTTCTCCTCAATTGCGACTGGGGTGGGAGAAGTACTATAATTCATTCAACATAGAGAATTTCTCGTCGTTGGTGAGTTTACTAAACAAAGAACTGAATTTGATCATCTGTAAAACCAGTAAACAATATTTAATAGACCTATGTTGCAATTCAATTCCAATTCTATATAAACTGTACAACAATCCATGAGATTTCATAGAGACGTTCGGAAATGAAGTTTTATTATCAGTTGTCAATGAAGATAAAGCATCCGCTACATAGTGAGGCTTAGAACAAAAGTACATTATTATGATCTAACTTCCTAACCACAGCTTTCACAATCACATAAAGGTAAGATCAATGGAATCCGACTTCCTAACCACAGCTTTCACAAATCACATAAAGGTAAGATCAATGGAATCCGAATGCCAGCAGTCTCCAATGATGGTATGATGTTGATGTTATCCAGTTTCCACTTACAAGAATAACTGCAAAAGAGAAAAGCCAAAAGACAGAACAGAAGTACAAGAAAGAGAAGCCTCAGATCATCGGATTTGACAGCAAGGCTTGAAAAGCCATTCAGTCCCGAAAGATGGTATTTTGTTAACCGATATCATCATCAGCATATTACTAAAACACTATAAATAATAATGTAGGTCTCATGGCCAGTCCCAAGAAGTAAAGGCAGCAACGCTGCTCCACAAGGCAATGGAATATGATACCAACAGCCGATGGAGGTTCCAAACAGGAGCCATCGACATCGACTCTAATTTATTTGTGACGTTAACTCCGGCAATATACGAACATAACGTGTTCGCTCCATATCTAGTAAAGGATTGGATCTATAATCCCCCGCCACATAAAAACAATCAATTACACAACTTTTACAAGAGAGAAATTAAAATGTTTGTCTCATGGCCAGTCCAAGGTGGTAATTGCAGCGACGCTGCTCCACAAGGCGACGGAATATGAGACCACCCACAACGGAGAACATCCCTAAAAAGGGAAATCCATCAACATCGTTAGGAATTTTTTTACGACGTTTACTCGGAACTTTGCAGATATGGGACTAGTCTGCTTCCTTTTAGTAAGAGACTTCCTGGCAGAAGTTTCCCGTCGCATTTGAAGACATGATTAACAGAGACGAAAACTGTAATTCAAGATTAAGAATAATATATGAAGAAAGAATGGGAATGGGTGTATAAAAAGGAAAGGAAGAAGAGGTGGGAGGAGAAAGAAGGAGAAAGAAGGAGAGGGCGGTGGAGTTAGAATAAATAGGAGAGGTTTAGGGTTTTATGTTATAGAAAGAAATGTGTAGGGCTACACAGTGGCATGGGGCGGGGGGGTTAGAATCGTAAATGATTCAACATTTTTAATTCACATTAATTCCTTTATTTTATAATAAAATTACTTACACCCTATATATATATATATATATTTT

mRNA sequence

TTTGTCATCGCCTTCACCAGATACTGCTTTACATTTCCTTTACCGTGACTTGTGCAACAAGCGTTTCAGTGTTTAACCCCCGCTTCCATCGAAGATTTTGGGGATTCTTCGATATTCCAGTTTTTACCGGTAAAGAAGGCAACTGCCTTAACTACTGCAGAGCATATAAGAATTTTGAGTCCTAAAATGTCTGCCTAGGAGTTGTTACTAGACTCCACTGAGCCCAAGTCCTGGAAACGCTTCTAATACCAACTGCTAGCGGTGAATATATTCTTGCTTTGGGCTCATTTCTGATTTCTTAATGCAAGCATCTCAGAATCGGCAGGCTTCATCTATGATCCATGAGATGGATCCGTACTATTTATCTGGTTTTCACGTATTGGGAAACCACGTCTCTCCTGACGCAAGCAGCCAGGGAAACAGTGTTAACTTCTCTTCCTATAAGGATCAGTTCTTTACTCTGGAATCATTCCCGGCTACTGCTGATCTGAGTGGCTCTAATTCTCCTTCTACTGGGAGTGTTCTGTCGTCTAGGAGCCCCTTCTCACCTCAGGGTTCTCAATCATGCTCATCAGATCAACACCATTCCTTTGAGAACACATGTGGATCACCAATGAGTGGATGCTCTGTAACTGATGAAGACAACGACATAAAGCACAAGCTTAAAGAATTAGAAATTTCTTTGCTGGGGCCTGAATCCGATATTGTGGATAGCTGCTACTGTTCTTTCAGGGGTGGGGCGCATCGAGATGCTTCAGTGGCAAGGCGGAACTGGAATCAAGTGGTTGAAATGATTCCTAAACTAAATCTTCAGGACACGCTTATCCATTGTGCCCAAGCAATTCATGATTCCGATCTAAATGTGGCAACACTTTTTATGGATGTTTTAGGGCAGATGGTTTCCGTCTCTGGCGACCCATCCCAGAGATTGGGAGCTTACTTGTTGGAAGGGCTTAGAGCAAGGTTGGAACGATCTGGGAGTGCAATATACAAATCCCTAAAGTGCAAAGAGCCAACAAGCTCTGAACTAATGTCATATATGTCTATTCTATTCCAGATCTGCCCGTACTTCAAATTTGGTTACACATCTGCTAATGCTGTAATTAGGGAGGCCATGGTCAATGAACCCATAATCCACATCATTGATTTTCAGATTGCTCAGGGTAGTCAGTATATATCTCTCATCCAGGATCTTGCCAATCGGCCCGGCGGACCCCCAGCTCTTCTTCGCATTACAGGTGTGGATGATTCCCAATCAGCTCATGCTCGAGGAGGGGGACTACAAATTGTGGGACAGAACTTAGCTCAGCTGGCTCAATCAAAAGGAATTCCCTTCCAATTTCATGCTGCTGCAATGTCCGGTTGTGACGTTGAACACAGTAATCTTATAATACAACCAGGAGAAGCATTGGCTGTAAATTTTCCATACACCTTACACCACATGCCAGATGAGAGCGTGAGCACACAGAATCATCGAGACCGGCTTCTTAGGCTGGTTAAAAGTCTCTCACCGAAAGTAGTAACCATTATTGAGCAGGAATCCAACACCAACACATCCCCATTCCTTCTTCGCTTCATAGAGACACTAGATTATTACACTGCTATGTTCGAGTCAATAGATGTAGCTCGTTCAAGAGATGACAAGCAGAGAATCAGGGCAGAGCAACACTGTGTGGCCCGAGACATAGTGAACATGGTAGCTTGTGAAGGGTTCGAAAGGGTAGAACGTCATGAACTCCTTGGCAAATGGAGGATGAGAATGAGAATGGCTGGTTTCACTCCATATACAATGAGCCCATCCGTTACTGGAGCTGTTAGAAATATGTTGAGAGATTTCAATGAGAACTACAGACTCCAAGAAGTTGATGGAGCTATCTACCTTGGATGGAAAAACAGAGCAATGGCAACCGCATCTGCATGGAGATGAAAGCTTTTAAAAGTCTGAATCCAATTGCGTAATTAGATCATGTAAAATTTTGCTCTCGAGCTTTCCTTTACAAGTAATTTTTAAGAGCCATGGAGCGATGGTAACCCATACAGATTTATAGAATGTGAGGTTAAAAAAAGCTCTTACTGTTCGTAGGAAGGATCCCAAATGTTGAAACCTGCTGTAAATTTTCTAACTTTGGCTAAAGAATTTTGTCCTCGTGTTAAAACACTATAGTTTATAAAGATAAATCGCATTATAGTATCTTATTACATTAATCACTCTATTTAATACCAGAAAGATGTGGTGCGTTTTGTTCGGATGTTCTAAGAATCTCTCTCCCTTAGTCTAATTTTGCACAAATGATTAAACGTTCGTACGATAAATTTAACTGATGTTTAGGTGTCAGAGAGCTGAAGGGTTAGATCTTTGCCGTAAATTTGTCTCTGACAGCTCTATCATTTCCATTTGTGTAAGGGAAAAAAAGCCTCTTCCTCCTCTTCCTCCTCTTCCAATTATCCTAAAATCAGGAATTTCATTAATTTCAATGGAAGGATGGGCAATGCAGAGGGAGAAAGAGCGAGAACGACGACGTATAAGGGACAGAGAAAGAAGATCGTCAATGAGCATTGAACAGAGAGAGAGGCATCTCGCAAGACGTCGTCGAAACTACCAAATACGAAGATTGAAATATCGAAATGGGAAAACCACAAATCCAAGCTTTTCTGGAACAAATTCATTTAAGGCGGTCTCAGAAACTTCCATTGCAGAGCTTGATCTGCAACAAAATGGGCTTATGCTCGTCGGTTTCAATCACGAACAAGAATCCTTAAATCCAGATTCCATAACGTCTTCCAGTTCTGAAATATTGGACCCAAGAGCTGAAATTCTCCAAGGGAGGGTACGTTTGAGTCATATTCGACGACTTGCACGTTCAATTGGGATTCACCAAATGTTTTCACAAGTAGAATCAACTTCCAATTGTAAGTCTGAGGATTCTAGCTTGGAATACGATCTTAATAGATCATCAAGATCGTTAAGGCGTGTCAAGCGTCTAGCGAGAATGATGAATTCATCTCTGAAACCATCTGCTGATGAATCTTCACAACATAAAACCACCATTGCAGGATAAAAAAAGGCCATGGGTTTTGTTTATAAAAAACCAATTGGTAAGGTGATAAGTAATTCATACAAGGTATCTTCGTCATTTGGGATTTCCAACAACAATCAAATCGTTGGTCTCCATTAATGAAATGTGATTCTAACGGGGATTTCACATCAGTTTGGTTGAATCTTTCTTATTAAAGGAAAGACAAGGGTACAAACATGCCCAAAAATGGAAGAAACAGAGGATGGCGGATCCGCTGGCTTGGCCTTTACAGGCGAGAGAGAAATTCAGAGTCTTCCAGCAAAAGAACAGAGAAGGAGGAGGATATTGTAACTTGTAAGATCATATACGTTGCACCATTGGTTGTGCAATTTTACTTACATGGAGGATTGAGGACATCACGAGTGAAAATTTGGAGGGTAGCAGGGATGGGGTTTAATATGCTTGTTTGAGCAGTTTACGTTGTTCTTGAAGGAATTAAAATTCAAAATTCTGGGTTTCTTCTTCTTTCCTTTTTGGAACATTTATAGTTGGGGTTTGGTTTCGTATGATTGGAGAATGAGAAATTGAGACATCAGTATTAAATTTTGATCTCTCATATGGTTTTAAAATCGACTCTATTGCTACATCAACCACAAAAGCAAAGAACCCTACACGAGGAGTCCTCTCCTCTTTCACTTCTCATTTTTCTCCATTTTTTTTATAGAAGAAGATACGCCCAACTCAAGTAACACATTTGTTGAGAAAGAAATATGGAATTAATCGATTGTGAACCAATTCAAAAGTGGATAGAAAAAAACGTGACCCATCTAATCGTCCCTCAAAAGAAAACGTATTTAGTATATTCGTTAGCTAAGTGACAATAAAACTATTTATAATATAAAGTAACAATCAAGTTTTATAGAAGTTTAGCCTTAGGGTTTAGGGTTAAACTGTTTTTGAAGTGTTAATCAGAAAGAAAGAAAGAATCTTGAACTGCCCCTGGTCGTTGGTGTCGCGAATGGCCTTCCATTTTGGAGCTTCCTTTATACGAACCTAAAACCTTCACCACTCAGCCGCTACACCTTCTCCTAATTCCCTTAAACCCCAACTTATCATTCCCTTCAATTCTCCATCCATCTCAATCCTTAATCCCTTCTCTTTCAACCACATGCTCAAATGTGCCTCTCCACTCACTCGCTCTTCTTTCTCCGCCGTGATTCATCTCATTTCCACGTCCATCGTACCCACTCAACTCCCCACTGTTCATCTCCCCCGCCGCCACAAATCTGAATTCGCCTCTCCCAGCTTTCAGGTCAAGCCACACCACAAAGATACCTCATCCTGGGATAAAACGCTTAGGGGGCTATGTTTAACTGGGAAATTGGCGGAAGCTGTTGCACTTTTGTGCTGTATGGCCTTGCAATTTCACTCCAAAACTTACTGTCTTCTGCTACAAGAATGCATTTTCAGGAAAGAGTATATGAAAGGAAAAAGAATCCATGCCCAAATGGTTGTTGTTGGATATGTACCCAATGAATATCTCAACACCAAACTATTGATTTTATATGCCAAATCAGGTGACTTAGAGACTGCATACGTCCTTCATGAACATTTGTTGGAGAAAAGCCTGGTTTCATGGAATTCATTGATTGCCGGGTATGTACAGAAGGGGCTTGCTGAAGTTGGATTGGAGTTTTATTTAAAGATGAGACAAAGCGGTTTAATGCCTGATCAGTATACTTTTGCATCAGTTTTAAGAGCTTGTGCTAGTTTAGCTTCTCTGGAACACGGAAAGAGAGCACATGGAGTTTTGATTAAATGTCAAATTGGTGATAATGTTGTTGTGTCTAGTGCACTTGTAGATATGTACTTCAAATGCAGTAGCTTATCTGACGGGCATAAAGCATTTAACAAATCTTCAAATAGGAATGTAATCACTTGGACTGCTTTGATATCTGGGTATGGACAGCATGGAAGAATTTCTGAAGTTTTGGAATCATTTCATAGTATGATAAACAAAGGCTACCGGCCGAATTACGTCACTTTCCTTGCAGTTCTTGCTGCTTGTAGTCGTGGAGGCTTTGTGTCAGAGGCGTGGAATTACTTTTCTTTGATGACAAAGACCTATGGAATTGAACCAAGAGGGCAACATTATGCTGCCATGGCTGATCTTCTTGCCAGAGCTGGGAGATTGCAAGAAGCCTATGACTTTGTTCTTGATGCACCTTGCAAGGAGCACTCTGTTATGTGGGGTGCTTTGGTTGGAGCTTGTAAAGTTCATGAAGATGTAGATTTGATGAAACATGTTGCAGCAAGTTACTTCGAATTGGATCCTAAAAACTCAGGAAAGTTGGTTGTTTTCTCAAATGCTTTTGCCACATCCGGGTTGTGGGACAATGTTGAAGAGATAAGAGCTATGATGAAGAAATCAGGAATGAGTAAAGATCCTGGTTGCAGCAGAATAGAAATTCAAAGGGAATTCCATATTTTTGTCAAGGGCGATAAATCTCACAGAGAAACTGAGGAGATTTATAGAACCATTGACAGAATAACTCCAATTTTGAAGGATGCAGGATATATTCCTGAACTATGTGAAAAAACAGTGATAGAGGGATTAAGTTGGTGCTGAACTATACGAAACTGACGTTAAAATGTAGAAATGTCAATTAGAACACTCGTTGAAGTCCAAATTTTTGTAGTTTGAGGTTGTAGCAAGTTCACAATATATCACAATCTGATTAGTTTTGTTGGTTTCGTCCCATATGTTCTCAAAATAACATGATTACTCTGAGATGCACAAAGAGGTCAGGCTCTTGCACTACAAAGTGAAACGTGAAAAGGTGCGAAATTGTGAAGTAGGAGTTAGTTTGATGAGAGTCGTTGCCATGGGGTGAAACCGTGAGCTAACATTTTAACATATATGCAGTCGCAAGGTTTCATACTGCCAACTTGCCCAACTTACAGTAAGTTCTCCTCAATTGCGACTGGGGTGGGAGAAGTACTATAATTCATTCAACATAGAGAATTTCTCGTCGTTGGTGAGTTTACTAAACAAAGAACTGAATTTGATCATCTGTAAAACCAGTAAACAATATTTAATAGACCTATGTTGCAATTCAATTCCAATTCTATATAAACTGTACAACAATCCATGAGATTTCATAGAGACGTTCGGAAATGAAGTTTTATTATCAGTTGTCAATGAAGATAAAGCATCCGCTACATAGTGAGGCTTAGAACAAAAGTACATTATTATGATCTAACTTCCTAACCACAGCTTTCACAATCACATAAAGGTAAGATCAATGGAATCCGAATGCCAGCAGTCTCCAATGATGGTATGATGTTGATGTTATCCAGTTTCCACTTACAAGAATAACTGCAAAAGAGAAAAGCCAAAAGACAGAACAGAAGTACAAGAAAGAGAAGCCTCAGATCATCGGATTTGACAGCAAGGCTTGAAAAGCCATTCAGTCCCGAAAGATGGTATTTTGTTAACCGATATCATCATCAGCATATTACTAAAACACTATAAATAATAATGTAGGTCTCATGGCCAGTCCCAAGAAGTAAAGGCAGCAACGCTGCTCCACAAGGCAATGGAATATGATACCAACAGCCGATGGAGGTTCCAAACAGGAGCCATCGACATCGACTCTAATTTATTTGTGACGTTAACTCCGGCAATATACGAACATAACGTGTTCGCTCCATATCTAGTAAAGGATTGGATCTATAATCCCCCGCCACATAAAAACAATCAATTACACAACTTTTACAAGAGAGAAATTAAAATGTTTGTCTCATGGCCAGTCCAAGGTGGTAATTGCAGCGACGCTGCTCCACAAGGCGACGGAATATGAGACCACCCACAACGGAGAACATCCCTAAAAAGGGAAATCCATCAACATCGTTAGGAATTTTTTTACGACGTTTACTCGGAACTTTGCAGATATGGGACTAGTCTGCTTCCTTTTAGTAAGAGACTTCCTGGCAGAAGTTTCCCGTCGCATTTGAAGACATGATTAACAGAGACGAAAACTGTAATTCAAGATTAAGAATAATATATGAAGAAAGAATGGGAATGGGTGTATAAAAAGGAAAGGAAGAAGAGGTGGGAGGAGAAAGAAGGAGAAAGAAGGAGAGGGCGGTGGAGTTAGAATAAATAGGAGAGGTTTAGGGTTTTATGTTATAGAAAGAAATGTGTAGGGCTACACAGTGGCATGGGGCGGGGGGGTTAGAATCGTAAATGATTCAACATTTTTAATTCACATTAATTCCTTTATTTTATAATAAAATTACTTACACCCTATATATATATATATATATTTT

Coding sequence (CDS)

ATGCTCAAATGTGCCTCTCCACTCACTCGCTCTTCTTTCTCCGCCGTGATTCATCTCATTTCCACGTCCATCGTACCCACTCAACTCCCCACTGTTCATCTCCCCCGCCGCCACAAATCTGAATTCGCCTCTCCCAGCTTTCAGGTCAAGCCACACCACAAAGATACCTCATCCTGGGATAAAACGCTTAGGGGGCTATGTTTAACTGGGAAATTGGCGGAAGCTGTTGCACTTTTGTGCTGTATGGCCTTGCAATTTCACTCCAAAACTTACTGTCTTCTGCTACAAGAATGCATTTTCAGGAAAGAGTATATGAAAGGAAAAAGAATCCATGCCCAAATGGTTGTTGTTGGATATGTACCCAATGAATATCTCAACACCAAACTATTGATTTTATATGCCAAATCAGGTGACTTAGAGACTGCATACGTCCTTCATGAACATTTGTTGGAGAAAAGCCTGGTTTCATGGAATTCATTGATTGCCGGGTATGTACAGAAGGGGCTTGCTGAAGTTGGATTGGAGTTTTATTTAAAGATGAGACAAAGCGGTTTAATGCCTGATCAGTATACTTTTGCATCAGTTTTAAGAGCTTGTGCTAGTTTAGCTTCTCTGGAACACGGAAAGAGAGCACATGGAGTTTTGATTAAATGTCAAATTGGTGATAATGTTGTTGTGTCTAGTGCACTTGTAGATATGTACTTCAAATGCAGTAGCTTATCTGACGGGCATAAAGCATTTAACAAATCTTCAAATAGGAATGTAATCACTTGGACTGCTTTGATATCTGGGTATGGACAGCATGGAAGAATTTCTGAAGTTTTGGAATCATTTCATAGTATGATAAACAAAGGCTACCGGCCGAATTACGTCACTTTCCTTGCAGTTCTTGCTGCTTGTAGTCGTGGAGGCTTTGTGTCAGAGGCGTGGAATTACTTTTCTTTGATGACAAAGACCTATGGAATTGAACCAAGAGGGCAACATTATGCTGCCATGGCTGATCTTCTTGCCAGAGCTGGGAGATTGCAAGAAGCCTATGACTTTGTTCTTGATGCACCTTGCAAGGAGCACTCTGTTATGTGGGGTGCTTTGGTTGGAGCTTGTAAAGTTCATGAAGATGTAGATTTGATGAAACATGTTGCAGCAAGTTACTTCGAATTGGATCCTAAAAACTCAGGAAAGTTGGTTGTTTTCTCAAATGCTTTTGCCACATCCGGGTTGTGGGACAATGTTGAAGAGATAAGAGCTATGATGAAGAAATCAGGAATGAGTAAAGATCCTGGTTGCAGCAGAATAGAAATTCAAAGGGAATTCCATATTTTTGTCAAGGGCGATAAATCTCACAGAGAAACTGAGGAGATTTATAGAACCATTGACAGAATAACTCCAATTTTGAAGGATGCAGGATATATTCCTGAACTATGTGAAAAAACAGTGATAGAGGGATTAAGTTGGTGCTGA

Protein sequence

MLKCASPLTRSSFSAVIHLISTSIVPTQLPTVHLPRRHKSEFASPSFQVKPHHKDTSSWDKTLRGLCLTGKLAEAVALLCCMALQFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSLSDGHKAFNKSSNRNVITWTALISGYGQHGRISEVLESFHSMINKGYRPNYVTFLAVLAACSRGGFVSEAWNYFSLMTKTYGIEPRGQHYAAMADLLARAGRLQEAYDFVLDAPCKEHSVMWGALVGACKVHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFATSGLWDNVEEIRAMMKKSGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEIYRTIDRITPILKDAGYIPELCEKTVIEGLSWC

Homology

[Close]

BLAST of CsGy6G032520 vs. NCBI nr
Match: XP_004134800.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g16470 [Cucumis sativus] >KGN49049.1 hypothetical protein Csa_6G511640 [Cucumis sativus])

HSP 1 Score: 894.8 bits (2311), Expect = 1.3e-256
Identity = 486/486 (100.00%), Postives = 486/486 (100.00%), Query Frame = 0


Query: 1   MLKCASPLTRSSFSAVIHLISTSIVPTQLPTVHLPRRHKSEFASPSFQVKPHHKDTSSWD 60
           MLKCASPLTRSSFSAVIHLISTSIVPTQLPTVHLPRRHKSEFASPSFQVKPHHKDTSSWD
Sbjct: 1   MLKCASPLTRSSFSAVIHLISTSIVPTQLPTVHLPRRHKSEFASPSFQVKPHHKDTSSWD 60

Query: 61  KTLRGLCLTGKLAEAVALLCCMALQFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYV 120
           KTLRGLCLTGKLAEAVALLCCMALQFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYV
Sbjct: 61  KTLRGLCLTGKLAEAVALLCCMALQFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYV 120

Query: 121 PNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKM 180
           PNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKM
Sbjct: 121 PNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKM 180

Query: 181 RQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSL 240
           RQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSL
Sbjct: 181 RQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSL 240

Query: 241 SDGHKAFNKSSNRNVITWTALISGYGQHGRISEVLEXXXXXXXXXXXXXXXXXXXXXXXX 300
           SDGHKAFNKSSNRNVITWTALISGYGQHGRISEVLEXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 SDGHKAFNKSSNRNVITWTALISGYGQHGRISEVLEXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXSLMTKTYGIEPRGQHYAAMADLLARAGRLQEAYDFVLDAPCKEHSVM 360
           XXXXXXXXXXXXXSLMTKTYGIEPRGQHYAAMADLLARAGRLQEAYDFVLDAPCKEHSVM
Sbjct: 301 XXXXXXXXXXXXXSLMTKTYGIEPRGQHYAAMADLLARAGRLQEAYDFVLDAPCKEHSVM 360

Query: 361 WGALVGACKVHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFATSGLWDNVEEIRAMMKK 420
           WGALVGACKVHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFATSGLWDNVEEIRAMMKK
Sbjct: 361 WGALVGACKVHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFATSGLWDNVEEIRAMMKK 420

Query: 421 SGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEIYRTIDRITPILKDAGYIPELCEKTVI 480
           SGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEIYRTIDRITPILKDAGYIPELCEKTVI
Sbjct: 421 SGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEIYRTIDRITPILKDAGYIPELCEKTVI 480

Query: 481 EGLSWC 487
           EGLSWC
Sbjct: 481 EGLSWC 486

[Close]

BLAST of CsGy6G032520 vs. NCBI nr
Match: XP_008440079.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g16470 [Cucumis melo])

HSP 1 Score: 824.7 bits (2129), Expect = 1.6e-235
Identity = 414/477 (86.79%), Postives = 425/477 (89.10%), Query Frame = 0


Query: 1   MLKCASPLTRSSFSAVIHLISTSIVPTQLPTVHLPRRHKSEFASPSFQVKPHHKDTSSWD 60
           MLKCASPLTRSSFSAVIHL + SIV TQ P VH PRRH+SE A PSFQVK HHKD SSWD
Sbjct: 1   MLKCASPLTRSSFSAVIHLFTKSIVATQFPIVHFPRRHESESACPSFQVKRHHKDNSSWD 60

Query: 61  KTLRGLCLTGKLAEAVALLCCMALQFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYV 120
           +TLRGLCLTGKLAEAVALLCCMALQF SKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYV
Sbjct: 61  ETLRGLCLTGKLAEAVALLCCMALQFQSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYV 120

Query: 121 PNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKM 180
           PNEYLNTKLLILYAKSGDLETAY+LHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKM
Sbjct: 121 PNEYLNTKLLILYAKSGDLETAYILHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKM 180

Query: 181 RQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSL 240
           RQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSL
Sbjct: 181 RQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSL 240

Query: 241 SDGHKAFNKSSNRNVITWTALISGYGQHGRISEVLEXXXXXXXXXXXXXXXXXXXXXXXX 300
           SDGHKAFNKS NRNVITWTALISGYGQHGR+SEVLE                        
Sbjct: 241 SDGHKAFNKSINRNVITWTALISGYGQHGRVSEVLESFHSMIKEGYRPNYVTFLVVLAAC 300

Query: 301 XXXXXXXXXXXXXSLMTKTYGIEPRGQHYAAMADLLARAGRLQEAYDFVLDAPCKEHSVM 360
                        SLMTKTY IEPRGQHYAAMADLLARAGRL+EAY+FVLDAPCKE+SVM
Sbjct: 301 SRGGFVSEAWRYFSLMTKTYEIEPRGQHYAAMADLLARAGRLREAYNFVLDAPCKENSVM 360

Query: 361 WGALVGACKVHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFATSGLWDNVEEIRAMMKK 420
           WGALVGACKVHED+DLMKHVAASYFELDP+NSGKLVVFSNAFATSGLWDNVEEIRAMMKK
Sbjct: 361 WGALVGACKVHEDIDLMKHVAASYFELDPENSGKLVVFSNAFATSGLWDNVEEIRAMMKK 420

Query: 421 SGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEIYRTIDRITPILKDAGYIPELCEK 478
           SGMSKDPGCS+IEIQREFHIFVK DKSHRETEEIYRTIDRITPILKDAGY PELCEK
Sbjct: 421 SGMSKDPGCSKIEIQREFHIFVKNDKSHRETEEIYRTIDRITPILKDAGYTPELCEK 477

[Close]

BLAST of CsGy6G032520 vs. NCBI nr
Match: XP_023003064.1 (pentatricopeptide repeat-containing protein At4g16470 [Cucurbita maxima])

HSP 1 Score: 681.0 bits (1756), Expect = 2.9e-192
Identity = 366/467 (78.37%), Postives = 396/467 (84.80%), Query Frame = 0


Query: 10  RSSFSAVIHLISTSIVPTQLPTVHLPRRHKSEFASPSFQVKPHHKDTSSWDKTLRGLCLT 69
           RSS S VIHL + SIV     T+   RRHKSE+A+   QVKPH KD+SSWD+T R LC+T
Sbjct: 6   RSSSSGVIHLFTKSIVAGATATIR--RRHKSEYANDRSQVKPHQKDSSSWDRTFRSLCIT 65

Query: 70  GKLAEAVALLCCMALQFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKL 129
           G+L+EAVALLC M  QFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVG++PNEYL TKL
Sbjct: 66  GRLSEAVALLCSMPFQFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGHLPNEYLKTKL 125

Query: 130 LILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQ 189
           LILYAK GDLETAY+LHE LL+ SLVSWN+LIAG VQKGL EVGLE Y KMR++GL+PDQ
Sbjct: 126 LILYAKLGDLETAYILHEKLLDNSLVSWNALIAGCVQKGLGEVGLELYFKMRRTGLIPDQ 185

Query: 190 YTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSLSDGHKAFNK 249
           YTFASV+RACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSS+SDGHK F+K
Sbjct: 186 YTFASVIRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSISDGHKVFDK 245

Query: 250 SSNRNVITWTALISGYGQHGRISEVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 309
           SS RNVITWTALISGYG HGR+SEVLE          XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 246 SSTRNVITWTALISGYGHHGRVSEVLESFNSMINEGYXXXXXXXXXXXXXXXXXXXXXXX 305

Query: 310 XXXXSLMTKTYGIEPRGQHYAAMADLLARAGRLQEAYDFVLDAPCKEHSVMWGALVGACK 369
               SLM  TY IEPRGQHYAAMADLLARAGRLQEAYDFV+DAPCKEHSV+WGALVG CK
Sbjct: 306 WRYLSLMKTTYEIEPRGQHYAAMADLLARAGRLQEAYDFVVDAPCKEHSVIWGALVGGCK 365

Query: 370 VHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFATSGLWDNVEEIRAMMKKSGMSKDPGC 429
           VHED+DLMKH AA Y  LD  N+GK VV +N FA SGLWDNV EIR MMKKSGM+K+PG 
Sbjct: 366 VHEDIDLMKHAAAHYLALDASNAGKYVVLANGFAASGLWDNVAEIRCMMKKSGMNKEPGY 425

Query: 430 SRIEIQREFHIFVKGDKSHRETEEIYRTIDRITPILKDAGYIPELCE 477
           SRIEIQREFH FVK DKSH++  EIYRTI  ITPILKDAG IPEL E
Sbjct: 426 SRIEIQREFHFFVKSDKSHKQAVEIYRTIHSITPILKDAGSIPELSE 470

[Close]

BLAST of CsGy6G032520 vs. NCBI nr
Match: XP_022926503.1 (pentatricopeptide repeat-containing protein At4g16470 [Cucurbita moschata])

HSP 1 Score: 677.6 bits (1747), Expect = 3.2e-191
Identity = 371/470 (78.94%), Postives = 403/470 (85.74%), Query Frame = 0


Query: 10  RSSFSAVIHLISTSIVPTQLPTVHLPRRHKSEFASPSFQVKPHHKDTSSWDKTLRGLCLT 69
           R S S VIHL + SIV     T+   RRHKSE+A+  FQVKPH KD+SSWD+T R LC+T
Sbjct: 6   RPSSSGVIHLFTKSIVAGATATIR--RRHKSEYANDRFQVKPHQKDSSSWDRTFRSLCIT 65

Query: 70  GKLAEAVALLCCMALQFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKL 129
           G+L EAVALLCCM  QFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVG++PNEYL TKL
Sbjct: 66  GRLTEAVALLCCMPFQFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGHLPNEYLKTKL 125

Query: 130 LILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQ 189
           LILYAK GDLETA +LHE LLE SLVSWN+LIAGYVQKG  EVGLE Y KMR++GL+PDQ
Sbjct: 126 LILYAKLGDLETANILHEKLLENSLVSWNALIAGYVQKGFGEVGLELYFKMRRTGLIPDQ 185

Query: 190 YTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSLSDGHKAFNK 249
           YTFASV RACASLASLEHGKRAHGVLIKC+IGDNVVVSSALVDMYFKCSS+ DGHK FNK
Sbjct: 186 YTFASVFRACASLASLEHGKRAHGVLIKCRIGDNVVVSSALVDMYFKCSSILDGHKVFNK 245

Query: 250 SSNRNVITWTALISGYGQHGRISEVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 309
           S+ RNVITWTALISGYG HGR+SEVLE   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 246 STTRNVITWTALISGYGHHGRVSEVLESFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 305

Query: 310 XXXXSLMTKTYGIEPRGQHYAAMADLLARAGRLQEAYDFVLDAPCKEHSVMWGALVGACK 369
           X   SLM  TY IEPRGQHYAAMADLLARAGRLQEAYDFV+DAPCKEH+V+WGALVG CK
Sbjct: 306 XRYLSLMKTTYEIEPRGQHYAAMADLLARAGRLQEAYDFVVDAPCKEHAVIWGALVGGCK 365

Query: 370 VHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFATSGLWDNVEEIRAMMKKSGMSKDPGC 429
           VHED+DLMKH AA+Y  LD  N+GK VV +N FA SGLWDNV EIR MMKKSGM+K+PG 
Sbjct: 366 VHEDIDLMKHAAANYLALDAGNAGKYVVLANGFAASGLWDNVAEIRGMMKKSGMNKEPGY 425

Query: 430 SRIEIQREFHIFVKGDKSHRETEEIYRTIDRITPILKDAGYIPELCEKTV 480
           SRIEIQREFH FVK DKSH++ EEIYRTI  IT ILKDAG I EL E ++
Sbjct: 426 SRIEIQREFHFFVKSDKSHKQAEEIYRTIHSITAILKDAGSIRELSENSL 473

[Close]

BLAST of CsGy6G032520 vs. NCBI nr
Match: XP_023518629.1 (pentatricopeptide repeat-containing protein At4g16470 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 675.6 bits (1742), Expect = 1.2e-190
Identity = 367/467 (78.59%), Postives = 398/467 (85.22%), Query Frame = 0


Query: 10  RSSFSAVIHLISTSIVPTQLPTVHLPRRHKSEFASPSFQVKPHHKDTSSWDKTLRGLCLT 69
           R S S V+HL + SIV     T+   RRHKSE+ +   QVKPH KD+SSWD+T R LC+T
Sbjct: 6   RPSSSGVVHLFTKSIVAGATATIR--RRHKSEYVNDRSQVKPHQKDSSSWDRTFRSLCIT 65

Query: 70  GKLAEAVALLCCMALQFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKL 129
           G+L+EAVALLCCM  +FHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVG++PNEYL TKL
Sbjct: 66  GRLSEAVALLCCMPFRFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGHLPNEYLKTKL 125

Query: 130 LILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQ 189
           LILYAK GDLETA +LHE LLE SLVSWN+LIAGYVQKG  EVGLE Y KMR++GLMPDQ
Sbjct: 126 LILYAKLGDLETANILHEKLLENSLVSWNALIAGYVQKGFGEVGLEIYFKMRRTGLMPDQ 185

Query: 190 YTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSLSDGHKAFNK 249
           YTFASV RACASLASLEHGKRAHGVLIKC+IGDNVVVSSALVDMYFKCSS+SDG K FNK
Sbjct: 186 YTFASVFRACASLASLEHGKRAHGVLIKCRIGDNVVVSSALVDMYFKCSSISDGRKVFNK 245

Query: 250 SSNRNVITWTALISGYGQHGRISEVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 309
           SS RNVITWTALISGYG HGR+SEVLE    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 246 SSTRNVITWTALISGYGHHGRVSEVLESFNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 305

Query: 310 XXXXSLMTKTYGIEPRGQHYAAMADLLARAGRLQEAYDFVLDAPCKEHSVMWGALVGACK 369
               SLM  TY IEPRGQHYAAMADLLARAGRLQEAYDFV+DAPCKEH+V+WGALVG CK
Sbjct: 306 WRYLSLMKTTYEIEPRGQHYAAMADLLARAGRLQEAYDFVVDAPCKEHAVIWGALVGGCK 365

Query: 370 VHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFATSGLWDNVEEIRAMMKKSGMSKDPGC 429
           VHED+DLMKH AA+Y  LD  N+GK VV +N FA SGLWDNV EIR MMKKSGM+K+PG 
Sbjct: 366 VHEDIDLMKHAAANYLALDAGNAGKYVVLANGFAASGLWDNVAEIRGMMKKSGMNKEPGY 425

Query: 430 SRIEIQREFHIFVKGDKSHRETEEIYRTIDRITPILKDAGYIPELCE 477
           SRIEIQREFH FVK DKSH + EEIYRTI  ITPI+KDAG  PEL E
Sbjct: 426 SRIEIQREFHFFVKSDKSHEQAEEIYRTIHSITPIIKDAGSFPELSE 470

[Close]

BLAST of CsGy6G032520 vs. TAIR10
Match: AT4G16470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 450.3 bits (1157), Expect = 1.5e-126
Identity = 228/438 (52.05%), Postives = 290/438 (66.21%), Query Frame = 0


Query: 36  RRHKSEFASPSFQVKPHHKDTSSWDKTLRGLCLTGKLAEAVALLCCMALQFHSKTYCLLL 95
           RR  +E     FQV+   K T   DKTL+GLC+TG+L EAV LL    LQ   +TY +LL
Sbjct: 57  RRMLAEKRIGRFQVENQRK-TEKLDKTLKGLCVTGRLKEAVGLLWSSGLQVEPETYAVLL 116

Query: 96  QECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSLV 155
           QEC  RKEY KGKRIHAQM VVG+  NEYL  KLLILYA SGDL+TA +L   L  + L+
Sbjct: 117 QECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLI 176

Query: 156 SWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQYTFASVLRACASLASLEHGKRAHGVL 215
            WN++I+GYVQKGL + GL  Y  MRQ+ ++PDQYTFASV RAC++L  LEHGKRAH V+
Sbjct: 177 PWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVM 236

Query: 216 IKCQIGDNVVVSSALVDMYFKCSSLSDGHKAFNKSSNRNVITWTALISGYGQHGRISEVL 275
           IK  I  N++V SALVDMYFKCSS SDGH+ F++ S RNVITWT+LISGYG HG++SEVL
Sbjct: 237 IKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVL 296

Query: 276 EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLMTKTYGIEPRGQHYAAMADL 335
           +                                       M + YGIEP GQHYAAM D 
Sbjct: 297 KCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDT 356

Query: 336 LARAGRLQEAYDFVLDAPCKEHSVMWGALVGACKVHEDVDLMKHVAASYFELDPKNSGKL 395
           L RAGRLQEAY+FV+ +PCKEH  +WG+L+GAC++H +V L++  A  + ELDP N G  
Sbjct: 357 LGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNY 416

Query: 396 VVFSNAFATSGLWDNVEEIRAMMKKSGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEIY 455
           VVF+N +A+ GL +   ++R  M+ +G+ KDPG S+IE+Q E H F+K D SHR +E+IY
Sbjct: 417 VVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIY 476

Query: 456 RTIDRITPILKDAGYIPE 474
           + +  +T    D  Y P+
Sbjct: 477 KKVHEMTSFFMDIDYYPD 493

[Close]

BLAST of CsGy6G032520 vs. TAIR10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 251.1 bits (640), Expect = 1.4e-66
Identity = 126/379 (33.25%), Postives = 203/379 (53.56%), Query Frame = 0


Query: 95  LQECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSL 154
           L  C    +  +G+ IH   V +G   N  +   L+ +Y K  +++TA  +   L  ++L
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403

Query: 155 VSWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQYTFASVLRACASLASLEHGKRAHGV 214
           VSWN++I G+ Q G     L ++ +MR   + PD +T+ SV+ A A L+   H K  HGV
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463

Query: 215 LIKCQIGDNVVVSSALVDMYFKCSSLSDGHKAFNKSSNRNVITWTALISGYGQHGRISEV 274
           +++  +  NV V++ALVDMY KC ++      F+  S R+V TW A+I GYG HG     
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523

Query: 275 LEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLMTKTYGIEPRGQHYAAMAD 334
           LE                                      +M + Y IE    HY AM D
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 583

Query: 335 LLARAGRLQEAYDFVLDAPCKEHSVMWGALVGACKVHEDVDLMKHVAASYFELDPKNSGK 394
           LL RAGRL EA+DF++  P K    ++GA++GAC++H++V+  +  A   FEL+P + G 
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 643

Query: 395 LVVFSNAFATSGLWDNVEEIRAMMKKSGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEI 454
            V+ +N +  + +W+ V ++R  M + G+ K PGCS +EI+ E H F  G  +H ++++I
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKI 703

Query: 455 YRTIDRITPILKDAGYIPE 474
           Y  ++++   +K+AGY+P+
Sbjct: 704 YAFLEKLICHIKEAGYVPD 722

[Close]

BLAST of CsGy6G032520 vs. TAIR10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 248.8 bits (634), Expect = 6.7e-66
Identity = 126/384 (32.81%), Postives = 209/384 (54.43%), Query Frame = 0


Query: 90  TYCLLLQECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKLLILYAKSGDLETAYVLHEHL 149
           TY  +L+ C    +    + +H  ++  G   + ++ + L+ ++AK G+ E A  + + +
Sbjct: 164 TYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 223

Query: 150 LEKSLVSWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQYTFASVLRACASLASLEHGK 209
           +    + WNS+I G+ Q   ++V LE + +M+++G + +Q T  SVLRAC  LA LE G 
Sbjct: 224 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 283

Query: 210 RAHGVLIKCQIGDNVVVSSALVDMYFKCSSLSDGHKAFNKSSNRNVITWTALISGYGQHG 269
           +AH  ++K     ++++++ALVDMY KC SL D  + FN+   R+VITW+ +ISG  Q+G
Sbjct: 284 QAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 343

Query: 270 RISEVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLMTKTYGIEPRGQHY 329
              E L+                                       M K YGI+P  +HY
Sbjct: 344 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 403

Query: 330 AAMADLLARAGRLQEAYDFVLDAPCKEHSVMWGALVGACKVHEDVDLMKHVAASYFELDP 389
             M DLL +AG+L +A   + +  C+  +V W  L+GAC+V  ++ L ++ A     LDP
Sbjct: 404 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 463

Query: 390 KNSGKLVVFSNAFATSGLWDNVEEIRAMMKKSGMSKDPGCSRIEIQREFHIFVKGDKSHR 449
           +++G   + SN +A S  WD+VEEIR  M+  G+ K+PGCS IE+ ++ H F+ GD SH 
Sbjct: 464 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHP 523

Query: 450 ETEEIYRTIDRITPILKDAGYIPE 474
           +  E+ + ++++   L   GY+PE
Sbjct: 524 QIVEVSKKLNQLIHRLTGIGYVPE 542

[Close]

BLAST of CsGy6G032520 vs. TAIR10
Match: AT3G13770.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 248.4 bits (633), Expect = 8.8e-66
Identity = 146/465 (31.40%), Postives = 244/465 (52.47%), Query Frame = 0


Query: 18  HLISTSIVP-TQLPTVHLPRRHKSEFASPSFQV--KPHHKDTSSWDKTLRGLCLTGKLAE 77
           H+I T  +P T L T  L    K +    + +V  +   K+  SW   +     TG  +E
Sbjct: 77  HMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSE 136

Query: 78  AVALLCCMAL---QFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKLLI 137
           A+ +   M     + +  T+  +L  CI       GK+IH  +V   Y  + ++ + LL 
Sbjct: 137 ALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLD 196

Query: 138 LYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQYT 197
           +YAK+G ++ A  + E L E+ +VS  ++IAGY Q GL E  LE + ++   G+ P+  T
Sbjct: 197 MYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVT 256

Query: 198 FASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSLSDGHKAFNKSS 257
           +AS+L A + LA L+HGK+AH  +++ ++    V+ ++L+DMY KC +LS   + F+   
Sbjct: 257 YASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP 316

Query: 258 NRNVITWTALISGYGQHGRISEVLE--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 317
            R  I+W A++ GY +HG   EVLE                                   
Sbjct: 317 ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGL 376

Query: 318 XXXXSLMTKTYGIEPRGQHYAAMADLLARAGRLQEAYDFVLDAPCKEHSVMWGALVGACK 377
                ++   YG +P  +HY  + D+L RAGR+ EA++F+   P K  + + G+L+GAC+
Sbjct: 377 NIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACR 436

Query: 378 VHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFATSGLWDNVEEIRAMMKKSGMSKDPGC 437
           VH  VD+ + V     E++P+N+G  V+ SN +A++G W +V  +RAMM +  ++K+PG 
Sbjct: 437 VHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGR 496

Query: 438 SRIEIQREFHIFVKGDKSHRETEEIYRTIDRITPILKDAGYIPEL 475
           S I+ ++  H F   D++H   EE+   +  I+  +K AGY+P+L
Sbjct: 497 SWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDL 541

[Close]

BLAST of CsGy6G032520 vs. TAIR10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 244.2 bits (622), Expect = 1.7e-64
Identity = 134/430 (31.16%), Postives = 225/430 (52.33%), Query Frame = 0


Query: 47  FQVKPHHKDTSSWDKTLRGLCLTGKLAEAVALLCCMA---LQFHSKTYCLLLQECIFRKE 106
           F+V P  KD  S++  + G   +G   +A+ ++  M    L+  S T   +L       +
Sbjct: 199 FEVMP-RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD 258

Query: 107 YMKGKRIHAQMVVVGYVPNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAG 166
            +KGK IH  ++  G   + Y+ + L+ +YAKS  +E +  +   L  +  +SWNSL+AG
Sbjct: 259 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 318

Query: 167 YVQKGLAEVGLEFYLKMRQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDN 226
           YVQ G     L  + +M  + + P    F+SV+ ACA LA+L  GK+ HG +++   G N
Sbjct: 319 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 378

Query: 227 VVVSSALVDMYFKCSSLSDGHKAFNKSSNRNVITWTALISGYGQHGRISEVLEXXXXXXX 286
           + ++SALVDMY KC ++    K F++ +  + ++WTA+I G+  HG   E +        
Sbjct: 379 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 438

Query: 287 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLMTKTYGIEPRGQHYAAMADLLARAGRLQ 346
                                         + MTK YG+    +HYAA+ADLL RAG+L+
Sbjct: 439 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 498

Query: 347 EAYDFVLDAPCKEHSVMWGALVGACKVHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFA 406
           EAY+F+     +    +W  L+ +C VH++++L + VA   F +D +N G  V+  N +A
Sbjct: 499 EAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYA 558

Query: 407 TSGLWDNVEEIRAMMKKSGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEIYRTIDRITP 466
           ++G W  + ++R  M+K G+ K P CS IE++ + H FV GD+SH   ++I   +  +  
Sbjct: 559 SNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVME 618

Query: 467 ILKDAGYIPE 474
            ++  GY+ +
Sbjct: 619 QMEKEGYVAD 627

[Close]

BLAST of CsGy6G032520 vs. Swiss-Prot
Match: sp|O23491|PP315_ARATH (Pentatricopeptide repeat-containing protein At4g16470 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E12 PE=2 SV=2)

HSP 1 Score: 450.3 bits (1157), Expect = 2.7e-125
Identity = 228/438 (52.05%), Postives = 290/438 (66.21%), Query Frame = 0


Query: 36  RRHKSEFASPSFQVKPHHKDTSSWDKTLRGLCLTGKLAEAVALLCCMALQFHSKTYCLLL 95
           RR  +E     FQV+   K T   DKTL+GLC+TG+L EAV LL    LQ   +TY +LL
Sbjct: 57  RRMLAEKRIGRFQVENQRK-TEKLDKTLKGLCVTGRLKEAVGLLWSSGLQVEPETYAVLL 116

Query: 96  QECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSLV 155
           QEC  RKEY KGKRIHAQM VVG+  NEYL  KLLILYA SGDL+TA +L   L  + L+
Sbjct: 117 QECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLI 176

Query: 156 SWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQYTFASVLRACASLASLEHGKRAHGVL 215
            WN++I+GYVQKGL + GL  Y  MRQ+ ++PDQYTFASV RAC++L  LEHGKRAH V+
Sbjct: 177 PWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVM 236

Query: 216 IKCQIGDNVVVSSALVDMYFKCSSLSDGHKAFNKSSNRNVITWTALISGYGQHGRISEVL 275
           IK  I  N++V SALVDMYFKCSS SDGH+ F++ S RNVITWT+LISGYG HG++SEVL
Sbjct: 237 IKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVL 296

Query: 276 EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLMTKTYGIEPRGQHYAAMADL 335
           +                                       M + YGIEP GQHYAAM D 
Sbjct: 297 KCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDT 356

Query: 336 LARAGRLQEAYDFVLDAPCKEHSVMWGALVGACKVHEDVDLMKHVAASYFELDPKNSGKL 395
           L RAGRLQEAY+FV+ +PCKEH  +WG+L+GAC++H +V L++  A  + ELDP N G  
Sbjct: 357 LGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNY 416

Query: 396 VVFSNAFATSGLWDNVEEIRAMMKKSGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEIY 455
           VVF+N +A+ GL +   ++R  M+ +G+ KDPG S+IE+Q E H F+K D SHR +E+IY
Sbjct: 417 VVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIY 476

Query: 456 RTIDRITPILKDAGYIPE 474
           + +  +T    D  Y P+
Sbjct: 477 KKVHEMTSFFMDIDYYPD 493

[Close]

BLAST of CsGy6G032520 vs. Swiss-Prot
Match: sp|Q3E6Q1|PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.4e-65
Identity = 126/379 (33.25%), Postives = 203/379 (53.56%), Query Frame = 0


Query: 95  LQECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSL 154
           L  C    +  +G+ IH   V +G   N  +   L+ +Y K  +++TA  +   L  ++L
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403

Query: 155 VSWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQYTFASVLRACASLASLEHGKRAHGV 214
           VSWN++I G+ Q G     L ++ +MR   + PD +T+ SV+ A A L+   H K  HGV
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463

Query: 215 LIKCQIGDNVVVSSALVDMYFKCSSLSDGHKAFNKSSNRNVITWTALISGYGQHGRISEV 274
           +++  +  NV V++ALVDMY KC ++      F+  S R+V TW A+I GYG HG     
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523

Query: 275 LEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLMTKTYGIEPRGQHYAAMAD 334
           LE                                      +M + Y IE    HY AM D
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 583

Query: 335 LLARAGRLQEAYDFVLDAPCKEHSVMWGALVGACKVHEDVDLMKHVAASYFELDPKNSGK 394
           LL RAGRL EA+DF++  P K    ++GA++GAC++H++V+  +  A   FEL+P + G 
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 643

Query: 395 LVVFSNAFATSGLWDNVEEIRAMMKKSGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEI 454
            V+ +N +  + +W+ V ++R  M + G+ K PGCS +EI+ E H F  G  +H ++++I
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKI 703

Query: 455 YRTIDRITPILKDAGYIPE 474
           Y  ++++   +K+AGY+P+
Sbjct: 704 YAFLEKLICHIKEAGYVPD 722

[Close]

BLAST of CsGy6G032520 vs. Swiss-Prot
Match: sp|Q9SI53|PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.2e-64
Identity = 126/384 (32.81%), Postives = 209/384 (54.43%), Query Frame = 0


Query: 90  TYCLLLQECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKLLILYAKSGDLETAYVLHEHL 149
           TY  +L+ C    +    + +H  ++  G   + ++ + L+ ++AK G+ E A  + + +
Sbjct: 164 TYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 223

Query: 150 LEKSLVSWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQYTFASVLRACASLASLEHGK 209
           +    + WNS+I G+ Q   ++V LE + +M+++G + +Q T  SVLRAC  LA LE G 
Sbjct: 224 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 283

Query: 210 RAHGVLIKCQIGDNVVVSSALVDMYFKCSSLSDGHKAFNKSSNRNVITWTALISGYGQHG 269
           +AH  ++K     ++++++ALVDMY KC SL D  + FN+   R+VITW+ +ISG  Q+G
Sbjct: 284 QAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 343

Query: 270 RISEVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLMTKTYGIEPRGQHY 329
              E L+                                       M K YGI+P  +HY
Sbjct: 344 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 403

Query: 330 AAMADLLARAGRLQEAYDFVLDAPCKEHSVMWGALVGACKVHEDVDLMKHVAASYFELDP 389
             M DLL +AG+L +A   + +  C+  +V W  L+GAC+V  ++ L ++ A     LDP
Sbjct: 404 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 463

Query: 390 KNSGKLVVFSNAFATSGLWDNVEEIRAMMKKSGMSKDPGCSRIEIQREFHIFVKGDKSHR 449
           +++G   + SN +A S  WD+VEEIR  M+  G+ K+PGCS IE+ ++ H F+ GD SH 
Sbjct: 464 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHP 523

Query: 450 ETEEIYRTIDRITPILKDAGYIPE 474
           +  E+ + ++++   L   GY+PE
Sbjct: 524 QIVEVSKKLNQLIHRLTGIGYVPE 542

[Close]

BLAST of CsGy6G032520 vs. Swiss-Prot
Match: sp|Q9LIC3|PP227_ARATH (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.6e-64
Identity = 146/465 (31.40%), Postives = 244/465 (52.47%), Query Frame = 0


Query: 18  HLISTSIVP-TQLPTVHLPRRHKSEFASPSFQV--KPHHKDTSSWDKTLRGLCLTGKLAE 77
           H+I T  +P T L T  L    K +    + +V  +   K+  SW   +     TG  +E
Sbjct: 77  HMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSE 136

Query: 78  AVALLCCMAL---QFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKLLI 137
           A+ +   M     + +  T+  +L  CI       GK+IH  +V   Y  + ++ + LL 
Sbjct: 137 ALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLD 196

Query: 138 LYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQYT 197
           +YAK+G ++ A  + E L E+ +VS  ++IAGY Q GL E  LE + ++   G+ P+  T
Sbjct: 197 MYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVT 256

Query: 198 FASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSLSDGHKAFNKSS 257
           +AS+L A + LA L+HGK+AH  +++ ++    V+ ++L+DMY KC +LS   + F+   
Sbjct: 257 YASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP 316

Query: 258 NRNVITWTALISGYGQHGRISEVLE--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 317
            R  I+W A++ GY +HG   EVLE                                   
Sbjct: 317 ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGL 376

Query: 318 XXXXSLMTKTYGIEPRGQHYAAMADLLARAGRLQEAYDFVLDAPCKEHSVMWGALVGACK 377
                ++   YG +P  +HY  + D+L RAGR+ EA++F+   P K  + + G+L+GAC+
Sbjct: 377 NIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACR 436

Query: 378 VHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFATSGLWDNVEEIRAMMKKSGMSKDPGC 437
           VH  VD+ + V     E++P+N+G  V+ SN +A++G W +V  +RAMM +  ++K+PG 
Sbjct: 437 VHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGR 496

Query: 438 SRIEIQREFHIFVKGDKSHRETEEIYRTIDRITPILKDAGYIPEL 475
           S I+ ++  H F   D++H   EE+   +  I+  +K AGY+P+L
Sbjct: 497 SWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDL 541

[Close]

BLAST of CsGy6G032520 vs. Swiss-Prot
Match: sp|Q9LW63|PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.0e-63
Identity = 134/430 (31.16%), Postives = 225/430 (52.33%), Query Frame = 0


Query: 47  FQVKPHHKDTSSWDKTLRGLCLTGKLAEAVALLCCMA---LQFHSKTYCLLLQECIFRKE 106
           F+V P  KD  S++  + G   +G   +A+ ++  M    L+  S T   +L       +
Sbjct: 199 FEVMP-RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD 258

Query: 107 YMKGKRIHAQMVVVGYVPNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAG 166
            +KGK IH  ++  G   + Y+ + L+ +YAKS  +E +  +   L  +  +SWNSL+AG
Sbjct: 259 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 318

Query: 167 YVQKGLAEVGLEFYLKMRQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDN 226
           YVQ G     L  + +M  + + P    F+SV+ ACA LA+L  GK+ HG +++   G N
Sbjct: 319 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 378

Query: 227 VVVSSALVDMYFKCSSLSDGHKAFNKSSNRNVITWTALISGYGQHGRISEVLEXXXXXXX 286
           + ++SALVDMY KC ++    K F++ +  + ++WTA+I G+  HG   E +        
Sbjct: 379 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 438

Query: 287 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLMTKTYGIEPRGQHYAAMADLLARAGRLQ 346
                                         + MTK YG+    +HYAA+ADLL RAG+L+
Sbjct: 439 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 498

Query: 347 EAYDFVLDAPCKEHSVMWGALVGACKVHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFA 406
           EAY+F+     +    +W  L+ +C VH++++L + VA   F +D +N G  V+  N +A
Sbjct: 499 EAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYA 558

Query: 407 TSGLWDNVEEIRAMMKKSGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEIYRTIDRITP 466
           ++G W  + ++R  M+K G+ K P CS IE++ + H FV GD+SH   ++I   +  +  
Sbjct: 559 SNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVME 618

Query: 467 ILKDAGYIPE 474
            ++  GY+ +
Sbjct: 619 QMEKEGYVAD 627

[Close]

BLAST of CsGy6G032520 vs. TrEMBL
Match: tr|A0A0A0KJS7|A0A0A0KJS7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511640 PE=4 SV=1)

HSP 1 Score: 894.8 bits (2311), Expect = 8.5e-257
Identity = 486/486 (100.00%), Postives = 486/486 (100.00%), Query Frame = 0


Query: 1   MLKCASPLTRSSFSAVIHLISTSIVPTQLPTVHLPRRHKSEFASPSFQVKPHHKDTSSWD 60
           MLKCASPLTRSSFSAVIHLISTSIVPTQLPTVHLPRRHKSEFASPSFQVKPHHKDTSSWD
Sbjct: 1   MLKCASPLTRSSFSAVIHLISTSIVPTQLPTVHLPRRHKSEFASPSFQVKPHHKDTSSWD 60

Query: 61  KTLRGLCLTGKLAEAVALLCCMALQFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYV 120
           KTLRGLCLTGKLAEAVALLCCMALQFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYV
Sbjct: 61  KTLRGLCLTGKLAEAVALLCCMALQFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYV 120

Query: 121 PNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKM 180
           PNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKM
Sbjct: 121 PNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKM 180

Query: 181 RQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSL 240
           RQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSL
Sbjct: 181 RQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSL 240

Query: 241 SDGHKAFNKSSNRNVITWTALISGYGQHGRISEVLEXXXXXXXXXXXXXXXXXXXXXXXX 300
           SDGHKAFNKSSNRNVITWTALISGYGQHGRISEVLEXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 SDGHKAFNKSSNRNVITWTALISGYGQHGRISEVLEXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXSLMTKTYGIEPRGQHYAAMADLLARAGRLQEAYDFVLDAPCKEHSVM 360
           XXXXXXXXXXXXXSLMTKTYGIEPRGQHYAAMADLLARAGRLQEAYDFVLDAPCKEHSVM
Sbjct: 301 XXXXXXXXXXXXXSLMTKTYGIEPRGQHYAAMADLLARAGRLQEAYDFVLDAPCKEHSVM 360

Query: 361 WGALVGACKVHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFATSGLWDNVEEIRAMMKK 420
           WGALVGACKVHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFATSGLWDNVEEIRAMMKK
Sbjct: 361 WGALVGACKVHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFATSGLWDNVEEIRAMMKK 420

Query: 421 SGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEIYRTIDRITPILKDAGYIPELCEKTVI 480
           SGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEIYRTIDRITPILKDAGYIPELCEKTVI
Sbjct: 421 SGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEIYRTIDRITPILKDAGYIPELCEKTVI 480

Query: 481 EGLSWC 487
           EGLSWC
Sbjct: 481 EGLSWC 486

[Close]

BLAST of CsGy6G032520 vs. TrEMBL
Match: tr|A0A1S3AZV2|A0A1S3AZV2_CUCME (pentatricopeptide repeat-containing protein At4g16470 OS=Cucumis melo OX=3656 GN=LOC103484664 PE=4 SV=1)

HSP 1 Score: 824.7 bits (2129), Expect = 1.1e-235
Identity = 414/477 (86.79%), Postives = 425/477 (89.10%), Query Frame = 0


Query: 1   MLKCASPLTRSSFSAVIHLISTSIVPTQLPTVHLPRRHKSEFASPSFQVKPHHKDTSSWD 60
           MLKCASPLTRSSFSAVIHL + SIV TQ P VH PRRH+SE A PSFQVK HHKD SSWD
Sbjct: 1   MLKCASPLTRSSFSAVIHLFTKSIVATQFPIVHFPRRHESESACPSFQVKRHHKDNSSWD 60

Query: 61  KTLRGLCLTGKLAEAVALLCCMALQFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYV 120
           +TLRGLCLTGKLAEAVALLCCMALQF SKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYV
Sbjct: 61  ETLRGLCLTGKLAEAVALLCCMALQFQSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYV 120

Query: 121 PNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKM 180
           PNEYLNTKLLILYAKSGDLETAY+LHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKM
Sbjct: 121 PNEYLNTKLLILYAKSGDLETAYILHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKM 180

Query: 181 RQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSL 240
           RQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSL
Sbjct: 181 RQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSL 240

Query: 241 SDGHKAFNKSSNRNVITWTALISGYGQHGRISEVLEXXXXXXXXXXXXXXXXXXXXXXXX 300
           SDGHKAFNKS NRNVITWTALISGYGQHGR+SEVLE                        
Sbjct: 241 SDGHKAFNKSINRNVITWTALISGYGQHGRVSEVLESFHSMIKEGYRPNYVTFLVVLAAC 300

Query: 301 XXXXXXXXXXXXXSLMTKTYGIEPRGQHYAAMADLLARAGRLQEAYDFVLDAPCKEHSVM 360
                        SLMTKTY IEPRGQHYAAMADLLARAGRL+EAY+FVLDAPCKE+SVM
Sbjct: 301 SRGGFVSEAWRYFSLMTKTYEIEPRGQHYAAMADLLARAGRLREAYNFVLDAPCKENSVM 360

Query: 361 WGALVGACKVHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFATSGLWDNVEEIRAMMKK 420
           WGALVGACKVHED+DLMKHVAASYFELDP+NSGKLVVFSNAFATSGLWDNVEEIRAMMKK
Sbjct: 361 WGALVGACKVHEDIDLMKHVAASYFELDPENSGKLVVFSNAFATSGLWDNVEEIRAMMKK 420

Query: 421 SGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEIYRTIDRITPILKDAGYIPELCEK 478
           SGMSKDPGCS+IEIQREFHIFVK DKSHRETEEIYRTIDRITPILKDAGY PELCEK
Sbjct: 421 SGMSKDPGCSKIEIQREFHIFVKNDKSHRETEEIYRTIDRITPILKDAGYTPELCEK 477

[Close]

BLAST of CsGy6G032520 vs. TrEMBL
Match: tr|A0A2P4LKA5|A0A2P4LKA5_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_39785 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 3.1e-150
Identity = 269/444 (60.59%), Postives = 335/444 (75.45%), Query Frame = 0


Query: 31  TVHLPRRHKSEFASPSFQVKPHHKDTSSWDKTLRGLCLTGKLAEAVALLCCMALQFHSKT 90
           T  L RR +SE ++ SFQV+P +K     +KTL+GLC++G+L EA+ LLC   ++   +T
Sbjct: 89  TTTLLRRIQSESSNGSFQVEP-YKSYLQLNKTLKGLCISGRLREALGLLCTTGVRVEPRT 148

Query: 91  YCLLLQECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKLLILYAKSGDLETAYVLHEHLL 150
           Y LLLQECIFRKEY KG+RIHA MVVVGY PNEYL TKLLILY KSGDL TA+VL ++L 
Sbjct: 149 YALLLQECIFRKEYKKGRRIHALMVVVGYDPNEYLKTKLLILYVKSGDLGTAHVLFDNLR 208

Query: 151 EKSLVSWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQYTFASVLRACASLASLEHGKR 210
           EKSLVSWN++IAGYVQKGL EVGL  Y KMRQ+G +PDQYTFASV RACA+LA+LEHGK+
Sbjct: 209 EKSLVSWNAMIAGYVQKGLEEVGLNLYYKMRQTGFIPDQYTFASVFRACATLATLEHGKQ 268

Query: 211 AHGVLIKCQIGDNVVVSSALVDMYFKCSSLSDGHKAFNKSSNRNVITWTALISGYGQHGR 270
           AHGV+IKCQI +NVVV+SAL+DMYFKCSSLSDGH+ F+KS NRNV+ WTALISGYGQHG+
Sbjct: 269 AHGVMIKCQIRENVVVNSALMDMYFKCSSLSDGHRVFDKSLNRNVVMWTALISGYGQHGK 328

Query: 271 ISEVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLMTKTYGIEPRGQHYA 330
           + EVLE                                     S M K YGI+PRGQHYA
Sbjct: 329 VVEVLESFHRMKTEGFKPNYVTFLSVLSACSHGGLLDEGWAYFSSMNKDYGIQPRGQHYA 388

Query: 331 AMADLLARAGRLQEAYDFVLDAPCKEHSVMWGALVGACKVHEDVDLMKHVAASYFELDPK 390
           A+ DLL RAGRLQEAY+FVL++PCKEHSV+WGAL+GAC++H D++L+K  A  +FEL+P+
Sbjct: 389 AIVDLLGRAGRLQEAYEFVLNSPCKEHSVIWGALLGACRLHGDMNLVKLAAKKFFELEPE 448

Query: 391 NSGKLVVFSNAFATSGLWDNVEEIRAMMKKSGMSKDPGCSRIEIQREFHIFVKGDKSHRE 450
           N GK VV SNA+ATSG W+N  E+RA+M++SG+ K+PG SRIE+Q     F KGDK   +
Sbjct: 449 NPGKYVVLSNAYATSGFWENAAEVRAVMRESGIIKEPGYSRIEVQNGSQFFFKGDK---Q 508

Query: 451 TEEIYRTIDRITPILKDAGYIPEL 475
           ++E+Y  I  +T IL+DAGY+P+L
Sbjct: 509 SKELYELIREMTCILRDAGYVPDL 528

[Close]

BLAST of CsGy6G032520 vs. TrEMBL
Match: tr|A0A2I4EWW9|A0A2I4EWW9_9ROSI (pentatricopeptide repeat-containing protein At4g16470-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108993425 PE=4 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 5.3e-150
Identity = 268/443 (60.50%), Postives = 331/443 (74.72%), Query Frame = 0


Query: 31  TVHLPRRHKSEFASPSFQVKPHHKDTSSWDKTLRGLCLTGKLAEAVALLCCMALQFHSKT 90
           T  L RR +SE ++ SFQV+ H+K     DKTL+GLC++G+L EAV LL    +Q    T
Sbjct: 97  TARLLRRIQSESSNGSFQVE-HYKGYLQLDKTLKGLCVSGRLREAVGLLWITGVQVEPGT 156

Query: 91  YCLLLQECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKLLILYAKSGDLETAYVLHEHLL 150
           Y LLLQECIFRKEY  G+RIH QMVVVGY P+EYL TKLLILY KSG + TA++L + LL
Sbjct: 157 YSLLLQECIFRKEYSNGRRIHGQMVVVGYDPSEYLKTKLLILYVKSGHIGTAHILFDKLL 216

Query: 151 EKSLVSWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQYTFASVLRACASLASLEHGKR 210
             SLVSWN++IAGYVQ+GL EVGL+ Y KMR++G +PDQYTFASV RACA+LA+LEHGKR
Sbjct: 217 GTSLVSWNAMIAGYVQRGLEEVGLDLYYKMRRTGFVPDQYTFASVFRACATLATLEHGKR 276

Query: 211 AHGVLIKCQIGDNVVVSSALVDMYFKCSSLSDGHKAFNKSSNRNVITWTALISGYGQHGR 270
           AHGV+IKCQ+ +NVV +SAL+DMYFKCSSLSDGH+ F KSSNRNVITWTALISGYGQHG+
Sbjct: 277 AHGVMIKCQVRENVVANSALMDMYFKCSSLSDGHQVFEKSSNRNVITWTALISGYGQHGK 336

Query: 271 ISEVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLMTKTYGIEPRGQHYA 330
           + EVLE                                     S M + YGIEPRG+HYA
Sbjct: 337 VVEVLEFFHRMKNEGFKPNYVTFLAVISACSHGGLVDQGWAYFSSMIRDYGIEPRGKHYA 396

Query: 331 AMADLLARAGRLQEAYDFVLDAPCKEHSVMWGALVGACKVHEDVDLMKHVAASYFELDPK 390
           +M DLL RAGRL EAY+FVL++PCKEHSV+WGAL+GAC++H D++L+K  A  +FEL+P+
Sbjct: 397 SMIDLLGRAGRLHEAYEFVLNSPCKEHSVIWGALLGACRIHGDMNLVKLAAKKFFELEPE 456

Query: 391 NSGKLVVFSNAFATSGLWDNVEEIRAMMKKSGMSKDPGCSRIEIQREFHIFVKGDKSHRE 450
           N GK VV SNA+ATSGLWDNV E+RA+M++SG+ K+PG S IEI+   H F KGDKSH++
Sbjct: 457 NPGKYVVLSNAYATSGLWDNVAEVRAVMRESGVIKEPGHSWIEIRNGSHFFFKGDKSHKQ 516

Query: 451 TEEIYRTIDRITPILKDAGYIPE 474
           + EIY  I  +T ILKD GY+P+
Sbjct: 517 SSEIYEMIRDMTCILKDTGYVPD 538

[Close]

BLAST of CsGy6G032520 vs. TrEMBL
Match: tr|A0A2K1X8Y9|A0A2K1X8Y9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_016G010100v3 PE=4 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 2.2e-148
Identity = 284/419 (67.78%), Postives = 348/419 (83.05%), Query Frame = 0


Query: 58  SWDKTLRGLCLTGKLAEAVALLCCMALQFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVV 117
           +W K L+GLC+TG++ EAV LL    L+    TY LLLQECIF+K Y KGKRIHAQMVVV
Sbjct: 119 NWKKILKGLCITGRMNEAVGLLWRSGLEVDHGTYALLLQECIFKKLYNKGKRIHAQMVVV 178

Query: 118 GYVPNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFY 177
           GYVPNEYL TKL+ILYAKSGDL+T ++L + L+EKSL+SWN+LIAGYVQKGL E+GL FY
Sbjct: 179 GYVPNEYLKTKLMILYAKSGDLKTMHLLFDMLMEKSLISWNALIAGYVQKGLEEMGLSFY 238

Query: 178 LKMRQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKC 237
            +MRQ+GL PDQYTFASV RACA+LA+LEHGKRAH V++KC + +NVVVSSAL+DMYFKC
Sbjct: 239 YEMRQNGLTPDQYTFASVFRACATLATLEHGKRAHCVMMKCFLKENVVVSSALMDMYFKC 298

Query: 238 SSLSDGHKAFNKSSNRNVITWTALISGYGQHGRISEVLEXXXXXXXXXXXXXXXXXXXXX 297
           SSLSDGH  F+KSSNRNV+TWT+LISGYG HGR+SEV+E      XXXXXXXXXXXXXXX
Sbjct: 299 SSLSDGHLVFDKSSNRNVVTWTSLISGYGHHGRVSEVIESFHRMKXXXXXXXXXXXXXXX 358

Query: 298 XXXXXXXXXXXXXXXXSLMTKTYGIEPRGQHYAAMADLLARAGRLQEAYDFVLDAPCKEH 357
           XXXXXXXXXXX     S M + YGI+PRG+HYAAM DLL RAGRL+EAY+FV++APCKEH
Sbjct: 359 XXXXXXXXXXXGWAYFSSMRRDYGIQPRGKHYAAMVDLLGRAGRLKEAYEFVVNAPCKEH 418

Query: 358 SVMWGALVGACKVHEDVDLMKHVAASYFELDPKNSGKLVVFSNAFATSGLWDNVEEIRAM 417
           SV+WGAL+GACK+H D+DL++  A  YFELDP+N+GK VV SNA+A  GLWD+V E+R +
Sbjct: 419 SVLWGALLGACKIHGDMDLIELAARKYFELDPENAGKYVVLSNAYAAFGLWDSVAEVRGV 478

Query: 418 MKKSGMSKDPGCSRIEIQREFHIFVKGDKSHRETEEIYRTIDRITPILKDAGYIPELCE 477
           M+ + ++K+P  S IE+Q + H F++GDKSHRE+EEIY+TI  +  IL DAGY+P+L +
Sbjct: 479 MRDTEINKEPAYSSIEVQGKAHFFLQGDKSHRESEEIYKTIIEMIWILNDAGYVPDLSD 537

The following BLAST results are available for this feature:

BLAST of CsGy6G032520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134800.1	1.3e-256	100.00	PREDICTED: pentatricopeptide repeat-containing protein At4g16470 [Cucumis sativu...	[more]
XP_008440079.1	1.6e-235	86.79	PREDICTED: pentatricopeptide repeat-containing protein At4g16470 [Cucumis melo]	[more]
XP_023003064.1	2.9e-192	78.37	pentatricopeptide repeat-containing protein At4g16470 [Cucurbita maxima]	[more]
XP_022926503.1	3.2e-191	78.94	pentatricopeptide repeat-containing protein At4g16470 [Cucurbita moschata]	[more]
XP_023518629.1	1.2e-190	78.59	pentatricopeptide repeat-containing protein At4g16470 [Cucurbita pepo subsp. pep...	[more]

BLAST of CsGy6G032520 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16470.1	1.5e-126	52.05	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G11290.1	1.4e-66	33.25	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G03880.1	6.7e-66	32.81	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G13770.1	8.8e-66	31.40	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G23330.1	1.7e-64	31.16	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CsGy6G032520 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O23491\|PP315_ARATH	2.7e-125	52.05	Pentatricopeptide repeat-containing protein At4g16470 OS=Arabidopsis thaliana OX...	[more]
sp\|Q3E6Q1\|PPR32_ARATH	2.4e-65	33.25	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
sp\|Q9SI53\|PP147_ARATH	1.2e-64	32.81	Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop...	[more]
sp\|Q9LIC3\|PP227_ARATH	1.6e-64	31.40	Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS...	[more]
sp\|Q9LW63\|PP251_ARATH	3.0e-63	31.16	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th...	[more]

BLAST of CsGy6G032520 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KJS7\|A0A0A0KJS7_CUCSA	8.5e-257	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511640 PE=4 SV=1	[more]
tr\|A0A1S3AZV2\|A0A1S3AZV2_CUCME	1.1e-235	86.79	pentatricopeptide repeat-containing protein At4g16470 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A2P4LKA5\|A0A2P4LKA5_QUESU	3.1e-150	60.59	Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_3...	[more]
tr\|A0A2I4EWW9\|A0A2I4EWW9_9ROSI	5.3e-150	60.50	pentatricopeptide repeat-containing protein At4g16470-like isoform X2 OS=Juglans...	[more]
tr\|A0A2K1X8Y9\|A0A2K1X8Y9_POPTR	2.2e-148	67.78	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_016G010100v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G032520.1	CsGy6G032520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 83..206 e-value: 1.5E-19 score: 72.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 207..463 e-value: 5.9E-31 score: 110.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 253..301 e-value: 7.2E-10 score: 38.8 coord: 153..200 e-value: 2.0E-10 score: 40.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 256..289 e-value: 3.0E-7 score: 28.2 coord: 155..188 e-value: 1.3E-5 score: 23.1 coord: 291..324 e-value: 0.0015 score: 16.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 325..359 score: 5.634
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 289..324 score: 8.133
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 254..288 score: 12.638
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 55..85 score: 6.741
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 87..121 score: 6.818
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 223..253 score: 5.24
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 188..222 score: 5.492
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 153..187 score: 11.312
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 122..152 score: 6.369
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 391..425 score: 6.38
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 50..456
None	No IPR available	PANTHER	PTHR24015:SF721	SUBFAMILY NOT NAMED	coord: 50..456

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G032520	Cla014398	Watermelon (97103) v1	cgybwmB468
CsGy6G032520	Csa6G511640	Cucumber (Chinese Long) v2	cgybcuB281
CsGy6G032520	ClCG01G021380	Watermelon (Charleston Gray)	cgybwcgB399
CsGy6G032520	CSPI06G32950	Wild cucumber (PI 183967)	cgybcpiB287
CsGy6G032520	CmaCh07G003530	Cucurbita maxima (Rimu)	cgybcmaB861
CsGy6G032520	CmoCh07G003430	Cucurbita moschata (Rifu)	cgybcmoB843
CsGy6G032520	Lsi01G004860	Bottle gourd (USVL1VR-Ls)	cgyblsiB398
CsGy6G032520	CsaV3_6G048410	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G032520	Cla97C01G020970	Watermelon (97103) v2	cgybwmbB394
CsGy6G032520	Bhi03G000503	Wax gourd	cgybwgoB598
CsGy6G032520	Carg07881	Silver-seed gourd	carcgybB0640

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G032520	Cucumber (Gy14) v2	cgybcgybB036
CsGy6G032520	Cucurbita maxima (Rimu)	cgybcmaB724
CsGy6G032520	Cucurbita maxima (Rimu)	cgybcmaB771
CsGy6G032520	Cucurbita maxima (Rimu)	cgybcmaB831
CsGy6G032520	Cucurbita moschata (Rifu)	cgybcmoB811
CsGy6G032520	Cucurbita pepo (Zucchini)	cgybcpeB710
CsGy6G032520	Cucurbita pepo (Zucchini)	cgybcpeB810
CsGy6G032520	Cucurbita pepo (Zucchini)	cgybcpeB819
CsGy6G032520	Cucumber (Chinese Long) v2	cgybcuB240
CsGy6G032520	Bottle gourd (USVL1VR-Ls)	cgyblsiB407
CsGy6G032520	Melon (DHL92) v3.5.1	cgybmeB396
CsGy6G032520	Melon (DHL92) v3.5.1	cgybmeB445
CsGy6G032520	Melon (DHL92) v3.6.1	cgybmedB442
CsGy6G032520	Wild cucumber (PI 183967)	cgybcpiB249
CsGy6G032520	Silver-seed gourd	carcgybB0418
CsGy6G032520	Watermelon (97103) v2	cgybwmbB396
CsGy6G032520	Wax gourd	cgybwgoB607