Cla011953 (gene) Watermelon (97103) v1

Overview
NameCla011953
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionChaperone protein DnaJ (AHRD V1 *-*- B4U645_HYDS0); contains Interpro domain(s) IPR015609 Molecular chaperone, heat shock protein, Hsp40, DnaJ
LocationChr11 : 4348332 .. 4349925 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCCTCTCCAATTCCCAATTCTCTCCTCTTTCACAGAACCTTCCACTCGCCTACTCGCACATTCCATACATGGCGGGTCTATGCATCTCAAGCTCCCAACAACGATCGCCAAAGACCACCACCGGGGGTCGACACAAGAATTCATTGGCAAAACGAAGAGGAAGGTTGGATTGGAGGCCAGAAAAAGGAGACCAATGATCATAATAATAATAATAATATCTTGGGTCCAAGTTTGGCCGATTTGCTCAACAACTCATCCGATTCTCACTACCAGTACGTGAATAGTGATAATTCTTCGTGTATTCTGCCATTTCTTTTCTTTCTTCTCCAGTTTTTTTCAATTCTTTCCGGGTAGTTCGAGATTTTATTGCAACTGATTAATTATGGTAGTTTGAGTTCTTACTTCTTGGAGTAGTTTTGAAAAATTGGATTAAAAGAGAAGAAAATGTCTAAGCATAAAAGAAAGAAAAGAGAAAAGGGGGAAAAAAAAGCCTAATCCTCATCTTCTACTTCTACCTCTCCCTCCCAACCGTTGACCCCTTTTTCCCCTTTACTGTTCATCTCCTTCTCCGGCGTCAGTCCCTCTCTGCAGCGTGTCTCCCGCGACCTTCAGCGGCTGCGTGCGGTTCTCCCATGTCGACTGCAGGCAGTGGCGTCTTCTTCAAAGGGTTATTTAACGTTGAGTTCCACACTCAAGGACTTAAGTTTTTCTTCTTCTTCTTTTTTTTTTTGACTTAAGTTTTTCTTCTTCTTCTTTCTTTTTAAGTACAATAATACAATAATGCCTGGGATGGAGATCCAATTTTCTTTTTATTAAGTACAAATAAGGAAGAAAACCATATCAATTATTGTTAAATTAAGTTCATTTTGGCCAAACAAAACTTTGTCAAATTTGGATAATAATCAATTGTATACTAACATATTGAACATTTATAGGTGATAGATTTTATTACTAATAAAAGCTCCTATTAGCAATAGAGTCCCAGAACTTGATCTAAAATTTGCTATATTTGTAAATTCTTTTTTATTTAGCTATATCGACTTGGTCTAAAATTTGTTATATTTGCTATATGGACTAATATTTTGAACCTAATTGCTATTTTGCCGTAGATAATTATTTGTTGTGGTGGAAGTTGTGTATATATGTGTGTGTGTGGAACAGGTTCTTAGGGGTGGGTGCAGAGGCTGAGCTAGAAGAGATAAAAAGTGCATATCGGAGATTAACAAAAGAATACCATCCAGACACCACCTCTCTCCCCCTAAAAGCTGCGTCCGAGAAATTCATGAAATTGAAACAAGTGTACGAGGTCCTGAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGACAAATTGAGGATTAAATTGGAAGATCCTTACGAGCAGGAGTTGCAAAACTGGAAATCCACTCCAGACATGGTCGATCGCCTTGCAGGAAGGAACATGGAATTGAGTGATCAATCCACCGCAGCTCTTACCGTTGACATCCTTATCATTCTCTTTGCAATAGCCTGTATTGTTTATGTCCTGCTTTTTAAAGAACCATATTATTATTGA

mRNA sequence

ATGGCCTCCTCTCCAATTCCCAATTCTCTCCTCTTTCACAGAACCTTCCACTCGCCTACTCGCACATTCCATACATGGCGGGTCTATGCATCTCAAGCTCCCAACAACGATCGCCAAAGACCACCACCGGGGGTCGACACAAGAATTCATTGGCAAAACGAAGAGGAAGGTTGGATTGGAGGCCAGAAAAAGGAGACCAATGATCATAATAATAATAATAATATCTTGGGTCCAAGTTTGGCCGATTTGCTCAACAACTCATCCGATTCTCACTACCAGTTCTTAGGGGTGGGTGCAGAGGCTGAGCTAGAAGAGATAAAAAGTGCATATCGGAGATTAACAAAAGAATACCATCCAGACACCACCTCTCTCCCCCTAAAAGCTGCGTCCGAGAAATTCATGAAATTGAAACAAGTGTACGAGGTCCTGAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGACAAATTGAGGATTAAATTGGAAGATCCTTACGAGCAGGAGTTGCAAAACTGGAAATCCACTCCAGACATGGTCGATCGCCTTGCAGGAAGGAACATGGAATTGAGTGATCAATCCACCGCAGCTCTTACCGTTGACATCCTTATCATTCTCTTTGCAATAGCCTGTATTGTTTATGTCCTGCTTTTTAAAGAACCATATTATTATTGA

Coding sequence (CDS)

ATGGCCTCCTCTCCAATTCCCAATTCTCTCCTCTTTCACAGAACCTTCCACTCGCCTACTCGCACATTCCATACATGGCGGGTCTATGCATCTCAAGCTCCCAACAACGATCGCCAAAGACCACCACCGGGGGTCGACACAAGAATTCATTGGCAAAACGAAGAGGAAGGTTGGATTGGAGGCCAGAAAAAGGAGACCAATGATCATAATAATAATAATAATATCTTGGGTCCAAGTTTGGCCGATTTGCTCAACAACTCATCCGATTCTCACTACCAGTTCTTAGGGGTGGGTGCAGAGGCTGAGCTAGAAGAGATAAAAAGTGCATATCGGAGATTAACAAAAGAATACCATCCAGACACCACCTCTCTCCCCCTAAAAGCTGCGTCCGAGAAATTCATGAAATTGAAACAAGTGTACGAGGTCCTGAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGACAAATTGAGGATTAAATTGGAAGATCCTTACGAGCAGGAGTTGCAAAACTGGAAATCCACTCCAGACATGGTCGATCGCCTTGCAGGAAGGAACATGGAATTGAGTGATCAATCCACCGCAGCTCTTACCGTTGACATCCTTATCATTCTCTTTGCAATAGCCTGTATTGTTTATGTCCTGCTTTTTAAAGAACCATATTATTATTGA

Protein sequence

MASSPIPNSLLFHRTFHSPTRTFHTWRVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQKKETNDHNNNNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMELSDQSTAALTVDILIILFAIACIVYVLLFKEPYYY
Homology
[Close]
BLAST of Cla011953 vs. Swiss-Prot
Match: NDHT_ARATH (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana GN=ndhT PE=1 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.4e-74
Identity = 134/209 (64.11%), Postives = 166/209 (79.43%), Query Frame = 1 

Query: 27  RVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQKKETN--DHNNNNNILGPSLADLL 86
           R+YASQ P     +P PGVDTRIHW++ +EGWIGG+       D +  N +     A+L+
Sbjct: 42  RIYASQGPTKP-SKPSPGVDTRIHWESPDEGWIGGRSDPAKSVDEDKTNLLSDEKFAELI 101

Query: 87  NNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVLS 146
            +S DSHYQFLGV  +A+LEEIKSAYRRL+KEYHPDTTSLPLK ASEKFMKL++VY VLS
Sbjct: 102 KDSFDSHYQFLGVSTDADLEEIKSAYRRLSKEYHPDTTSLPLKTASEKFMKLREVYNVLS 161

Query: 147 NEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMELSDQS 206
           +EE+R+FYDWTLAQE ASRQA+K+R+KLEDP EQ+ + ++S PDMVDRL GRNMELSDQ+
Sbjct: 162 DEETRRFYDWTLAQEVASRQAEKMRMKLEDPKEQDFRGYESIPDMVDRLGGRNMELSDQA 221

Query: 207 TAALTVDILIILFAIACIVYVLLFKEPYY 234
             ALT DILI+LFA+ CI +V++FK+P Y
Sbjct: 222 MTALTFDILIVLFAVCCIAFVIVFKDPSY 249

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BLAST of Cla011953 vs. Swiss-Prot
Match: DNAJ_HYDTT (Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.7e-12
Identity = 41/97 (42.27%), Postives = 55/97 (56.70%), Query Frame = 1 

Query: 91  HYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVLSNEESRK 150
           +YQ LGV  +A  EEIK AYRRL KEYHPD ++   + ASEKF ++ + Y +LS+EE RK
Sbjct: 6   YYQILGVSKDATAEEIKKAYRRLAKEYHPDISA--DENASEKFKEINEAYHILSDEERRK 65

Query: 151 FYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTP 188
            YD  L   +     D +   ++D  E   Q  + +P
Sbjct: 66  EYDRILKSGDEKSYRDFMEY-IQDFLESIWQGMRRSP 99

[Close]
BLAST of Cla011953 vs. Swiss-Prot
Match: DNAJ_GEOKA (Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 1 

Query: 91  HYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVLSNEESRK 150
           +Y+ LGV   A  +EIK AYR+L+K+YHPD    P   A+EKF ++K+ YEVLS++E R 
Sbjct: 6   YYEILGVSKNATKDEIKKAYRKLSKQYHPDVNKAP--DAAEKFKEIKEAYEVLSDDEKRA 65

Query: 151 FYD 154
            YD
Sbjct: 66  RYD 66

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BLAST of Cla011953 vs. Swiss-Prot
Match: DNAJ_GEOSE (Chaperone protein DnaJ OS=Geobacillus stearothermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 1 

Query: 91  HYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVLSNEESRK 150
           +Y+ LGV   A  EEIK AYR+L+K+YHPD    P   A+EKF ++K+ YEVLS+++ R 
Sbjct: 6   YYEILGVSKNATKEEIKKAYRKLSKKYHPDVNKEP--DAAEKFKEIKEAYEVLSDDQKRA 65

Query: 151 FYD 154
            YD
Sbjct: 66  HYD 66

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BLAST of Cla011953 vs. Swiss-Prot
Match: DNAJ_GEOSW (Chaperone protein DnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-10
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 1 

Query: 91  HYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVLSNEESRK 150
           +Y+ LGV   A  EEIK AYR+L+K+YHPD    P   A+EKF ++K+ YEVLS+++ R 
Sbjct: 6   YYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEP--DAAEKFKEIKEAYEVLSDDQKRA 65

Query: 151 FYD 154
            YD
Sbjct: 66  HYD 66

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BLAST of Cla011953 vs. TrEMBL
Match: A0A0A0LT25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042670 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 1.9e-115
Identity = 205/234 (87.61%), Postives = 219/234 (93.59%), Query Frame = 1 

Query: 1   MASSPIPNSLLFHRTFHSPTRTFHTWRVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIG 60
           MAS P PNSLLFH+TFHS   TF TWRVYA+QAPNNDR+RPPPGVDTRIHWQNEEEGWIG
Sbjct: 1   MASPPFPNSLLFHKTFHSSAPTFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 61  GQKKETNDHNN-NNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHP 120
            +KKE+ND NN +NN+LGPSLADLLNNSSDSHYQFLGV AEAE+EEIKSAYRRL+KEYHP
Sbjct: 61  RKKKESNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHP 120

Query: 121 DTTSLPLKAASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQE 180
           DTTSLPLK ASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLR+KLEDPYEQE
Sbjct: 121 DTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQE 180

Query: 181 LQNWKSTPDMVDRLAGRNMELSDQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           LQNW STPDMVDRL GRN+ELSDQ++ ALT+DI IILFAIACIVYVLLFKEPYY
Sbjct: 181 LQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEPYY 234

[Close]
BLAST of Cla011953 vs. TrEMBL
Match: A0A0F7H024_9ROSI (Chaperone DnaJ-domain superfamily protein (Fragment) OS=Melianthus villosus GN=NDHT PE=2 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 6.2e-82
Identity = 146/219 (66.67%), Postives = 182/219 (83.11%), Query Frame = 1 

Query: 20  TRTFHTWRVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQKKET-----NDHNNNNN 79
           TR  +  R++AS      RQR PPGVDTRIHW+NE+EGWIGG   +T     N      N
Sbjct: 13  TRRVYRLRIFASSEQPYKRQRAPPGVDTRIHWENEDEGWIGGNSSQTSQSKLNAEEEEKN 72

Query: 80  ILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFM 139
           +LG   A+LLN+SSDSHYQFLGV A+A+LEEIK+AYR+L+KEYHPDTTSLPLKAAS+KFM
Sbjct: 73  LLGEKFAELLNDSSDSHYQFLGVEAQADLEEIKTAYRKLSKEYHPDTTSLPLKAASDKFM 132

Query: 140 KLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLA 199
           KL+++Y+VLSN+ESR+FYDWTLAQE ASRQA+K+R+KLEDPY+QEL  ++S PD+VDRL 
Sbjct: 133 KLREIYDVLSNDESRRFYDWTLAQEAASRQAEKMRMKLEDPYQQELDKYESVPDLVDRLG 192

Query: 200 GRNMELSDQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           G+N++LSDQ++ ALT+DI II+FAI CIVYVL+FKEPYY
Sbjct: 193 GKNLKLSDQASTALTIDIAIIIFAICCIVYVLIFKEPYY 231

[Close]
BLAST of Cla011953 vs. TrEMBL
Match: A0A061EBG7_THECC (Chaperone DnaJ-domain superfamily protein OS=Theobroma cacao GN=TCM_011554 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.4e-81
Identity = 150/212 (70.75%), Postives = 175/212 (82.55%), Query Frame = 1 

Query: 28  VYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQKKETNDHNN------NNNILGPSLA 87
           V ASQ P+  RQR PPGVDTRIHW NE+EGWIGG  K               N+LG   A
Sbjct: 89  VLASQGPSG-RQRAPPGVDTRIHWDNEDEGWIGGSSKSQQTEEKLGAEEQQKNLLGEKFA 148

Query: 88  DLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYE 147
           DLLN+SSDSHYQFLGV AEA+LEE+K+AYRRL+KEYHPDTTSLPLKAASEKFMKL++VY 
Sbjct: 149 DLLNDSSDSHYQFLGVSAEADLEEVKAAYRRLSKEYHPDTTSLPLKAASEKFMKLREVYN 208

Query: 148 VLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMELS 207
           VLS+EESR+FYDWTLAQE ASR+A+KLRI+LEDPY+Q+L+N+K  PDMVDRL GRNMELS
Sbjct: 209 VLSSEESRRFYDWTLAQEAASRKAEKLRIRLEDPYQQDLRNYKPKPDMVDRLGGRNMELS 268

Query: 208 DQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           DQ+  ALT D+ +I+FAI CI+YVL+FKEPYY
Sbjct: 269 DQAMTALTFDVFVIIFAICCIIYVLVFKEPYY 299

[Close]
BLAST of Cla011953 vs. TrEMBL
Match: A0A103XGU1_CYNCS (DnaJ domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_007539 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 8.9e-81
Identity = 142/213 (66.67%), Postives = 179/213 (84.04%), Query Frame = 1 

Query: 27  RVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQ------KKETNDHNNNNNILGPSL 86
           R+YA++    +RQR PPGVDTRIHW+NE+EGW+GG       +K   +    NN+LG   
Sbjct: 43  RIYAAEG-GGERQRAPPGVDTRIHWENEDEGWVGGSGSGNTTRKVEEEEEQTNNLLGEKF 102

Query: 87  ADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVY 146
           ++LLNNS+DSHYQFLGV AEA+LEEIK+AYRRL+KEYHPDTTSLPLKAASE FMKL++VY
Sbjct: 103 SELLNNSTDSHYQFLGVPAEADLEEIKAAYRRLSKEYHPDTTSLPLKAASEMFMKLREVY 162

Query: 147 EVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMEL 206
           +VLSN E R+FYDWTLAQE ASR+A+K+R++LEDPY ++++NW+S PDMVDRL GRNMEL
Sbjct: 163 DVLSNSEKRRFYDWTLAQEAASREAEKMRVRLEDPYMKDIENWESVPDMVDRLGGRNMEL 222

Query: 207 SDQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           SDQ+ +ALT DI II+F+I CI+YV++FKEPYY
Sbjct: 223 SDQAKSALTFDIFIIIFSICCIIYVVVFKEPYY 254

[Close]
BLAST of Cla011953 vs. TrEMBL
Match: W9RNY0_9ROSA (Chaperone protein DnaJ OS=Morus notabilis GN=L484_025453 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 4.4e-80
Identity = 143/225 (63.56%), Postives = 180/225 (80.00%), Query Frame = 1 

Query: 19  PTRTFHT-----WRVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQKKETND----- 78
           PTRT+H       R  + + P   R+R PPGVDTRIHW NE+EGW+GG    +       
Sbjct: 29  PTRTWHVNVRFLVRAVSGEGPRK-RERSPPGVDTRIHWDNEDEGWVGGSSSSSTSTSGQA 88

Query: 79  HNNNNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKA 138
           H++  N+LG   ADLLN S+DSHYQFLGV  EA+LEEIK+AYRRL+KEYHPDTTSLPLKA
Sbjct: 89  HDDQKNLLGEKFADLLNQSADSHYQFLGVSVEADLEEIKAAYRRLSKEYHPDTTSLPLKA 148

Query: 139 ASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPD 198
           AS+KF++L++VY+VLSNEESR+FYDWTLAQE ASRQA+K+R+KLEDPYEQ+L+N++  P+
Sbjct: 149 ASDKFLRLREVYDVLSNEESRRFYDWTLAQEAASRQAEKMRVKLEDPYEQDLRNYEPVPE 208

Query: 199 MVDRLAGRNMELSDQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           +VDRL GRNM+LSDQ+  ALT D+ I++FAI CI+YV+ FKEPYY
Sbjct: 209 VVDRLGGRNMDLSDQAMTALTFDVFIVVFAICCIIYVIFFKEPYY 252

[Close]
BLAST of Cla011953 vs. NCBI nr
Match: gi|659066817|ref|XP_008462782.1| (PREDICTED: dnaJ homolog subfamily B member 12 [Cucumis melo])

HSP 1 Score: 436.4 bits (1121), Expect = 3.1e-119
Identity = 210/234 (89.74%), Postives = 223/234 (95.30%), Query Frame = 1 

Query: 1   MASSPIPNSLLFHRTFHSPTRTFHTWRVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIG 60
           MASSP PNSLLFH+TFHSP   F TWRVYA+QAPNNDR+RPPPGVDTRIHWQNEEEGWIG
Sbjct: 1   MASSPFPNSLLFHKTFHSPAPAFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 61  GQKKETNDHNN-NNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHP 120
           G+KKE+ND NN +NN+LGPSLADLLNNSSDSHYQFLGVGAEAE+EEIKSAYRRL+KEYHP
Sbjct: 61  GKKKESNDQNNESNNMLGPSLADLLNNSSDSHYQFLGVGAEAEVEEIKSAYRRLSKEYHP 120

Query: 121 DTTSLPLKAASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQE 180
           DTTSLPLK ASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQE
Sbjct: 121 DTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQE 180

Query: 181 LQNWKSTPDMVDRLAGRNMELSDQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           LQNW+STPDMVDRL GRNMELSDQ+T ALT+DI IILFAIACIVYVL+FKEPYY
Sbjct: 181 LQNWQSTPDMVDRLGGRNMELSDQATTALTLDIFIILFAIACIVYVLIFKEPYY 234

[Close]
BLAST of Cla011953 vs. NCBI nr
Match: gi|449439697|ref|XP_004137622.1| (PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 423.3 bits (1087), Expect = 2.7e-115
Identity = 205/234 (87.61%), Postives = 219/234 (93.59%), Query Frame = 1 

Query: 1   MASSPIPNSLLFHRTFHSPTRTFHTWRVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIG 60
           MAS P PNSLLFH+TFHS   TF TWRVYA+QAPNNDR+RPPPGVDTRIHWQNEEEGWIG
Sbjct: 1   MASPPFPNSLLFHKTFHSSAPTFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 61  GQKKETNDHNN-NNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHP 120
            +KKE+ND NN +NN+LGPSLADLLNNSSDSHYQFLGV AEAE+EEIKSAYRRL+KEYHP
Sbjct: 61  RKKKESNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHP 120

Query: 121 DTTSLPLKAASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQE 180
           DTTSLPLK ASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLR+KLEDPYEQE
Sbjct: 121 DTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQE 180

Query: 181 LQNWKSTPDMVDRLAGRNMELSDQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           LQNW STPDMVDRL GRN+ELSDQ++ ALT+DI IILFAIACIVYVLLFKEPYY
Sbjct: 181 LQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEPYY 234

[Close]
BLAST of Cla011953 vs. NCBI nr
Match: gi|590699286|ref|XP_007045885.1| (Chaperone DnaJ-domain superfamily protein [Theobroma cacao])

HSP 1 Score: 310.8 bits (795), Expect = 2.0e-81
Identity = 150/212 (70.75%), Postives = 175/212 (82.55%), Query Frame = 1 

Query: 28  VYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQKKETNDHNN------NNNILGPSLA 87
           V ASQ P+  RQR PPGVDTRIHW NE+EGWIGG  K               N+LG   A
Sbjct: 89  VLASQGPSG-RQRAPPGVDTRIHWDNEDEGWIGGSSKSQQTEEKLGAEEQQKNLLGEKFA 148

Query: 88  DLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYE 147
           DLLN+SSDSHYQFLGV AEA+LEE+K+AYRRL+KEYHPDTTSLPLKAASEKFMKL++VY 
Sbjct: 149 DLLNDSSDSHYQFLGVSAEADLEEVKAAYRRLSKEYHPDTTSLPLKAASEKFMKLREVYN 208

Query: 148 VLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMELS 207
           VLS+EESR+FYDWTLAQE ASR+A+KLRI+LEDPY+Q+L+N+K  PDMVDRL GRNMELS
Sbjct: 209 VLSSEESRRFYDWTLAQEAASRKAEKLRIRLEDPYQQDLRNYKPKPDMVDRLGGRNMELS 268

Query: 208 DQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           DQ+  ALT D+ +I+FAI CI+YVL+FKEPYY
Sbjct: 269 DQAMTALTFDVFVIIFAICCIIYVLVFKEPYY 299

[Close]
BLAST of Cla011953 vs. NCBI nr
Match: gi|976902566|gb|KVH90508.1| (DnaJ domain-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 308.1 bits (788), Expect = 1.3e-80
Identity = 142/213 (66.67%), Postives = 179/213 (84.04%), Query Frame = 1 

Query: 27  RVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQ------KKETNDHNNNNNILGPSL 86
           R+YA++    +RQR PPGVDTRIHW+NE+EGW+GG       +K   +    NN+LG   
Sbjct: 43  RIYAAEG-GGERQRAPPGVDTRIHWENEDEGWVGGSGSGNTTRKVEEEEEQTNNLLGEKF 102

Query: 87  ADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVY 146
           ++LLNNS+DSHYQFLGV AEA+LEEIK+AYRRL+KEYHPDTTSLPLKAASE FMKL++VY
Sbjct: 103 SELLNNSTDSHYQFLGVPAEADLEEIKAAYRRLSKEYHPDTTSLPLKAASEMFMKLREVY 162

Query: 147 EVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMEL 206
           +VLSN E R+FYDWTLAQE ASR+A+K+R++LEDPY ++++NW+S PDMVDRL GRNMEL
Sbjct: 163 DVLSNSEKRRFYDWTLAQEAASREAEKMRVRLEDPYMKDIENWESVPDMVDRLGGRNMEL 222

Query: 207 SDQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           SDQ+ +ALT DI II+F+I CI+YV++FKEPYY
Sbjct: 223 SDQAKSALTFDIFIIIFSICCIIYVVVFKEPYY 254

[Close]
BLAST of Cla011953 vs. NCBI nr
Match: gi|1012035862|ref|XP_015953139.1| (PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Arachis duranensis])

HSP 1 Score: 308.1 bits (788), Expect = 1.3e-80
Identity = 144/211 (68.25%), Postives = 182/211 (86.26%), Query Frame = 1 

Query: 27  RVYASQAPNNDRQRPP-PGVDTRIHWQNEEEGWIGGQKKE--TNDHNNNNNILGPSLADL 86
           +V AS+ P N R+ PP PGVDTRIHWQNE EGW+GG  K+  T D+ N  N+LG S ADL
Sbjct: 42  QVRASKGPGNKRRAPPSPGVDTRIHWQNENEGWVGGSNKQQSTADNKNPKNLLGESFADL 101

Query: 87  LNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVL 146
           L+ SS SHY+FLGV A+A+LEEIK+AYRRL+KEYHPDTTSLPLK+ASEKFMKL+++Y+VL
Sbjct: 102 LSASSGSHYEFLGVSADADLEEIKTAYRRLSKEYHPDTTSLPLKSASEKFMKLREIYDVL 161

Query: 147 SNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMELSDQ 206
           S+EESR FYDWTLAQE ASRQA+K++++LEDPYEQ+L++++S PDMVDRL G+NM+LSDQ
Sbjct: 162 SDEESRTFYDWTLAQEAASRQAEKIKMRLEDPYEQQLRSYESVPDMVDRLGGKNMKLSDQ 221

Query: 207 STAALTVDILIILFAIACIVYVLLFKEPYYY 235
           + +ALT+D+ II+FAI CI+YV +FK PYYY
Sbjct: 222 AVSALTIDVFIIVFAICCIIYVTIFKAPYYY 252

The following BLAST results are available for this feature:
BLAST of Cla011953 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NDHT_ARATH1.4e-7464.11NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana ... [more]
DNAJ_HYDTT5.7e-1242.27Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12... [more]
DNAJ_GEOKA1.1e-1050.79Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) GN=dnaJ PE=3 ... [more]
DNAJ_GEOSE1.4e-1050.79Chaperone protein DnaJ OS=Geobacillus stearothermophilus GN=dnaJ PE=3 SV=1[more]
DNAJ_GEOSW1.8e-1050.79Chaperone protein DnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ PE=3 SV=1[more]
BLAST of Cla011953 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT25_CUCSA1.9e-11587.61Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042670 PE=4 SV=1[more]
A0A0F7H024_9ROSI6.2e-8266.67Chaperone DnaJ-domain superfamily protein (Fragment) OS=Melianthus villosus GN=N... [more]
A0A061EBG7_THECC1.4e-8170.75Chaperone DnaJ-domain superfamily protein OS=Theobroma cacao GN=TCM_011554 PE=4 ... [more]
A0A103XGU1_CYNCS8.9e-8166.67DnaJ domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_00753... [more]
W9RNY0_9ROSA4.4e-8063.56Chaperone protein DnaJ OS=Morus notabilis GN=L484_025453 PE=4 SV=1[more]
BLAST of Cla011953 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659066817|ref|XP_008462782.1|3.1e-11989.74PREDICTED: dnaJ homolog subfamily B member 12 [Cucumis melo][more]
gi|449439697|ref|XP_004137622.1|2.7e-11587.61PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic isoform X1 [C... [more]
gi|590699286|ref|XP_007045885.1|2.0e-8170.75Chaperone DnaJ-domain superfamily protein [Theobroma cacao][more]
gi|976902566|gb|KVH90508.1|1.3e-8066.67DnaJ domain-containing protein [Cynara cardunculus var. scolymus][more]
gi|1012035862|ref|XP_015953139.1|1.3e-8068.25PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Arachis dura... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR018253DnaJ_domain_CS
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component GO:0005575 cellular_component
cellular_component GO:0005840 ribosome
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0010181 FMN binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla011953Cla011953.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainPRINTSPR00625JDOMAINcoord: 110..125
score: 1.2E-13coord: 92..110
score: 1.2E-13coord: 128..148
score: 1.2
IPR001623DnaJ domainGENE3DG3DSA:1.10.287.110coord: 87..153
score: 2.9
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 91..153
score: 1.7
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 89..148
score: 7.2
IPR001623DnaJ domainPROFILEPS50076DNAJ_2coord: 90..156
score: 17
IPR001623DnaJ domainunknownSSF46565Chaperone J-domaincoord: 85..156
score: 5.89
IPR018253DnaJ domain, conserved sitePROSITEPS00636DNAJ_1coord: 133..152
scor
NoneNo IPR availableunknownCoilCoilcoord: 126..146
score: -coord: 96..116
scor
NoneNo IPR availablePANTHERPTHR24078DNAJ HOMOLOG SUBFAMILY C MEMBERcoord: 74..153
score: 3.4
NoneNo IPR availablePANTHERPTHR24078:SF233DNAJ HOMOLOG SUBFAMILY C MEMBER 11coord: 74..153
score: 3.4