Cla005809 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla005809
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Zinc-finger protein 1 (AHRD V1 ***- D7KX25_ARALL); contains Interpro domain(s) IPR007087 Zinc finger, C2H2-type
Location	Chr1 : 7107027 .. 7107767 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTTTAAATTTAAACCTTGCAAAAGATTCAGAGCCGAGCAGCAGTCAAGAAGCAAATCCTGATCGTTCCAACGCTGCCGCTACCACTTCGTCCTGTCCACCAAGCTCGAGCAAAGTAGTCGTTGCCGATACATTGCCCATTTCACTTGACTTGACACTTCAGTTTAACTCCAATGATATCGATTCAAAGGGCGAAGGCGAGATTCAAGGGGAAACAAGTAGTAACAAATCATCATCTTCAGCAATGCCAAGAGTTTTCTCATGCAATTACTGTCGACGCAAATTCTTTAGCTCACAGGCGCTTGGTGGGCATCAAAATGCACACAAAAGAGAAAGGACAATGGCTAAACGTGTCACTCGGATGGGAATGTTCTTTGACAGATATGGTAGCTTGGCTTCTCTGCCACTTCATGGCTCAGCTCTTAGATCCCTTGGCATTGAAGCTCATGGTGCTCTACACCAAACAGTTCTAGCTTCAGATCAGAGGCCTTATCCTGGTAGGAGTGTCGGAGCAAAGTTCGAGCAGAGCTCTTTTGGGTTCCCGACGTTCATCGACGACTACGATGACGATGTGGGGATGTTTTGGCCAGGAAGTTTCAGGCAGGTAGCTGCCAAAGTTGATAGCAGCTTAGGTCCTTTGAAAACCACAGTTCAAAATTCAAATCCAGAGTTTGGGAAAACAATGCCTCCACCAAGAACAGAAACATCATCACCTGATCTCACTTTGAGGCTTTAG

mRNA sequence

ATGGAAGCTTTAAATTTAAACCTTGCAAAAGATTCAGAGCCGAGCAGCAGTCAAGAAGCAAATCCTGATCGTTCCAACGCTGCCGCTACCACTTCGTCCTGTCCACCAAGCTCGAGCAAAGTAGTCGTTGCCGATACATTGCCCATTTCACTTGACTTGACACTTCAGTTTAACTCCAATGATATCGATTCAAAGGGCGAAGGCGAGATTCAAGGGGAAACAAGTAGTAACAAATCATCATCTTCAGCAATGCCAAGAGTTTTCTCATGCAATTACTGTCGACGCAAATTCTTTAGCTCACAGGCGCTTGGTGGGCATCAAAATGCACACAAAAGAGAAAGGACAATGGCTAAACGTGTCACTCGGATGGGAATGTTCTTTGACAGATATGGTAGCTTGGCTTCTCTGCCACTTCATGGCTCAGCTCTTAGATCCCTTGGCATTGAAGCTCATGGTGCTCTACACCAAACAGTTCTAGCTTCAGATCAGAGGCCTTATCCTGGTAGGAGTGTCGGAGCAAAGTTCGAGCAGAGCTCTTTTGGGTTCCCGACGTTCATCGACGACTACGATGACGATGTGGGGATGTTTTGGCCAGGAAGTTTCAGGCAGGTAGCTGCCAAAGTTGATAGCAGCTTAGGTCCTTTGAAAACCACAGTTCAAAATTCAAATCCAGAGTTTGGGAAAACAATGCCTCCACCAAGAACAGAAACATCATCACCTGATCTCACTTTGAGGCTTTAG

Coding sequence (CDS)

ATGGAAGCTTTAAATTTAAACCTTGCAAAAGATTCAGAGCCGAGCAGCAGTCAAGAAGCAAATCCTGATCGTTCCAACGCTGCCGCTACCACTTCGTCCTGTCCACCAAGCTCGAGCAAAGTAGTCGTTGCCGATACATTGCCCATTTCACTTGACTTGACACTTCAGTTTAACTCCAATGATATCGATTCAAAGGGCGAAGGCGAGATTCAAGGGGAAACAAGTAGTAACAAATCATCATCTTCAGCAATGCCAAGAGTTTTCTCATGCAATTACTGTCGACGCAAATTCTTTAGCTCACAGGCGCTTGGTGGGCATCAAAATGCACACAAAAGAGAAAGGACAATGGCTAAACGTGTCACTCGGATGGGAATGTTCTTTGACAGATATGGTAGCTTGGCTTCTCTGCCACTTCATGGCTCAGCTCTTAGATCCCTTGGCATTGAAGCTCATGGTGCTCTACACCAAACAGTTCTAGCTTCAGATCAGAGGCCTTATCCTGGTAGGAGTGTCGGAGCAAAGTTCGAGCAGAGCTCTTTTGGGTTCCCGACGTTCATCGACGACTACGATGACGATGTGGGGATGTTTTGGCCAGGAAGTTTCAGGCAGGTAGCTGCCAAAGTTGATAGCAGCTTAGGTCCTTTGAAAACCACAGTTCAAAATTCAAATCCAGAGTTTGGGAAAACAATGCCTCCACCAAGAACAGAAACATCATCACCTGATCTCACTTTGAGGCTTTAG

Protein sequence

MEALNLNLAKDSEPSSSQEANPDRSNAAATTSSCPPSSSKVVVADTLPISLDLTLQFNSNDIDSKGEGEIQGETSSNKSSSSAMPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDQRPYPGRSVGAKFEQSSFGFPTFIDDYDDDVGMFWPGSFRQVAAKVDSSLGPLKTTVQNSNPEFGKTMPPPRTETSSPDLTLRL

Homology

[Close]

BLAST of Cla005809 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 3.4e-31
Identity = 98/254 (38.58%), Postives = 132/254 (51.97%), Query Frame = 1


Query: 27  AAATTSSCPPSSSKVVVADTLPISLDLTLQFNSND---IDSKGEGEIQGETSSNKSSS-- 86
           ++ ++SS   S+   V  D  PISL+L+L FN+N+   +D +        +S+++SS+  
Sbjct: 12  SSGSSSSQVASNLSPVGEDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPE 71

Query: 87  -------SAMPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGM--FFDRYGS 146
                  S   RVFSCNYC+RKF+SSQALGGHQNAHKRERT+AKR  RMG+   F   GS
Sbjct: 72  QQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGS 131

Query: 147 ------------LASLPLHGS------ALRSLGIEAHGALHQTVLASDQRPYPGRSVGAK 206
                       L+ LPLHGS      + R+LGI AH + H   +         R++ A+
Sbjct: 132 SSNYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNI-AR 191

Query: 207 FEQSSFG--FPTFIDDYDDDVGMFWPGSFRQVAAKVDSSLGPLKTTVQNSNPEFGKTMPP 247
           F Q  FG   P +++  DD+  M WPGSFRQ    V    G     +     +F      
Sbjct: 192 FNQGYFGNCIPFYVE--DDEAEMLWPGSFRQATNAVAVEAG--NDNLGERKMDFLDVKQA 251

[Close]

BLAST of Cla005809 vs. Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26
Identity = 84/201 (41.79%), Postives = 101/201 (50.25%), Query Frame = 1


Query: 49  ISLDLTLQFNSNDIDSKGEGEIQGETSSNKSSSSAMPRVFSCNYCRRKFFSSQALGGHQN 108
           +SLDL L    ND           +T S K  ++  PRVFSCNYCRRKF+SSQALGGHQN
Sbjct: 33  VSLDLKLNDTFND-----------DTKSTKCEAN--PRVFSCNYCRRKFYSSQALGGHQN 92

Query: 109 AHKRERTMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAH-GALHQTVLASDQRPYP 168
           AHKRERTMAKR   MG  F  +        +     SLG++AH G LH T+     +P P
Sbjct: 93  AHKRERTMAKRAMHMGRMFGHHHR-----PYTYTSSSLGMQAHSGLLHHTL----SQPQP 152

Query: 169 GRSVGAKFEQSSFG--FPTFIDDYDDDVGMFWPGSFRQVAAKVDSSLGPLKTTVQNSNPE 228
              V     Q  FG   P F D  D     FWPGSFRQV  + ++ +  + +T    +  
Sbjct: 153 --LVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFRQVVEEAEAPVVVVASTESGLDLN 209

Query: 229 FGKTMPPPRTETSSPDLTLRL 247
                      +S PDLTLRL
Sbjct: 213 SVAANGGVDNNSSKPDLTLRL 209

[Close]

BLAST of Cla005809 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.8e-19
Identity = 78/214 (36.45%), Postives = 98/214 (45.79%), Query Frame = 1


Query: 60  NDIDSKGEGEIQGETSSNKSSSSAMPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKR 119
           N IDS            ++    A PRVFSCNYC+RKF+SSQALGGHQNAHKRERT+AKR
Sbjct: 40  NLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 99

Query: 120 VTRMGMFF---------------DRYGSLASLPLHGSA--LRSLGIEAHGALHQTVLASD 179
                M                  R+ S+ASLPLHGS     +LGI+AH  +H+      
Sbjct: 100 GQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGR 159

Query: 180 QRPYPGRSVGAKFEQSSFGFPTFIDDYDDDVGMFWPGSF----------RQVAAKVDSSL 239
           Q      S+   F+QS    PT        +G   P  F            VAAK++  +
Sbjct: 160 QT----TSLSHVFKQSIHQKPT--------IGKMLPEKFHLEVAGNNNSNMVAAKLE-RI 219

Query: 240 GPLKTTVQNSNPEFGKTMPPPRTETSSPDLTLRL 247
           G  K+  ++ N +F K            DLTL+L
Sbjct: 220 GHFKSNQEDHN-QFKKI-----------DLTLKL 228

[Close]

BLAST of Cla005809 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.8e-17
Identity = 46/85 (54.12%), Postives = 57/85 (67.06%), Query Frame = 1


Query: 77  NKSSSSAMPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGMFFDRYG---SL 136
           N+S++S   ++FSCNYC+R F+SSQALGGHQNAHKRERT+AKR  RM      +G     
Sbjct: 50  NESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGF 109

Query: 137 ASLPLHG--SALRSLGIEAHGALHQ 157
           + LP HG  +  RSLGI+AH   H+
Sbjct: 110 SPLPFHGQYNNHRSLGIQAHSISHK 134

[Close]

BLAST of Cla005809 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.4e-13
Identity = 39/71 (54.93%), Postives = 48/71 (67.61%), Query Frame = 1


Query: 49  ISLDLTLQFNSNDIDSKGEGEIQGETSSNKSSSSAMPRVFSCNYCRRKFFSSQALGGHQN 108
           ++L+L L+ +S    S         +S+N SS    PRVFSCNYC+RKF+SSQALGGHQN
Sbjct: 21  LNLELVLEPSSMSSSSS--------SSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQN 80

Query: 109 AHKRERTMAKR 120
           AHK ERT+AK+
Sbjct: 81  AHKLERTLAKK 83

[Close]

BLAST of Cla005809 vs. TrEMBL
Match: A0A0A0KPA2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G548160 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.2e-125
Identity = 230/249 (92.37%), Postives = 235/249 (94.38%), Query Frame = 1


Query: 1   MEALNLNL--AKDSEPSSSQEANPDRSNAAATTSSCPPSSSKVVVADTLPISLDLTLQFN 60
           MEALNLNL  AKDSEPSSSQ ANPD SN A TTSSCPPS SKVVV DT PISLDLTLQFN
Sbjct: 1   MEALNLNLEAAKDSEPSSSQAANPDHSNTATTTSSCPPSLSKVVVVDTSPISLDLTLQFN 60

Query: 61  SNDIDSKGEGEIQGETSSNKSSSSAMPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAK 120
           SNDIDSKG+GEI GET+SNKSSSS +PRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAK
Sbjct: 61  SNDIDSKGDGEINGETNSNKSSSSTVPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAK 120

Query: 121 RVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDQRPYPGRSVGAKFEQS 180
           RVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTV+ASDQRPYPGRSVGAKFEQS
Sbjct: 121 RVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVVASDQRPYPGRSVGAKFEQS 180

Query: 181 SFGFPTFIDDYDDDVGMFWPGSFRQVAAKVDSSLGPLKTTVQNSNPEFGKTMPPPRTET- 240
           SFGFPTFI+DYDDDVGMFWPGSFRQVAAKVDS LGPLKTTVQNSNPEFGKTMPPPRTE  
Sbjct: 181 SFGFPTFIEDYDDDVGMFWPGSFRQVAAKVDSGLGPLKTTVQNSNPEFGKTMPPPRTEAG 240

Query: 241 SSPDLTLRL 247
           SSPDLTLRL
Sbjct: 241 SSPDLTLRL 249

[Close]

BLAST of Cla005809 vs. TrEMBL
Match: V4UB17_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016402mg PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.5e-62
Identity = 140/248 (56.45%), Postives = 168/248 (67.74%), Query Frame = 1


Query: 5   NLNLAKDSEPSSSQEANPDRSNAAA-----TTSSCPPSSSKVVVADTLPISLDLTLQFNS 64
           NL L  DSE SS   +N     A+      T SSC  +  K+   D  P+SLDLTL F S
Sbjct: 7   NLELENDSEVSSHVASNISAKEASPGPSKDTNSSCLTNVIKLN-PDPGPLSLDLTLHFKS 66

Query: 65  NDIDS-KGEGEIQGETSSNKSSSSAMPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAK 124
           NDID  KG GE  GE ++ ++ ++ +PRVFSCNYCRRKF+SSQALGGHQNAHKRERTMAK
Sbjct: 67  NDIDRLKGTGETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK 126

Query: 125 RVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDQRPYPGRSVGAKFEQS 184
           R  RMG+F DRY SLASLPLHGSA RSLGI+AH A+HQ V+   QRP P    GA+FEQ 
Sbjct: 127 RAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVV-PPQRP-PDMRGGARFEQG 186

Query: 185 SFGFPTFIDDYDDDVGMFWPGSFRQVAAKVDSSLGPLKTTVQNSNPEFGKTMPPPRTETS 244
            F  P F++  DDD+ +FWPGSFRQV+  V  +  P     Q SN  F    PPPRT++S
Sbjct: 187 YFAMPMFME--DDDIDLFWPGSFRQVSEAVRGN--PTLDFAQGSNGNFAAMPPPPRTDSS 246

Query: 245 SPDLTLRL 247
           +PDLTL+L
Sbjct: 247 APDLTLKL 247

[Close]

BLAST of Cla005809 vs. TrEMBL
Match: A0A067F403_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047746mg PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.5e-62
Identity = 140/248 (56.45%), Postives = 168/248 (67.74%), Query Frame = 1


Query: 5   NLNLAKDSEPSSSQEANPDRSNAAA-----TTSSCPPSSSKVVVADTLPISLDLTLQFNS 64
           NL L  DSE SS   +N     A+      T SSC  +  K+   D  P+SLDLTL F S
Sbjct: 7   NLELENDSEVSSHVASNISAKEASPGPSKDTNSSCLTNVIKLN-PDPGPLSLDLTLHFKS 66

Query: 65  NDIDS-KGEGEIQGETSSNKSSSSAMPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAK 124
           NDID  KG GE  GE ++ ++ ++ +PRVFSCNYCRRKF+SSQALGGHQNAHKRERTMAK
Sbjct: 67  NDIDRLKGTGETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK 126

Query: 125 RVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDQRPYPGRSVGAKFEQS 184
           R  RMG+F DRY SLASLPLHGSA RSLGI+AH A+HQ V+   QRP P    GA+FEQ 
Sbjct: 127 RAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVV-PPQRP-PDMRGGARFEQG 186

Query: 185 SFGFPTFIDDYDDDVGMFWPGSFRQVAAKVDSSLGPLKTTVQNSNPEFGKTMPPPRTETS 244
            F  P F++  DDD+ +FWPGSFRQV+  V  +  P     Q SN  F    PPPRT++S
Sbjct: 187 YFAMPMFME--DDDIDLFWPGSFRQVSEAVRGN--PTLDFAQGSNGNFAAMPPPPRTDSS 246

Query: 245 SPDLTLRL 247
           +PDLTL+L
Sbjct: 247 APDLTLKL 247

[Close]

BLAST of Cla005809 vs. TrEMBL
Match: M5XEY3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010190mg PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.2e-61
Identity = 142/257 (55.25%), Postives = 171/257 (66.54%), Query Frame = 1


Query: 4   LNLNLAKDSEPSSS-------QEANPDRSNAAATTSSCPPSSSKVVVADTLPISLDLTLQ 63
           LNL    DSE SS        QE + D S  + TTSSC  + + +   D  PISL+LTLQ
Sbjct: 6   LNLEYENDSEVSSQENFNIPLQEESHDLSKDSTTTSSCLTNQTNLQQQDPGPISLNLTLQ 65

Query: 64  FNSNDIDSKGEGEIQG-ETSSNKSSSSAMPRVFSCNYCRRKFFSSQALGGHQNAHKRERT 123
           F+S DI+ KG GE    E ++  +S + MPRVFSCNYC+RKF+SSQALGGHQNAHKRERT
Sbjct: 66  FSSRDIELKGTGETSSTEGAAPPTSEATMPRVFSCNYCKRKFYSSQALGGHQNAHKRERT 125

Query: 124 MAKRVTRMGMFFDRYGSLASLPLHG---SALRSLGIEAHGALHQTV-LASDQR-PYPGRS 183
           MAKR  RMGMF DRY SLASLPLHG   SA RSLGIEAH A+HQ + + SDQR P P   
Sbjct: 126 MAKRAMRMGMFPDRYTSLASLPLHGSAASAFRSLGIEAHAAVHQNIMIPSDQRLPVPDTR 185

Query: 184 VGAKFEQSSFGFPTFIDDYDDDVGMFWPGSFRQVAAKVDSSLGPLKTTVQNSNPEFGKTM 243
             A+F+Q  FG P F++  +DDVGMFWPGSFRQV   V      ++ +   +    G TM
Sbjct: 186 GVARFQQGYFGVPMFME--EDDVGMFWPGSFRQVGEGVGGRHSNMQFSQNPTMNSGGSTM 245

Query: 244 PP-PRTETSSPDLTLRL 247
           PP  +T +SSPDLTL+L
Sbjct: 246 PPNTKTSSSSPDLTLKL 260

[Close]

BLAST of Cla005809 vs. TrEMBL
Match: A0A061E8M6_THECC (Zinc finger protein 4 OS=Theobroma cacao GN=TCM_011244 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-60
Identity = 137/250 (54.80%), Postives = 170/250 (68.00%), Query Frame = 1


Query: 6   LNLAKDSEPSS-------SQEANPDRSNAAATTSSCPPSSSKVVVADTLPISLDLTLQFN 65
           L    DSE SS       +QEA PD S  + TT+SC  +  K    +T  +SLDLTL F 
Sbjct: 8   LESENDSEASSQVASNISAQEATPDASKDSTTTASCLTNPIKAQ-PETGSVSLDLTLHFR 67

Query: 66  SNDIDSKGEGEIQGETSSNKSSSSAMPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAK 125
           + D   KG G+ + E +++ S S+ +PRVFSCNYCRRKF+SSQALGGHQNAHKRERTMAK
Sbjct: 68  ATDAVMKGTGDTRSEIATH-SLSATIPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK 127

Query: 126 RVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDQRPYPGRSVGAKFEQS 185
           R  RMG+F DRY SLASLPLHGS  RSLGI+AH A+HQ +++S QRP   R+ GA+F+Q 
Sbjct: 128 RAMRMGIFSDRYTSLASLPLHGSTFRSLGIKAHSAMHQGIISS-QRPIDTRA-GARFDQG 187

Query: 186 SFGFPTFIDDYDDDVGMFWPGSFRQVAAKVDSSLGP--LKTTVQNSNPEFGKTMPPPRTE 245
            FG P F++  DDDV +FWPGSFRQV   V  +L       + Q+SN  F     PPRT+
Sbjct: 188 YFGMPMFME--DDDVDLFWPGSFRQVNEGVSGNLALEFAPNSTQSSNMGFVAMASPPRTD 247

Query: 246 TSSPDLTLRL 247
           +SSPDLTL+L
Sbjct: 248 SSSPDLTLKL 251

[Close]

BLAST of Cla005809 vs. NCBI nr
Match: gi|700196273|gb|KGN51450.1| (hypothetical protein Csa_5G548160 [Cucumis sativus])

HSP 1 Score: 457.2 bits (1175), Expect = 1.8e-125
Identity = 230/249 (92.37%), Postives = 235/249 (94.38%), Query Frame = 1


Query: 1   MEALNLNL--AKDSEPSSSQEANPDRSNAAATTSSCPPSSSKVVVADTLPISLDLTLQFN 60
           MEALNLNL  AKDSEPSSSQ ANPD SN A TTSSCPPS SKVVV DT PISLDLTLQFN
Sbjct: 1   MEALNLNLEAAKDSEPSSSQAANPDHSNTATTTSSCPPSLSKVVVVDTSPISLDLTLQFN 60

Query: 61  SNDIDSKGEGEIQGETSSNKSSSSAMPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAK 120
           SNDIDSKG+GEI GET+SNKSSSS +PRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAK
Sbjct: 61  SNDIDSKGDGEINGETNSNKSSSSTVPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAK 120

Query: 121 RVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDQRPYPGRSVGAKFEQS 180
           RVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTV+ASDQRPYPGRSVGAKFEQS
Sbjct: 121 RVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVVASDQRPYPGRSVGAKFEQS 180

Query: 181 SFGFPTFIDDYDDDVGMFWPGSFRQVAAKVDSSLGPLKTTVQNSNPEFGKTMPPPRTET- 240
           SFGFPTFI+DYDDDVGMFWPGSFRQVAAKVDS LGPLKTTVQNSNPEFGKTMPPPRTE  
Sbjct: 181 SFGFPTFIEDYDDDVGMFWPGSFRQVAAKVDSGLGPLKTTVQNSNPEFGKTMPPPRTEAG 240

Query: 241 SSPDLTLRL 247
           SSPDLTLRL
Sbjct: 241 SSPDLTLRL 249

[Close]

BLAST of Cla005809 vs. NCBI nr
Match: gi|778703870|ref|XP_004142819.2| (PREDICTED: zinc finger protein 7 [Cucumis sativus])

HSP 1 Score: 457.2 bits (1175), Expect = 1.8e-125
Identity = 230/249 (92.37%), Postives = 235/249 (94.38%), Query Frame = 1


Query: 1   MEALNLNL--AKDSEPSSSQEANPDRSNAAATTSSCPPSSSKVVVADTLPISLDLTLQFN 60
           MEALNLNL  AKDSEPSSSQ ANPD SN A TTSSCPPS SKVVV DT PISLDLTLQFN
Sbjct: 1   MEALNLNLEAAKDSEPSSSQAANPDHSNTATTTSSCPPSLSKVVVVDTSPISLDLTLQFN 60

Query: 61  SNDIDSKGEGEIQGETSSNKSSSSAMPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAK 120
           SNDIDSKG+GEI GET+SNKSSSS +PRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAK
Sbjct: 61  SNDIDSKGDGEINGETNSNKSSSSTVPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAK 120

Query: 121 RVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDQRPYPGRSVGAKFEQS 180
           RVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTV+ASDQRPYPGRSVGAKFEQS
Sbjct: 121 RVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVVASDQRPYPGRSVGAKFEQS 180

Query: 181 SFGFPTFIDDYDDDVGMFWPGSFRQVAAKVDSSLGPLKTTVQNSNPEFGKTMPPPRTET- 240
           SFGFPTFI+DYDDDVGMFWPGSFRQVAAKVDS LGPLKTTVQNSNPEFGKTMPPPRTE  
Sbjct: 181 SFGFPTFIEDYDDDVGMFWPGSFRQVAAKVDSGLGPLKTTVQNSNPEFGKTMPPPRTEAG 240

Query: 241 SSPDLTLRL 247
           SSPDLTLRL
Sbjct: 241 SSPDLTLRL 249

[Close]

BLAST of Cla005809 vs. NCBI nr
Match: gi|659072747|ref|XP_008466973.1| (PREDICTED: zinc finger protein 7-like [Cucumis melo])

HSP 1 Score: 453.4 bits (1165), Expect = 2.6e-124
Identity = 228/249 (91.57%), Postives = 234/249 (93.98%), Query Frame = 1


Query: 1   MEALNLNL--AKDSEPSSSQEANPDRSNAAATTSSCPPSSSKVVVADTLPISLDLTLQFN 60
           ME LNLNL  AKDSEPSSSQEANPD SN A TTSSC PS SKVVVADT P+SLDLTLQFN
Sbjct: 1   METLNLNLEAAKDSEPSSSQEANPDHSNTATTTSSCSPSLSKVVVADTSPLSLDLTLQFN 60

Query: 61  SNDIDSKGEGEIQGETSSNKSSSSAMPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAK 120
           SNDIDSKG+GEI GETSSNKS SS +PRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAK
Sbjct: 61  SNDIDSKGDGEINGETSSNKSPSSTIPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAK 120

Query: 121 RVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDQRPYPGRSVGAKFEQS 180
           RVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTV+ASDQRPYPGRS+GAKFEQS
Sbjct: 121 RVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVVASDQRPYPGRSIGAKFEQS 180

Query: 181 SFGFPTFIDDYDDDVGMFWPGSFRQVAAKVDSSLGPLKTTVQNSNPEFGKTMPPPRT-ET 240
           SFGFPTFI+DYDDDVGMFWPGSFRQVAAKVDSSLGPLKT VQNSNPEFGKTMPPPRT  T
Sbjct: 181 SFGFPTFIEDYDDDVGMFWPGSFRQVAAKVDSSLGPLKTPVQNSNPEFGKTMPPPRTGAT 240

Query: 241 SSPDLTLRL 247
           SSPDLTLRL
Sbjct: 241 SSPDLTLRL 249

[Close]

BLAST of Cla005809 vs. NCBI nr
Match: gi|567911571|ref|XP_006448099.1| (hypothetical protein CICLE_v10016402mg [Citrus clementina])

HSP 1 Score: 247.7 bits (631), Expect = 2.2e-62
Identity = 140/248 (56.45%), Postives = 168/248 (67.74%), Query Frame = 1


Query: 5   NLNLAKDSEPSSSQEANPDRSNAAA-----TTSSCPPSSSKVVVADTLPISLDLTLQFNS 64
           NL L  DSE SS   +N     A+      T SSC  +  K+   D  P+SLDLTL F S
Sbjct: 7   NLELENDSEVSSHVASNISAKEASPGPSKDTNSSCLTNVIKLN-PDPGPLSLDLTLHFKS 66

Query: 65  NDIDS-KGEGEIQGETSSNKSSSSAMPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAK 124
           NDID  KG GE  GE ++ ++ ++ +PRVFSCNYCRRKF+SSQALGGHQNAHKRERTMAK
Sbjct: 67  NDIDRLKGTGETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK 126

Query: 125 RVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDQRPYPGRSVGAKFEQS 184
           R  RMG+F DRY SLASLPLHGSA RSLGI+AH A+HQ V+   QRP P    GA+FEQ 
Sbjct: 127 RAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVV-PPQRP-PDMRGGARFEQG 186

Query: 185 SFGFPTFIDDYDDDVGMFWPGSFRQVAAKVDSSLGPLKTTVQNSNPEFGKTMPPPRTETS 244
            F  P F++  DDD+ +FWPGSFRQV+  V  +  P     Q SN  F    PPPRT++S
Sbjct: 187 YFAMPMFME--DDDIDLFWPGSFRQVSEAVRGN--PTLDFAQGSNGNFAAMPPPPRTDSS 246

Query: 245 SPDLTLRL 247
           +PDLTL+L
Sbjct: 247 APDLTLKL 247

[Close]

BLAST of Cla005809 vs. NCBI nr
Match: gi|596190899|ref|XP_007223488.1| (hypothetical protein PRUPE_ppa010190mg [Prunus persica])

HSP 1 Score: 243.8 bits (621), Expect = 3.1e-61
Identity = 142/257 (55.25%), Postives = 171/257 (66.54%), Query Frame = 1


Query: 4   LNLNLAKDSEPSSS-------QEANPDRSNAAATTSSCPPSSSKVVVADTLPISLDLTLQ 63
           LNL    DSE SS        QE + D S  + TTSSC  + + +   D  PISL+LTLQ
Sbjct: 6   LNLEYENDSEVSSQENFNIPLQEESHDLSKDSTTTSSCLTNQTNLQQQDPGPISLNLTLQ 65

Query: 64  FNSNDIDSKGEGEIQG-ETSSNKSSSSAMPRVFSCNYCRRKFFSSQALGGHQNAHKRERT 123
           F+S DI+ KG GE    E ++  +S + MPRVFSCNYC+RKF+SSQALGGHQNAHKRERT
Sbjct: 66  FSSRDIELKGTGETSSTEGAAPPTSEATMPRVFSCNYCKRKFYSSQALGGHQNAHKRERT 125

Query: 124 MAKRVTRMGMFFDRYGSLASLPLHG---SALRSLGIEAHGALHQTV-LASDQR-PYPGRS 183
           MAKR  RMGMF DRY SLASLPLHG   SA RSLGIEAH A+HQ + + SDQR P P   
Sbjct: 126 MAKRAMRMGMFPDRYTSLASLPLHGSAASAFRSLGIEAHAAVHQNIMIPSDQRLPVPDTR 185

Query: 184 VGAKFEQSSFGFPTFIDDYDDDVGMFWPGSFRQVAAKVDSSLGPLKTTVQNSNPEFGKTM 243
             A+F+Q  FG P F++  +DDVGMFWPGSFRQV   V      ++ +   +    G TM
Sbjct: 186 GVARFQQGYFGVPMFME--EDDVGMFWPGSFRQVGEGVGGRHSNMQFSQNPTMNSGGSTM 245

Query: 244 PP-PRTETSSPDLTLRL 247
           PP  +T +SSPDLTL+L
Sbjct: 246 PPNTKTSSSSPDLTLKL 260

The following BLAST results are available for this feature:

BLAST of Cla005809 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZFP4_ARATH	3.4e-31	38.58	Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2	[more]
ZFP7_ARATH	1.1e-26	41.79	Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1	[more]
ZFP1_ARATH	3.8e-19	36.45	Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1	[more]
ZFP3_ARATH	2.8e-17	54.12	Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1	[more]
ZFP2_ARATH	2.4e-13	54.93	Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1	[more]

BLAST of Cla005809 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPA2_CUCSA	1.2e-125	92.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G548160 PE=4 SV=1	[more]
V4UB17_9ROSI	1.5e-62	56.45	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016402mg PE=4 SV=1	[more]
A0A067F403_CITSI	1.5e-62	56.45	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047746mg PE=4 SV=1	[more]
M5XEY3_PRUPE	2.2e-61	55.25	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010190mg PE=4 SV=1	[more]
A0A061E8M6_THECC	1.1e-60	54.80	Zinc finger protein 4 OS=Theobroma cacao GN=TCM_011244 PE=4 SV=1	[more]

BLAST of Cla005809 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700196273\|gb\|KGN51450.1\|	1.8e-125	92.37	hypothetical protein Csa_5G548160 [Cucumis sativus]	[more]
gi\|778703870\|ref\|XP_004142819.2\|	1.8e-125	92.37	PREDICTED: zinc finger protein 7 [Cucumis sativus]	[more]
gi\|659072747\|ref\|XP_008466973.1\|	2.6e-124	91.57	PREDICTED: zinc finger protein 7-like [Cucumis melo]	[more]
gi\|567911571\|ref\|XP_006448099.1\|	2.2e-62	56.45	hypothetical protein CICLE_v10016402mg [Citrus clementina]	[more]
gi\|596190899\|ref\|XP_007223488.1\|	3.1e-61	55.25	hypothetical protein PRUPE_ppa010190mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU45700	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla005809	Cla005809.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU45700	WMU45700	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 90..110 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 88..115 score: 11
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 86..116 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla005809	Cla97C01G007050	Watermelon (97103) v2	wmwmbB236
Cla005809	Csa5G548160	Cucumber (Chinese Long) v2	cuwmB416
Cla005809	MELO3C005248	Melon (DHL92) v3.5.1	mewmB030
Cla005809	ClCG01G006720	Watermelon (Charleston Gray)	wcgwmB143
Cla005809	CSPI05G19080	Wild cucumber (PI 183967)	cpiwmB425
Cla005809	Cucsa.012010	Cucumber (Gy14) v1	cgywmB363
Cla005809	CmaCh04G021450	Cucurbita maxima (Rimu)	cmawmB710
Cla005809	CmoCh04G022370	Cucurbita moschata (Rifu)	cmowmB706
Cla005809	Lsi09G007090	Bottle gourd (USVL1VR-Ls)	lsiwmB028
Cla005809	CsGy5G018500	Cucumber (Gy14) v2	cgybwmB389
Cla005809	MELO3C005248.2	Melon (DHL92) v3.6.1	medwmB028
Cla005809	Carg25252	Silver-seed gourd	carwmB0883
Cla005809	CsaV3_5G027820	Cucumber (Chinese Long) v3	cucwmB441
Cla005809	Bhi12G000846	Wax gourd	wgowmB075

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla005809	Cucurbita maxima (Rimu)	cmawmB278
Cla005809	Cucurbita moschata (Rifu)	cmowmB268
Cla005809	Cucurbita pepo (Zucchini)	cpewmB184
Cla005809	Cucurbita pepo (Zucchini)	cpewmB440
Cla005809	Silver-seed gourd	carwmB0830