Carg25252 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25252
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	zinc finger protein 7-like
Location	Cucurbita_argyrosperma_scaffold_210 : 158663 .. 159948 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAGTTTCCATGAATCTAGGTTTATGTAGGCGTAAGATTTGTGAAATTGTAGTTTGGGATGAACAAATATATATGCTAATCTTAAGCTTAGCTTCTTGATATCAAGTTCTGGTAGAACAGCTGCTGAAGTGTTGAGGGCTTGTGGCCTTTTTCATGGATTCATAGCCAAAGATTGATCATGTATTAGGGCTCATTAGCATAAACTTTTAGGAAAAATGTCATGTTCTTGAACGTTCTTCTCCATTATTGTGCAATGCAGAAGCAACATGAACTTATTTGATTGTTCTTGTAATTCTTAAAACAGAAGGAAAAGAAGGGATTCTCTGTGTTTGGAAGCCTCTGGTTCTTAACTTTTTTGGACAATTCATTCAAATAATGGAAACTTTAGATTTCAATATTGAAGCTGCTAAAGATTCAGAGCCTAGCAGTAGTCAAGAAGCAAATCCTGATCACTCTAACACTGGCACTGCCAGTTCTTCCTGCCCTCCAAGCTCGAGTGAAGTTGCTGTTGCTGTTGCTGATGCAGTGCCCATTTCACTTGACTTGACACTTCAGTTTAACTCCAACGATATCGAATCGAAGGGTGATGGTGATGGCGAGAATCACGGGGAAACAAATGGTAACAAATCGTCGTCTGCATCGACGCCGAGAGTTTTCTCTTGCAATTACTGTCGACGTAAGTTCTTCAGCTCGCAGGCGCTTGGTGGGCATCAAAATGCACACAAAAGAGAGAGGACAATGGCTAAACGTGTAACTCGAATGGGAATGTTCTTCGATCGATACGGTAGCTTGGCGTCGCTGCCTCTTCATGGCTCAGCTCTTAGATCACTCGGCATTGAAGCTCATGGTGCTCTACACCAAACAGTTCTAGCTTCAGATCACAGGCCTTATCCTGGTAGGAGTGTTGGAGCAAAGTTTGAGCATAGCACTTTCGGGTTCCCGACATTCGTTGAGGAATACGAGGACGATGTCGGGATGTTTTGGCCAGGAAGCTTCAGGCAGGTGGCTGCCAAAGTTGATAGCAGCTTAGGCCCTTTGAAATCCACAGTTCAAATTTCGGATTCAGAGTTTGGGAAGACAATTCCTCCTCCACCAAGAACAGAAGAATCATCTCCTGATCTCACTTTGAGGCTTTAGTAAGTAATTTTCGTTTTGATGCCTTCTTCTTAATGTATCAACTTTTGTAAAGTGGGATGTGTCTGCCATTGTCTGCCATTTTTTAGTGGTTCTAAGCTTATGAATTGTTGAATAAATCTTCAAATTTTTTCTTTTTGTGCCAA

mRNA sequence

ATGGAGGAAGTTTCCATGAATCTAGAAGGAAAAGAAGGGATTCTCTGTGTTTGGAAGCCTCTGGTTCTTAACTTTTTTGGACAATTCATTCAAATAATGGAAACTTTAGATTTCAATATTGAAGCTGCTAAAGATTCAGAGCCTAGCAGTAGTCAAGAAGCAAATCCTGATCACTCTAACACTGGCACTGCCAGTTCTTCCTGCCCTCCAAGCTCGAGTGAAGTTGCTGTTGCTGTTGCTGATGCAGTGCCCATTTCACTTGACTTGACACTTCAGTTTAACTCCAACGATATCGAATCGAAGGGTGATGGTGATGGCGAGAATCACGGGGAAACAAATGGTAACAAATCGTCGTCTGCATCGACGCCGAGAGTTTTCTCTTGCAATTACTGTCGACGTAAGTTCTTCAGCTCGCAGGCGCTTGGTGGGCATCAAAATGCACACAAAAGAGAGAGGACAATGGCTAAACGTGTAACTCGAATGGGAATGTTCTTCGATCGATACGGTAGCTTGGCGTCGCTGCCTCTTCATGGCTCAGCTCTTAGATCACTCGGCATTGAAGCTCATGGTGCTCTACACCAAACAGTTCTAGCTTCAGATCACAGGCCTTATCCTGGTAGGAGTGTTGGAGCAAAGTTTGAGCATAGCACTTTCGGGTTCCCGACATTCGTTGAGGAATACGAGGACGATGTCGGGATGTTTTGGCCAGGAAGCTTCAGGCAGGTGGCTGCCAAAGTTGATAGCAGCTTAGGCCCTTTGAAATCCACAGTTCAAATTTCGGATTCAGAGTTTGGGAAGACAATTCCTCCTCCACCAAGAACAGAAGAATCATCTCCTGATCTCACTTTGAGGCTTTAGTAAGTAATTTTCGTTTTGATGCCTTCTTCTTAATGTATCAACTTTTGTAAAGTGGGATGTGTCTGCCATTGTCTGCCATTTTTTAGTGGTTCTAAGCTTATGAATTGTTGAATAAATCTTCAAATTTTTTCTTTTTGTGCCAA

Coding sequence (CDS)

ATGGAGGAAGTTTCCATGAATCTAGAAGGAAAAGAAGGGATTCTCTGTGTTTGGAAGCCTCTGGTTCTTAACTTTTTTGGACAATTCATTCAAATAATGGAAACTTTAGATTTCAATATTGAAGCTGCTAAAGATTCAGAGCCTAGCAGTAGTCAAGAAGCAAATCCTGATCACTCTAACACTGGCACTGCCAGTTCTTCCTGCCCTCCAAGCTCGAGTGAAGTTGCTGTTGCTGTTGCTGATGCAGTGCCCATTTCACTTGACTTGACACTTCAGTTTAACTCCAACGATATCGAATCGAAGGGTGATGGTGATGGCGAGAATCACGGGGAAACAAATGGTAACAAATCGTCGTCTGCATCGACGCCGAGAGTTTTCTCTTGCAATTACTGTCGACGTAAGTTCTTCAGCTCGCAGGCGCTTGGTGGGCATCAAAATGCACACAAAAGAGAGAGGACAATGGCTAAACGTGTAACTCGAATGGGAATGTTCTTCGATCGATACGGTAGCTTGGCGTCGCTGCCTCTTCATGGCTCAGCTCTTAGATCACTCGGCATTGAAGCTCATGGTGCTCTACACCAAACAGTTCTAGCTTCAGATCACAGGCCTTATCCTGGTAGGAGTGTTGGAGCAAAGTTTGAGCATAGCACTTTCGGGTTCCCGACATTCGTTGAGGAATACGAGGACGATGTCGGGATGTTTTGGCCAGGAAGCTTCAGGCAGGTGGCTGCCAAAGTTGATAGCAGCTTAGGCCCTTTGAAATCCACAGTTCAAATTTCGGATTCAGAGTTTGGGAAGACAATTCCTCCTCCACCAAGAACAGAAGAATCATCTCCTGATCTCACTTTGAGGCTTTAG

Protein sequence

MEEVSMNLEGKEGILCVWKPLVLNFFGQFIQIMETLDFNIEAAKDSEPSSSQEANPDHSNTGTASSSCPPSSSEVAVAVADAVPISLDLTLQFNSNDIESKGDGDGENHGETNGNKSSSASTPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDHRPYPGRSVGAKFEHSTFGFPTFVEEYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGKTIPPPPRTEESSPDLTLRL

Homology

[Close]

BLAST of Carg25252 vs. NCBI nr
Match: XP_022922104.1 (zinc finger protein 4-like [Cucurbita moschata])

HSP 1 Score: 358.6 bits (919), Expect = 2.0e-95
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 33  METLDFNIEAAKDSEPSSSQEANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 92
           METLDFNIEAAKDSEPSSSQEANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   METLDFNIEAAKDSEPSSSQEANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 93  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRVFSCNYCRRKFFSSQALGGHQNAHKRER 152
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRVFSCNYCRRKFFSSQALGGHQNAHKRER
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRVFSCNYCRRKFFSSQALGGHQNAHKRER 120

Query: 153 TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDHRPYPGRSVGAK 212
           TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDHRPYPGRSVGAK
Sbjct: 121 TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDHRPYPGRSVGAK 180

Query: 213 FEHSTFGFPTFVEEYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGKTIPPPP 272
           FEHSTFGFPTFVEEYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGKTIPPPP
Sbjct: 181 FEHSTFGFPTFVEEYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGKTIPPPP 240

Query: 273 RTEESSPDLTLRL 286
           RTEESSPDLTLRL
Sbjct: 241 RTEESSPDLTLRL 253

[Close]

BLAST of Carg25252 vs. NCBI nr
Match: XP_023521257.1 (zinc finger protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.8 bits (904), Expect = 1.1e-93
Identity = 251/253 (99.21%), Postives = 251/253 (99.21%), Query Frame = 0


Query: 33  METLDFNIEAAKDSEPSSSQEANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 92
           METLDFNIEAAKDSEPSSSQEANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   METLDFNIEAAKDSEPSSSQEANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 93  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRVFSCNYCRRKFFSSQALGGHQNAHKRER 152
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRVFSCNYCRRKFFSSQALGGHQNAHKRER
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRVFSCNYCRRKFFSSQALGGHQNAHKRER 120

Query: 153 TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDHRPYPGRSVGAK 212
           TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDHRPYPGRSVGAK
Sbjct: 121 TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDHRPYPGRSVGAK 180

Query: 213 FEHSTFGFPTFVEEYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGKTIPPPP 272
           FEHS FGFPTFVEEYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGKTIP PP
Sbjct: 181 FEHSAFGFPTFVEEYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGKTIPLPP 240

Query: 273 RTEESSPDLTLRL 286
           RTEESSPDLTLRL
Sbjct: 241 RTEESSPDLTLRL 253

[Close]

BLAST of Carg25252 vs. NCBI nr
Match: XP_022991196.1 (zinc finger protein 7-like [Cucurbita maxima])

HSP 1 Score: 351.3 bits (900), Expect = 3.1e-93
Identity = 249/253 (98.42%), Postives = 250/253 (98.81%), Query Frame = 0


Query: 33  METLDFNIEAAKDSEPSSSQEANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 92
           METLDFNIEAAKDSEPSSSQEANP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   METLDFNIEAAKDSEPSSSQEANP--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 93  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRVFSCNYCRRKFFSSQALGGHQNAHKRER 152
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRVFSCNYCRRKFFSSQALGGHQNAHKRER
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRVFSCNYCRRKFFSSQALGGHQNAHKRER 120

Query: 153 TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDHRPYPGRSVGAK 212
           TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDHRPYPGRSVGAK
Sbjct: 121 TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDHRPYPGRSVGAK 180

Query: 213 FEHSTFGFPTFVEEYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGKTIPPPP 272
           FEHS FGFPTFV+EYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGKTIPPPP
Sbjct: 181 FEHSAFGFPTFVQEYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGKTIPPPP 240

Query: 273 RTEESSPDLTLRL 286
           RTEESSPDLTLRL
Sbjct: 241 RTEESSPDLTLRL 251

[Close]

BLAST of Carg25252 vs. NCBI nr
Match: XP_008466973.1 (PREDICTED: zinc finger protein 7-like [Cucumis melo] >XP_008466976.1 PREDICTED: zinc finger protein 7-like [Cucumis melo])

HSP 1 Score: 310.8 bits (795), Expect = 4.7e-81
Identity = 177/253 (69.96%), Postives = 188/253 (74.31%), Query Frame = 0


Query: 33  METLDFNIEAAKDSEPSSSQEANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 92
           METL+ N+EAAKDSEPSSSQEANP       XXXXXXXXXXXX                 
Sbjct: 1   METLNLNLEAAKDSEPSSSQEANP----DHSXXXXXXXXXXXXLSKVVVADTSPLSLDLT 60

Query: 93  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRVFSCNYCRRKFFSSQALGGHQNAHKRER 152
                                         PRVFSCNYCRRKFFSSQALGGHQNAHKRER
Sbjct: 61  LQFNSNDIDSKGDGEINGETSSNKSPSSTIPRVFSCNYCRRKFFSSQALGGHQNAHKRER 120

Query: 153 TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDHRPYPGRSVGAK 212
           TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTV+ASD RPYPGRS+GAK
Sbjct: 121 TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVVASDQRPYPGRSIGAK 180

Query: 213 FEHSTFGFPTFVEEYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGKTIPPPP 272
           FE S+FGFPTF+E+Y+DDVGMFWPGSFRQVAAKVDSSLGPLK+ VQ S+ EFGKT+PPP 
Sbjct: 181 FEQSSFGFPTFIEDYDDDVGMFWPGSFRQVAAKVDSSLGPLKTPVQNSNPEFGKTMPPPR 240

Query: 273 RTEESSPDLTLRL 286
               SSPDLTLRL
Sbjct: 241 TGATSSPDLTLRL 249

[Close]

BLAST of Carg25252 vs. NCBI nr
Match: KGN51450.1 (hypothetical protein Csa_5G548160 [Cucumis sativus])

HSP 1 Score: 308.1 bits (788), Expect = 3.0e-80
Identity = 164/253 (64.82%), Postives = 174/253 (68.77%), Query Frame = 0


Query: 33  METLDFNIEAAKDSEPSSSQEANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 92
           ME L+ N+EAAKDSEPSSSQ ANP                                    
Sbjct: 1   MEALNLNLEAAKDSEPSSSQAANP----DHSNTATTTSSCPPSLSKVVVVDTSPISLDLT 60

Query: 93  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRVFSCNYCRRKFFSSQALGGHQNAHKRER 152
                                         PRVFSCNYCRRKFFSSQALGGHQNAHKRER
Sbjct: 61  LQFNSNDIDSKGDGEINGETNSNKSSSSTVPRVFSCNYCRRKFFSSQALGGHQNAHKRER 120

Query: 153 TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDHRPYPGRSVGAK 212
           TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTV+ASD RPYPGRSVGAK
Sbjct: 121 TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVVASDQRPYPGRSVGAK 180

Query: 213 FEHSTFGFPTFVEEYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGKTIPPPP 272
           FE S+FGFPTF+E+Y+DDVGMFWPGSFRQVAAKVDS LGPLK+TVQ S+ EFGKT+PPP 
Sbjct: 181 FEQSSFGFPTFIEDYDDDVGMFWPGSFRQVAAKVDSGLGPLKTTVQNSNPEFGKTMPPPR 240

Query: 273 RTEESSPDLTLRL 286
               SSPDLTLRL
Sbjct: 241 TEAGSSPDLTLRL 249

[Close]

BLAST of Carg25252 vs. TAIR10
Match: AT1G66140.1 (zinc finger protein 4)

HSP 1 Score: 114.8 bits (286), Expect = 8.9e-26
Identity = 79/190 (41.58%), Postives = 99/190 (52.11%), Query Frame = 0


Query: 124 RVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGM--FFDRYGS----------- 183
           RVFSCNYC+RKF+SSQALGGHQNAHKRERT+AKR  RMG+   F   GS           
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAA 142

Query: 184 -LASLPLHGS------ALRSLGIEAHGALHQTVLASDHRPYPGRSVGAKFEHSTFG--FP 243
            L+ LPLHGS      + R+LGI AH + H   +         R++ A+F    FG   P
Sbjct: 143 ALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNI-ARFNQGYFGNCIP 202

Query: 244 TFVEEYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGK------TIPPPPRTE 286
            +VE  +D+  M WPGSFRQ    V          V+  +   G+       +      E
Sbjct: 203 FYVE--DDEAEMLWPGSFRQATNAV---------AVEAGNDNLGERKMDFLDVKQAMDME 260

[Close]

BLAST of Carg25252 vs. TAIR10
Match: AT1G24625.1 (zinc finger protein 7)

HSP 1 Score: 109.0 bits (271), Expect = 4.9e-24
Identity = 72/167 (43.11%), Postives = 90/167 (53.89%), Query Frame = 0


Query: 123 PRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGMFFDRYGSLASLPLHGSALR 182
           PRVFSCNYCRRKF+SSQALGGHQNAHKRERTMAKR   MG  F  +        +     
Sbjct: 56  PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHR-----PYTYTSS 115

Query: 183 SLGIEAH-GALHQTVLASDHRPYPGRSVGAKFEHSTF---GFPTFVEEYEDDVGMFWPGS 242
           SLG++AH G LH T+     +P P   + ++F H  +     P F +  +     FWPGS
Sbjct: 116 SLGMQAHSGLLHHTL----SQPQP---LVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGS 175

Query: 243 FRQVAAKVDSSLGPLKSTVQISDSEFGKTIPPPPRTEESSPDLTLRL 286
           FRQV  + ++ +  + ST    D               S PDLTLRL
Sbjct: 176 FRQVVEEAEAPVVVVASTESGLDLN-SVAANGGVDNNSSKPDLTLRL 209

[Close]

BLAST of Carg25252 vs. TAIR10
Match: AT1G80730.1 (zinc-finger protein 1)

HSP 1 Score: 91.7 bits (226), Expect = 8.1e-19
Identity = 49/89 (55.06%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 123 PRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGMFF---------------DR 182
           PRVFSCNYC+RKF+SSQALGGHQNAHKRERT+AKR     M                  R
Sbjct: 65  PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSR 124

Query: 183 YGSLASLPLHGSA--LRSLGIEAHGALHQ 195
           + S+ASLPLHGS     +LGI+AH  +H+
Sbjct: 125 FASMASLPLHGSVNNRSTLGIQAHSTIHK 153

[Close]

BLAST of Carg25252 vs. TAIR10
Match: AT5G25160.1 (zinc finger protein 3)

HSP 1 Score: 84.0 bits (206), Expect = 1.7e-16
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 124 RVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGMFFDRYG---SLASLPLHG-- 183
           ++FSCNYC+R F+SSQALGGHQNAHKRERT+AKR  RM      +G     + LP HG  
Sbjct: 59  KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQY 118

Query: 184 SALRSLGIEAHGALHQ 195
           +  RSLGI+AH   H+
Sbjct: 119 NNHRSLGIQAHSISHK 134

[Close]

BLAST of Carg25252 vs. TAIR10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 82.8 bits (203), Expect = 3.7e-16
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 124 RVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRM---GMFFDRYGSLASLPLHGS- 183
           ++FSCNYC+R F+SSQALGGHQNAHKRERT+AKR  RM     F   YG  A +P HG  
Sbjct: 102 KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYG-FAPVPFHGQY 161

Query: 184 ALRSLGIEAHGALHQ 195
           + R+LGI+AH   H+
Sbjct: 162 SNRTLGIQAHSMSHK 175

[Close]

BLAST of Carg25252 vs. Swiss-Prot
Match: sp|Q39263|ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-24
Identity = 79/190 (41.58%), Postives = 99/190 (52.11%), Query Frame = 0


Query: 124 RVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGM--FFDRYGS----------- 183
           RVFSCNYC+RKF+SSQALGGHQNAHKRERT+AKR  RMG+   F   GS           
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAA 142

Query: 184 -LASLPLHGS------ALRSLGIEAHGALHQTVLASDHRPYPGRSVGAKFEHSTFG--FP 243
            L+ LPLHGS      + R+LGI AH + H   +         R++ A+F    FG   P
Sbjct: 143 ALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNI-ARFNQGYFGNCIP 202

Query: 244 TFVEEYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGK------TIPPPPRTE 286
            +VE  +D+  M WPGSFRQ    V          V+  +   G+       +      E
Sbjct: 203 FYVE--DDEAEMLWPGSFRQATNAV---------AVEAGNDNLGERKMDFLDVKQAMDME 260

[Close]

BLAST of Carg25252 vs. Swiss-Prot
Match: sp|Q39266|ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 8.8e-23
Identity = 72/167 (43.11%), Postives = 90/167 (53.89%), Query Frame = 0


Query: 123 PRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGMFFDRYGSLASLPLHGSALR 182
           PRVFSCNYCRRKF+SSQALGGHQNAHKRERTMAKR   MG  F  +        +     
Sbjct: 56  PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHR-----PYTYTSS 115

Query: 183 SLGIEAH-GALHQTVLASDHRPYPGRSVGAKFEHSTF---GFPTFVEEYEDDVGMFWPGS 242
           SLG++AH G LH T+     +P P   + ++F H  +     P F +  +     FWPGS
Sbjct: 116 SLGMQAHSGLLHHTL----SQPQP---LVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGS 175

Query: 243 FRQVAAKVDSSLGPLKSTVQISDSEFGKTIPPPPRTEESSPDLTLRL 286
           FRQV  + ++ +  + ST    D               S PDLTLRL
Sbjct: 176 FRQVVEEAEAPVVVVASTESGLDLN-SVAANGGVDNNSSKPDLTLRL 209

[Close]

BLAST of Carg25252 vs. Swiss-Prot
Match: sp|Q42485|ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-17
Identity = 49/89 (55.06%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 123 PRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGMFF---------------DR 182
           PRVFSCNYC+RKF+SSQALGGHQNAHKRERT+AKR     M                  R
Sbjct: 65  PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSR 124

Query: 183 YGSLASLPLHGSA--LRSLGIEAHGALHQ 195
           + S+ASLPLHGS     +LGI+AH  +H+
Sbjct: 125 FASMASLPLHGSVNNRSTLGIQAHSTIHK 153

[Close]

BLAST of Carg25252 vs. Swiss-Prot
Match: sp|Q39262|ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.0e-15
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 124 RVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGMFFDRYG---SLASLPLHG-- 183
           ++FSCNYC+R F+SSQALGGHQNAHKRERT+AKR  RM      +G     + LP HG  
Sbjct: 59  KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQY 118

Query: 184 SALRSLGIEAHGALHQ 195
           +  RSLGI+AH   H+
Sbjct: 119 NNHRSLGIQAHSISHK 134

[Close]

BLAST of Carg25252 vs. Swiss-Prot
Match: sp|Q39261|ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.9e-11
Identity = 30/35 (85.71%), Postives = 34/35 (97.14%), Query Frame = 0


Query: 123 PRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKR 158
           PRVFSCNYC+RKF+SSQALGGHQNAHK ERT+AK+
Sbjct: 49  PRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKK 83

[Close]

BLAST of Carg25252 vs. TrEMBL
Match: tr|A0A1S3CTQ8|A0A1S3CTQ8_CUCME (zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103504366 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.1e-81
Identity = 177/253 (69.96%), Postives = 188/253 (74.31%), Query Frame = 0


Query: 33  METLDFNIEAAKDSEPSSSQEANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 92
           METL+ N+EAAKDSEPSSSQEANP       XXXXXXXXXXXX                 
Sbjct: 1   METLNLNLEAAKDSEPSSSQEANP----DHSXXXXXXXXXXXXLSKVVVADTSPLSLDLT 60

Query: 93  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRVFSCNYCRRKFFSSQALGGHQNAHKRER 152
                                         PRVFSCNYCRRKFFSSQALGGHQNAHKRER
Sbjct: 61  LQFNSNDIDSKGDGEINGETSSNKSPSSTIPRVFSCNYCRRKFFSSQALGGHQNAHKRER 120

Query: 153 TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDHRPYPGRSVGAK 212
           TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTV+ASD RPYPGRS+GAK
Sbjct: 121 TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVVASDQRPYPGRSIGAK 180

Query: 213 FEHSTFGFPTFVEEYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGKTIPPPP 272
           FE S+FGFPTF+E+Y+DDVGMFWPGSFRQVAAKVDSSLGPLK+ VQ S+ EFGKT+PPP 
Sbjct: 181 FEQSSFGFPTFIEDYDDDVGMFWPGSFRQVAAKVDSSLGPLKTPVQNSNPEFGKTMPPPR 240

Query: 273 RTEESSPDLTLRL 286
               SSPDLTLRL
Sbjct: 241 TGATSSPDLTLRL 249

[Close]

BLAST of Carg25252 vs. TrEMBL
Match: tr|A0A0A0KPA2|A0A0A0KPA2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G548160 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.0e-80
Identity = 164/253 (64.82%), Postives = 174/253 (68.77%), Query Frame = 0


Query: 33  METLDFNIEAAKDSEPSSSQEANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 92
           ME L+ N+EAAKDSEPSSSQ ANP                                    
Sbjct: 1   MEALNLNLEAAKDSEPSSSQAANP----DHSNTATTTSSCPPSLSKVVVVDTSPISLDLT 60

Query: 93  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRVFSCNYCRRKFFSSQALGGHQNAHKRER 152
                                         PRVFSCNYCRRKFFSSQALGGHQNAHKRER
Sbjct: 61  LQFNSNDIDSKGDGEINGETNSNKSSSSTVPRVFSCNYCRRKFFSSQALGGHQNAHKRER 120

Query: 153 TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDHRPYPGRSVGAK 212
           TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTV+ASD RPYPGRSVGAK
Sbjct: 121 TMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVVASDQRPYPGRSVGAK 180

Query: 213 FEHSTFGFPTFVEEYEDDVGMFWPGSFRQVAAKVDSSLGPLKSTVQISDSEFGKTIPPPP 272
           FE S+FGFPTF+E+Y+DDVGMFWPGSFRQVAAKVDS LGPLK+TVQ S+ EFGKT+PPP 
Sbjct: 181 FEQSSFGFPTFIEDYDDDVGMFWPGSFRQVAAKVDSGLGPLKTTVQNSNPEFGKTMPPPR 240

Query: 273 RTEESSPDLTLRL 286
               SSPDLTLRL
Sbjct: 241 TEAGSSPDLTLRL 249

[Close]

BLAST of Carg25252 vs. TrEMBL
Match: tr|A0A2P4HUD8|A0A2P4HUD8_QUESU (Zinc finger protein 4 OS=Quercus suber OX=58331 GN=CFP56_03513 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 3.1e-49
Identity = 113/164 (68.90%), Postives = 123/164 (75.00%), Query Frame = 0


Query: 123 PRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGMFFDRYGSLASLPLHGSALR 182
           PRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKR  RMGMF DRY SLASLPLHGSA R
Sbjct: 96  PRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFSDRYTSLASLPLHGSAFR 155

Query: 183 SLGIEAHGALHQTVLASDHRPYPGRSVGAKFEHSTFGFPTFVEEYEDDVGMFWPGSFRQV 242
           SLGIEAH A+HQ +L S+ RP  G   GA+FE   FG P FVE  +DDVG+FWPGSFRQV
Sbjct: 156 SLGIEAHAAMHQRILPSE-RPPRG---GARFEQGYFGVPMFVE--DDDVGLFWPGSFRQV 215

Query: 243 AAKVDSSLGPL-KSTVQISDSEFGKTIPPPPRTEESSPDLTLRL 286
           +  V +  G L     Q S+  F  T  PPPRT  SSPDLTL+L
Sbjct: 216 SEPVGAVGGNLAMELAQNSNMNFVMT-APPPRTTSSSPDLTLKL 252

[Close]

BLAST of Carg25252 vs. TrEMBL
Match: tr|A0A2N9HV26|A0A2N9HV26_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44054 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 4.1e-49
Identity = 111/164 (67.68%), Postives = 121/164 (73.78%), Query Frame = 0


Query: 123 PRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGMFFDRYGSLASLPLHGSALR 182
           PRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKR  RMGMF DRY SLASLPLHGSA R
Sbjct: 91  PRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFSDRYTSLASLPLHGSAFR 150

Query: 183 SLGIEAHGALHQTVLASDHRPYPGRSVGAKFEHSTFGFPTFVEEYEDDVGMFWPGSFRQV 242
           SLGIEAH A+HQ +L S+ RP  G   GA+FE   FG P F+E  EDDVG+FWPGSFRQV
Sbjct: 151 SLGIEAHAAMHQRMLPSE-RPPRG---GARFEQGYFGLPMFME--EDDVGLFWPGSFRQV 210

Query: 243 AAKVDSSLGPLK-STVQISDSEFGKTIPPPPRTEESSPDLTLRL 286
           +  V S  G +     Q  +  F  T PPP  T  SSPDLTL+L
Sbjct: 211 SEPVGSVGGNMPLELAQNPNMNFVMTAPPPRTTTSSSPDLTLKL 248

[Close]

BLAST of Carg25252 vs. TrEMBL
Match: tr|A0A2H5PHI8|A0A2H5PHI8_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_137250 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.2e-46
Identity = 103/163 (63.19%), Postives = 120/163 (73.62%), Query Frame = 0


Query: 123 PRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGMFFDRYGSLASLPLHGSALR 182
           PRVFSCNYCRRKF+SSQALGGHQNAHKRERTMAKR  RMG+F DRY SLASLPLHGSA R
Sbjct: 92  PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFR 151

Query: 183 SLGIEAHGALHQTVLASDHRPYPGRSVGAKFEHSTFGFPTFVEEYEDDVGMFWPGSFRQV 242
           SLGI+AH A+HQ V+    RP P    GA+FE   F  P F+E  +DD+ +FWPGSFRQV
Sbjct: 152 SLGIKAHAAMHQGVV-PPQRP-PDMRGGARFEQGYFAMPMFME--DDDIDLFWPGSFRQV 211

Query: 243 AAKVDSSLGPLKSTVQISDSEFGKTIPPPPRTEESSPDLTLRL 286
           +  V  +  P     Q S+  F   +PPPPRT+ S+PDLTL+L
Sbjct: 212 SEAVGGN--PTLDFAQGSNGNFA-AMPPPPRTDSSAPDLTLKL 247

The following BLAST results are available for this feature:

BLAST of Carg25252 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922104.1	2.0e-95	100.00	zinc finger protein 4-like [Cucurbita moschata]	[more]
XP_023521257.1	1.1e-93	99.21	zinc finger protein 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022991196.1	3.1e-93	98.42	zinc finger protein 7-like [Cucurbita maxima]	[more]
XP_008466973.1	4.7e-81	69.96	PREDICTED: zinc finger protein 7-like [Cucumis melo] >XP_008466976.1 PREDICTED: ...	[more]
KGN51450.1	3.0e-80	64.82	hypothetical protein Csa_5G548160 [Cucumis sativus]	[more]

BLAST of Carg25252 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G66140.1	8.9e-26	41.58	zinc finger protein 4	[more]
AT1G24625.1	4.9e-24	43.11	zinc finger protein 7	[more]
AT1G80730.1	8.1e-19	55.06	zinc-finger protein 1	[more]
AT5G25160.1	1.7e-16	56.58	zinc finger protein 3	[more]
AT5G10970.1	3.7e-16	58.67	C2H2 and C2HC zinc fingers superfamily protein	[more]

BLAST of Carg25252 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q39263\|ZFP4_ARATH	1.6e-24	41.58	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
sp\|Q39266\|ZFP7_ARATH	8.8e-23	43.11	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
sp\|Q42485\|ZFP1_ARATH	1.5e-17	55.06	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
sp\|Q39262\|ZFP3_ARATH	3.0e-15	56.58	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
sp\|Q39261\|ZFP2_ARATH	5.9e-11	85.71	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of Carg25252 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CTQ8\|A0A1S3CTQ8_CUCME	3.1e-81	69.96	zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103504366 PE=4 SV=1	[more]
tr\|A0A0A0KPA2\|A0A0A0KPA2_CUCSA	2.0e-80	64.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G548160 PE=4 SV=1	[more]
tr\|A0A2P4HUD8\|A0A2P4HUD8_QUESU	3.1e-49	68.90	Zinc finger protein 4 OS=Quercus suber OX=58331 GN=CFP56_03513 PE=4 SV=1	[more]
tr\|A0A2N9HV26\|A0A2N9HV26_FAGSY	4.1e-49	67.68	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44054 PE=4 SV=1	[more]
tr\|A0A2H5PHI8\|A0A2H5PHI8_CITUN	3.2e-46	63.19	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_137250 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036236	Znf_C2H2_sf
IPR013087	Znf_C2H2_type

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25252-RA	Carg25252-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.160.60		coord: 111..163 e-value: 3.1E-5 score: 25.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..285
None	No IPR available	PANTHER	PTHR26374	FAMILY NOT NAMED	coord: 37..285
None	No IPR available	PANTHER	PTHR26374:SF313	SUBFAMILY NOT NAMED	coord: 37..285
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 128..148
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 126..153 score: 11.302
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	SSF57667	beta-beta-alpha zinc fingers	coord: 124..154

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25252	Cla005809	Watermelon (97103) v1	carwmB0883
Carg25252	Csa5G548160	Cucumber (Chinese Long) v2	carcuB0895
Carg25252	MELO3C005248	Melon (DHL92) v3.5.1	carmeB0869
Carg25252	ClCG01G006720	Watermelon (Charleston Gray)	carwcgB0856
Carg25252	CSPI05G19080	Wild cucumber (PI 183967)	carcpiB0915
Carg25252	Cucsa.012010	Cucumber (Gy14) v1	carcgyB0999
Carg25252	CmaCh04G021450	Cucurbita maxima (Rimu)	carcmaB1220
Carg25252	CmoCh04G022370	Cucurbita moschata (Rifu)	carcmoB1189
Carg25252	Lsi09G007090	Bottle gourd (USVL1VR-Ls)	carlsiB799
Carg25252	Cp4.1LG00g04910	Cucurbita pepo (Zucchini)	carcpeB1226
Carg25252	CsGy5G018500	Cucumber (Gy14) v2	carcgybB0867
Carg25252	MELO3C005248.2	Melon (DHL92) v3.6.1	carmedB0878
Carg25252	CsaV3_5G027820	Cucumber (Chinese Long) v3	carcucB0919
Carg25252	Cla97C01G007050	Watermelon (97103) v2	carwmbB0919
Carg25252	Bhi12G000846	Wax gourd	carwgoB1027

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25252	Silver-seed gourd	carcarB624
Carg25252	Cucurbita maxima (Rimu)	carcmaB1219
Carg25252	Cucurbita moschata (Rifu)	carcmoB1188
Carg25252	Cucurbita pepo (Zucchini)	carcpeB1227
Carg25252	Cucurbita pepo (Zucchini)	carcpeB1228