ClCG01G006720 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGCCCCACTTCTTTGATTCTGCTCTGCTTTCTTTCTGGTGTTTTGTTTATGATGATGAGATGAAATCCCTGTCTTTCTGGGTAATTATTAATCCCTTGGAAGGGTTTTTTTTTTTGTTTGTTACTTTGAATTGTTACTGGGTTTTCCCCCCTTTGCATTACTGGGACTGCTGAGGCTAGTGATTGCGTGTTTTGCTCTTTCACTGAATGAATCTGCTTCCATGGTACTTGATGTTGCGGCCTTGTGCTTGCTCAGTTACTGCTTTTCGTGTGTGAGTTTATGGTTGGTATGTTAGTTTAGATTATAAAAAAGAAGTTTCTATAAATCTAGGTTTGTGTAGAGACTTGTAAATTCGTAGTTTGGGACAAACAAATTCATATACCAATCCTAAGTTTATCCTAAGTTTGGCTTGTTGATCTCAATTTATTGGAACTCAATCCCTGAATCAAAGACTGGTAGAGTTTATTTTTGGCTTCATACCTATTCCTTGTTCTTCATTAGTTCAAATTCAAAGGTATTTATAGTAGAAAAAACTGTAGAGGTATTGAGAGTTGTGGCTTTTACATGGATCCATAGCAAAAGACCGATCAAGTATTTGACTTTTTTCTTAAATGAAAAAGAAAAAATCATGATAAACTTGTGTTTATTATATGCTATAGCCCATTAGTTTAAACTCTTTTAGGTTGAGGGGTGATTGAACATGTCTTTAAAGCTTGAGATCATAATTCTAAACTACTTCAGTATCACTTCCTTCCCATTTCTTTTGAGTAGTTCGTATATTGAGCCTCTTAAATCCAATTGTTTCCAAGTTAACATGTGAGAGGAAATGTTGCATTTACCAAATGATTAAATTTAAGAAAAAATTCTTGTTCTTTTTTATCCCTATACTTAACTCATTGAGTCCATGTTGACATTGAATTTTAAATTTTGTCAAATTTAGCCTTGAACTTGATTACATGATGAAATTGATCCTCTCGATTAGTTAAGATTTCTTTTTTCTTTTTCTTCTTTTAAGATTTAGACTATCTCTATAGGTGTTCTTGTGACTAGACGAGATCGTTTTTGTCTATATTTATCTTTTGGTTGTGGTAGATACTTTGATTGGGTTTTGGATATTTTGTTGTTGAACCTCACACACTTCTACTTGATTTTCTGGTAAGGTACAACTTACAAGTATCTTTTTATTTTTTGGAGGGGGTGTTCAGTATTTTGGTGGTTTGATTTTGAGTGTTTTGTGAGTTCAATCTTGTTTGGTTTATTGATTGGTTCATAGACAAGGTTCTTTAGTTTTGAGAAAGTGTTAATATCACCTCTAAATCAAGTTAGAGGGTTAGGGTTCAATCACAATTATAAACATAAAAATTGACCCACTAAGCATAGGAGGTAATATGAAACTATCTTTTAAATGTATCCTATTTGATCAATTTAAGCTTTTGGACCTATTGGTGATTTTATTAATGTTTCATTATCATTTAAGATATAAAGAAATAAGTTGTTCCAAAGATAGAAGATATGAATAGCATTGGCACTTCTTTGGATTTTCTTTCCCATTATTATGCAATGCAGGTCAAGAGCCTGATAACTGGAAGCAACATTAATTTATATGATTGTTTTTGTGATTTTGAACACAGAAGGAAGAAGAGTGATTCTTTGTTTTGGAAGCCTCTGGTTCTTTACTTTCACCACTGTTCATCCAAATATGGAAGCTTTAAATTTAAACCTTGCAAAAGATTCAGAGCCGAGCAGCAGTCAAGAAGCAAATCCTGATCGTTCCAACGCTGCCGCTACCACTTCGTCCTGTCCACCAAGCTCGAGCAAAGTAGTCGTTGCCGATACATTGCCCATTTCACTTGACTTGACACTTCAGTTTAACTCCAATGATATCGATTCAAAGGGCGAAGGCGAGATTCAAGGGGAAACAAGTAGTAACAAATCATCATCTTCAGCAATGCCAAGAGTTTTCTCATGCAATTACTGTCGACGCAAATTCTTTAGCTCACAGGCGCTTGGTGGGCATCAAAATGCACACAAAAGAGAAAGGACAATGGCTAAACGTGTCACTCGGATGGGAATGTTCTTTGACAGATATGGTAGCTTGGCTTCTCTGCCACTTCATGGCTCAGCTCTTAGATCCCTTGGCATTGAAGCTCATGGTGCTCTACACCAAACAGTTCTAGCTTCAGATCAGAGGCCTTATCCTGGTAGGAGTGTCGGAGCAAAGTTCGAGCAGAGCTCTTTTGGGTTCCCGACGTTCATCGACGACTACGATGACGATGTGGGGATGTTTTGGCCAGGAAGTTTCAGGCAGGTAGCTGCCAAAGTTGATAGCAGCTTAGGTCCTTTGAAAACCACAGTTCAAAATTCAAATCCAGAGTTTGGGAAAACAATGCCTCCACCAAGAACAGAAACATCATCACCTGATCTCACTTTGAGGCTTTAGTAAGTAATTTTCTCTTTGATGCCTTCTCCTTCATGTATCAACTTTTGTAAAGTGGGATGATGTCTGCCATTGTCTGCCATCTTTTAGTGGCTCTAAG ATGTTGCCCCACTTCTTTGATTCTGCTCTGCTTTCTTTCTGGTGTTTTGTTTATGATGATGAGATGAAATCCCTGTCTTTCTGGACTATCTCTATAGGTGTTCTTGTGACTAGACGAGATCAAGGAAGAAGAGTGATTCTTTGTTTTGGAAGCCTCTGGTTCTTTACTTTCACCACTGTTCATCCAAATATGGAAGCTTTAAATTTAAACCTTGCAAAAGATTCAGAGCCGAGCAGCAGTCAAGAAGCAAATCCTGATCGTTCCAACGCTGCCGCTACCACTTCGTCCTGTCCACCAAGCTCGAGCAAAGTAGTCGTTGCCGATACATTGCCCATTTCACTTGACTTGACACTTCAGTTTAACTCCAATGATATCGATTCAAAGGGCGAAGGCGAGATTCAAGGGGAAACAAGTAGTAACAAATCATCATCTTCAGCAATGCCAAGAGTTTTCTCATGCAATTACTGTCGACGCAAATTCTTTAGCTCACAGGCGCTTGGTGGGCATCAAAATGCACACAAAAGAGAAAGGACAATGGCTAAACGTGTCACTCGGATGGGAATGTTCTTTGACAGATATGGTAGCTTGGCTTCTCTGCCACTTCATGGCTCAGCTCTTAGATCCCTTGGCATTGAAGCTCATGGTGCTCTACACCAAACAGTTCTAGCTTCAGATCAGAGGCCTTATCCTGGTAGGAGTGTCGGAGCAAAGTTCGAGCAGAGCTCTTTTGGGTTCCCGACGTTCATCGACGACTACGATGACGATGTGGGGATGTTTTGGCCAGGAAGTTTCAGGCAGGTAGCTGCCAAAGTTGATAGCAGCTTAGGTCCTTTGAAAACCACAGTTCAAAATTCAAATCCAGAGTTTGGGAAAACAATGCCTCCACCAAGAACAGAAACATCATCACCTGATCTCACTTTGAGGCTTTAGTAAGTAATTTTCTCTTTGATGCCTTCTCCTTCATGTATCAACTTTTGTAAAGTGGGATGATGTCTGCCATTGTCTGCCATCTTTTAGTGGCTCTAAG ATGTTGCCCCACTTCTTTGATTCTGCTCTGCTTTCTTTCTGGTGTTTTGTTTATGATGATGAGATGAAATCCCTGTCTTTCTGGACTATCTCTATAGGTGTTCTTGTGACTAGACGAGATCAAGGAAGAAGAGTGATTCTTTGTTTTGGAAGCCTCTGGTTCTTTACTTTCACCACTGTTCATCCAAATATGGAAGCTTTAAATTTAAACCTTGCAAAAGATTCAGAGCCGAGCAGCAGTCAAGAAGCAAATCCTGATCGTTCCAACGCTGCCGCTACCACTTCGTCCTGTCCACCAAGCTCGAGCAAAGTAGTCGTTGCCGATACATTGCCCATTTCACTTGACTTGACACTTCAGTTTAACTCCAATGATATCGATTCAAAGGGCGAAGGCGAGATTCAAGGGGAAACAAGTAGTAACAAATCATCATCTTCAGCAATGCCAAGAGTTTTCTCATGCAATTACTGTCGACGCAAATTCTTTAGCTCACAGGCGCTTGGTGGGCATCAAAATGCACACAAAAGAGAAAGGACAATGGCTAAACGTGTCACTCGGATGGGAATGTTCTTTGACAGATATGGTAGCTTGGCTTCTCTGCCACTTCATGGCTCAGCTCTTAGATCCCTTGGCATTGAAGCTCATGGTGCTCTACACCAAACAGTTCTAGCTTCAGATCAGAGGCCTTATCCTGGTAGGAGTGTCGGAGCAAAGTTCGAGCAGAGCTCTTTTGGGTTCCCGACGTTCATCGACGACTACGATGACGATGTGGGGATGTTTTGGCCAGGAAGTTTCAGGCAGGTAGCTGCCAAAGTTGATAGCAGCTTAGGTCCTTTGAAAACCACAGTTCAAAATTCAAATCCAGAGTTTGGGAAAACAATGCCTCCACCAAGAACAGAAACATCATCACCTGATCTCACTTTGAGGCTTTAG MLPHFFDSALLSFWCFVYDDEMKSLSFWTISIGVLVTRRDQGRRVILCFGSLWFFTFTTVHPNMEALNLNLAKDSEPSSSQEANPDRSNAAATTSSCPPSSSKVVVADTLPISLDLTLQFNSNDIDSKGEGEIQGETSSNKSSSSAMPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMGMFFDRYGSLASLPLHGSALRSLGIEAHGALHQTVLASDQRPYPGRSVGAKFEQSSFGFPTFIDDYDDDVGMFWPGSFRQVAAKVDSSLGPLKTTVQNSNPEFGKTMPPPRTETSSPDLTLRL
BLAST of ClCG01G006720 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2) HSP 1 Score: 136.7 bits (343), Expect = 4.2e-31 Identity = 98/254 (38.58%), Postives = 132/254 (51.97%), Query Frame = 1
BLAST of ClCG01G006720 vs. Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.4e-26 Identity = 84/201 (41.79%), Postives = 101/201 (50.25%), Query Frame = 1
BLAST of ClCG01G006720 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 4.8e-19 Identity = 78/214 (36.45%), Postives = 98/214 (45.79%), Query Frame = 1
BLAST of ClCG01G006720 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.5e-17 Identity = 46/85 (54.12%), Postives = 57/85 (67.06%), Query Frame = 1
BLAST of ClCG01G006720 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.0e-13 Identity = 39/71 (54.93%), Postives = 48/71 (67.61%), Query Frame = 1
BLAST of ClCG01G006720 vs. TrEMBL
Match: A0A0A0KPA2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G548160 PE=4 SV=1) HSP 1 Score: 457.2 bits (1175), Expect = 1.6e-125 Identity = 230/249 (92.37%), Postives = 235/249 (94.38%), Query Frame = 1
BLAST of ClCG01G006720 vs. TrEMBL
Match: A0A067F403_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047746mg PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 1.9e-62 Identity = 140/248 (56.45%), Postives = 168/248 (67.74%), Query Frame = 1
BLAST of ClCG01G006720 vs. TrEMBL
Match: V4UB17_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016402mg PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 1.9e-62 Identity = 140/248 (56.45%), Postives = 168/248 (67.74%), Query Frame = 1
BLAST of ClCG01G006720 vs. TrEMBL
Match: M5XEY3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010190mg PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 2.1e-61 Identity = 145/264 (54.92%), Postives = 174/264 (65.91%), Query Frame = 1
BLAST of ClCG01G006720 vs. TrEMBL
Match: A0A061E8M6_THECC (Zinc finger protein 4 OS=Theobroma cacao GN=TCM_011244 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 2.7e-61 Identity = 138/256 (53.91%), Postives = 175/256 (68.36%), Query Frame = 1
BLAST of ClCG01G006720 vs. TAIR10
Match: AT1G66140.1 (AT1G66140.1 zinc finger protein 4) HSP 1 Score: 136.7 bits (343), Expect = 2.4e-32 Identity = 98/254 (38.58%), Postives = 132/254 (51.97%), Query Frame = 1
BLAST of ClCG01G006720 vs. TAIR10
Match: AT1G24625.1 (AT1G24625.1 zinc finger protein 7) HSP 1 Score: 121.7 bits (304), Expect = 7.9e-28 Identity = 84/201 (41.79%), Postives = 101/201 (50.25%), Query Frame = 1
BLAST of ClCG01G006720 vs. TAIR10
Match: AT1G80730.1 (AT1G80730.1 zinc-finger protein 1) HSP 1 Score: 96.7 bits (239), Expect = 2.7e-20 Identity = 78/214 (36.45%), Postives = 98/214 (45.79%), Query Frame = 1
BLAST of ClCG01G006720 vs. TAIR10
Match: AT5G25160.1 (AT5G25160.1 zinc finger protein 3) HSP 1 Score: 90.5 bits (223), Expect = 1.9e-18 Identity = 46/85 (54.12%), Postives = 57/85 (67.06%), Query Frame = 1
BLAST of ClCG01G006720 vs. TAIR10
Match: AT5G10970.1 (AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein) HSP 1 Score: 88.2 bits (217), Expect = 9.7e-18 Identity = 48/87 (55.17%), Postives = 57/87 (65.52%), Query Frame = 1
BLAST of ClCG01G006720 vs. NCBI nr
Match: gi|700196273|gb|KGN51450.1| (hypothetical protein Csa_5G548160 [Cucumis sativus]) HSP 1 Score: 457.2 bits (1175), Expect = 2.2e-125 Identity = 230/249 (92.37%), Postives = 235/249 (94.38%), Query Frame = 1
BLAST of ClCG01G006720 vs. NCBI nr
Match: gi|778703870|ref|XP_004142819.2| (PREDICTED: zinc finger protein 7 [Cucumis sativus]) HSP 1 Score: 457.2 bits (1175), Expect = 2.2e-125 Identity = 230/249 (92.37%), Postives = 235/249 (94.38%), Query Frame = 1
BLAST of ClCG01G006720 vs. NCBI nr
Match: gi|659072747|ref|XP_008466973.1| (PREDICTED: zinc finger protein 7-like [Cucumis melo]) HSP 1 Score: 453.4 bits (1165), Expect = 3.2e-124 Identity = 228/249 (91.57%), Postives = 234/249 (93.98%), Query Frame = 1
BLAST of ClCG01G006720 vs. NCBI nr
Match: gi|567911571|ref|XP_006448099.1| (hypothetical protein CICLE_v10016402mg [Citrus clementina]) HSP 1 Score: 247.7 bits (631), Expect = 2.7e-62 Identity = 140/248 (56.45%), Postives = 168/248 (67.74%), Query Frame = 1
BLAST of ClCG01G006720 vs. NCBI nr
Match: gi|596190899|ref|XP_007223488.1| (hypothetical protein PRUPE_ppa010190mg [Prunus persica]) HSP 1 Score: 244.2 bits (622), Expect = 3.0e-61 Identity = 145/264 (54.92%), Postives = 174/264 (65.91%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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