CSPI05G19080 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATACTTCTTTTTTCCCCTTTTAGGTCTCTCTTTCTCTCTCTCTTTCATTATTAGTGGGAGACTGTAAGAAGAGAATAAACGATTTTAACCAAAAAAAGATATGGCATTTGATCACCTTCCGCCCTGGAATTTATAGTTATATCAAAACATTCAAAACAGCTTCCCTCTTATCTCTCTTCCTTCTTTCAATTAGGATTATTAGGTTTCATACTTCCGATTTGAATAATGGAACTGTCCAAATTTCAACTAAAATAATGGGTTTTCCATTCTGATTCTGCAACTTTACACCATATCTTCCATCCCACCACATCCCTCTTTCTCTCACTCTCTCTCTCTCTCCATTTATTTCCTCTGTCGAATCTTACCCACTCCATAACCAGTAAAGGCTATGGAAACCCACCTCCCTCTTCTCTGCCCCTTCTCACTTCTACACTCTGCTTCTCACTGCCGCTGCCATAGCCTTCAACGCAGAGCTTAGCCCTTAAGGGCACTCCAGATTCTTCAACCCCCATATGTATGTCACCTCTAATTCCAACCCCCTTCTTTTGTTTTTGCCTGATTGCCCCACTTCTGTTTTGATTCTGCTCTGCTTTCTTTTAGGTGTTTTGTTCGTGATGATGATGAGATGAAATCCCTTTTTTTCTGGGTAATGATTATTCTCTTGGTGGGGTTTTCTATTGTTTCTTACTTAGAATTGTTTCTGGCGTTTCCCCCCTTTGCATTACTGGGACTGCTGAGGTTGGTGATTGTGTGTTTTGCTGTGCTTCCATGGTGCTTTTTGTTGTGGCCGGCCTTGTGTCTGCCAGTTTTATGTGAGATGTTTGGTTGTGTTTAAGTTTCGAGTGTAAAAAGGAAGTTTATATAAACCTAGGTTTATGTAGAGATTTGTATTTTTGTAGTTTGTGACGAACAATTGCGTATACCAATCCTAAGTTTGGCTTCTTGATCTCAAGTTATTGGAGCTGAATCCCTGAATCAAAGTCTGGTGGAGTTTATTTCTGGGTCCATACTTGTTTCTTGTTCTTCATTAGTTCAAATTCAAAGGTATTTATAGTAGAAAAACTGCAGAAATGTTGAGACTTATGGCTTTTACATGGATCCATAGCAAAAGGCAGATCCAGTATTTGGACTTCTTTCTCAAATGAAGAAGAAAAGATCATCATAAACTTGGATATTCTATATGCTGCAGCCCGTTAGTTTGAACCCTTTTAGGTTTAGGGGTGATTTAACATGGCTCTAAAGTTTGAAGTCATAATTCTCAACTACTTCAGTTTCATCTCCTTTCCATTTCTTTTGAGTAGTTCATATATTGAGCCTCTTAAATCCAAAATTTTCCAACTTGGCATGTGAGAGGAAATGCTGGATGTGCCAAGTGATTGAATTTTAGGAAAAAAATTATTTTCTCTTGTATCCCTATACTTAACTCAATGAGTCCATGTTGACATTGAGTTTTAAATTTCATCAAATATATCCTCGAACTTGATTTCATGATGAAATTGATACTCTCGATTAGTTGAAATTTCTCTGTTCTGAGATTTAGACTATCTATAGGTGTTTGGAGGAGATTGTTTTTGTGTATATTTATCTTGTGCTTGTGTTGGATTTTTTTTTTTATTGAGTTTGGATATTTTGTTGACCTTGCGCACTTTTACTTGATTTTTCTTGTAAGGTACAACTTACAAGTATCTTTCTTGTGGTGGGGTTGTCCAGTATTTTGGTGCTTTGATTTTGAGTGTTTTGATTGTTCGTTTGGTTTATTGAAGTGTAAATTTCACCTCTTAATCAAGTTGGAGGGTTAGGGTCCAATCACAATCATAAACATAAAAATTAACCCACTAAGTATAGGAGGTATTAGGAAACTATCTTTTAATGTGCTCTATCTAATCAACTGAAGCCTTTGGAGTTTGGACCTACTAGTTATATTATAACTGTTTGAATATCATTTAAGATATAAACAAATAAAATGTCGAAGATATGAATAGCATCAGCACTTCTTTGCATTTTCTTTCCCACTATTATGCAATTAACTGGGAGCAACATTAACTTATATGATTGTTTTTGTGATTCTGAACACAGAAGGAAAAAGAGTGATTCTTTGTTTTGGAAGCCTCTGGTTCTTTACTTTCAGCGCTATTCATCCAAATATGGAAGCTTTAAATTTAAACCTTGAAGCTGCAAAAGATTCAGAGCCCAGCAGCAGTCAAGCAGCAAATCCTGATCACTCCAACACTGCCACTACCACTTCTTCCTGTCCACCAAGCTTGAGTAAAGTAGTCGTTGTTGATACAAGTCCCATTTCACTTGACTTGACACTGCAGTTCAACTCCAACGATATCGATTCAAAGGGTGATGGCGAGATCAATGGGGAAACAAATAGTAACAAATCATCATCTTCAACAGTACCAAGAGTTTTCTCTTGCAATTACTGTCGACGCAAGTTCTTTAGCTCACAAGCACTTGGTGGGCATCAAAATGCACACAAAAGAGAAAGGACAATGGCTAAACGTGTAACACGGATGGGAATGTTCTTCGACAGATACGGTAGCTTGGCTTCTCTGCCACTTCATGGCTCAGCTCTAAGATCCCTTGGCATTGAAGCTCACGGTGCTCTACACCAAACAGTTGTTGCTTCAGATCAGAGGCCTTATCCTGGTAGGAGTGTTGGAGCAAAGTTCGAGCAAAGCTCTTTTGGGTTCCCAACATTCATCGAGGACTACGATGATGATGTAGGGATGTTTTGGCCCGGAAGTTTCAGGCAGGTGGCTGCCAAAGTCGATAGCGGCTTAGGTCCTTTGAAAACCACAGTTCAAAATTCAAATCCAGAGTTTGGGAAAACAATGCCTCCACCAAGAACAGAAGCAGGATCATCACCTGATCTCACTTTGAGGCTTTAGTAAGTAATTTTCTTCTCTTTGATGCCTTCTCCTTAATGTATCAACTTTTGTAAAGTGGGATGATGTCTGCCATTGTCTGCCATCTTTTTAGTGGCTCTAAGCTCAAGAATTATTGAATAAATCTTCAATTTTTTTTTTTCTCATTACCTTTACTAATATCCAAGTCTTTAGCTTTTTGATCCCTTGATTCCTTTTTCTTTCCAATTTTTGTCCATGGATTCCAAAAGCTTCTATTATAATCTCTCCATTATTTGGATAAT ATGGAAGCTTTAAATTTAAACCTTGAAGCTGCAAAAGATTCAGAGCCCAGCAGCAGTCAAGCAGCAAATCCTGATCACTCCAACACTGCCACTACCACTTCTTCCTGTCCACCAAGCTTGAGTAAAGTAGTCGTTGTTGATACAAGTCCCATTTCACTTGACTTGACACTGCAGTTCAACTCCAACGATATCGATTCAAAGGGTGATGGCGAGATCAATGGGGAAACAAATAGTAACAAATCATCATCTTCAACAGTACCAAGAGTTTTCTCTTGCAATTACTGTCGACGCAAGTTCTTTAGCTCACAAGCACTTGGTGGGCATCAAAATGCACACAAAAGAGAAAGGACAATGGCTAAACGTGTAACACGGATGGGAATGTTCTTCGACAGATACGGTAGCTTGGCTTCTCTGCCACTTCATGGCTCAGCTCTAAGATCCCTTGGCATTGAAGCTCACGGTGCTCTACACCAAACAGTTGTTGCTTCAGATCAGAGGCCTTATCCTGGTAGGAGTGTTGGAGCAAAGTTCGAGCAAAGCTCTTTTGGGTTCCCAACATTCATCGAGGACTACGATGATGATGTAGGGATGTTTTGGCCCGGAAGTTTCAGGCAGGTGGCTGCCAAAGTCGATAGCGGCTTAGGTCCTTTGAAAACCACAGTTCAAAATTCAAATCCAGAGTTTGGGAAAACAATGCCTCCACCAAGAACAGAAGCAGGATCATCACCTGATCTCACTTTGAGGCTTTAG ATGGAAGCTTTAAATTTAAACCTTGAAGCTGCAAAAGATTCAGAGCCCAGCAGCAGTCAAGCAGCAAATCCTGATCACTCCAACACTGCCACTACCACTTCTTCCTGTCCACCAAGCTTGAGTAAAGTAGTCGTTGTTGATACAAGTCCCATTTCACTTGACTTGACACTGCAGTTCAACTCCAACGATATCGATTCAAAGGGTGATGGCGAGATCAATGGGGAAACAAATAGTAACAAATCATCATCTTCAACAGTACCAAGAGTTTTCTCTTGCAATTACTGTCGACGCAAGTTCTTTAGCTCACAAGCACTTGGTGGGCATCAAAATGCACACAAAAGAGAAAGGACAATGGCTAAACGTGTAACACGGATGGGAATGTTCTTCGACAGATACGGTAGCTTGGCTTCTCTGCCACTTCATGGCTCAGCTCTAAGATCCCTTGGCATTGAAGCTCACGGTGCTCTACACCAAACAGTTGTTGCTTCAGATCAGAGGCCTTATCCTGGTAGGAGTGTTGGAGCAAAGTTCGAGCAAAGCTCTTTTGGGTTCCCAACATTCATCGAGGACTACGATGATGATGTAGGGATGTTTTGGCCCGGAAGTTTCAGGCAGGTGGCTGCCAAAGTCGATAGCGGCTTAGGTCCTTTGAAAACCACAGTTCAAAATTCAAATCCAGAGTTTGGGAAAACAATGCCTCCACCAAGAACAGAAGCAGGATCATCACCTGATCTCACTTTGAGGCTTTAG
BLAST of CSPI05G19080 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2) HSP 1 Score: 122.9 bits (307), Expect = 5.2e-27 Identity = 106/284 (37.32%), Postives = 134/284 (47.18%), Query Frame = 1
BLAST of CSPI05G19080 vs. Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.4e-24 Identity = 83/198 (41.92%), Postives = 103/198 (52.02%), Query Frame = 1
BLAST of CSPI05G19080 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.7e-17 Identity = 68/183 (37.16%), Postives = 93/183 (50.82%), Query Frame = 1
BLAST of CSPI05G19080 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 4.8e-17 Identity = 47/85 (55.29%), Postives = 60/85 (70.59%), Query Frame = 1
BLAST of CSPI05G19080 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.4e-11 Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 1
BLAST of CSPI05G19080 vs. TrEMBL
Match: A0A0A0KPA2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G548160 PE=4 SV=1) HSP 1 Score: 490.0 bits (1260), Expect = 1.8e-135 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1
BLAST of CSPI05G19080 vs. TrEMBL
Match: V4UB17_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016402mg PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 9.4e-60 Identity = 145/251 (57.77%), Postives = 170/251 (67.73%), Query Frame = 1
BLAST of CSPI05G19080 vs. TrEMBL
Match: A0A067F403_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047746mg PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 9.4e-60 Identity = 145/251 (57.77%), Postives = 170/251 (67.73%), Query Frame = 1
BLAST of CSPI05G19080 vs. TrEMBL
Match: M5XEY3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010190mg PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 2.7e-59 Identity = 148/262 (56.49%), Postives = 176/262 (67.18%), Query Frame = 1
BLAST of CSPI05G19080 vs. TrEMBL
Match: A0A061E8M6_THECC (Zinc finger protein 4 OS=Theobroma cacao GN=TCM_011244 PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.0e-57 Identity = 141/254 (55.51%), Postives = 171/254 (67.32%), Query Frame = 1
BLAST of CSPI05G19080 vs. TAIR10
Match: AT1G66140.1 (AT1G66140.1 zinc finger protein 4) HSP 1 Score: 122.9 bits (307), Expect = 2.9e-28 Identity = 106/284 (37.32%), Postives = 134/284 (47.18%), Query Frame = 1
BLAST of CSPI05G19080 vs. TAIR10
Match: AT1G24625.1 (AT1G24625.1 zinc finger protein 7) HSP 1 Score: 114.8 bits (286), Expect = 7.9e-26 Identity = 83/198 (41.92%), Postives = 103/198 (52.02%), Query Frame = 1
BLAST of CSPI05G19080 vs. TAIR10
Match: AT1G80730.1 (AT1G80730.1 zinc-finger protein 1) HSP 1 Score: 91.3 bits (225), Expect = 9.4e-19 Identity = 68/183 (37.16%), Postives = 93/183 (50.82%), Query Frame = 1
BLAST of CSPI05G19080 vs. TAIR10
Match: AT5G25160.1 (AT5G25160.1 zinc finger protein 3) HSP 1 Score: 89.7 bits (221), Expect = 2.7e-18 Identity = 47/85 (55.29%), Postives = 60/85 (70.59%), Query Frame = 1
BLAST of CSPI05G19080 vs. TAIR10
Match: AT5G10970.1 (AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein) HSP 1 Score: 86.3 bits (212), Expect = 3.0e-17 Identity = 49/87 (56.32%), Postives = 60/87 (68.97%), Query Frame = 1
BLAST of CSPI05G19080 vs. NCBI nr
Match: gi|778703870|ref|XP_004142819.2| (PREDICTED: zinc finger protein 7 [Cucumis sativus]) HSP 1 Score: 495.0 bits (1273), Expect = 8.0e-137 Identity = 251/252 (99.60%), Postives = 252/252 (100.00%), Query Frame = 1
BLAST of CSPI05G19080 vs. NCBI nr
Match: gi|700196273|gb|KGN51450.1| (hypothetical protein Csa_5G548160 [Cucumis sativus]) HSP 1 Score: 490.0 bits (1260), Expect = 2.6e-135 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1
BLAST of CSPI05G19080 vs. NCBI nr
Match: gi|659072747|ref|XP_008466973.1| (PREDICTED: zinc finger protein 7-like [Cucumis melo]) HSP 1 Score: 471.1 bits (1211), Expect = 1.2e-129 Identity = 238/252 (94.44%), Postives = 243/252 (96.43%), Query Frame = 1
BLAST of CSPI05G19080 vs. NCBI nr
Match: gi|1009154763|ref|XP_015895350.1| (PREDICTED: zinc finger protein 4-like [Ziziphus jujuba]) HSP 1 Score: 243.0 bits (619), Expect = 5.5e-61 Identity = 146/255 (57.25%), Postives = 177/255 (69.41%), Query Frame = 1
BLAST of CSPI05G19080 vs. NCBI nr
Match: gi|567911571|ref|XP_006448099.1| (hypothetical protein CICLE_v10016402mg [Citrus clementina]) HSP 1 Score: 238.4 bits (607), Expect = 1.3e-59 Identity = 145/251 (57.77%), Postives = 170/251 (67.73%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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