Cp4.1LG01g26170 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g26170
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionChaperone protein DnaJ
LocationCp4.1LG01 : 21311562 .. 21312388 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATGGCCTCTCCTTCTATTCCCAATTCTCTCTTCTTGAACAGAACCTTCCACTCGCCTGCTCGCACATTCCGTACATGGCCGGTCTACGCATCCCAACCTCCCAACAACCGCCAAAGGCCTCCACCGGGCGTCGACACAAGAATTCATTGGCAAAATGATGAAGAAGGTTGGATTGGAGGCCCTAGGCCTTCCCAATCCCGGCGAGACCAGAAGGAGCAGAATAATAATAATAATAATAACGCGTTGGGTCCAAGTTTGGCCGATTTGCTCAATAACTCATCCGACTCTCACTACCAGTACGTGAGCTTGGCTAGCTGGCTGCATATGCTTCGTTAATTTCGTTTTGAATTTGATTGATGTTGGTATCATGGTTTGTTCTGTGTATATATGCGCGCAGGTTCTTAGGAGTCGGTGCTGAGGCTGACCTAGAAGAGATAAAAAGTGCGTATCGGAGATTGTCAAAGGAATATCATCCCGACACCACCTCTCTCCCTCTAAAAGCTGCGTCCGACAAATTTATGAAATTAAAACAAGTGTACGAGGTCCTCAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGATAAGCTGAGGATCAAGTTGGAAGATCCTTACGAGCAGGAGCTGCAAAGCTGGAAATCCACTCCAGATATGGTCGATCGCCTTGCTGGAAGGAACATGGACTTGAGTGATCAGGCCACCACAGCTCTTACCTTGGATATCCTTATCATTCTCTTTGCTATAGGCTGCATTGTGTATGTCCTCCTCTTTAAGGAACCATATTATTGA

mRNA sequence

ATGGCCATGGCCTCTCCTTCTATTCCCAATTCTCTCTTCTTGAACAGAACCTTCCACTCGCCTGCTCGCACATTCCGTACATGGCCGGTCTACGCATCCCAACCTCCCAACAACCGCCAAAGGCCTCCACCGGGCGTCGACACAAGAATTCATTGGCAAAATGATGAAGAAGGTTGGATTGGAGGCCCTAGGCCTTCCCAATCCCGGCGAGACCAGAAGGAGCAGAATAATAATAATAATAATAACGCGTTGGGTCCAAGTTTGGCCGATTTGCTCAATAACTCATCCGACTCTCACTACCAGTTCTTAGGAGTCGGTGCTGAGGCTGACCTAGAAGAGATAAAAAGTGCGTATCGGAGATTGTCAAAGGAATATCATCCCGACACCACCTCTCTCCCTCTAAAAGCTGCGTCCGACAAATTTATGAAATTAAAACAAGTGTACGAGGTCCTCAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGATAAGCTGAGGATCAAGTTGGAAGATCCTTACGAGCAGGAGCTGCAAAGCTGGAAATCCACTCCAGATATGGTCGATCGCCTTGCTGGAAGGAACATGGACTTGAGTGATCAGGCCACCACAGCTCTTACCTTGGATATCCTTATCATTCTCTTTGCTATAGGCTGCATTGTGTATGTCCTCCTCTTTAAGGAACCATATTATTGA

Coding sequence (CDS)

ATGGCCATGGCCTCTCCTTCTATTCCCAATTCTCTCTTCTTGAACAGAACCTTCCACTCGCCTGCTCGCACATTCCGTACATGGCCGGTCTACGCATCCCAACCTCCCAACAACCGCCAAAGGCCTCCACCGGGCGTCGACACAAGAATTCATTGGCAAAATGATGAAGAAGGTTGGATTGGAGGCCCTAGGCCTTCCCAATCCCGGCGAGACCAGAAGGAGCAGAATAATAATAATAATAATAACGCGTTGGGTCCAAGTTTGGCCGATTTGCTCAATAACTCATCCGACTCTCACTACCAGTTCTTAGGAGTCGGTGCTGAGGCTGACCTAGAAGAGATAAAAAGTGCGTATCGGAGATTGTCAAAGGAATATCATCCCGACACCACCTCTCTCCCTCTAAAAGCTGCGTCCGACAAATTTATGAAATTAAAACAAGTGTACGAGGTCCTCAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGATAAGCTGAGGATCAAGTTGGAAGATCCTTACGAGCAGGAGCTGCAAAGCTGGAAATCCACTCCAGATATGGTCGATCGCCTTGCTGGAAGGAACATGGACTTGAGTGATCAGGCCACCACAGCTCTTACCTTGGATATCCTTATCATTCTCTTTGCTATAGGCTGCATTGTGTATGTCCTCCTCTTTAAGGAACCATATTATTGA

Protein sequence

MAMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGGPRPSQSRRDQKEQNNNNNNNALGPSLADLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQSWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY
Homology
[Close]
BLAST of Cp4.1LG01g26170 vs. Swiss-Prot
Match: NDHT_ARATH (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana GN=ndhT PE=1 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.1e-70
Identity = 138/217 (63.59%), Postives = 170/217 (78.34%), Query Frame = 1 

Query: 26  RTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGGPRPSQSRRDQKEQNNNNNNNALG 85
           R   +YASQ P    +P PGVDTRIHW++ +EGWIGG      R D  +  + +  N L 
Sbjct: 39  RVTRIYASQGPTKPSKPSPGVDTRIHWESPDEGWIGG------RSDPAKSVDEDKTNLLS 98

Query: 86  PS-LADLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKL 145
               A+L+ +S DSHYQFLGV  +ADLEEIKSAYRRLSKEYHPDTTSLPLK AS+KFMKL
Sbjct: 99  DEKFAELIKDSFDSHYQFLGVSTDADLEEIKSAYRRLSKEYHPDTTSLPLKTASEKFMKL 158

Query: 146 KQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQSWKSTPDMVDRLAGR 205
           ++VY VLS+EE+R+FYDWTLAQE ASRQA+K+R+KLEDP EQ+ + ++S PDMVDRL GR
Sbjct: 159 REVYNVLSDEETRRFYDWTLAQEVASRQAEKMRMKLEDPKEQDFRGYESIPDMVDRLGGR 218

Query: 206 NMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 242
           NM+LSDQA TALT DILI+LFA+ CI +V++FK+P Y
Sbjct: 219 NMELSDQAMTALTFDILIVLFAVCCIAFVIVFKDPSY 249

[Close]
BLAST of Cp4.1LG01g26170 vs. Swiss-Prot
Match: DNAJ_HYDTT (Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 1 

Query: 99  HYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRK 158
           +YQ LGV  +A  EEIK AYRRL+KEYHPD ++   + AS+KF ++ + Y +LS+EE RK
Sbjct: 6   YYQILGVSKDATAEEIKKAYRRLAKEYHPDISA--DENASEKFKEINEAYHILSDEERRK 65

Query: 159 FYDWTLAQEEASRQADKLRIKLEDPYEQELQSWKSTP 196
            YD  L   +     D +   ++D  E   Q  + +P
Sbjct: 66  EYDRILKSGDEKSYRDFMEY-IQDFLESIWQGMRRSP 99

[Close]
BLAST of Cp4.1LG01g26170 vs. Swiss-Prot
Match: DNAJ_SYNP6 (Chaperone protein DnaJ OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-10
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 1 

Query: 99  HYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRK 158
           +YQ LGV  +AD +EIK AYRRL+++YHPD    P   A DKF ++ + YEVLS  E+R 
Sbjct: 5   YYQLLGVARDADKDEIKRAYRRLARKYHPDVNKEP--GAEDKFKEINRAYEVLSEPETRA 64

Query: 159 FYD 162
            YD
Sbjct: 65  RYD 65

[Close]
BLAST of Cp4.1LG01g26170 vs. Swiss-Prot
Match: DNAJ_GEOKA (Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.4e-10
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 1 

Query: 99  HYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRK 158
           +Y+ LGV   A  +EIK AYR+LSK+YHPD    P   A++KF ++K+ YEVLS++E R 
Sbjct: 6   YYEILGVSKNATKDEIKKAYRKLSKQYHPDVNKAP--DAAEKFKEIKEAYEVLSDDEKRA 65

Query: 159 FYD 162
            YD
Sbjct: 66  RYD 66

[Close]
BLAST of Cp4.1LG01g26170 vs. Swiss-Prot
Match: DNAJ_GEOSE (Chaperone protein DnaJ OS=Geobacillus stearothermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.2e-10
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 1 

Query: 99  HYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRK 158
           +Y+ LGV   A  EEIK AYR+LSK+YHPD    P   A++KF ++K+ YEVLS+++ R 
Sbjct: 6   YYEILGVSKNATKEEIKKAYRKLSKKYHPDVNKEP--DAAEKFKEIKEAYEVLSDDQKRA 65

Query: 159 FYD 162
            YD
Sbjct: 66  HYD 66

[Close]
BLAST of Cp4.1LG01g26170 vs. TrEMBL
Match: A0A0A0LT25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042670 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 3.2e-102
Identity = 198/242 (81.82%), Postives = 213/242 (88.02%), Query Frame = 1 

Query: 3   MASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNN-RQRPPPGVDTRIHWQNDEEGWIG 62
           MASP  PNSL  ++TFHS A TFRTW VYA+Q PNN R+RPPPGVDTRIHWQN+EEGWIG
Sbjct: 1   MASPPFPNSLLFHKTFHSSAPTFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 63  GPRPSQSRRDQKEQNNNNN--NNALGPSLADLLNNSSDSHYQFLGVGAEADLEEIKSAYR 122
                   R +KE N+ NN  NN LGPSLADLLNNSSDSHYQFLGV AEA++EEIKSAYR
Sbjct: 61  --------RKKKESNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYR 120

Query: 123 RLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIK 182
           RLSKEYHPDTTSLPLK AS+KFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLR+K
Sbjct: 121 RLSKEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMK 180

Query: 183 LEDPYEQELQSWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEP 242
           LEDPYEQELQ+W STPDMVDRL GRN++LSDQA+TALTLDI IILFAI CIVYVLLFKEP
Sbjct: 181 LEDPYEQELQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEP 234

[Close]
BLAST of Cp4.1LG01g26170 vs. TrEMBL
Match: A0A061EBG7_THECC (Chaperone DnaJ-domain superfamily protein OS=Theobroma cacao GN=TCM_011554 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 8.6e-79
Identity = 157/224 (70.09%), Postives = 185/224 (82.59%), Query Frame = 1 

Query: 22  ARTFRT----WPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGGPRPSQSRRDQKEQNN 81
           ART RT      V ASQ P+ RQR PPGVDTRIHW N++EGWIGG   SQ + ++K    
Sbjct: 77  ARTRRTNCGSLGVLASQGPSGRQRAPPGVDTRIHWDNEDEGWIGGSSKSQ-QTEEKLGAE 136

Query: 82  NNNNNALGPSLADLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAA 141
               N LG   ADLLN+SSDSHYQFLGV AEADLEE+K+AYRRLSKEYHPDTTSLPLKAA
Sbjct: 137 EQQKNLLGEKFADLLNDSSDSHYQFLGVSAEADLEEVKAAYRRLSKEYHPDTTSLPLKAA 196

Query: 142 SDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQSWKSTPDM 201
           S+KFMKL++VY VLS+EESR+FYDWTLAQE ASR+A+KLRI+LEDPY+Q+L+++K  PDM
Sbjct: 197 SEKFMKLREVYNVLSSEESRRFYDWTLAQEAASRKAEKLRIRLEDPYQQDLRNYKPKPDM 256

Query: 202 VDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 242
           VDRL GRNM+LSDQA TALT D+ +I+FAI CI+YVL+FKEPYY
Sbjct: 257 VDRLGGRNMELSDQAMTALTFDVFVIIFAICCIIYVLVFKEPYY 299

[Close]
BLAST of Cp4.1LG01g26170 vs. TrEMBL
Match: A0A0F7H024_9ROSI (Chaperone DnaJ-domain superfamily protein (Fragment) OS=Melianthus villosus GN=NDHT PE=2 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.2e-77
Identity = 151/221 (68.33%), Postives = 186/221 (84.16%), Query Frame = 1 

Query: 23  RTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGG--PRPSQSRRDQKEQNNNNN 82
           R +R     +S+ P  RQR PPGVDTRIHW+N++EGWIGG   + SQS+ + +E+  N  
Sbjct: 15  RVYRLRIFASSEQPYKRQRAPPGVDTRIHWENEDEGWIGGNSSQTSQSKLNAEEEEKN-- 74

Query: 83  NNALGPSLADLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDK 142
              LG   A+LLN+SSDSHYQFLGV A+ADLEEIK+AYR+LSKEYHPDTTSLPLKAASDK
Sbjct: 75  --LLGEKFAELLNDSSDSHYQFLGVEAQADLEEIKTAYRKLSKEYHPDTTSLPLKAASDK 134

Query: 143 FMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQSWKSTPDMVDR 202
           FMKL+++Y+VLSN+ESR+FYDWTLAQE ASRQA+K+R+KLEDPY+QEL  ++S PD+VDR
Sbjct: 135 FMKLREIYDVLSNDESRRFYDWTLAQEAASRQAEKMRMKLEDPYQQELDKYESVPDLVDR 194

Query: 203 LAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 242
           L G+N+ LSDQA+TALT+DI II+FAI CIVYVL+FKEPYY
Sbjct: 195 LGGKNLKLSDQASTALTIDIAIIIFAICCIVYVLIFKEPYY 231

[Close]
BLAST of Cp4.1LG01g26170 vs. TrEMBL
Match: A0A059DAD9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00085 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.4e-76
Identity = 150/213 (70.42%), Postives = 177/213 (83.10%), Query Frame = 1 

Query: 30  VYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGGPRPSQSRRDQKEQN-NNNNNNALGPSL 89
           V A+Q P  R RPPPGVDTRIHW+N++EGWIGG   S+S    K+        N LG   
Sbjct: 51  VSATQGPQER-RPPPGVDTRIHWENEDEGWIGGGDGSRSEEGGKQLGAEEEQRNLLGEKF 110

Query: 90  ADLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVY 149
           ADLLN S+DSHYQFLG+ A ADLEEIK+AYRRLSKEYHPDTTSLPLK ASDKF+KL++VY
Sbjct: 111 ADLLNESADSHYQFLGISANADLEEIKAAYRRLSKEYHPDTTSLPLKTASDKFLKLREVY 170

Query: 150 EVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQSWKSTPDMVDRLAGRNMDL 209
           +VLS+EESR+FYDWTLAQE ASRQA+K+R++LEDPYEQELQ++K  PDMVDRL+GRNMDL
Sbjct: 171 DVLSDEESRRFYDWTLAQEAASRQAEKMRMRLEDPYEQELQNYKPVPDMVDRLSGRNMDL 230

Query: 210 SDQATTALTLDILIILFAIGCIVYVLLFKEPYY 242
           SDQA +ALT D+ II+FAI CI+YV+ FKEPYY
Sbjct: 231 SDQAMSALTFDVFIIIFAICCIIYVIYFKEPYY 262

[Close]
BLAST of Cp4.1LG01g26170 vs. TrEMBL
Match: W9RNY0_9ROSA (Chaperone protein DnaJ OS=Morus notabilis GN=L484_025453 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.2e-76
Identity = 147/224 (65.62%), Postives = 179/224 (79.91%), Query Frame = 1 

Query: 26  RTWPV--------YASQPPNNRQRPPPGVDTRIHWQNDEEGWIGGPRPSQSRRDQKEQNN 85
           RTW V         + + P  R+R PPGVDTRIHW N++EGW+GG   S S      Q +
Sbjct: 31  RTWHVNVRFLVRAVSGEGPRKRERSPPGVDTRIHWDNEDEGWVGGS--SSSSTSTSGQAH 90

Query: 86  NNNNNALGPSLADLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAA 145
           ++  N LG   ADLLN S+DSHYQFLGV  EADLEEIK+AYRRLSKEYHPDTTSLPLKAA
Sbjct: 91  DDQKNLLGEKFADLLNQSADSHYQFLGVSVEADLEEIKAAYRRLSKEYHPDTTSLPLKAA 150

Query: 146 SDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQSWKSTPDM 205
           SDKF++L++VY+VLSNEESR+FYDWTLAQE ASRQA+K+R+KLEDPYEQ+L++++  P++
Sbjct: 151 SDKFLRLREVYDVLSNEESRRFYDWTLAQEAASRQAEKMRVKLEDPYEQDLRNYEPVPEV 210

Query: 206 VDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 242
           VDRL GRNMDLSDQA TALT D+ I++FAI CI+YV+ FKEPYY
Sbjct: 211 VDRLGGRNMDLSDQAMTALTFDVFIVVFAICCIIYVIFFKEPYY 252

[Close]
BLAST of Cp4.1LG01g26170 vs. TAIR10
Match: AT4G09350.1 (AT4G09350.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 266.9 bits (681), Expect = 1.2e-71
Identity = 138/217 (63.59%), Postives = 170/217 (78.34%), Query Frame = 1 

Query: 26  RTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGGPRPSQSRRDQKEQNNNNNNNALG 85
           R   +YASQ P    +P PGVDTRIHW++ +EGWIGG      R D  +  + +  N L 
Sbjct: 39  RVTRIYASQGPTKPSKPSPGVDTRIHWESPDEGWIGG------RSDPAKSVDEDKTNLLS 98

Query: 86  PS-LADLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKL 145
               A+L+ +S DSHYQFLGV  +ADLEEIKSAYRRLSKEYHPDTTSLPLK AS+KFMKL
Sbjct: 99  DEKFAELIKDSFDSHYQFLGVSTDADLEEIKSAYRRLSKEYHPDTTSLPLKTASEKFMKL 158

Query: 146 KQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQSWKSTPDMVDRLAGR 205
           ++VY VLS+EE+R+FYDWTLAQE ASRQA+K+R+KLEDP EQ+ + ++S PDMVDRL GR
Sbjct: 159 REVYNVLSDEETRRFYDWTLAQEVASRQAEKMRMKLEDPKEQDFRGYESIPDMVDRLGGR 218

Query: 206 NMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 242
           NM+LSDQA TALT DILI+LFA+ CI +V++FK+P Y
Sbjct: 219 NMELSDQAMTALTFDILIVLFAVCCIAFVIVFKDPSY 249

[Close]
BLAST of Cp4.1LG01g26170 vs. TAIR10
Match: AT3G17830.1 (AT3G17830.1 Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 65.5 bits (158), Expect = 5.2e-11
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 1 

Query: 99  HYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRK 158
           HY  L V   A L+EIKS+YR+L+++YHPD    P   A DKF ++   YEVLS+EE R 
Sbjct: 64  HYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNP--GAEDKFKQISAAYEVLSDEEKRS 123

Query: 159 FYD 162
            YD
Sbjct: 124 AYD 124

[Close]
BLAST of Cp4.1LG01g26170 vs. TAIR10
Match: AT1G80030.1 (AT1G80030.1 Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-10
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 1 

Query: 95  SSDSHYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNE 154
           +S  +Y  LGV   A+ +EIK+AYRRL+++YHPD    P   A++KF ++   YEVLS+E
Sbjct: 72  TSGDYYATLGVSKSANNKEIKAAYRRLARQYHPDVNKEP--GATEKFKEISAAYEVLSDE 131

Query: 155 ESRKFYD 162
           + R  YD
Sbjct: 132 QKRALYD 136

[Close]
BLAST of Cp4.1LG01g26170 vs. TAIR10
Match: AT2G22360.1 (AT2G22360.1 DNAJ heat shock family protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-09
Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 1 

Query: 99  HYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRK 158
           +Y  LGV   A   EIKSAYR+L++ YHPD    P   A +KF ++   YEVLS++E + 
Sbjct: 87  YYSVLGVSKNATKAEIKSAYRKLARNYHPDVNKDP--GAEEKFKEISNAYEVLSDDEKKS 146

Query: 159 FYD 162
            YD
Sbjct: 147 LYD 147

[Close]
BLAST of Cp4.1LG01g26170 vs. TAIR10
Match: AT4G39960.1 (AT4G39960.1 Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 58.9 bits (141), Expect = 4.9e-09
Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 1 

Query: 100 YQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKF 159
           Y  LGV   A   EIKSAYR+L++ YHPD        A DKF ++   YE+LS++E R  
Sbjct: 87  YSVLGVSKNATKAEIKSAYRKLARSYHPDVNK--DAGAEDKFKEISNAYEILSDDEKRSL 146

Query: 160 YD 162
           YD
Sbjct: 147 YD 146

[Close]
BLAST of Cp4.1LG01g26170 vs. NCBI nr
Match: gi|659066817|ref|XP_008462782.1| (PREDICTED: dnaJ homolog subfamily B member 12 [Cucumis melo])

HSP 1 Score: 386.0 bits (990), Expect = 5.0e-104
Identity = 197/240 (82.08%), Postives = 213/240 (88.75%), Query Frame = 1 

Query: 3   MASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNN-RQRPPPGVDTRIHWQNDEEGWIG 62
           MAS   PNSL  ++TFHSPA  FRTW VYA+Q PNN R+RPPPGVDTRIHWQN+EEGWIG
Sbjct: 1   MASSPFPNSLLFHKTFHSPAPAFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 63  GPRPSQSRRDQKEQNNNNNNNALGPSLADLLNNSSDSHYQFLGVGAEADLEEIKSAYRRL 122
           G      ++ +    NN +NN LGPSLADLLNNSSDSHYQFLGVGAEA++EEIKSAYRRL
Sbjct: 61  G------KKKESNDQNNESNNMLGPSLADLLNNSSDSHYQFLGVGAEAEVEEIKSAYRRL 120

Query: 123 SKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLE 182
           SKEYHPDTTSLPLK AS+KFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLE
Sbjct: 121 SKEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLE 180

Query: 183 DPYEQELQSWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 242
           DPYEQELQ+W+STPDMVDRL GRNM+LSDQATTALTLDI IILFAI CIVYVL+FKEPYY
Sbjct: 181 DPYEQELQNWQSTPDMVDRLGGRNMELSDQATTALTLDIFIILFAIACIVYVLIFKEPYY 234

[Close]
BLAST of Cp4.1LG01g26170 vs. NCBI nr
Match: gi|449439697|ref|XP_004137622.1| (PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 379.4 bits (973), Expect = 4.6e-102
Identity = 198/242 (81.82%), Postives = 213/242 (88.02%), Query Frame = 1 

Query: 3   MASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNN-RQRPPPGVDTRIHWQNDEEGWIG 62
           MASP  PNSL  ++TFHS A TFRTW VYA+Q PNN R+RPPPGVDTRIHWQN+EEGWIG
Sbjct: 1   MASPPFPNSLLFHKTFHSSAPTFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 63  GPRPSQSRRDQKEQNNNNN--NNALGPSLADLLNNSSDSHYQFLGVGAEADLEEIKSAYR 122
                   R +KE N+ NN  NN LGPSLADLLNNSSDSHYQFLGV AEA++EEIKSAYR
Sbjct: 61  --------RKKKESNDQNNVSNNMLGPSLADLLNNSSDSHYQFLGVDAEAEVEEIKSAYR 120

Query: 123 RLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIK 182
           RLSKEYHPDTTSLPLK AS+KFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLR+K
Sbjct: 121 RLSKEYHPDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRMK 180

Query: 183 LEDPYEQELQSWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEP 242
           LEDPYEQELQ+W STPDMVDRL GRN++LSDQA+TALTLDI IILFAI CIVYVLLFKEP
Sbjct: 181 LEDPYEQELQNWVSTPDMVDRLGGRNLELSDQASTALTLDIFIILFAIACIVYVLLFKEP 234

[Close]
BLAST of Cp4.1LG01g26170 vs. NCBI nr
Match: gi|720093395|ref|XP_010246036.1| (PREDICTED: uncharacterized protein LOC104589413 [Nelumbo nucifera])

HSP 1 Score: 301.6 bits (771), Expect = 1.2e-78
Identity = 157/246 (63.82%), Postives = 192/246 (78.05%), Query Frame = 1 

Query: 3   MASPSIPNSLFL--------NRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQN 62
           MAS + P +L L        NR+  +  R+ R   V+AS+ P+ R+R PPGVDTRIHW N
Sbjct: 1   MASTAAPPTLSLLFGSRKGGNRSEEAHGRSRRNCRVFASENPDRRKRAPPGVDTRIHWDN 60

Query: 63  DEEGWIGGPRPSQSRRDQKEQNNNNNNNALGPSLADLLNNSSDSHYQFLGVGAEADLEEI 122
            +EGWIGG   S S+  ++        N LG   +DLLN SSDSHYQFLGV  +AD+EEI
Sbjct: 61  PDEGWIGG-STSSSQASRRLNVEEEQRNLLGEKFSDLLNTSSDSHYQFLGVAVDADMEEI 120

Query: 123 KSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQAD 182
           K+AYRRLSKEYHPDTTSLP+KAASDKFMKLK+VY++LSNEESR+FYDWTLAQE ASR+A+
Sbjct: 121 KAAYRRLSKEYHPDTTSLPIKAASDKFMKLKEVYDILSNEESRRFYDWTLAQEAASRKAE 180

Query: 183 KLRIKLEDPYEQELQSWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVL 241
           K+++KLEDPY QE+++W+S PDMVDRL GRNMDLSDQA TALT+D+ II+FAI CI+YVL
Sbjct: 181 KMKMKLEDPYMQEVKNWESVPDMVDRLGGRNMDLSDQAMTALTIDVGIIIFAICCIIYVL 240

[Close]
BLAST of Cp4.1LG01g26170 vs. NCBI nr
Match: gi|590699286|ref|XP_007045885.1| (Chaperone DnaJ-domain superfamily protein [Theobroma cacao])

HSP 1 Score: 301.6 bits (771), Expect = 1.2e-78
Identity = 157/224 (70.09%), Postives = 185/224 (82.59%), Query Frame = 1 

Query: 22  ARTFRT----WPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGGPRPSQSRRDQKEQNN 81
           ART RT      V ASQ P+ RQR PPGVDTRIHW N++EGWIGG   SQ + ++K    
Sbjct: 77  ARTRRTNCGSLGVLASQGPSGRQRAPPGVDTRIHWDNEDEGWIGGSSKSQ-QTEEKLGAE 136

Query: 82  NNNNNALGPSLADLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAA 141
               N LG   ADLLN+SSDSHYQFLGV AEADLEE+K+AYRRLSKEYHPDTTSLPLKAA
Sbjct: 137 EQQKNLLGEKFADLLNDSSDSHYQFLGVSAEADLEEVKAAYRRLSKEYHPDTTSLPLKAA 196

Query: 142 SDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQSWKSTPDM 201
           S+KFMKL++VY VLS+EESR+FYDWTLAQE ASR+A+KLRI+LEDPY+Q+L+++K  PDM
Sbjct: 197 SEKFMKLREVYNVLSSEESRRFYDWTLAQEAASRKAEKLRIRLEDPYQQDLRNYKPKPDM 256

Query: 202 VDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 242
           VDRL GRNM+LSDQA TALT D+ +I+FAI CI+YVL+FKEPYY
Sbjct: 257 VDRLGGRNMELSDQAMTALTFDVFVIIFAICCIIYVLVFKEPYY 299

[Close]
BLAST of Cp4.1LG01g26170 vs. NCBI nr
Match: gi|702236724|ref|XP_010045171.1| (PREDICTED: dnaJ homolog subfamily B member 14-like [Eucalyptus grandis])

HSP 1 Score: 294.3 bits (752), Expect = 2.0e-76
Identity = 150/213 (70.42%), Postives = 177/213 (83.10%), Query Frame = 1 

Query: 30  VYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGGPRPSQSRRDQKEQN-NNNNNNALGPSL 89
           V A+Q P  R RPPPGVDTRIHW+N++EGWIGG   S+S    K+        N LG   
Sbjct: 51  VSATQGPQER-RPPPGVDTRIHWENEDEGWIGGGDGSRSEEGGKQLGAEEEQRNLLGEKF 110

Query: 90  ADLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVY 149
           ADLLN S+DSHYQFLG+ A ADLEEIK+AYRRLSKEYHPDTTSLPLK ASDKF+KL++VY
Sbjct: 111 ADLLNESADSHYQFLGISANADLEEIKAAYRRLSKEYHPDTTSLPLKTASDKFLKLREVY 170

Query: 150 EVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQSWKSTPDMVDRLAGRNMDL 209
           +VLS+EESR+FYDWTLAQE ASRQA+K+R++LEDPYEQELQ++K  PDMVDRL+GRNMDL
Sbjct: 171 DVLSDEESRRFYDWTLAQEAASRQAEKMRMRLEDPYEQELQNYKPVPDMVDRLSGRNMDL 230

Query: 210 SDQATTALTLDILIILFAIGCIVYVLLFKEPYY 242
           SDQA +ALT D+ II+FAI CI+YV+ FKEPYY
Sbjct: 231 SDQAMSALTFDVFIIIFAICCIIYVIYFKEPYY 262

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g26170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NDHT_ARATH2.1e-7063.59NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana ... [more]
DNAJ_HYDTT1.1e-1041.24Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12... [more]
DNAJ_SYNP61.9e-1052.38Chaperone protein DnaJ OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG... [more]
DNAJ_GEOKA2.4e-1050.79Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) GN=dnaJ PE=3 ... [more]
DNAJ_GEOSE3.2e-1050.79Chaperone protein DnaJ OS=Geobacillus stearothermophilus GN=dnaJ PE=3 SV=1[more]
BLAST of Cp4.1LG01g26170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT25_CUCSA3.2e-10281.82Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042670 PE=4 SV=1[more]
A0A061EBG7_THECC8.6e-7970.09Chaperone DnaJ-domain superfamily protein OS=Theobroma cacao GN=TCM_011554 PE=4 ... [more]
A0A0F7H024_9ROSI1.2e-7768.33Chaperone DnaJ-domain superfamily protein (Fragment) OS=Melianthus villosus GN=N... [more]
A0A059DAD9_EUCGR1.4e-7670.42Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00085 PE=4 SV=1[more]
W9RNY0_9ROSA5.2e-7665.63Chaperone protein DnaJ OS=Morus notabilis GN=L484_025453 PE=4 SV=1[more]
BLAST of Cp4.1LG01g26170 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G09350.11.2e-7163.59 Chaperone DnaJ-domain superfamily protein[more]
AT3G17830.15.2e-1150.79 Molecular chaperone Hsp40/DnaJ family protein[more]
AT1G80030.11.5e-1046.27 Molecular chaperone Hsp40/DnaJ family protein[more]
AT2G22360.11.7e-0946.03 DNAJ heat shock family protein[more]
AT4G39960.14.9e-0946.77 Molecular chaperone Hsp40/DnaJ family protein[more]
BLAST of Cp4.1LG01g26170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659066817|ref|XP_008462782.1|5.0e-10482.08PREDICTED: dnaJ homolog subfamily B member 12 [Cucumis melo][more]
gi|449439697|ref|XP_004137622.1|4.6e-10281.82PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic isoform X1 [C... [more]
gi|720093395|ref|XP_010246036.1|1.2e-7863.82PREDICTED: uncharacterized protein LOC104589413 [Nelumbo nucifera][more]
gi|590699286|ref|XP_007045885.1|1.2e-7870.09Chaperone DnaJ-domain superfamily protein [Theobroma cacao][more]
gi|702236724|ref|XP_010045171.1|2.0e-7670.42PREDICTED: dnaJ homolog subfamily B member 14-like [Eucalyptus grandis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0010181 FMN binding
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g26170.1Cp4.1LG01g26170.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g26170CmaCh04G030340Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g26170Cla011953Watermelon (97103) v1cpewmB454
Cp4.1LG01g26170ClCG11G008560Watermelon (Charleston Gray)cpewcgB356
Cp4.1LG01g26170Lsi11G010000Bottle gourd (USVL1VR-Ls)cpelsiB322
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g26170Wild cucumber (PI 183967)cpecpiB385
Cp4.1LG01g26170Cucumber (Chinese Long) v2cpecuB386
Cp4.1LG01g26170Watermelon (Charleston Gray)cpewcgB367
Cp4.1LG01g26170Melon (DHL92) v3.5.1cpemeB400
Cp4.1LG01g26170Cucumber (Gy14) v2cgybcpeB214
Cp4.1LG01g26170Melon (DHL92) v3.6.1cpemedB465
Cp4.1LG01g26170Silver-seed gourdcarcpeB0034
Cp4.1LG01g26170Cucumber (Chinese Long) v3cpecucB0482
Cp4.1LG01g26170Wax gourdcpewgoB0538
Cp4.1LG01g26170Cucurbita moschata (Rifu)cmocpeB673