ClCG11G008560 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG11G008560
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Chaperone protein dnaJ
Location	CG_Chr11 : 12433930 .. 12435523 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCTCTCCAATTCCCAATTCTCTCCTCTTTCACAGAACCTTCCACTCGCCTACTCGCACATTCCATACATGGCGGGTCTATGCATCTCAAGCTCCCAACAACGATCGCCAAAGACCACCACCGGGGGTCGACACAAGAATTCATTGGCAAAACGAAGAGGAAGGTTGGATTGGAGGCCAGAAAAAGGAGACCAATGATCATAATAATAATAATAATATCTTGGGTCCAAGTTTGGCCGATTTGCTCAACAACTCATCCGATTCTCACTACCAGTACGTGAATAGTGATAATTCTTCGTGTATTCTGCCATTTCTTTTCTTTCTTCTCCAGTTTTTTTCAATTCTTTCCGGGTAGTTCGAGATTTTATTGCAACTGATTAATTATGGTAGTTTGAGTTCTTACTTCTTGGAGTAGTTTTGAAAAATTGGATTAAAAGAGAAGAAAATGTCTAAGCATAAAAGAAAGAAAAGAGAAAAGGGGGAAAAAAAAGCCTAATCCTCATCTTCTACTTCTACCTCTCCCTCCCAACCGTTGACCCCTTTTTCCCCTTTACTGTTCATCTCCTTCTCCGGCGTCAGTCCCTCTCTGCAGCGTGTCTCCCGCGACCTTCAGCGGCTGCGTGCGGTTCTCCCATGTCGACTGCAGGCAGTGGCGTCTTCTTCAAAGGGTTATTTAACGTTGAGTTCCACACTCAAGGACTTAAGTTTTTCTTCTTCTTCTTTTTTTTTTTGACTTAAGTTTTTCTTCTTCTTCTTTCTTTTTAAGTACAATAATACAATAATGCCTGGGATGGAGATCCAATTTTCTTTTTATTAAGTACAAATAAGGAAGAAAACCATATCAATTATTGTTAAATTAAGTTCATTTTGGCCAAACAAAACTTTGTCAAATTTGGATAATAATCAATTGTATACTAACATATTGAACATTTATAGGTGATAGATTTTATTACTAATAAAAGCTCCTATTAGCAATAGAGTCCCAGAACTTGATCTAAAATTTGCTATATTTGTAAATTCTTTTTTATTTAGCTATATCGACTTGGTCTAAAATTTGTTATATTTGCTATATGGACTAATATTTTGAACCTAATTGCTATTTTGCCGTAGATAATTATTTGTTGTGGTGGAAGTTGTGTATATATGTGTGTGTGTGGAACAGGTTCTTAGGGGTGGGTGCAGAGGCTGAGCTAGAAGAGATAAAAAGTGCATATCGGAGATTAACAAAAGAATACCATCCAGACACCACCTCTCTCCCCCTAAAAGCTGCGTCCGAGAAATTCATGAAATTGAAACAAGTGTACGAGGTCCTGAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGACAAATTGAGGATTAAATTGGAAGATCCTTACGAGCAGGAGTTGCAAAACTGGAAATCCACTCCAGACATGGTCGATCGCCTTGCAGGAAGGAACATGGAATTGAGTGATCAATCCACCGCAGCTCTTACCGTTGACATCCTTATCATTCTCTTTGCAATAGCCTGTATTGTTTATGTCCTGCTTTTTAAAGAACCATATTATTATTGA

mRNA sequence

ATGGCCTCCTCTCCAATTCCCAATTCTCTCCTCTTTCACAGAACCTTCCACTCGCCTACTCGCACATTCCATACATGGCGGGTCTATGCATCTCAAGCTCCCAACAACGATCGCCAAAGACCACCACCGGGGGTCGACACAAGAATTCATTGGCAAAACGAAGAGGAAGGTTGGATTGGAGGCCAGAAAAAGGAGACCAATGATCATAATAATAATAATAATATCTTGGGTCCAAGTTTGGCCGATTTGCTCAACAACTCATCCGATTCTCACTACCAGTTCTTAGGGGTGGGTGCAGAGGCTGAGCTAGAAGAGATAAAAAGTGCATATCGGAGATTAACAAAAGAATACCATCCAGACACCACCTCTCTCCCCCTAAAAGCTGCGTCCGAGAAATTCATGAAATTGAAACAAGTGTACGAGGTCCTGAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGACAAATTGAGGATTAAATTGGAAGATCCTTACGAGCAGGAGTTGCAAAACTGGAAATCCACTCCAGACATGGTCGATCGCCTTGCAGGAAGGAACATGGAATTGAGTGATCAATCCACCGCAGCTCTTACCGTTGACATCCTTATCATTCTCTTTGCAATAGCCTGTATTGTTTATGTCCTGCTTTTTAAAGAACCATATTATTATTGA

Coding sequence (CDS)

ATGGCCTCCTCTCCAATTCCCAATTCTCTCCTCTTTCACAGAACCTTCCACTCGCCTACTCGCACATTCCATACATGGCGGGTCTATGCATCTCAAGCTCCCAACAACGATCGCCAAAGACCACCACCGGGGGTCGACACAAGAATTCATTGGCAAAACGAAGAGGAAGGTTGGATTGGAGGCCAGAAAAAGGAGACCAATGATCATAATAATAATAATAATATCTTGGGTCCAAGTTTGGCCGATTTGCTCAACAACTCATCCGATTCTCACTACCAGTTCTTAGGGGTGGGTGCAGAGGCTGAGCTAGAAGAGATAAAAAGTGCATATCGGAGATTAACAAAAGAATACCATCCAGACACCACCTCTCTCCCCCTAAAAGCTGCGTCCGAGAAATTCATGAAATTGAAACAAGTGTACGAGGTCCTGAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGACAAATTGAGGATTAAATTGGAAGATCCTTACGAGCAGGAGTTGCAAAACTGGAAATCCACTCCAGACATGGTCGATCGCCTTGCAGGAAGGAACATGGAATTGAGTGATCAATCCACCGCAGCTCTTACCGTTGACATCCTTATCATTCTCTTTGCAATAGCCTGTATTGTTTATGTCCTGCTTTTTAAAGAACCATATTATTATTGA

Protein sequence

MASSPIPNSLLFHRTFHSPTRTFHTWRVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQKKETNDHNNNNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMELSDQSTAALTVDILIILFAIACIVYVLLFKEPYYY

Homology

[Close]

BLAST of ClCG11G008560 vs. Swiss-Prot
Match: NDHT_ARATH (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana GN=ndhT PE=1 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.4e-74
Identity = 134/209 (64.11%), Postives = 166/209 (79.43%), Query Frame = 1


Query: 27  RVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQKKETN--DHNNNNNILGPSLADLL 86
           R+YASQ P     +P PGVDTRIHW++ +EGWIGG+       D +  N +     A+L+
Sbjct: 42  RIYASQGPTKP-SKPSPGVDTRIHWESPDEGWIGGRSDPAKSVDEDKTNLLSDEKFAELI 101

Query: 87  NNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVLS 146
            +S DSHYQFLGV  +A+LEEIKSAYRRL+KEYHPDTTSLPLK ASEKFMKL++VY VLS
Sbjct: 102 KDSFDSHYQFLGVSTDADLEEIKSAYRRLSKEYHPDTTSLPLKTASEKFMKLREVYNVLS 161

Query: 147 NEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMELSDQS 206
           +EE+R+FYDWTLAQE ASRQA+K+R+KLEDP EQ+ + ++S PDMVDRL GRNMELSDQ+
Sbjct: 162 DEETRRFYDWTLAQEVASRQAEKMRMKLEDPKEQDFRGYESIPDMVDRLGGRNMELSDQA 221

Query: 207 TAALTVDILIILFAIACIVYVLLFKEPYY 234
             ALT DILI+LFA+ CI +V++FK+P Y
Sbjct: 222 MTALTFDILIVLFAVCCIAFVIVFKDPSY 249

[Close]

BLAST of ClCG11G008560 vs. Swiss-Prot
Match: DNAJ_HYDTT (Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.7e-12
Identity = 41/97 (42.27%), Postives = 55/97 (56.70%), Query Frame = 1


Query: 91  HYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVLSNEESRK 150
           +YQ LGV  +A  EEIK AYRRL KEYHPD ++   + ASEKF ++ + Y +LS+EE RK
Sbjct: 6   YYQILGVSKDATAEEIKKAYRRLAKEYHPDISA--DENASEKFKEINEAYHILSDEERRK 65

Query: 151 FYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTP 188
            YD  L   +     D +   ++D  E   Q  + +P
Sbjct: 66  EYDRILKSGDEKSYRDFMEY-IQDFLESIWQGMRRSP 99

[Close]

BLAST of ClCG11G008560 vs. Swiss-Prot
Match: DNAJ_GEOKA (Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 1


Query: 91  HYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVLSNEESRK 150
           +Y+ LGV   A  +EIK AYR+L+K+YHPD    P   A+EKF ++K+ YEVLS++E R 
Sbjct: 6   YYEILGVSKNATKDEIKKAYRKLSKQYHPDVNKAP--DAAEKFKEIKEAYEVLSDDEKRA 65

Query: 151 FYD 154
            YD
Sbjct: 66  RYD 66

[Close]

BLAST of ClCG11G008560 vs. Swiss-Prot
Match: DNAJ_GEOSE (Chaperone protein DnaJ OS=Geobacillus stearothermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 1


Query: 91  HYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVLSNEESRK 150
           +Y+ LGV   A  EEIK AYR+L+K+YHPD    P   A+EKF ++K+ YEVLS+++ R 
Sbjct: 6   YYEILGVSKNATKEEIKKAYRKLSKKYHPDVNKEP--DAAEKFKEIKEAYEVLSDDQKRA 65

Query: 151 FYD 154
            YD
Sbjct: 66  HYD 66

[Close]

BLAST of ClCG11G008560 vs. Swiss-Prot
Match: DNAJ_GEOSW (Chaperone protein DnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-10
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 1


Query: 91  HYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVLSNEESRK 150
           +Y+ LGV   A  EEIK AYR+L+K+YHPD    P   A+EKF ++K+ YEVLS+++ R 
Sbjct: 6   YYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEP--DAAEKFKEIKEAYEVLSDDQKRA 65

Query: 151 FYD 154
            YD
Sbjct: 66  HYD 66

[Close]

BLAST of ClCG11G008560 vs. TrEMBL
Match: A0A0A0LT25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042670 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 1.9e-115
Identity = 205/234 (87.61%), Postives = 219/234 (93.59%), Query Frame = 1


Query: 1   MASSPIPNSLLFHRTFHSPTRTFHTWRVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIG 60
           MAS P PNSLLFH+TFHS   TF TWRVYA+QAPNNDR+RPPPGVDTRIHWQNEEEGWIG
Sbjct: 1   MASPPFPNSLLFHKTFHSSAPTFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 61  GQKKETNDHNN-NNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHP 120
            +KKE+ND NN +NN+LGPSLADLLNNSSDSHYQFLGV AEAE+EEIKSAYRRL+KEYHP
Sbjct: 61  RKKKESNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHP 120

Query: 121 DTTSLPLKAASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQE 180
           DTTSLPLK ASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLR+KLEDPYEQE
Sbjct: 121 DTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQE 180

Query: 181 LQNWKSTPDMVDRLAGRNMELSDQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           LQNW STPDMVDRL GRN+ELSDQ++ ALT+DI IILFAIACIVYVLLFKEPYY
Sbjct: 181 LQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEPYY 234

[Close]

BLAST of ClCG11G008560 vs. TrEMBL
Match: A0A0F7H024_9ROSI (Chaperone DnaJ-domain superfamily protein (Fragment) OS=Melianthus villosus GN=NDHT PE=2 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 6.2e-82
Identity = 146/219 (66.67%), Postives = 182/219 (83.11%), Query Frame = 1


Query: 20  TRTFHTWRVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQKKET-----NDHNNNNN 79
           TR  +  R++AS      RQR PPGVDTRIHW+NE+EGWIGG   +T     N      N
Sbjct: 13  TRRVYRLRIFASSEQPYKRQRAPPGVDTRIHWENEDEGWIGGNSSQTSQSKLNAEEEEKN 72

Query: 80  ILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFM 139
           +LG   A+LLN+SSDSHYQFLGV A+A+LEEIK+AYR+L+KEYHPDTTSLPLKAAS+KFM
Sbjct: 73  LLGEKFAELLNDSSDSHYQFLGVEAQADLEEIKTAYRKLSKEYHPDTTSLPLKAASDKFM 132

Query: 140 KLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLA 199
           KL+++Y+VLSN+ESR+FYDWTLAQE ASRQA+K+R+KLEDPY+QEL  ++S PD+VDRL 
Sbjct: 133 KLREIYDVLSNDESRRFYDWTLAQEAASRQAEKMRMKLEDPYQQELDKYESVPDLVDRLG 192

Query: 200 GRNMELSDQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           G+N++LSDQ++ ALT+DI II+FAI CIVYVL+FKEPYY
Sbjct: 193 GKNLKLSDQASTALTIDIAIIIFAICCIVYVLIFKEPYY 231

[Close]

BLAST of ClCG11G008560 vs. TrEMBL
Match: A0A061EBG7_THECC (Chaperone DnaJ-domain superfamily protein OS=Theobroma cacao GN=TCM_011554 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.4e-81
Identity = 150/212 (70.75%), Postives = 175/212 (82.55%), Query Frame = 1


Query: 28  VYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQKKETNDHNN------NNNILGPSLA 87
           V ASQ P+  RQR PPGVDTRIHW NE+EGWIGG  K               N+LG   A
Sbjct: 89  VLASQGPSG-RQRAPPGVDTRIHWDNEDEGWIGGSSKSQQTEEKLGAEEQQKNLLGEKFA 148

Query: 88  DLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYE 147
           DLLN+SSDSHYQFLGV AEA+LEE+K+AYRRL+KEYHPDTTSLPLKAASEKFMKL++VY 
Sbjct: 149 DLLNDSSDSHYQFLGVSAEADLEEVKAAYRRLSKEYHPDTTSLPLKAASEKFMKLREVYN 208

Query: 148 VLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMELS 207
           VLS+EESR+FYDWTLAQE ASR+A+KLRI+LEDPY+Q+L+N+K  PDMVDRL GRNMELS
Sbjct: 209 VLSSEESRRFYDWTLAQEAASRKAEKLRIRLEDPYQQDLRNYKPKPDMVDRLGGRNMELS 268

Query: 208 DQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           DQ+  ALT D+ +I+FAI CI+YVL+FKEPYY
Sbjct: 269 DQAMTALTFDVFVIIFAICCIIYVLVFKEPYY 299

[Close]

BLAST of ClCG11G008560 vs. TrEMBL
Match: A0A103XGU1_CYNCS (DnaJ domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_007539 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 8.9e-81
Identity = 142/213 (66.67%), Postives = 179/213 (84.04%), Query Frame = 1


Query: 27  RVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQ------KKETNDHNNNNNILGPSL 86
           R+YA++    +RQR PPGVDTRIHW+NE+EGW+GG       +K   +    NN+LG   
Sbjct: 43  RIYAAEG-GGERQRAPPGVDTRIHWENEDEGWVGGSGSGNTTRKVEEEEEQTNNLLGEKF 102

Query: 87  ADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVY 146
           ++LLNNS+DSHYQFLGV AEA+LEEIK+AYRRL+KEYHPDTTSLPLKAASE FMKL++VY
Sbjct: 103 SELLNNSTDSHYQFLGVPAEADLEEIKAAYRRLSKEYHPDTTSLPLKAASEMFMKLREVY 162

Query: 147 EVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMEL 206
           +VLSN E R+FYDWTLAQE ASR+A+K+R++LEDPY ++++NW+S PDMVDRL GRNMEL
Sbjct: 163 DVLSNSEKRRFYDWTLAQEAASREAEKMRVRLEDPYMKDIENWESVPDMVDRLGGRNMEL 222

Query: 207 SDQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           SDQ+ +ALT DI II+F+I CI+YV++FKEPYY
Sbjct: 223 SDQAKSALTFDIFIIIFSICCIIYVVVFKEPYY 254

[Close]

BLAST of ClCG11G008560 vs. TrEMBL
Match: W9RNY0_9ROSA (Chaperone protein DnaJ OS=Morus notabilis GN=L484_025453 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 4.4e-80
Identity = 143/225 (63.56%), Postives = 180/225 (80.00%), Query Frame = 1


Query: 19  PTRTFHT-----WRVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQKKETND----- 78
           PTRT+H       R  + + P   R+R PPGVDTRIHW NE+EGW+GG    +       
Sbjct: 29  PTRTWHVNVRFLVRAVSGEGPRK-RERSPPGVDTRIHWDNEDEGWVGGSSSSSTSTSGQA 88

Query: 79  HNNNNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKA 138
           H++  N+LG   ADLLN S+DSHYQFLGV  EA+LEEIK+AYRRL+KEYHPDTTSLPLKA
Sbjct: 89  HDDQKNLLGEKFADLLNQSADSHYQFLGVSVEADLEEIKAAYRRLSKEYHPDTTSLPLKA 148

Query: 139 ASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPD 198
           AS+KF++L++VY+VLSNEESR+FYDWTLAQE ASRQA+K+R+KLEDPYEQ+L+N++  P+
Sbjct: 149 ASDKFLRLREVYDVLSNEESRRFYDWTLAQEAASRQAEKMRVKLEDPYEQDLRNYEPVPE 208

Query: 199 MVDRLAGRNMELSDQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           +VDRL GRNM+LSDQ+  ALT D+ I++FAI CI+YV+ FKEPYY
Sbjct: 209 VVDRLGGRNMDLSDQAMTALTFDVFIVVFAICCIIYVIFFKEPYY 252

[Close]

BLAST of ClCG11G008560 vs. TAIR10
Match: AT4G09350.1 (AT4G09350.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 280.8 bits (717), Expect = 7.7e-76
Identity = 134/209 (64.11%), Postives = 166/209 (79.43%), Query Frame = 1


Query: 27  RVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQKKETN--DHNNNNNILGPSLADLL 86
           R+YASQ P     +P PGVDTRIHW++ +EGWIGG+       D +  N +     A+L+
Sbjct: 42  RIYASQGPTKP-SKPSPGVDTRIHWESPDEGWIGGRSDPAKSVDEDKTNLLSDEKFAELI 101

Query: 87  NNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVLS 146
            +S DSHYQFLGV  +A+LEEIKSAYRRL+KEYHPDTTSLPLK ASEKFMKL++VY VLS
Sbjct: 102 KDSFDSHYQFLGVSTDADLEEIKSAYRRLSKEYHPDTTSLPLKTASEKFMKLREVYNVLS 161

Query: 147 NEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMELSDQS 206
           +EE+R+FYDWTLAQE ASRQA+K+R+KLEDP EQ+ + ++S PDMVDRL GRNMELSDQ+
Sbjct: 162 DEETRRFYDWTLAQEVASRQAEKMRMKLEDPKEQDFRGYESIPDMVDRLGGRNMELSDQA 221

Query: 207 TAALTVDILIILFAIACIVYVLLFKEPYY 234
             ALT DILI+LFA+ CI +V++FK+P Y
Sbjct: 222 MTALTFDILIVLFAVCCIAFVIVFKDPSY 249

[Close]

BLAST of ClCG11G008560 vs. TAIR10
Match: AT1G80030.1 (AT1G80030.1 Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 65.9 bits (159), Expect = 3.9e-11
Identity = 32/67 (47.76%), Postives = 41/67 (61.19%), Query Frame = 1


Query: 87  SSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVLSNE 146
           +S  +Y  LGV   A  +EIK+AYRRL ++YHPD    P   A+EKF ++   YEVLS+E
Sbjct: 72  TSGDYYATLGVSKSANNKEIKAAYRRLARQYHPDVNKEP--GATEKFKEISAAYEVLSDE 131

Query: 147 ESRKFYD 154
           + R  YD
Sbjct: 132 QKRALYD 136

[Close]

BLAST of ClCG11G008560 vs. TAIR10
Match: AT3G17830.1 (AT3G17830.1 Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 64.7 bits (156), Expect = 8.7e-11
Identity = 31/63 (49.21%), Postives = 38/63 (60.32%), Query Frame = 1


Query: 91  HYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVLSNEESRK 150
           HY  L V   A L+EIKS+YR+L ++YHPD    P   A +KF ++   YEVLS+EE R 
Sbjct: 64  HYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNP--GAEDKFKQISAAYEVLSDEEKRS 123

Query: 151 FYD 154
            YD
Sbjct: 124 AYD 124

[Close]

BLAST of ClCG11G008560 vs. TAIR10
Match: AT2G22360.1 (AT2G22360.1 DNAJ heat shock family protein)

HSP 1 Score: 62.4 bits (150), Expect = 4.3e-10
Identity = 30/63 (47.62%), Postives = 36/63 (57.14%), Query Frame = 1


Query: 91  HYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVLSNEESRK 150
           +Y  LGV   A   EIKSAYR+L + YHPD    P   A EKF ++   YEVLS++E + 
Sbjct: 87  YYSVLGVSKNATKAEIKSAYRKLARNYHPDVNKDP--GAEEKFKEISNAYEVLSDDEKKS 146

Query: 151 FYD 154
            YD
Sbjct: 147 LYD 147

[Close]

BLAST of ClCG11G008560 vs. TAIR10
Match: AT5G18140.1 (AT5G18140.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 62.4 bits (150), Expect = 4.3e-10
Identity = 43/141 (30.50%), Postives = 63/141 (44.68%), Query Frame = 1


Query: 26  WRVYASQAPNNDRQRP---PPGVDTRIHWQNEEEGWIGGQKKETNDHNNNNNILGPSLAD 85
           +R ++S + + D   P   P G D   H +   +G     K  +  + +   I   + + 
Sbjct: 15  YRRFSSSSFSGDLLPPSSNPIGRDLFPHRRRHRDG-----KSRSYRNRSKTTITSAAFSS 74

Query: 86  LLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEV 145
             N    +HY  LG+   A   +IK AYR L +++HPD        A E F  ++  YEV
Sbjct: 75  SSNTGGQNHYAVLGIARNATQGDIKRAYRLLARKFHPDVNK--DSKAGELFKSVRCSYEV 134

Query: 146 LSNEESRKFYDWTLAQEEASR 164
           LSNE +R  YD  L  +E SR
Sbjct: 135 LSNEATRTQYDRALKLQENSR 148

[Close]

BLAST of ClCG11G008560 vs. NCBI nr
Match: gi|659066817|ref|XP_008462782.1| (PREDICTED: dnaJ homolog subfamily B member 12 [Cucumis melo])

HSP 1 Score: 436.4 bits (1121), Expect = 3.1e-119
Identity = 210/234 (89.74%), Postives = 223/234 (95.30%), Query Frame = 1


Query: 1   MASSPIPNSLLFHRTFHSPTRTFHTWRVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIG 60
           MASSP PNSLLFH+TFHSP   F TWRVYA+QAPNNDR+RPPPGVDTRIHWQNEEEGWIG
Sbjct: 1   MASSPFPNSLLFHKTFHSPAPAFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 61  GQKKETNDHNN-NNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHP 120
           G+KKE+ND NN +NN+LGPSLADLLNNSSDSHYQFLGVGAEAE+EEIKSAYRRL+KEYHP
Sbjct: 61  GKKKESNDQNNESNNMLGPSLADLLNNSSDSHYQFLGVGAEAEVEEIKSAYRRLSKEYHP 120

Query: 121 DTTSLPLKAASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQE 180
           DTTSLPLK ASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQE
Sbjct: 121 DTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQE 180

Query: 181 LQNWKSTPDMVDRLAGRNMELSDQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           LQNW+STPDMVDRL GRNMELSDQ+T ALT+DI IILFAIACIVYVL+FKEPYY
Sbjct: 181 LQNWQSTPDMVDRLGGRNMELSDQATTALTLDIFIILFAIACIVYVLIFKEPYY 234

[Close]

BLAST of ClCG11G008560 vs. NCBI nr
Match: gi|449439697|ref|XP_004137622.1| (PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 423.3 bits (1087), Expect = 2.7e-115
Identity = 205/234 (87.61%), Postives = 219/234 (93.59%), Query Frame = 1


Query: 1   MASSPIPNSLLFHRTFHSPTRTFHTWRVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIG 60
           MAS P PNSLLFH+TFHS   TF TWRVYA+QAPNNDR+RPPPGVDTRIHWQNEEEGWIG
Sbjct: 1   MASPPFPNSLLFHKTFHSSAPTFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 61  GQKKETNDHNN-NNNILGPSLADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHP 120
            +KKE+ND NN +NN+LGPSLADLLNNSSDSHYQFLGV AEAE+EEIKSAYRRL+KEYHP
Sbjct: 61  RKKKESNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYRRLSKEYHP 120

Query: 121 DTTSLPLKAASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQE 180
           DTTSLPLK ASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLR+KLEDPYEQE
Sbjct: 121 DTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYEQE 180

Query: 181 LQNWKSTPDMVDRLAGRNMELSDQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           LQNW STPDMVDRL GRN+ELSDQ++ ALT+DI IILFAIACIVYVLLFKEPYY
Sbjct: 181 LQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEPYY 234

[Close]

BLAST of ClCG11G008560 vs. NCBI nr
Match: gi|590699286|ref|XP_007045885.1| (Chaperone DnaJ-domain superfamily protein [Theobroma cacao])

HSP 1 Score: 310.8 bits (795), Expect = 2.0e-81
Identity = 150/212 (70.75%), Postives = 175/212 (82.55%), Query Frame = 1


Query: 28  VYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQKKETNDHNN------NNNILGPSLA 87
           V ASQ P+  RQR PPGVDTRIHW NE+EGWIGG  K               N+LG   A
Sbjct: 89  VLASQGPSG-RQRAPPGVDTRIHWDNEDEGWIGGSSKSQQTEEKLGAEEQQKNLLGEKFA 148

Query: 88  DLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYE 147
           DLLN+SSDSHYQFLGV AEA+LEE+K+AYRRL+KEYHPDTTSLPLKAASEKFMKL++VY 
Sbjct: 149 DLLNDSSDSHYQFLGVSAEADLEEVKAAYRRLSKEYHPDTTSLPLKAASEKFMKLREVYN 208

Query: 148 VLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMELS 207
           VLS+EESR+FYDWTLAQE ASR+A+KLRI+LEDPY+Q+L+N+K  PDMVDRL GRNMELS
Sbjct: 209 VLSSEESRRFYDWTLAQEAASRKAEKLRIRLEDPYQQDLRNYKPKPDMVDRLGGRNMELS 268

Query: 208 DQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           DQ+  ALT D+ +I+FAI CI+YVL+FKEPYY
Sbjct: 269 DQAMTALTFDVFVIIFAICCIIYVLVFKEPYY 299

[Close]

BLAST of ClCG11G008560 vs. NCBI nr
Match: gi|976902566|gb|KVH90508.1| (DnaJ domain-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 308.1 bits (788), Expect = 1.3e-80
Identity = 142/213 (66.67%), Postives = 179/213 (84.04%), Query Frame = 1


Query: 27  RVYASQAPNNDRQRPPPGVDTRIHWQNEEEGWIGGQ------KKETNDHNNNNNILGPSL 86
           R+YA++    +RQR PPGVDTRIHW+NE+EGW+GG       +K   +    NN+LG   
Sbjct: 43  RIYAAEG-GGERQRAPPGVDTRIHWENEDEGWVGGSGSGNTTRKVEEEEEQTNNLLGEKF 102

Query: 87  ADLLNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVY 146
           ++LLNNS+DSHYQFLGV AEA+LEEIK+AYRRL+KEYHPDTTSLPLKAASE FMKL++VY
Sbjct: 103 SELLNNSTDSHYQFLGVPAEADLEEIKAAYRRLSKEYHPDTTSLPLKAASEMFMKLREVY 162

Query: 147 EVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMEL 206
           +VLSN E R+FYDWTLAQE ASR+A+K+R++LEDPY ++++NW+S PDMVDRL GRNMEL
Sbjct: 163 DVLSNSEKRRFYDWTLAQEAASREAEKMRVRLEDPYMKDIENWESVPDMVDRLGGRNMEL 222

Query: 207 SDQSTAALTVDILIILFAIACIVYVLLFKEPYY 234
           SDQ+ +ALT DI II+F+I CI+YV++FKEPYY
Sbjct: 223 SDQAKSALTFDIFIIIFSICCIIYVVVFKEPYY 254

[Close]

BLAST of ClCG11G008560 vs. NCBI nr
Match: gi|1012035862|ref|XP_015953139.1| (PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Arachis duranensis])

HSP 1 Score: 308.1 bits (788), Expect = 1.3e-80
Identity = 144/211 (68.25%), Postives = 182/211 (86.26%), Query Frame = 1


Query: 27  RVYASQAPNNDRQRPP-PGVDTRIHWQNEEEGWIGGQKKE--TNDHNNNNNILGPSLADL 86
           +V AS+ P N R+ PP PGVDTRIHWQNE EGW+GG  K+  T D+ N  N+LG S ADL
Sbjct: 42  QVRASKGPGNKRRAPPSPGVDTRIHWQNENEGWVGGSNKQQSTADNKNPKNLLGESFADL 101

Query: 87  LNNSSDSHYQFLGVGAEAELEEIKSAYRRLTKEYHPDTTSLPLKAASEKFMKLKQVYEVL 146
           L+ SS SHY+FLGV A+A+LEEIK+AYRRL+KEYHPDTTSLPLK+ASEKFMKL+++Y+VL
Sbjct: 102 LSASSGSHYEFLGVSADADLEEIKTAYRRLSKEYHPDTTSLPLKSASEKFMKLREIYDVL 161

Query: 147 SNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQNWKSTPDMVDRLAGRNMELSDQ 206
           S+EESR FYDWTLAQE ASRQA+K++++LEDPYEQ+L++++S PDMVDRL G+NM+LSDQ
Sbjct: 162 SDEESRTFYDWTLAQEAASRQAEKIKMRLEDPYEQQLRSYESVPDMVDRLGGKNMKLSDQ 221

Query: 207 STAALTVDILIILFAIACIVYVLLFKEPYYY 235
           + +ALT+D+ II+FAI CI+YV +FK PYYY
Sbjct: 222 AVSALTIDVFIIVFAICCIIYVTIFKAPYYY 252

The following BLAST results are available for this feature:

BLAST of ClCG11G008560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NDHT_ARATH	1.4e-74	64.11	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana ...	[more]
DNAJ_HYDTT	5.7e-12	42.27	Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12...	[more]
DNAJ_GEOKA	1.1e-10	50.79	Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) GN=dnaJ PE=3 ...	[more]
DNAJ_GEOSE	1.4e-10	50.79	Chaperone protein DnaJ OS=Geobacillus stearothermophilus GN=dnaJ PE=3 SV=1	[more]
DNAJ_GEOSW	1.8e-10	50.79	Chaperone protein DnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ PE=3 SV=1	[more]

BLAST of ClCG11G008560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT25_CUCSA	1.9e-115	87.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042670 PE=4 SV=1	[more]
A0A0F7H024_9ROSI	6.2e-82	66.67	Chaperone DnaJ-domain superfamily protein (Fragment) OS=Melianthus villosus GN=N...	[more]
A0A061EBG7_THECC	1.4e-81	70.75	Chaperone DnaJ-domain superfamily protein OS=Theobroma cacao GN=TCM_011554 PE=4 ...	[more]
A0A103XGU1_CYNCS	8.9e-81	66.67	DnaJ domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_00753...	[more]
W9RNY0_9ROSA	4.4e-80	63.56	Chaperone protein DnaJ OS=Morus notabilis GN=L484_025453 PE=4 SV=1	[more]

BLAST of ClCG11G008560 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G09350.1	7.7e-76	64.11	Chaperone DnaJ-domain superfamily protein	[more]
AT1G80030.1	3.9e-11	47.76	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT3G17830.1	8.7e-11	49.21	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT2G22360.1	4.3e-10	47.62	DNAJ heat shock family protein	[more]
AT5G18140.1	4.3e-10	30.50	Chaperone DnaJ-domain superfamily protein	[more]

BLAST of ClCG11G008560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659066817\|ref\|XP_008462782.1\|	3.1e-119	89.74	PREDICTED: dnaJ homolog subfamily B member 12 [Cucumis melo]	[more]
gi\|449439697\|ref\|XP_004137622.1\|	2.7e-115	87.61	PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic isoform X1 [C...	[more]
gi\|590699286\|ref\|XP_007045885.1\|	2.0e-81	70.75	Chaperone DnaJ-domain superfamily protein [Theobroma cacao]	[more]
gi\|976902566\|gb\|KVH90508.1\|	1.3e-80	66.67	DnaJ domain-containing protein [Cynara cardunculus var. scolymus]	[more]
gi\|1012035862\|ref\|XP_015953139.1\|	1.3e-80	68.25	PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Arachis dura...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001623	DnaJ_domain
IPR018253	DnaJ_domain_CS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G008560.1	ClCG11G008560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 110..125 score: 1.2E-13coord: 92..110 score: 1.2E-13coord: 128..148 score: 1.2
IPR001623	DnaJ domain	GENE3D	G3DSA:1.10.287.110		coord: 87..153 score: 2.9
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 91..153 score: 1.7
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 89..148 score: 7.2
IPR001623	DnaJ domain	PROFILE	PS50076	DNAJ_2	coord: 90..156 score: 17
IPR001623	DnaJ domain	unknown	SSF46565	Chaperone J-domain	coord: 85..156 score: 5.89
IPR018253	DnaJ domain, conserved site	PROSITE	PS00636	DNAJ_1	coord: 133..152 scor
None	No IPR available	unknown	Coil	Coil	coord: 126..146 score: -coord: 96..116 scor
None	No IPR available	PANTHER	PTHR24078	DNAJ HOMOLOG SUBFAMILY C MEMBER	coord: 74..153 score: 3.4
None	No IPR available	PANTHER	PTHR24078:SF233	DNAJ HOMOLOG SUBFAMILY C MEMBER 11	coord: 74..153 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG11G008560	Cla011953	Watermelon (97103) v1	wcgwmB104
ClCG11G008560	Cla97C11G215020	Watermelon (97103) v2	wcgwmbB067
ClCG11G008560	Lsi11G010000	Bottle gourd (USVL1VR-Ls)	lsiwcgB079
ClCG11G008560	Cp4.1LG01g26170	Cucurbita pepo (Zucchini)	cpewcgB356

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG11G008560	Cucurbita moschata (Rifu)	cmowcgB238
ClCG11G008560	Wild cucumber (PI 183967)	cpiwcgB103
ClCG11G008560	Wild cucumber (PI 183967)	cpiwcgB112
ClCG11G008560	Cucumber (Chinese Long) v2	cuwcgB097
ClCG11G008560	Melon (DHL92) v3.5.1	mewcgB269
ClCG11G008560	Cucurbita pepo (Zucchini)	cpewcgB160
ClCG11G008560	Cucurbita pepo (Zucchini)	cpewcgB162
ClCG11G008560	Cucurbita pepo (Zucchini)	cpewcgB367
ClCG11G008560	Cucumber (Gy14) v2	cgybwcgB095
ClCG11G008560	Cucumber (Gy14) v2	cgybwcgB104
ClCG11G008560	Melon (DHL92) v3.6.1	medwcgB260
ClCG11G008560	Silver-seed gourd	carwcgB0303
ClCG11G008560	Cucumber (Chinese Long) v3	cucwcgB113
ClCG11G008560	Wax gourd	wcgwgoB159
ClCG11G008560	Cucumber (Gy14) v1	cgywcgB097
ClCG11G008560	Cucurbita maxima (Rimu)	cmawcgB250