CsaV3_1G015380 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G015380
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Pentatricopeptide repeat-containing protein
Location	chr1 : 10937585 .. 10940441 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTTATATAAGAATTGGTTGTTGAGTAATTTTGTACTCATTTTTTATTTTTGAAAATGTTTTCAGATGAAGGATCAGGTGATAGTTCAGAAAGAAGTGGGGTTTGGCGTTCTAGTGCAAGACATCAAATGCTGTTTATCTTAGGATTTGATAGTTTGACTTAGAAATTGTTTTAATAATTTGCTTCCACTCATTTGTGTAAGTTGTAAAAGTTTATAATGGTTATGTTCCCACATTGCTATTTTAATAGATGTATTGGAAAATATGGGCGGCCGTTAGCGCTTTCTCCTTCTAAACTCAAAACATTAAGCTGTTTCCTCTTTGCTGCAAAGTATGGCACTCCTTGTGCCTTCGTGGAGTCAAATACGGCGGAAAGCCAAGATTGGGACCCCTGCACTGCCCCTTTCACTGGTGTCCTTCAAGATGAAGACCTTCTTCGAACGACCCACATTTCTTCTTCTGGTACTTCCTCTAATTCTACTGGGCTCTATGTTCTGGACCTCATCAACTGTGGTTCTTTAGAACCTGAACGAACACTTTACAGTAAAATGCTAAACAAATGCACATACTTGCGCAAACTTAAGCAGGGCAGAGCCATTCATGCCCACATCCAGAGTTCTACGTTTGAGGATGATCTGGTACTTCTCAATTTTATCTTAAACATGTATGCGAAATGTGGCAGTCTTGAGGAGGCACAGGACCTGTTTGATAAAATGCCTACAAAAGACATGGTTAGTTGGACTGTGCTGATCAGTGGCTATTCTCAGAGCGGGCAAGCATCTGAAGCTCTTGCTTTGTTCCCTAAGATGCTCCACCTGGGCTTCCAACCCAATGAGTTCACTTTGTCTAGCCTGTTGAAGGCTTCTGGTACTGGCCCTAGTGACCACCATGGCAGGCAACTTCATGCATTCTCCCTCAAATATGGCTATGATATGAATGTTCATGTTGGAAGTTCATTGCTCGATATGTATGCTAGGTGGGCGCATATGCGAGAAGCCAAAGTGATTTTTAACAGCCTGGCTGCAAAAAATGTGGTGTCTTGGAATGCTCTAATTGCTGGTCATGCTCGGAAGGGTGAAGGGGAGCATGTGATGAGGTTGTTTTTGCAGATGCTAAGACAGGGTTTTGAACCTACACATTTTACATACTCTAGTGTTTTTACTGCCTGTGCGAGCTCTGGATCTTTGGAGCAAGGCAAATGGGTTCATGCCCATGTAATAAAATCTGGTGGACAGCCCATTGCTTATATTGGAAACACTCTCATTGACATGTATGCTAAATCAGGCAGCATCAAGGATGCAAAGAAAGTCTTCCGGAGGTTGGTTAAACAGGATATTGTTTCGTGGAACTCGATTATATCGGGATATGCACAACATGGACTGGGAGCTGAAGCTTTACAACTATTTGAACAGATGTTGAAGGCCAAGGTTCAACCTAACGAAATTACTTTTCTCTCTGTTCTTACTGCTTGTAGCCATTCGGGGCTTTTGGATGAAGGGCAGTATTATTTTGAATTGATGAAGAAACACAAGATAGAAGCACAGGTTGCACATCATGTAACAGTTGTTGATCTTTTAGGTCGAGCAGGACGGCTTAACGAAGCCAACAAGTTCATAGAGGAAATGCCTATCAAACCTACTGCAGCTGTCTGGGGAGCCTTGCTTGGTTCTTGCAGGATGCATAAGAATATGGATTTGGGTGTTTATGCTGCCGAACAGATTTTCGAGCTTGACCCCCATGACTCAGGTCCTCATGTACTGTTGTCTAATATTTATGCTTCTGCTGGTAGATTGAGTGATGCAGCAAAGGTAAGGAAGATGATGAAAGAGAGTGGGGTAAAGAAAGAACCTGCCTGTAGTTGGGTTGAAATTGAGAATGAAGTCCATGTGTTTGTGGCAAATGATGATTCACATCCAATGAGAGAAGAAATACAGAGGATGTGGGAGAAAATAAGTGGGAAAATTAAAGAGATTGGGTATGTGCCAGACACAAGCCATGTGCTTTTCTTCATGAACCAGCAGGACAGAGAATTAAAGCTACAGTACCATAGTGAGAAGTTAGCATTAGCATTTGCAGTCTTGAAAACTCCTCCTGGATTAACCATTAGGATTAAGAAGAACATTAGAATTTGTGGTGATTGCCACTCTGCATTCAAGTTTGCTTCTAGAGTCTTAGGAAGAGAAATCATCGTAAGAGACACCAACAGATTTCACCATTTCCTTCATGGCATGTGTTCTTGCAGGGACTATTGGTAGCTTATAAGTTCTTCATTACTAACATCAGTCATTTTATACCCTCAATATGTGCTCTCCTAAAAGATTCGAGATGTTAGTTTATAACTTCAAAGGACTGAGTTCAAACTTACCAAGAAGAACCCCAAGTCTCAAAGGTTGGTTAAAGGAACATGGTTCTCTTATCTAACATCAAATCTTGAACTCCATTTTTTATGGTTGTCTAGGTTAGTTGTACAAGAATATATATAATACAAGAAAGTTCAAATAAGCAAAAGTGTCAACAATTGATTGGTGATGTTAAATTAAGGACGATCTTCCAATTGGAACCTCTTGGGTTATATTGATTGTTATTTCTTTGTTAATAATAATCCAATAGGTGCATGCTGTTTGCTAGTCTCTAATTCGTTTGTAGATCTGATGATGCCTTGCCTCTACCCCAATGTGAAGAAGAAATGAGAAGCCATTCAAATTCTGCTCCTTTCTCGTATTTCTAGACTGTCTTTTGCCAGTGATTATCAACTAAATTTTAATTTCTACTAAAGTTTTGGTCAAGAGATTGAAAGAACAAACAAACAAAACAATCTACCATCTTAGATGTTCTTCATTTGTAACGCGAACAACAT

mRNA sequence

ATGGTTATGTTCCCACATTGCTATTTTAATAGATGTATTGGAAAATATGGGCGGCCGTTAGCGCTTTCTCCTTCTAAACTCAAAACATTAAGCTGTTTCCTCTTTGCTGCAAAGTATGGCACTCCTTGTGCCTTCGTGGAGTCAAATACGGCGGAAAGCCAAGATTGGGACCCCTGCACTGCCCCTTTCACTGGTGTCCTTCAAGATGAAGACCTTCTTCGAACGACCCACATTTCTTCTTCTGGTACTTCCTCTAATTCTACTGGGCTCTATGTTCTGGACCTCATCAACTGTGGTTCTTTAGAACCTGAACGAACACTTTACAGTAAAATGCTAAACAAATGCACATACTTGCGCAAACTTAAGCAGGGCAGAGCCATTCATGCCCACATCCAGAGTTCTACGTTTGAGGATGATCTGGTACTTCTCAATTTTATCTTAAACATGTATGCGAAATGTGGCAGTCTTGAGGAGGCACAGGACCTGTTTGATAAAATGCCTACAAAAGACATGGTTAGTTGGACTGTGCTGATCAGTGGCTATTCTCAGAGCGGGCAAGCATCTGAAGCTCTTGCTTTGTTCCCTAAGATGCTCCACCTGGGCTTCCAACCCAATGAGTTCACTTTGTCTAGCCTGTTGAAGGCTTCTGGTACTGGCCCTAGTGACCACCATGGCAGGCAACTTCATGCATTCTCCCTCAAATATGGCTATGATATGAATGTTCATGTTGGAAGTTCATTGCTCGATATGTATGCTAGGTGGGCGCATATGCGAGAAGCCAAAGTGATTTTTAACAGCCTGGCTGCAAAAAATGTGGTGTCTTGGAATGCTCTAATTGCTGGTCATGCTCGGAAGGGTGAAGGGGAGCATGTGATGAGGTTGTTTTTGCAGATGCTAAGACAGGGTTTTGAACCTACACATTTTACATACTCTAGTGTTTTTACTGCCTGTGCGAGCTCTGGATCTTTGGAGCAAGGCAAATGGGTTCATGCCCATGTAATAAAATCTGGTGGACAGCCCATTGCTTATATTGGAAACACTCTCATTGACATGTATGCTAAATCAGGCAGCATCAAGGATGCAAAGAAAGTCTTCCGGAGGTTGGTTAAACAGGATATTGTTTCGTGGAACTCGATTATATCGGGATATGCACAACATGGACTGGGAGCTGAAGCTTTACAACTATTTGAACAGATGTTGAAGGCCAAGGTTCAACCTAACGAAATTACTTTTCTCTCTGTTCTTACTGCTTGTAGCCATTCGGGGCTTTTGGATGAAGGGCAGTATTATTTTGAATTGATGAAGAAACACAAGATAGAAGCACAGGTTGCACATCATGTAACAGTTGTTGATCTTTTAGGTCGAGCAGGACGGCTTAACGAAGCCAACAAGTTCATAGAGGAAATGCCTATCAAACCTACTGCAGCTGTCTGGGGAGCCTTGCTTGGTTCTTGCAGGATGCATAAGAATATGGATTTGGGTGTTTATGCTGCCGAACAGATTTTCGAGCTTGACCCCCATGACTCAGGTCCTCATGTACTGTTGTCTAATATTTATGCTTCTGCTGGTAGATTGAGTGATGCAGCAAAGGTAAGGAAGATGATGAAAGAGAGTGGGGTAAAGAAAGAACCTGCCTGTAGTTGGGTTGAAATTGAGAATGAAGTCCATGTGTTTGTGGCAAATGATGATTCACATCCAATGAGAGAAGAAATACAGAGGATGTGGGAGAAAATAAGTGGGAAAATTAAAGAGATTGGGTATGTGCCAGACACAAGCCATGTGCTTTTCTTCATGAACCAGCAGGACAGAGAATTAAAGCTACAGTACCATAGTGAGAAGTTAGCATTAGCATTTGCAGTCTTGAAAACTCCTCCTGGATTAACCATTAGGATTAAGAAGAACATTAGAATTTGTGGTGATTGCCACTCTGCATTCAAGTTTGCTTCTAGAGTCTTAGGAAGAGAAATCATCGTAAGAGACACCAACAGATTTCACCATTTCCTTCATGGCATGTGTTCTTGCAGGGACTATTGGTAG

Coding sequence (CDS)

ATGGTTATGTTCCCACATTGCTATTTTAATAGATGTATTGGAAAATATGGGCGGCCGTTAGCGCTTTCTCCTTCTAAACTCAAAACATTAAGCTGTTTCCTCTTTGCTGCAAAGTATGGCACTCCTTGTGCCTTCGTGGAGTCAAATACGGCGGAAAGCCAAGATTGGGACCCCTGCACTGCCCCTTTCACTGGTGTCCTTCAAGATGAAGACCTTCTTCGAACGACCCACATTTCTTCTTCTGGTACTTCCTCTAATTCTACTGGGCTCTATGTTCTGGACCTCATCAACTGTGGTTCTTTAGAACCTGAACGAACACTTTACAGTAAAATGCTAAACAAATGCACATACTTGCGCAAACTTAAGCAGGGCAGAGCCATTCATGCCCACATCCAGAGTTCTACGTTTGAGGATGATCTGGTACTTCTCAATTTTATCTTAAACATGTATGCGAAATGTGGCAGTCTTGAGGAGGCACAGGACCTGTTTGATAAAATGCCTACAAAAGACATGGTTAGTTGGACTGTGCTGATCAGTGGCTATTCTCAGAGCGGGCAAGCATCTGAAGCTCTTGCTTTGTTCCCTAAGATGCTCCACCTGGGCTTCCAACCCAATGAGTTCACTTTGTCTAGCCTGTTGAAGGCTTCTGGTACTGGCCCTAGTGACCACCATGGCAGGCAACTTCATGCATTCTCCCTCAAATATGGCTATGATATGAATGTTCATGTTGGAAGTTCATTGCTCGATATGTATGCTAGGTGGGCGCATATGCGAGAAGCCAAAGTGATTTTTAACAGCCTGGCTGCAAAAAATGTGGTGTCTTGGAATGCTCTAATTGCTGGTCATGCTCGGAAGGGTGAAGGGGAGCATGTGATGAGGTTGTTTTTGCAGATGCTAAGACAGGGTTTTGAACCTACACATTTTACATACTCTAGTGTTTTTACTGCCTGTGCGAGCTCTGGATCTTTGGAGCAAGGCAAATGGGTTCATGCCCATGTAATAAAATCTGGTGGACAGCCCATTGCTTATATTGGAAACACTCTCATTGACATGTATGCTAAATCAGGCAGCATCAAGGATGCAAAGAAAGTCTTCCGGAGGTTGGTTAAACAGGATATTGTTTCGTGGAACTCGATTATATCGGGATATGCACAACATGGACTGGGAGCTGAAGCTTTACAACTATTTGAACAGATGTTGAAGGCCAAGGTTCAACCTAACGAAATTACTTTTCTCTCTGTTCTTACTGCTTGTAGCCATTCGGGGCTTTTGGATGAAGGGCAGTATTATTTTGAATTGATGAAGAAACACAAGATAGAAGCACAGGTTGCACATCATGTAACAGTTGTTGATCTTTTAGGTCGAGCAGGACGGCTTAACGAAGCCAACAAGTTCATAGAGGAAATGCCTATCAAACCTACTGCAGCTGTCTGGGGAGCCTTGCTTGGTTCTTGCAGGATGCATAAGAATATGGATTTGGGTGTTTATGCTGCCGAACAGATTTTCGAGCTTGACCCCCATGACTCAGGTCCTCATGTACTGTTGTCTAATATTTATGCTTCTGCTGGTAGATTGAGTGATGCAGCAAAGGTAAGGAAGATGATGAAAGAGAGTGGGGTAAAGAAAGAACCTGCCTGTAGTTGGGTTGAAATTGAGAATGAAGTCCATGTGTTTGTGGCAAATGATGATTCACATCCAATGAGAGAAGAAATACAGAGGATGTGGGAGAAAATAAGTGGGAAAATTAAAGAGATTGGGTATGTGCCAGACACAAGCCATGTGCTTTTCTTCATGAACCAGCAGGACAGAGAATTAAAGCTACAGTACCATAGTGAGAAGTTAGCATTAGCATTTGCAGTCTTGAAAACTCCTCCTGGATTAACCATTAGGATTAAGAAGAACATTAGAATTTGTGGTGATTGCCACTCTGCATTCAAGTTTGCTTCTAGAGTCTTAGGAAGAGAAATCATCGTAAGAGACACCAACAGATTTCACCATTTCCTTCATGGCATGTGTTCTTGCAGGGACTATTGGTAG

Protein sequence

MVMFPHCYFNRCIGKYGRPLALSPSKLKTLSCFLFAAKYGTPCAFVESNTAESQDWDPCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW

Homology

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BLAST of CsaV3_1G015380 vs. NCBI nr
Match: XP_004139511.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like [Cucumis sativus] >XP_011654725.1 PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like [Cucumis sativus] >KGN64985.1 hypothetical protein Csa_1G171070 [Cucumis sativus])

HSP 1 Score: 1043.1 bits (2696), Expect = 4.1e-301
Identity = 678/678 (100.00%), Postives = 678/678 (100.00%), Query Frame = 0


Query: 1   MVMFPHCYFNRCIGKYGRPLALSPSKLKTLSCFLFAAKYGTPCAFVESNTAESQDWDPCT 60
           MVMFPHCYFNRCIGKYGRPLALSPSKLKTLSCFLFAAKYGTPCAFVESNTAESQDWDPCT
Sbjct: 1   MVMFPHCYFNRCIGKYGRPLALSPSKLKTLSCFLFAAKYGTPCAFVESNTAESQDWDPCT 60

Query: 61  APFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRK 120
           APFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRK
Sbjct: 61  APFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRK 120

Query: 121 LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG 180
           LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG
Sbjct: 121 LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG 180

Query: 181 YSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMN 240
           YSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMN
Sbjct: 181 YSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMN 240

Query: 241 VHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLR 300
           VHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLR
Sbjct: 241 VHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLR 300

Query: 301 QGFEPTHFTYSSVFTACASSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           QGFEPTHFTYSSVFTACASSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 QGFEPTHFTYSSVFTACASSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAVWGA 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAVWGA
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAVWGA 480

Query: 481 LLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGV 540
           LLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGV
Sbjct: 481 LLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGV 540

Query: 541 KKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQ 600
           KKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQ
Sbjct: 541 KKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQ 600

Query: 601 QDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRD 660
           QDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRD
Sbjct: 601 QDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRD 660

Query: 661 TNRFHHFLHGMCSCRDYW 679
           TNRFHHFLHGMCSCRDYW
Sbjct: 661 TNRFHHFLHGMCSCRDYW 678

[Close]

BLAST of CsaV3_1G015380 vs. NCBI nr
Match: XP_008464284.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 952.6 bits (2461), Expect = 7.3e-274
Identity = 639/681 (93.83%), Postives = 651/681 (95.59%), Query Frame = 0


Query: 1   MVMFPHCYFNRCIGKYGRPLALSPSKLKTLSCFLFAAKYGT---PCAFVESNTAESQDWD 60
           MVMFPHCYFNRCIGKYG  LALS SKLKTL CFLFAAKYGT   PCAF ESN AESQDW+
Sbjct: 1   MVMFPHCYFNRCIGKYGL-LALSHSKLKTLRCFLFAAKYGTGLAPCAFTESNMAESQDWN 60

Query: 61  PCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTY 120
           P TAPFTGVLQDEDLLRTTHISSS  SS+STGLYVLDLINCGSLEPERTLYSKMLNKCTY
Sbjct: 61  PATAPFTGVLQDEDLLRTTHISSSDVSSSSTGLYVLDLINCGSLEPERTLYSKMLNKCTY 120

Query: 121 LRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVL 180
           LRKLKQGRAIHAHIQSS FE+D VLLNFILNMYAKCGSLEEAQDLFDKMPTKD VSWTVL
Sbjct: 121 LRKLKQGRAIHAHIQSSAFENDPVLLNFILNMYAKCGSLEEAQDLFDKMPTKDRVSWTVL 180

Query: 181 ISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGY 240
           ISGYSQS +ASEALALFPKMLHLGFQPNEFTLSSLLKASG GPSD HGRQLHAFSLKYGY
Sbjct: 181 ISGYSQSRRASEALALFPKMLHLGFQPNEFTLSSLLKASGAGPSDDHGRQLHAFSLKYGY 240

Query: 241 DMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQ 300
           DMNVHVGSSLLDMYARW HMREAKVIF SLAAKNVVSWNALIAGHARKGEGEHVMRLF Q
Sbjct: 241 DMNVHVGSSLLDMYARWGHMREAKVIFKSLAAKNVVSWNALIAGHARKGEGEHVMRLFSQ 300

Query: 301 MLRQGFEPTHFTYSSVFTACASSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           MLRQGFEPTHFTYSSVFTAC      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 MLRQGFEPTHFTYSSVFTACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAV 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP++PTAAV
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMEPTAAV 480

Query: 481 WGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKE 540
           WGALLG+CRMHKNMDLGVYAAE+IFELDPHDSGPHVLLSNIYASAGRL DA  VRKMMKE
Sbjct: 481 WGALLGACRMHKNMDLGVYAAEKIFELDPHDSGPHVLLSNIYASAGRLRDAGNVRKMMKE 540

Query: 541 SGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFF 600
           SGVKKEPACSWVEIENEVH+FVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFF
Sbjct: 541 SGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFF 600

Query: 601 MNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREII 660
           M+QQDRE+KLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFAS+VLGREII
Sbjct: 601 MDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASKVLGREII 660

Query: 661 VRDTNRFHHFLHGMCSCRDYW 679
           VRDTNRFHHFLHGMCSCRDYW
Sbjct: 661 VRDTNRFHHFLHGMCSCRDYW 680

[Close]

BLAST of CsaV3_1G015380 vs. NCBI nr
Match: XP_008464285.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 887.1 bits (2291), Expect = 3.8e-254
Identity = 605/643 (94.09%), Postives = 617/643 (95.96%), Query Frame = 0


Query: 39  YGT---PCAFVESNTAESQDWDPCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDL 98
           YGT   PCAF ESN AESQDW+P TAPFTGVLQDEDLLRTTHISSS  SS+STGLYVLDL
Sbjct: 2   YGTGLAPCAFTESNMAESQDWNPATAPFTGVLQDEDLLRTTHISSSDVSSSSTGLYVLDL 61

Query: 99  INCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGS 158
           INCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSS FE+D VLLNFILNMYAKCGS
Sbjct: 62  INCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSAFENDPVLLNFILNMYAKCGS 121

Query: 159 LEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA 218
           LEEAQDLFDKMPTKD VSWTVLISGYSQS +ASEALALFPKMLHLGFQPNEFTLSSLLKA
Sbjct: 122 LEEAQDLFDKMPTKDRVSWTVLISGYSQSRRASEALALFPKMLHLGFQPNEFTLSSLLKA 181

Query: 219 SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSW 278
           SG GPSD HGRQLHAFSLKYGYDMNVHVGSSLLDMYARW HMREAKVIF SLAAKNVVSW
Sbjct: 182 SGAGPSDDHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWGHMREAKVIFKSLAAKNVVSW 241

Query: 279 NALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLXXXXXXXXXXXX 338
           NALIAGHARKGEGEHVMRLF QMLRQGFEPTHFTYSSVFTAC      XXXXXXXXXXXX
Sbjct: 242 NALIAGHARKGEGEHVMRLFSQMLRQGFEPTHFTYSSVFTACXXXXXXXXXXXXXXXXXX 301

Query: 339 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 398
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 302 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 361

Query: 399 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 458
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 362 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 421

Query: 459 XXXXXXXXXXXXXXPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLL 518
           XXXXXXXXXXXXXXP++PTAAVWGALLG+CRMHKNMDLGVYAAE+IFELDPHDSGPHVLL
Sbjct: 422 XXXXXXXXXXXXXXPMEPTAAVWGALLGACRMHKNMDLGVYAAEKIFELDPHDSGPHVLL 481

Query: 519 SNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMW 578
           SNIYASAGRL DA  VRKMMKESGVKKEPACSWVEIENEVH+FVANDDSHPMREEIQRMW
Sbjct: 482 SNIYASAGRLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMW 541

Query: 579 EKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNI 638
           EKISGKIKEIGYVPDTSHVLFFM+QQDRE+KLQYHSEKLALAFAVLKTPPGLTIRIKKNI
Sbjct: 542 EKISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNI 601

Query: 639 RICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
           RICGDCHSAFKFAS+VLGREIIVRDTNRFHHFLHGMCSCRDYW
Sbjct: 602 RICGDCHSAFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 644

[Close]

BLAST of CsaV3_1G015380 vs. NCBI nr
Match: XP_022142695.1 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial [Momordica charantia] >XP_022142696.1 pentatricopeptide repeat-containing protein At3g24000, mitochondrial [Momordica charantia] >XP_022142697.1 pentatricopeptide repeat-containing protein At3g24000, mitochondrial [Momordica charantia] >XP_022142698.1 pentatricopeptide repeat-containing protein At3g24000, mitochondrial [Momordica charantia] >XP_022142700.1 pentatricopeptide repeat-containing protein At3g24000, mitochondrial [Momordica charantia] >XP_022142701.1 pentatricopeptide repeat-containing protein At3g24000, mitochondrial [Momordica charantia] >XP_022142702.1 pentatricopeptide repeat-containing protein At3g24000, mitochondrial [Momordica charantia])

HSP 1 Score: 842.8 bits (2176), Expect = 8.1e-241
Identity = 509/665 (76.54%), Postives = 540/665 (81.20%), Query Frame = 0


Query: 20  LALSPSKLKTLSCFLFAAKYG----TPCAFVESNTAESQDWDPCTA--PFTGVLQDEDLL 79
           L  S  KLK L CF FAA YG     PCAF ES+TAE ++W+   A  PF GVLQDEDLL
Sbjct: 14  LVFSDPKLKPLKCFFFAANYGAGPAAPCAFSESDTAEGREWNAAVAATPFNGVLQDEDLL 73

Query: 80  RTTHISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQS 139
           R THIS   TS+ STGLYVLDL+N GSLEP+RTLYSKMLNKCT+LRKLKQGR IHAHIQ 
Sbjct: 74  RKTHISPQ-TSTPSTGLYVLDLLNHGSLEPDRTLYSKMLNKCTHLRKLKQGRVIHAHIQG 133

Query: 140 STFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALAL 199
           S+FE DLVL NFILNMYAKCGS+EEA+++FDKMPT+DMVSWTV+ISG+SQSG ASEALAL
Sbjct: 134 SSFESDLVLQNFILNMYAKCGSVEEARNVFDKMPTRDMVSWTVMISGFSQSGLASEALAL 193

Query: 200 FPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYAR 259
           FP+MLH GFQPNEFTLSSLLKASGTGPSD HGRQLHAFSLKYGYD+NVHVGSSLLDMYAR
Sbjct: 194 FPQMLHQGFQPNEFTLSSLLKASGTGPSDDHGRQLHAFSLKYGYDVNVHVGSSLLDMYAR 253

Query: 260 WAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSV 319
             HMREAK IF+ LA KNVVSWNALIAGHARKGEGEHVMRLF QMLRQ  EPTHFTYSSV
Sbjct: 254 CGHMREAKAIFDGLAGKNVVSWNALIAGHARKGEGEHVMRLFWQMLRQDLEPTHFTYSSV 313

Query: 320 FTACASSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 379
           F+ACASSGSL                                                  
Sbjct: 314 FSACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFQRLVKQDV 373

Query: 380 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 439
                                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 374 VSWNSIISGYAQHGLGVEALQLFEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 433

Query: 440 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAVWGALLGSCRMHKNMDL 499
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   P+KPTAAVWGALLG+ RMHKNMDL
Sbjct: 434 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEMPVKPTAAVWGALLGASRMHKNMDL 493

Query: 500 GVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIEN 559
           GVYAAE+IFELDPHDSGPHVLLSNIYASAGRL+DAA VRKMMKESGVKKEPACSWVEIEN
Sbjct: 494 GVYAAERIFELDPHDSGPHVLLSNIYASAGRLNDAANVRKMMKESGVKKEPACSWVEIEN 553

Query: 560 EVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEK 619
           EVH+FVANDDSHPMREEIQRMWEKISGKI+EIGYVPDTSHVLFFM+QQDRE+KLQYHSEK
Sbjct: 554 EVHMFVANDDSHPMREEIQRMWEKISGKIREIGYVPDTSHVLFFMDQQDREVKLQYHSEK 613

Query: 620 LALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCS 679
           LALAF+VLKTPPG TIRIKKNIRICGDCHSAFKFAS+VL REIIVRDTNRFHHFL G+CS
Sbjct: 614 LALAFSVLKTPPGFTIRIKKNIRICGDCHSAFKFASKVLRREIIVRDTNRFHHFLVGLCS 673

[Close]

BLAST of CsaV3_1G015380 vs. NCBI nr
Match: XP_022973115.1 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial [Cucurbita maxima])

HSP 1 Score: 842.4 bits (2175), Expect = 1.1e-240
Identity = 569/658 (86.47%), Postives = 601/658 (91.34%), Query Frame = 0


Query: 26  KLKTLSCFLFAAKYGT---PCAFVESNTAESQDWDPCTA--PFTGVLQDEDLLRTTHISS 85
           KLK   CF  AA YGT   PC+  ES++AE +DW+   A  PFTGVLQDEDLLR THISS
Sbjct: 21  KLKPFKCFFSAANYGTGSPPCSLTESDSAEGRDWNAAAAAVPFTGVLQDEDLLRKTHISS 80

Query: 86  SGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDL 145
           S TS++STGLYVLDLIN G LEPERTLYSKMLNKCT+LRKLK GR IH+HIQ STFE+DL
Sbjct: 81  SETSTSSTGLYVLDLINHGKLEPERTLYSKMLNKCTHLRKLKLGRVIHSHIQGSTFENDL 140

Query: 146 VLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHL 205
           V+ N ILNMYAKCGSLEEA +LFDKMPT+DMVSWTVLISGYSQSG+A EAL LFP+M H 
Sbjct: 141 VIQNSILNMYAKCGSLEEAHNLFDKMPTRDMVSWTVLISGYSQSGRAFEALGLFPQMFHQ 200

Query: 206 GFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREA 265
           GFQPNEFTLSSLLKASG  PSD HGRQLHAFSLKYG++MNVHVGSSLLDMYARW HM+EA
Sbjct: 201 GFQPNEFTLSSLLKASGASPSDEHGRQLHAFSLKYGFNMNVHVGSSLLDMYARWGHMQEA 260

Query: 266 KVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASS 325
           + IFN LAAKNVVSWNALIAGHARKGEGEHVM+LF QMLRQ FEPTHFTYSSVFTACASS
Sbjct: 261 EAIFNGLAAKNVVSWNALIAGHARKGEGEHVMKLFRQMLRQNFEPTHFTYSSVFTACASS 320

Query: 326 GSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 385
           GS           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 321 GSFEQGKWVHAHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 380

Query: 386 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 445
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 381 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 440

Query: 446 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQ 505
           XXXXXXXXXXXXXXXXXXXXXXXXXXX  PI+PTAAVWGALLG+CRMHKNMDLG YAAE+
Sbjct: 441 XXXXXXXXXXXXXXXXXXXXXXXXXXXEMPIEPTAAVWGALLGACRMHKNMDLGAYAAER 500

Query: 506 IFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVA 565
           IFELDPHDSGPHVLLSNIYASAGRL+DAA VRKMMKESGVKKEPACSWVEIEN VH+FVA
Sbjct: 501 IFELDPHDSGPHVLLSNIYASAGRLNDAANVRKMMKESGVKKEPACSWVEIENGVHMFVA 560

Query: 566 NDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAV 625
           ND+SHPMREEIQ+MWEKISGKIKEIGYVPDTSHVLFFM+QQDRE+KLQYHSEKLALAF+V
Sbjct: 561 NDESHPMREEIQKMWEKISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFSV 620

Query: 626 LKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
           LKTPPG TIRIKKNIRICGDCHSAFKFAS+VLGREIIVRDTNRFHHFL G+CSCRDYW
Sbjct: 621 LKTPPGFTIRIKKNIRICGDCHSAFKFASKVLGREIIVRDTNRFHHFLDGLCSCRDYW 678

[Close]

BLAST of CsaV3_1G015380 vs. TAIR10
Match: AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 516.9 bits (1330), Expect = 1.9e-146
Identity = 337/608 (55.43%), Postives = 408/608 (67.11%), Query Frame = 0


Query: 61  APFTGVLQDEDLLRTTHISSSGTSSNS-TGLYVLDLINCGSLEPERTLYSKMLNKCTYLR 120
           AP +   +DE L   ++     TSSN   G Y+           +R  Y+ +L KCT  +
Sbjct: 24  APVSEDSEDESLKFPSNDLLLRTSSNDLEGSYI---------PADRRFYNTLLKKCTVFK 83

Query: 121 KLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLIS 180
            L QGR +HAHI  S F  D+V+ N +LNMYAKCGSLEEA+ +F+KMP +D V+WT LIS
Sbjct: 84  LLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLIS 143

Query: 181 GYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDM 240
           GYSQ  +  +AL  F +ML  G+ PNEFTLSS++KA+        G QLH F +K G+D 
Sbjct: 144 GYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS 203

Query: 241 NVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQML 300
           NVHVGS+LLD+Y R+  M +A+++F++L ++N VSWNALIAGHAR+   E  + LF  ML
Sbjct: 204 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGML 263

Query: 301 RQGFEPTHFTYSSVFTACASSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           R GF P+HF+Y+S+F AC+S+G L                                    
Sbjct: 264 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 323

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                                                           XXXXXXXXXXXX
Sbjct: 324 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNXXXXXXXXXXXX 383

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAVWG 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PI+PTAA+W 
Sbjct: 384 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPIEPTAAIWK 443

Query: 481 ALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESG 540
           ALL +CRMHKN +LG YAAE +FELDP D GPHV+L NIYAS GR +DAA+VRK MKESG
Sbjct: 444 ALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESG 503

Query: 541 VKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMN 600
           VKKEPACSWVEIEN +H+FVAND+ HP REEI R WE++  KIKE+GYVPDTSHV+  ++
Sbjct: 504 VKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVD 563

Query: 601 QQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVR 660
           QQ+RE+ LQYHSEK+ALAFA+L TPPG TI IKKNIR+CGDCH+A K AS+V+GREIIVR
Sbjct: 564 QQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVR 622

Query: 661 DTNRFHHF 668
           DTNRFHHF
Sbjct: 624 DTNRFHHF 622

[Close]

BLAST of CsaV3_1G015380 vs. TAIR10
Match: AT3G13770.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 332.4 bits (851), Expect = 6.5e-91
Identity = 203/630 (32.22%), Postives = 299/630 (47.46%), Query Frame = 0


Query: 71  DLLRTTHISSSGTSSN-------------STGLYVLDLINCGSLEPERTL--YSKMLNKC 130
           +L+R  H S S + +N             S G     L+    L PE     Y  +LN C
Sbjct: 3   NLMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNAC 62

Query: 131 TYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWT 190
              R L+ G+ +HAH+  + +     L   +L  Y KC  LE+A+ + D+MP K++VSWT
Sbjct: 63  LDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWT 122

Query: 191 VLISGYSQSGQASEALALFPKMLHLGFQPNEFT----LSSLLKASGTGPSDHHGRQLHAF 250
            +IS YSQ+G +SEAL +F +M+    +PNEFT    L+S ++ASG G     G+Q+H  
Sbjct: 123 AMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLG----LGKQIHGL 182

Query: 251 SLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHV 310
            +K+ YD ++ VGSSLLDMYA+   ++EA+ IF  L  ++VVS  A+IAG+A+ G  E  
Sbjct: 183 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 242

Query: 311 MRLFLQMLRQGFEPTHFTYSSVFTACASSGSL---XXXXXXXXXXXXXXXXXXXXXXXXX 370
           + +F ++  +G  P + TY+S+ TA +    L                            
Sbjct: 243 LEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDM 302

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 430
                                                                       
Sbjct: 303 YSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVT 362

Query: 431 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 490
                                                                       
Sbjct: 363 LLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKR 422

Query: 491 XPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDA 550
            P KPTA V G+LLG+CR+H ++D+G     ++ E++P ++G +V+LSN+YASAGR +D 
Sbjct: 423 MPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADV 482

Query: 551 AKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYV 610
             VR MM +  V KEP  SW++ E  +H F AND +HP REE+    ++IS K+K+ GYV
Sbjct: 483 NNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYV 542

Query: 611 PDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFA 670
           PD S VL+ ++++ +E  L  HSEKLAL F ++ T  G+ IR+ KN+RIC DCH+  K  
Sbjct: 543 PDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIF 602

Query: 671 SRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
           S+V  RE+ +RD NRFH  + G+CSC DYW
Sbjct: 603 SKVFEREVSLRDKNRFHQIVDGICSCGDYW 628

[Close]

BLAST of CsaV3_1G015380 vs. TAIR10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 319.7 bits (818), Expect = 4.3e-87
Identity = 184/612 (30.07%), Postives = 288/612 (47.06%), Query Frame = 0


Query: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
           L P+R   + +L+ C  L KL  G+ IH+HI ++ F+   ++LN +++MY++CG +E A+
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334

Query: 161 DLFDKMPTKDM--VSWTVLISGYSQSGQASEALALFPKMLHL------------------ 220
            L ++  TKD+    +T L+ GY + G  ++A  +F  +                     
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLXXXXXXXXXXXXXXXXXXXXX 394

Query: 221 -------------GFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSL 280
                        G +PN +TL+++L  + +  S  HG+Q+H  ++K G   +V V ++L
Sbjct: 395 XXXXXXXXXXVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNAL 454

Query: 281 LDMYARWAHMREAKVIFNSL-AAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPT 340
           + MYA+  ++  A   F+ +   ++ VSW ++I   A+ G  E  + LF  ML +G  P 
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514

Query: 341 HFTYSSVFTACASSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 400
           H TY  VF+AC  +G +                                           
Sbjct: 515 HITYVGVFSACTHAGLV------------------------------------------- 574

Query: 401 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 460
                                                                       
Sbjct: 575 ---------------------------------------------------------NQG 634

Query: 461 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAVWGALLGSCR 520
                                                      PI+P    WG+LL +CR
Sbjct: 635 RQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACR 694

Query: 521 MHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPAC 580
           +HKN+DLG  AAE++  L+P +SG +  L+N+Y++ G+  +AAK+RK MK+  VKKE   
Sbjct: 695 VHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGF 754

Query: 581 SWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELK 640
           SW+E++++VHVF   D +HP + EI    +KI  +IK++GYVPDT+ VL  + ++ +E  
Sbjct: 755 SWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQI 786

Query: 641 LQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHH 679
           L++HSEKLA+AF ++ TP   T+RI KN+R+C DCH+A KF S+++GREIIVRDT RFHH
Sbjct: 815 LRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHH 786

[Close]

BLAST of CsaV3_1G015380 vs. TAIR10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 307.8 bits (787), Expect = 1.7e-83
Identity = 230/598 (38.46%), Postives = 326/598 (54.52%), Query Frame = 0


Query: 82  GTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLV 141
           G S ++  LY  ++   G +EP+   Y  ++   T +  ++ G  IH+ +  S F   + 
Sbjct: 99  GNSISAFSLY-REMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIY 158

Query: 142 LLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLG 201
           + N +L++YA CG +  A  +FDKMP KD+V+W  +I+G++++G+  EALAL+ +M   G
Sbjct: 159 VQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 218

Query: 202 FQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAK 261
            +P+ FT+ SLL A     +   G+++H + +K G   N+H  + LLD+YAR   + EAK
Sbjct: 219 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 278

Query: 262 VIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQM-LRQGFEPTHFTYSSVFTACASS 321
            +F+ +  KN VSW +LI G A  G G+  + LF  M   +G  P   T+  +  AC+  
Sbjct: 279 TLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS-- 338

Query: 322 GSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 381
                                                                       
Sbjct: 339 ------------------------------------------------------------ 398

Query: 382 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 441
                                                 XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 399 --------------------------------------XXXXXXXXXXXXXXXXXXXXXX 458

Query: 442 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQ 501
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXP++P   +W  LLG+C +H + DL  +A  Q
Sbjct: 459 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMQPNVVIWRTLLGACTVHGDSDLAEFARIQ 518

Query: 502 IFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVA 561
           I +L+P+ SG +VLLSN+YAS  R SD  K+RK M   GVKK P  S VE+ N VH F+ 
Sbjct: 519 ILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLM 578

Query: 562 NDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAV 621
            D SHP  + I    ++++G+++  GYVP  S+V   + ++++E  + YHSEK+A+AF +
Sbjct: 579 GDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFML 595

Query: 622 LKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
           + TP    I + KN+R+C DCH A K  S+V  REI+VRD +RFHHF +G CSC+DYW
Sbjct: 639 ISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

[Close]

BLAST of CsaV3_1G015380 vs. TAIR10
Match: AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 306.6 bits (784), Expect = 3.8e-83
Identity = 172/564 (30.50%), Postives = 268/564 (47.52%), Query Frame = 0


Query: 115 CTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSW 174
           C +L  + QG+ +HA+   S ++ DL + + IL+MY KCG +  AQ  FD +P  D V+W
Sbjct: 527 CGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAW 586

Query: 175 TVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLK 234
           T +ISG  ++G+   A  +F +M  +G  P+EFT+++L KAS    +   GRQ+HA +LK
Sbjct: 587 TTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK 646

Query: 235 YGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRL 294
                +  VG+SL+DMYA+   + +A  +F  +   N+ +WNA++ G A+ GEG+  ++L
Sbjct: 647 LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQL 706

Query: 295 FLQMLRQGFEPTHFTYSSVFTACASSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 354
           F QM   G +P   T+  V +AC+ SG +                               
Sbjct: 707 FKQMKSLGIKPDKVTFIGVLSACSHSGLV------------------------------- 766

Query: 355 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 414
                                                                       
Sbjct: 767 ------------------------------------------------------------ 826

Query: 415 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPT 474
                                                                   ++ +
Sbjct: 827 ---------SEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEAS 886

Query: 475 AAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKM 534
           A+++  LL +CR+  + + G   A ++ EL+P DS  +VLLSN+YA+A +  +    R M
Sbjct: 887 ASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTM 946

Query: 535 MKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHV 594
           MK   VKK+P  SW+E++N++H+FV +D S+   E I R  + +   IK+ GYVP+T   
Sbjct: 947 MKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFT 990

Query: 595 LFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGR 654
           L  + ++++E  L YHSEKLA+AF +L TPP   IR+ KN+R+CGDCH+A K+ ++V  R
Sbjct: 1007 LVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNR 990

Query: 655 EIIVRDTNRFHHFLHGMCSCRDYW 679
           EI++RD NRFH F  G+CSC DYW
Sbjct: 1067 EIVLRDANRFHRFKDGICSCGDYW 990

[Close]

BLAST of CsaV3_1G015380 vs. Swiss-Prot
Match: sp|Q9LIQ7|PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 3.1e-151
Identity = 344/619 (55.57%), Postives = 416/619 (67.21%), Query Frame = 0


Query: 61  APFTGVLQDEDLLRTTHISSSGTSSNS-TGLYVLDLINCGSLEPERTLYSKMLNKCTYLR 120
           AP +   +DE L   ++     TSSN   G Y+           +R  Y+ +L KCT  +
Sbjct: 24  APVSEDSEDESLKFPSNDLLLRTSSNDLEGSYI---------PADRRFYNTLLKKCTVFK 83

Query: 121 KLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLIS 180
            L QGR +HAHI  S F  D+V+ N +LNMYAKCGSLEEA+ +F+KMP +D V+WT LIS
Sbjct: 84  LLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLIS 143

Query: 181 GYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDM 240
           GYSQ  +  +AL  F +ML  G+ PNEFTLSS++KA+        G QLH F +K G+D 
Sbjct: 144 GYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS 203

Query: 241 NVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQML 300
           NVHVGS+LLD+Y R+  M +A+++F++L ++N VSWNALIAGHAR+   E  + LF  ML
Sbjct: 204 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGML 263

Query: 301 RQGFEPTHFTYSSVFTACASSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           R GF P+HF+Y+S+F AC+S+G L                                    
Sbjct: 264 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 323

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                                                           XXXXXXXXXXXX
Sbjct: 324 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNXXXXXXXXXXXX 383

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAVWG 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PI+PTAA+W 
Sbjct: 384 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPIEPTAAIWK 443

Query: 481 ALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESG 540
           ALL +CRMHKN +LG YAAE +FELDP D GPHV+L NIYAS GR +DAA+VRK MKESG
Sbjct: 444 ALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESG 503

Query: 541 VKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMN 600
           VKKEPACSWVEIEN +H+FVAND+ HP REEI R WE++  KIKE+GYVPDTSHV+  ++
Sbjct: 504 VKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVD 563

Query: 601 QQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVR 660
           QQ+RE+ LQYHSEK+ALAFA+L TPPG TI IKKNIR+CGDCH+A K AS+V+GREIIVR
Sbjct: 564 QQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVR 623

Query: 661 DTNRFHHFLHGMCSCRDYW 679
           DTNRFHHF  G CSC+DYW
Sbjct: 624 DTNRFHHFKDGNCSCKDYW 633

[Close]

BLAST of CsaV3_1G015380 vs. Swiss-Prot
Match: sp|Q9LIC3|PP227_ARATH (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.2e-89
Identity = 203/630 (32.22%), Postives = 299/630 (47.46%), Query Frame = 0


Query: 71  DLLRTTHISSSGTSSN-------------STGLYVLDLINCGSLEPERTL--YSKMLNKC 130
           +L+R  H S S + +N             S G     L+    L PE     Y  +LN C
Sbjct: 3   NLMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNAC 62

Query: 131 TYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWT 190
              R L+ G+ +HAH+  + +     L   +L  Y KC  LE+A+ + D+MP K++VSWT
Sbjct: 63  LDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWT 122

Query: 191 VLISGYSQSGQASEALALFPKMLHLGFQPNEFT----LSSLLKASGTGPSDHHGRQLHAF 250
            +IS YSQ+G +SEAL +F +M+    +PNEFT    L+S ++ASG G     G+Q+H  
Sbjct: 123 AMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLG----LGKQIHGL 182

Query: 251 SLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHV 310
            +K+ YD ++ VGSSLLDMYA+   ++EA+ IF  L  ++VVS  A+IAG+A+ G  E  
Sbjct: 183 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 242

Query: 311 MRLFLQMLRQGFEPTHFTYSSVFTACASSGSL---XXXXXXXXXXXXXXXXXXXXXXXXX 370
           + +F ++  +G  P + TY+S+ TA +    L                            
Sbjct: 243 LEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDM 302

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 430
                                                                       
Sbjct: 303 YSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVT 362

Query: 431 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 490
                                                                       
Sbjct: 363 LLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKR 422

Query: 491 XPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDA 550
            P KPTA V G+LLG+CR+H ++D+G     ++ E++P ++G +V+LSN+YASAGR +D 
Sbjct: 423 MPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADV 482

Query: 551 AKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYV 610
             VR MM +  V KEP  SW++ E  +H F AND +HP REE+    ++IS K+K+ GYV
Sbjct: 483 NNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYV 542

Query: 611 PDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFA 670
           PD S VL+ ++++ +E  L  HSEKLAL F ++ T  G+ IR+ KN+RIC DCH+  K  
Sbjct: 543 PDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIF 602

Query: 671 SRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
           S+V  RE+ +RD NRFH  + G+CSC DYW
Sbjct: 603 SKVFEREVSLRDKNRFHQIVDGICSCGDYW 628

[Close]

BLAST of CsaV3_1G015380 vs. Swiss-Prot
Match: sp|Q9SHZ8|PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.8e-86
Identity = 184/612 (30.07%), Postives = 288/612 (47.06%), Query Frame = 0


Query: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
           L P+R   + +L+ C  L KL  G+ IH+HI ++ F+   ++LN +++MY++CG +E A+
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334

Query: 161 DLFDKMPTKDM--VSWTVLISGYSQSGQASEALALFPKMLHL------------------ 220
            L ++  TKD+    +T L+ GY + G  ++A  +F  +                     
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLXXXXXXXXXXXXXXXXXXXXX 394

Query: 221 -------------GFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSL 280
                        G +PN +TL+++L  + +  S  HG+Q+H  ++K G   +V V ++L
Sbjct: 395 XXXXXXXXXXVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNAL 454

Query: 281 LDMYARWAHMREAKVIFNSL-AAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPT 340
           + MYA+  ++  A   F+ +   ++ VSW ++I   A+ G  E  + LF  ML +G  P 
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514

Query: 341 HFTYSSVFTACASSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 400
           H TY  VF+AC  +G +                                           
Sbjct: 515 HITYVGVFSACTHAGLV------------------------------------------- 574

Query: 401 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 460
                                                                       
Sbjct: 575 ---------------------------------------------------------NQG 634

Query: 461 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAVWGALLGSCR 520
                                                      PI+P    WG+LL +CR
Sbjct: 635 RQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACR 694

Query: 521 MHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPAC 580
           +HKN+DLG  AAE++  L+P +SG +  L+N+Y++ G+  +AAK+RK MK+  VKKE   
Sbjct: 695 VHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGF 754

Query: 581 SWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELK 640
           SW+E++++VHVF   D +HP + EI    +KI  +IK++GYVPDT+ VL  + ++ +E  
Sbjct: 755 SWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQI 786

Query: 641 LQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHH 679
           L++HSEKLA+AF ++ TP   T+RI KN+R+C DCH+A KF S+++GREIIVRDT RFHH
Sbjct: 815 LRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHH 786

[Close]

BLAST of CsaV3_1G015380 vs. Swiss-Prot
Match: sp|A8MQA3|PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 307.8 bits (787), Expect = 3.1e-82
Identity = 230/598 (38.46%), Postives = 326/598 (54.52%), Query Frame = 0


Query: 82  GTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLV 141
           G S ++  LY  ++   G +EP+   Y  ++   T +  ++ G  IH+ +  S F   + 
Sbjct: 99  GNSISAFSLY-REMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIY 158

Query: 142 LLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLG 201
           + N +L++YA CG +  A  +FDKMP KD+V+W  +I+G++++G+  EALAL+ +M   G
Sbjct: 159 VQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 218

Query: 202 FQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAK 261
            +P+ FT+ SLL A     +   G+++H + +K G   N+H  + LLD+YAR   + EAK
Sbjct: 219 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 278

Query: 262 VIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQM-LRQGFEPTHFTYSSVFTACASS 321
            +F+ +  KN VSW +LI G A  G G+  + LF  M   +G  P   T+  +  AC+  
Sbjct: 279 TLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS-- 338

Query: 322 GSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 381
                                                                       
Sbjct: 339 ------------------------------------------------------------ 398

Query: 382 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 441
                                                 XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 399 --------------------------------------XXXXXXXXXXXXXXXXXXXXXX 458

Query: 442 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQ 501
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXP++P   +W  LLG+C +H + DL  +A  Q
Sbjct: 459 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMQPNVVIWRTLLGACTVHGDSDLAEFARIQ 518

Query: 502 IFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVA 561
           I +L+P+ SG +VLLSN+YAS  R SD  K+RK M   GVKK P  S VE+ N VH F+ 
Sbjct: 519 ILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLM 578

Query: 562 NDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAV 621
            D SHP  + I    ++++G+++  GYVP  S+V   + ++++E  + YHSEK+A+AF +
Sbjct: 579 GDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFML 595

Query: 622 LKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
           + TP    I + KN+R+C DCH A K  S+V  REI+VRD +RFHHF +G CSC+DYW
Sbjct: 639 ISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

[Close]

BLAST of CsaV3_1G015380 vs. Swiss-Prot
Match: sp|Q9SMZ2|PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.9e-82
Identity = 172/564 (30.50%), Postives = 268/564 (47.52%), Query Frame = 0


Query: 115 CTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSW 174
           C +L  + QG+ +HA+   S ++ DL + + IL+MY KCG +  AQ  FD +P  D V+W
Sbjct: 527 CGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAW 586

Query: 175 TVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLK 234
           T +ISG  ++G+   A  +F +M  +G  P+EFT+++L KAS    +   GRQ+HA +LK
Sbjct: 587 TTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK 646

Query: 235 YGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRL 294
                +  VG+SL+DMYA+   + +A  +F  +   N+ +WNA++ G A+ GEG+  ++L
Sbjct: 647 LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQL 706

Query: 295 FLQMLRQGFEPTHFTYSSVFTACASSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 354
           F QM   G +P   T+  V +AC+ SG +                               
Sbjct: 707 FKQMKSLGIKPDKVTFIGVLSACSHSGLV------------------------------- 766

Query: 355 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 414
                                                                       
Sbjct: 767 ------------------------------------------------------------ 826

Query: 415 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPT 474
                                                                   ++ +
Sbjct: 827 ---------SEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEAS 886

Query: 475 AAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKM 534
           A+++  LL +CR+  + + G   A ++ EL+P DS  +VLLSN+YA+A +  +    R M
Sbjct: 887 ASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTM 946

Query: 535 MKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHV 594
           MK   VKK+P  SW+E++N++H+FV +D S+   E I R  + +   IK+ GYVP+T   
Sbjct: 947 MKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFT 990

Query: 595 LFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGR 654
           L  + ++++E  L YHSEKLA+AF +L TPP   IR+ KN+R+CGDCH+A K+ ++V  R
Sbjct: 1007 LVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNR 990

Query: 655 EIIVRDTNRFHHFLHGMCSCRDYW 679
           EI++RD NRFH F  G+CSC DYW
Sbjct: 1067 EIVLRDANRFHRFKDGICSCGDYW 990

[Close]

BLAST of CsaV3_1G015380 vs. TrEMBL
Match: tr|A0A0A0LSV8|A0A0A0LSV8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G171070 PE=4 SV=1)

HSP 1 Score: 1043.1 bits (2696), Expect = 2.7e-301
Identity = 678/678 (100.00%), Postives = 678/678 (100.00%), Query Frame = 0


Query: 1   MVMFPHCYFNRCIGKYGRPLALSPSKLKTLSCFLFAAKYGTPCAFVESNTAESQDWDPCT 60
           MVMFPHCYFNRCIGKYGRPLALSPSKLKTLSCFLFAAKYGTPCAFVESNTAESQDWDPCT
Sbjct: 1   MVMFPHCYFNRCIGKYGRPLALSPSKLKTLSCFLFAAKYGTPCAFVESNTAESQDWDPCT 60

Query: 61  APFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRK 120
           APFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRK
Sbjct: 61  APFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRK 120

Query: 121 LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG 180
           LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG
Sbjct: 121 LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG 180

Query: 181 YSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMN 240
           YSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMN
Sbjct: 181 YSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMN 240

Query: 241 VHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLR 300
           VHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLR
Sbjct: 241 VHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLR 300

Query: 301 QGFEPTHFTYSSVFTACASSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           QGFEPTHFTYSSVFTACASSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 QGFEPTHFTYSSVFTACASSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAVWGA 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAVWGA
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAVWGA 480

Query: 481 LLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGV 540
           LLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGV
Sbjct: 481 LLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGV 540

Query: 541 KKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQ 600
           KKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQ
Sbjct: 541 KKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQ 600

Query: 601 QDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRD 660
           QDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRD
Sbjct: 601 QDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRD 660

Query: 661 TNRFHHFLHGMCSCRDYW 679
           TNRFHHFLHGMCSCRDYW
Sbjct: 661 TNRFHHFLHGMCSCRDYW 678

[Close]

BLAST of CsaV3_1G015380 vs. TrEMBL
Match: tr|A0A1S3CMN0|A0A1S3CMN0_CUCME (pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502212 PE=4 SV=1)

HSP 1 Score: 952.6 bits (2461), Expect = 4.8e-274
Identity = 639/681 (93.83%), Postives = 651/681 (95.59%), Query Frame = 0


Query: 1   MVMFPHCYFNRCIGKYGRPLALSPSKLKTLSCFLFAAKYGT---PCAFVESNTAESQDWD 60
           MVMFPHCYFNRCIGKYG  LALS SKLKTL CFLFAAKYGT   PCAF ESN AESQDW+
Sbjct: 1   MVMFPHCYFNRCIGKYGL-LALSHSKLKTLRCFLFAAKYGTGLAPCAFTESNMAESQDWN 60

Query: 61  PCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTY 120
           P TAPFTGVLQDEDLLRTTHISSS  SS+STGLYVLDLINCGSLEPERTLYSKMLNKCTY
Sbjct: 61  PATAPFTGVLQDEDLLRTTHISSSDVSSSSTGLYVLDLINCGSLEPERTLYSKMLNKCTY 120

Query: 121 LRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVL 180
           LRKLKQGRAIHAHIQSS FE+D VLLNFILNMYAKCGSLEEAQDLFDKMPTKD VSWTVL
Sbjct: 121 LRKLKQGRAIHAHIQSSAFENDPVLLNFILNMYAKCGSLEEAQDLFDKMPTKDRVSWTVL 180

Query: 181 ISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGY 240
           ISGYSQS +ASEALALFPKMLHLGFQPNEFTLSSLLKASG GPSD HGRQLHAFSLKYGY
Sbjct: 181 ISGYSQSRRASEALALFPKMLHLGFQPNEFTLSSLLKASGAGPSDDHGRQLHAFSLKYGY 240

Query: 241 DMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQ 300
           DMNVHVGSSLLDMYARW HMREAKVIF SLAAKNVVSWNALIAGHARKGEGEHVMRLF Q
Sbjct: 241 DMNVHVGSSLLDMYARWGHMREAKVIFKSLAAKNVVSWNALIAGHARKGEGEHVMRLFSQ 300

Query: 301 MLRQGFEPTHFTYSSVFTACASSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           MLRQGFEPTHFTYSSVFTAC      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 MLRQGFEPTHFTYSSVFTACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAV 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP++PTAAV
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMEPTAAV 480

Query: 481 WGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKE 540
           WGALLG+CRMHKNMDLGVYAAE+IFELDPHDSGPHVLLSNIYASAGRL DA  VRKMMKE
Sbjct: 481 WGALLGACRMHKNMDLGVYAAEKIFELDPHDSGPHVLLSNIYASAGRLRDAGNVRKMMKE 540

Query: 541 SGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFF 600
           SGVKKEPACSWVEIENEVH+FVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFF
Sbjct: 541 SGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFF 600

Query: 601 MNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREII 660
           M+QQDRE+KLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFAS+VLGREII
Sbjct: 601 MDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASKVLGREII 660

Query: 661 VRDTNRFHHFLHGMCSCRDYW 679
           VRDTNRFHHFLHGMCSCRDYW
Sbjct: 661 VRDTNRFHHFLHGMCSCRDYW 680

[Close]

BLAST of CsaV3_1G015380 vs. TrEMBL
Match: tr|A0A1S3CL86|A0A1S3CL86_CUCME (pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502212 PE=4 SV=1)

HSP 1 Score: 887.1 bits (2291), Expect = 2.5e-254
Identity = 605/643 (94.09%), Postives = 617/643 (95.96%), Query Frame = 0


Query: 39  YGT---PCAFVESNTAESQDWDPCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDL 98
           YGT   PCAF ESN AESQDW+P TAPFTGVLQDEDLLRTTHISSS  SS+STGLYVLDL
Sbjct: 2   YGTGLAPCAFTESNMAESQDWNPATAPFTGVLQDEDLLRTTHISSSDVSSSSTGLYVLDL 61

Query: 99  INCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGS 158
           INCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSS FE+D VLLNFILNMYAKCGS
Sbjct: 62  INCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSAFENDPVLLNFILNMYAKCGS 121

Query: 159 LEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA 218
           LEEAQDLFDKMPTKD VSWTVLISGYSQS +ASEALALFPKMLHLGFQPNEFTLSSLLKA
Sbjct: 122 LEEAQDLFDKMPTKDRVSWTVLISGYSQSRRASEALALFPKMLHLGFQPNEFTLSSLLKA 181

Query: 219 SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSW 278
           SG GPSD HGRQLHAFSLKYGYDMNVHVGSSLLDMYARW HMREAKVIF SLAAKNVVSW
Sbjct: 182 SGAGPSDDHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWGHMREAKVIFKSLAAKNVVSW 241

Query: 279 NALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLXXXXXXXXXXXX 338
           NALIAGHARKGEGEHVMRLF QMLRQGFEPTHFTYSSVFTAC      XXXXXXXXXXXX
Sbjct: 242 NALIAGHARKGEGEHVMRLFSQMLRQGFEPTHFTYSSVFTACXXXXXXXXXXXXXXXXXX 301

Query: 339 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 398
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 302 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 361

Query: 399 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 458
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 362 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 421

Query: 459 XXXXXXXXXXXXXXPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLL 518
           XXXXXXXXXXXXXXP++PTAAVWGALLG+CRMHKNMDLGVYAAE+IFELDPHDSGPHVLL
Sbjct: 422 XXXXXXXXXXXXXXPMEPTAAVWGALLGACRMHKNMDLGVYAAEKIFELDPHDSGPHVLL 481

Query: 519 SNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMW 578
           SNIYASAGRL DA  VRKMMKESGVKKEPACSWVEIENEVH+FVANDDSHPMREEIQRMW
Sbjct: 482 SNIYASAGRLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMW 541

Query: 579 EKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNI 638
           EKISGKIKEIGYVPDTSHVLFFM+QQDRE+KLQYHSEKLALAFAVLKTPPGLTIRIKKNI
Sbjct: 542 EKISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNI 601

Query: 639 RICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
           RICGDCHSAFKFAS+VLGREIIVRDTNRFHHFLHGMCSCRDYW
Sbjct: 602 RICGDCHSAFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 644

[Close]

BLAST of CsaV3_1G015380 vs. TrEMBL
Match: tr|A0A251PDH0|A0A251PDH0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G001500 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 3.4e-187
Identity = 348/665 (52.33%), Postives = 425/665 (63.91%), Query Frame = 0


Query: 16  YGRPLALSPSKLKTLSCFLFAAKYGTPCAFVESNTAESQDWDPCTAPFTGVLQDEDLLRT 75
           Y +  A+   KL   +  L  +     C   E   +E +DW       + ++QD+DLLR 
Sbjct: 16  YKKAAAVGIQKLSLSAAQLRTSATRASCTDSE-EISEGEDWYA-----SHIIQDKDLLRK 75

Query: 76  THISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSST 135
           + + +SG     TGL+VLDL+N GSLE +RTLY+K+LN+CT + +L+Q R +HAHI +S 
Sbjct: 76  S-LHNSG-----TGLHVLDLVNRGSLEADRTLYNKLLNRCTQMGRLQQARIVHAHILTSH 135

Query: 136 FEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFP 195
           F+DDL + N ILNMY KCGSLE+A++LFD+MP+KD+V+WT LISGYSQ  +  +AL LFP
Sbjct: 136 FKDDLPIHNTILNMYVKCGSLEDARNLFDQMPSKDLVTWTALISGYSQYDRPQDALVLFP 195

Query: 196 KMLHLGFQPNEFTLSSLLKASGTGPSDH--HGRQLHAFSLKYGYDMNVHVGSSLLDMYAR 255
           +ML  G +PN+FTLSSL KA+G    D+  HGRQLHA+ LKYG+D NV+VG+SL+DMYAR
Sbjct: 196 QMLLRGLEPNQFTLSSLFKAAGAVSDDNNKHGRQLHAYCLKYGFDTNVYVGTSLVDMYAR 255

Query: 256 WAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSV 315
           W HM E+++IF+SL  KN VSWNALIAGHARK +GEH +RLF +MLR+GF+PTHFTYSSV
Sbjct: 256 WGHMDESQLIFDSLETKNEVSWNALIAGHARKAQGEHALRLFWKMLREGFKPTHFTYSSV 315

Query: 316 FTACASSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 375
           FTACAS+GS+                                                  
Sbjct: 316 FTACASAGSMEQGKWVHAHMIKSGAKLVAFVGNTLLDMYAKSGSIEDARKVFDRLVRQDI 375

Query: 376 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 435
                                                                       
Sbjct: 376 VSWNSMLTGYAQHGLGQETVQRFEEMLRIGIQPNDITFLCVLTACSHAGLLDEGQYYFDL 435

Query: 436 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKPTAAVWGALLGSCRMHKNMDL 495
                                               PI+PTAAVWGALLG+CRMHKN+DL
Sbjct: 436 MKSYNIELQISHYVTIVDLLGRAGLLDRAAKFIREMPIEPTAAVWGALLGACRMHKNIDL 495

Query: 496 GVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIEN 555
           G YAAE++FELDPHDSGPHVLLSNIYASAGRLSDAA+VRK+MK+ GVKKEPACSWVEIEN
Sbjct: 496 GAYAAERVFELDPHDSGPHVLLSNIYASAGRLSDAARVRKLMKDCGVKKEPACSWVEIEN 555

Query: 556 EVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEK 615
            VH+FVANDD+HP R EI +MWE ISGKIK+IGYVPDTSHVLFF++QQ+RE+KLQYHSEK
Sbjct: 556 AVHMFVANDDAHPQRVEILQMWETISGKIKDIGYVPDTSHVLFFVDQQEREVKLQYHSEK 615

Query: 616 LALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCS 675
           LALAFA+L T PG TIRIKKNIR+CGDCHSA K+ S+V GREIIVRDTNRFHHF +G CS
Sbjct: 616 LALAFALLNTTPGSTIRIKKNIRVCGDCHSAIKYVSKVEGREIIVRDTNRFHHFRNGSCS 668

Query: 676 CRDYW 679
           CRDYW
Sbjct: 676 CRDYW 668

[Close]

BLAST of CsaV3_1G015380 vs. TrEMBL
Match: tr|A0A2I4F8Q9|A0A2I4F8Q9_9ROSI (pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Juglans regia OX=51240 GN=LOC108996547 PE=4 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 1.6e-181
Identity = 381/644 (59.16%), Postives = 448/644 (69.57%), Query Frame = 0


Query: 35  FAAKYGTPCAFVESNTAESQDWDPCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLD 94
           F A    P   ++S  +E    D C +    ++QD+DLLR      S T ++ TGL VLD
Sbjct: 20  FGACATAPATLIDSEVSEG---DCCASDCGIIVQDKDLLR-----KSRTHNSPTGLLVLD 79

Query: 95  LINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCG 154
           LI+ GSLEP+RTLY+++L KCT L  +K+G+A+H HI  S F DDLV+LN +LNMYAK G
Sbjct: 80  LIDRGSLEPDRTLYNRLLKKCTQLGMVKEGKAVHFHILRSEFSDDLVILNSVLNMYAKFG 139

Query: 155 SLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLK 214
           +L++A+ LF +MP KD+VSWT LI+GYSQ+ +A +AL LFP+ML LGFQPN+FTLSSLLK
Sbjct: 140 ALDDARKLFGEMPCKDVVSWTALIAGYSQNDRAEDALILFPQMLQLGFQPNQFTLSSLLK 199

Query: 215 ASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVS 274
           ASG GP D HGRQLHAFS KYGYD NV+VGSSL+DMYAR+  + EA++IF+ L +KN VS
Sbjct: 200 ASGAGPDDKHGRQLHAFSFKYGYDSNVYVGSSLVDMYARFGLLDEAQLIFDELESKNEVS 259

Query: 275 WNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLXXXXXXXXXXX 334
           WNALIAGHARKG+GEH + LF +M R+   PT FTYSSVF+ACAS+GSL           
Sbjct: 260 WNALIAGHARKGQGEHALSLFREMQREDLRPTQFTYSSVFSACASTGSLEQGKWVHAHMT 319

Query: 335 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 394
                                                                       
Sbjct: 320 KSGVKLVAFVGNTLLDMYSKSGSIEDATKVFDRLGKRDLVSWNSMLKGYARHGLGKETLE 379

Query: 395 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 454
                                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 380 RFEEMLRIPIQPNDVTFLCVLHACSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 439

Query: 455 XXXXXXXXXXXXXXXPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVL 514
           XXXXXXXX       PI+PTAAVW ALLG+CRMHKNMDLG YAAE++FELDP+DSGPHVL
Sbjct: 440 XXXXXXXXLKFISEMPIEPTAAVWKALLGACRMHKNMDLGAYAAERVFELDPYDSGPHVL 499

Query: 515 LSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRM 574
           LSNIYASAGR  D  KVRKMMKESGVKK+PACSWVEIEN VH+FV+NDD+H  R+EI+R 
Sbjct: 500 LSNIYASAGRWDDVMKVRKMMKESGVKKQPACSWVEIENTVHLFVSNDDAHLQRDEIRRK 559

Query: 575 WEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKN 634
           WE+I GKIKEIGYVPDTSHVL F+++ ++E KLQ HSEKLALAFA+LKTPPG TIRIKKN
Sbjct: 560 WEEILGKIKEIGYVPDTSHVLLFVDEHEKEEKLQCHSEKLALAFALLKTPPGSTIRIKKN 619

Query: 635 IRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
           IR+CGDCHSA KFAS+V+ REIIVRDTNRFH F  G CSC DYW
Sbjct: 620 IRVCGDCHSAIKFASKVVDREIIVRDTNRFHRFSDGSCSCGDYW 655

The following BLAST results are available for this feature:

BLAST of CsaV3_1G015380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139511.1	4.1e-301	100.00	PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-...	[more]
XP_008464284.1	7.3e-274	93.83	PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial ...	[more]
XP_008464285.1	3.8e-254	94.09	PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial ...	[more]
XP_022142695.1	8.1e-241	76.54	pentatricopeptide repeat-containing protein At3g24000, mitochondrial [Momordica ...	[more]
XP_022973115.1	1.1e-240	86.47	pentatricopeptide repeat-containing protein At3g24000, mitochondrial [Cucurbita ...	[more]

BLAST of CsaV3_1G015380 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24000.1	1.9e-146	55.43	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G13770.1	6.5e-91	32.22	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G22070.1	4.3e-87	30.07	pentatricopeptide (PPR) repeat-containing protein	[more]
AT4G21065.1	1.7e-83	38.46	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G33170.1	3.8e-83	30.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CsaV3_1G015380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LIQ7\|PP252_ARATH	3.1e-151	55.57	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop...	[more]
sp\|Q9LIC3\|PP227_ARATH	1.2e-89	32.22	Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS...	[more]
sp\|Q9SHZ8\|PP168_ARATH	7.8e-86	30.07	Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX...	[more]
sp\|A8MQA3\|PP330_ARATH	3.1e-82	38.46	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9SMZ2\|PP347_ARATH	6.9e-82	30.50	Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX...	[more]

BLAST of CsaV3_1G015380 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LSV8\|A0A0A0LSV8_CUCSA	2.7e-301	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G171070 PE=4 SV=1	[more]
tr\|A0A1S3CMN0\|A0A1S3CMN0_CUCME	4.8e-274	93.83	pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 ...	[more]
tr\|A0A1S3CL86\|A0A1S3CL86_CUCME	2.5e-254	94.09	pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X2 ...	[more]
tr\|A0A251PDH0\|A0A251PDH0_PRUPE	3.4e-187	52.33	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G001500 PE=4 SV=1	[more]
tr\|A0A2I4F8Q9\|A0A2I4F8Q9_9ROSI	1.6e-181	59.16	pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Juglans ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR032867	DYW_dom
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006230	TMP biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004797	thymidine kinase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G015380.1	CsaV3_1G015380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 222..370 e-value: 6.4E-31 score: 109.8 coord: 371..608 e-value: 1.4E-33 score: 118.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 79..221 e-value: 1.2E-25 score: 92.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 348..406 coord: 106..197 coord: 441..531
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 544..667 e-value: 1.5E-38 score: 131.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 448..469 e-value: 0.65 score: 10.3 coord: 517..540 e-value: 0.14 score: 12.4 coord: 346..371 e-value: 8.3E-4 score: 19.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 270..318 e-value: 1.2E-13 score: 50.9 coord: 372..419 e-value: 3.3E-13 score: 49.5 coord: 169..215 e-value: 1.0E-10 score: 41.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 273..306 e-value: 1.8E-7 score: 28.9 coord: 346..374 e-value: 8.0E-5 score: 20.6 coord: 172..206 e-value: 1.2E-5 score: 23.2 coord: 374..408 e-value: 1.7E-8 score: 32.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 170..204 score: 12.31
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 306..340 score: 8.561
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 139..169 score: 9.328
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 372..406 score: 12.912
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 271..305 score: 12.233
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 341..371 score: 7.618
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 104..138 score: 5.086
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 508..542 score: 8.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 240..270 score: 5.711
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 442..476 score: 6.489
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 407..441 score: 8.977
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 234..573
None	No IPR available	PANTHER	PTHR24015:SF1015	SUBFAMILY NOT NAMED	coord: 234..573
None	No IPR available	PANTHER	PTHR24015:SF1015	SUBFAMILY NOT NAMED	coord: 88..230
None	No IPR available	PANTHER	PTHR24015:SF1015	SUBFAMILY NOT NAMED	coord: 159..310
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 159..310
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 88..230

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G015380	CSPI01G15240	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G015380	CSPI06G32950	Wild cucumber (PI 183967)	cpicucB318
CsaV3_1G015380	Cucsa.319460	Cucumber (Gy14) v1	cgycucB496
CsaV3_1G015380	CmaCh07G003530	Cucurbita maxima (Rimu)	cmacucB1004
CsaV3_1G015380	CmoCh13G003470	Cucurbita moschata (Rifu)	cmocucB0239
CsaV3_1G015380	CsGy1G015020	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G015380	Cla014398	Watermelon (97103) v1	cucwmB064
CsaV3_1G015380	Cla011015	Watermelon (97103) v1	cucwmB049
CsaV3_1G015380	MELO3C026082	Melon (DHL92) v3.5.1	cucmeB016
CsaV3_1G015380	ClCG01G011380	Watermelon (Charleston Gray)	cucwcgB024
CsaV3_1G015380	ClCG01G021380	Watermelon (Charleston Gray)	cucwcgB029
CsaV3_1G015380	Lsi02G011750	Bottle gourd (USVL1VR-Ls)	cuclsiB033
CsaV3_1G015380	Lsi01G004860	Bottle gourd (USVL1VR-Ls)	cuclsiB017
CsaV3_1G015380	MELO3C026082.2	Melon (DHL92) v3.6.1	cucmedB015
CsaV3_1G015380	Cla97C01G011030	Watermelon (97103) v2	cucwmbB008

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_1G015380	CsaV3_6G048410	Cucumber (Chinese Long) v3	cuccucB053

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G015380	Cucurbita maxima (Rimu)	cmacucB0253
CsaV3_1G015380	Cucurbita maxima (Rimu)	cmacucB0476
CsaV3_1G015380	Cucurbita moschata (Rifu)	cmocucB0472
CsaV3_1G015380	Cucurbita pepo (Zucchini)	cpecucB0632
CsaV3_1G015380	Bottle gourd (USVL1VR-Ls)	cuclsiB044
CsaV3_1G015380	Melon (DHL92) v3.5.1	cucmeB029
CsaV3_1G015380	Melon (DHL92) v3.6.1	cucmedB025
CsaV3_1G015380	Wax gourd	cucwgoB039