Cla004793 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla004793
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	EP300-interacting inhibitor of differentiation 3 (AHRD V1 **-- EID3_MOUSE); contains Interpro domain(s) IPR014854 Nse4
Location	Chr3 : 24091147 .. 24093582 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCCTGTCAAACGAGAACCCACCTCCAGCAGCCGCAGTAATCGGAGTAGAGGCGGAGGCGATGACGGCGCTGTCGATGCTGCGAGTTTAAGGGATATTAAGCGGGAGAGGGTTGCTCGGGTGCGAGAGAACTCCGGCGAAGACAATACGACTGAAGAAGAAGTGGGTCAGCAAGACTTGACAAAACGGCGGGTCCTTCGCTCTCGGTATCTCGCTGTCATTCATGAGATTAGTGGTATGATGAATCTTTGCATTTTTTGAATACTGCTGGATTTTGAGATGTGGGTTTGATTTGTTTTTGTGTGTAATCGGTTTTTCTTTGTTTCTTGACTTTGAAGAAAGAAGAGAGGATTTGTCGAAGGATCTGGATAAGTTTAATGTTATCATCAATGAGGTGGAAAAGTTGCACGAGCAAGGTATTTCTGTAGTCTTTTCTTATTGCTGTCTTCATTGTAGAATTGTTGTCTCTATTATTTAAAATTTCCACCAAAGGAAAGCGTGCATCTTTGCCCTTTACCTCCGCATTCTTACATTCATACAAGTTTGTATGTCAATTTGAATATTCGTTGTTACTTTTCCCTTTGATATTGTCATCTATGTGACATGGTTGTGTTTTCATTTGGGTTTCAGTTCAAAAGCCAAGGGAACAAGTTGCAGATGCAGAAGCGTTGCAAGATATTGCAAACTCCCTCGTGACCTCTATTAGGTCTCAGTCAAATGAAGGTGTTACTCCATCAGATTTTGTCAGTTGTCTGCTCAGAGAGTTTGCTGACATTAACGTTAGTATGCAATCTGAAGAACAAGACCTGGTTTCTGTCAGTTGGAAAGATATTGGACTCAGTGTTTCGTCTATTTTCATGAATGGCCATGGATGCCGCACAATGTGAGATTTATGGATTCCTTTTTCCCACTATCCTGATGCTGAAGTGTCTTTAATTGATGTTTTTAGTCAATTATATAACTTTCTTTGTTGTGTGTGTGTGTGTGTGTTTTTTTTTCAAGGCTTGGACCTATGAGCAATCAGTTGAAGCAGCGAAAGACTAATAATATTTCCAGGAAACGTTCCAGGCCTACTGAAAGTTCTAGACCTGCAGAGGTTAGATCAAAAAGATTTTGATATTTTGAAGTATTTTGGTTTTAGGATTGAGTCATCTGTCTCTCTGTTCTGAGCTTTTGTTATTCTGTTGCTTTGACCTGATAAAGGCCTTGCTTTAAAAATTCCTAGTGCGGTCAACTTTTTCAGCACTCTATTACTTTGGAGGTTAACACCAGTACAGTTATTTCTTTCTTGGCCGGACTTACATCATTGAACTTTCTAATGTTTCAGCTGGACCTTAACAAAGTTTAAGGCTTGCTTGCAAGTTTGTTTTGAGTCACTCCTCAAGGCTTGCTTGCAAGTGTGTTTGGAGTCACTCCTCAAGGCTTGACATGATGTTCTTCGTTTAATATCTATTACATTTTTCTTTTGCTGAAGTGGTTTGTGAAATAGATTGCACTTTCTGTTTGTTTCTTATGAATTTGGCATGCTATTATCCCCTTGATGTTTGTTCCAATTCATACGTGCAGGTTGAAGATAATGGGTCCGAAGTAAAAACAGATACAGATAAGAACATGGGCATCATGTTTGGAATTTTGAGGAGGAATAAAACCGTTAAACTTGAACACTTGATATTGAATAGAAAGTCTTTTGCACAGACAGTAGAGAATTTATTTGCTCTGTCCTTTCTGGTTAAGGATGGTCGGGCTGAGATAACTATTGATAAAAATGGTTCTCACTTTGTGTGTGAGTAAACATCTACAAACTAAACGTTTTATGCTTTTGTTTGAAAGTATTTTGTTGTTTGCATTATGCTAACATTTTCTGCCAACGTTTTCAGCACCGAAGAATGCCCCTGCCCATAGTACCATTATGTCACATGAAGTTAATTACAGTCATTTTGTATTCAGATTCGATTACAAGGATTGGAAGGTACGGAGAAGCATTCATTTTTACGATAGTAACTTTGCATTTTGCGGTGTCTTGTAAAACAGATTTCAAATATTAAGAAAAATATTCTACCCTCTTGATTAGAGCGTATACAATATTGGATAGAGTCTCATGATATATACAAAATGCTGTGTGCTACCTAGATCCTTGCATCCAATTGAAGAACACATACTTGTGATGTTTATTTGCAGCCAATGGTGGATATGGTACCAGTTGGAGAGGAGCTGATGCCCCACAGGAACATTCTGAACTCAGAGCAGGTGTCCCAAGCAGAAGCAACGGCGGATGATTCTGAAGCGGCAGCCTTACCGACTACACCAATCCGAAAGCTGTCAAGAAATCGAGGTTTAGTTATCCAAACCGTTGTTGAAGATTCTCCTGATAATGGTTCTCATTCAGGTGCGACTGCAATTTTGAGGTGCAAGAGAAAGCTTAGTCAAGGTTAG

mRNA sequence

ATGAGGCCTGTCAAACGAGAACCCACCTCCAGCAGCCGCAGTAATCGGAGTAGAGGCGGAGGCGATGACGGCGCTGTCGATGCTGCGAGTTTAAGGGATATTAAGCGGGAGAGGGTTGCTCGGGTGCGAGAGAACTCCGGCGAAGACAATACGACTGAAGAAGAAGTGGGTCAGCAAGACTTGACAAAACGGCGGGTCCTTCGCTCTCGGTATCTCGCTGTCATTCATGAGATTAGTGAAAGAAGAGAGGATTTGTCGAAGGATCTGGATAAGTTTAATGTTATCATCAATGAGGTGGAAAAGTTGCACGAGCAAGTTCAAAAGCCAAGGGAACAAGTTGCAGATGCAGAAGCGTTGCAAGATATTGCAAACTCCCTCGTGACCTCTATTAGGTCTCAGTCAAATGAAGGTGTTACTCCATCAGATTTTGTCAGTTGTCTGCTCAGAGAGTTTGCTGACATTAACGTTAGTATGCAATCTGAAGAACAAGACCTGGTTTCTGTCAGTTGGAAAGATATTGGACTCAGTGTTTCGTCTATTTTCATGAATGGCCATGGATGCCGCACAATGCTTGGACCTATGAGCAATCAGTTGAAGCAGCGAAAGACTAATAATATTTCCAGGAAACGTTCCAGGCCTACTGAAAGTTCTAGACCTGCAGAGGTTGAAGATAATGGGTCCGAAGTAAAAACAGATACAGATAAGAACATGGGCATCATGTTTGGAATTTTGAGGAGGAATAAAACCGTTAAACTTGAACACTTGATATTGAATAGAAAGTCTTTTGCACAGACAGTAGAGAATTTATTTGCTCTGTCCTTTCTGGTTAAGGATGGTCGGGCTGAGATAACTATTGATAAAAATGGTTCTCACTTTGTGTCACCGAAGAATGCCCCTGCCCATAGTACCATTATGTCACATGAAGTTAATTACAGTCATTTTGTATTCAGATTCGATTACAAGGATTGGAAGCCAATGGTGGATATGGTACCAGTTGGAGAGGAGCTGATGCCCCACAGGAACATTCTGAACTCAGAGCAGGTGTCCCAAGCAGAAGCAACGGCGGATGATTCTGAAGCGGCAGCCTTACCGACTACACCAATCCGAAAGCTGTCAAGAAATCGAGGTTTAGTTATCCAAACCGTTGTTGAAGATTCTCCTGATAATGGTTCTCATTCAGGTGCGACTGCAATTTTGAGGTGCAAGAGAAAGCTTAGTCAAGGTTAG

Coding sequence (CDS)

ATGAGGCCTGTCAAACGAGAACCCACCTCCAGCAGCCGCAGTAATCGGAGTAGAGGCGGAGGCGATGACGGCGCTGTCGATGCTGCGAGTTTAAGGGATATTAAGCGGGAGAGGGTTGCTCGGGTGCGAGAGAACTCCGGCGAAGACAATACGACTGAAGAAGAAGTGGGTCAGCAAGACTTGACAAAACGGCGGGTCCTTCGCTCTCGGTATCTCGCTGTCATTCATGAGATTAGTGAAAGAAGAGAGGATTTGTCGAAGGATCTGGATAAGTTTAATGTTATCATCAATGAGGTGGAAAAGTTGCACGAGCAAGTTCAAAAGCCAAGGGAACAAGTTGCAGATGCAGAAGCGTTGCAAGATATTGCAAACTCCCTCGTGACCTCTATTAGGTCTCAGTCAAATGAAGGTGTTACTCCATCAGATTTTGTCAGTTGTCTGCTCAGAGAGTTTGCTGACATTAACGTTAGTATGCAATCTGAAGAACAAGACCTGGTTTCTGTCAGTTGGAAAGATATTGGACTCAGTGTTTCGTCTATTTTCATGAATGGCCATGGATGCCGCACAATGCTTGGACCTATGAGCAATCAGTTGAAGCAGCGAAAGACTAATAATATTTCCAGGAAACGTTCCAGGCCTACTGAAAGTTCTAGACCTGCAGAGGTTGAAGATAATGGGTCCGAAGTAAAAACAGATACAGATAAGAACATGGGCATCATGTTTGGAATTTTGAGGAGGAATAAAACCGTTAAACTTGAACACTTGATATTGAATAGAAAGTCTTTTGCACAGACAGTAGAGAATTTATTTGCTCTGTCCTTTCTGGTTAAGGATGGTCGGGCTGAGATAACTATTGATAAAAATGGTTCTCACTTTGTGTCACCGAAGAATGCCCCTGCCCATAGTACCATTATGTCACATGAAGTTAATTACAGTCATTTTGTATTCAGATTCGATTACAAGGATTGGAAGCCAATGGTGGATATGGTACCAGTTGGAGAGGAGCTGATGCCCCACAGGAACATTCTGAACTCAGAGCAGGTGTCCCAAGCAGAAGCAACGGCGGATGATTCTGAAGCGGCAGCCTTACCGACTACACCAATCCGAAAGCTGTCAAGAAATCGAGGTTTAGTTATCCAAACCGTTGTTGAAGATTCTCCTGATAATGGTTCTCATTCAGGTGCGACTGCAATTTTGAGGTGCAAGAGAAAGCTTAGTCAAGGTTAG

Protein sequence

MRPVKREPTSSSRSNRSRGGGDDGAVDAASLRDIKRERVARVRENSGEDNTTEEEVGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATADDSEAAALPTTPIRKLSRNRGLVIQTVVEDSPDNGSHSGATAILRCKRKLSQG

Homology

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BLAST of Cla004793 vs. Swiss-Prot
Match: NSE4A_ARATH (Non-structural maintenance of chromosomes element 4 homolog A OS=Arabidopsis thaliana GN=NSE4A PE=2 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 9.9e-105
Identity = 207/399 (51.88%), Postives = 275/399 (68.92%), Query Frame = 1


Query: 13  RSNRSRGGGDDGAVDAASLRDIKRERVARVRENSGE-DNTTEEEVGQQDLTKRRVLRSRY 72
           R + + GG  +   +   LR +K+E+  +   +S   D     +  +Q ++ RR+LRS+Y
Sbjct: 7   RESEATGGKREADDEPEKLRSVKKEKQRKTEADSVRPDEPPPPQEEEQGISDRRILRSKY 66

Query: 73  LAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANSLVTSI 132
           L++ +EI++ ++DL K D DKF+ IIN VE LH+QV+KPREQ+ADAEAL DIAN+L++S+
Sbjct: 67  LSLQNEINDCKDDLMKIDSDKFSRIINAVENLHQQVRKPREQIADAEALLDIANTLMSSV 126

Query: 133 RSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVSSIFMNGHGCRTM 192
           +SQS  GV+P++FV+ L+  F   ++ + ++E   VS+ WKD+G +V S  +   GC TM
Sbjct: 127 KSQSAHGVSPAEFVNALISGFGQGSLGIDTDETAQVSLKWKDLGFAVCSTVLVSCGCSTM 186

Query: 193 LGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILRRNKTV 252
           LGPM  +LKQRK    +RKR++P E  RP EV+D+ SE KTDTDKNM IMF IL + K V
Sbjct: 187 LGPMDTELKQRKRAP-NRKRTKPGEGVRPDEVDDSQSEEKTDTDKNMTIMFNILGKKKRV 246

Query: 253 KLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIMSHEVN 312
           +LE+L+LNR+SFAQTVENLFALSFL KDGR EI +DK+GSHF  P+NAP  + +MS EV 
Sbjct: 247 QLENLVLNRRSFAQTVENLFALSFLAKDGRVEIIVDKSGSHFAMPRNAPDANVVMSGEVI 306

Query: 313 YSHFVFRFDYKDWKPMVDMVPVGEELMPHR-NILNSEQVSQAEATADDSEAAALPTTPIR 372
           Y+HFVFR D+KDWK M +MVP+GEELMPHR   + S     A A A         TTPIR
Sbjct: 307 YNHFVFRLDFKDWKLMSEMVPLGEELMPHRQTAVASSSCPAASAPASADFTQDTQTTPIR 366

Query: 373 KLSRNRGLVIQ--TVVEDSPDNGSHSGATAILRCKRKLS 407
           KLSRNRGLV+Q  TVVED+PD     G     RCKR+L+
Sbjct: 367 KLSRNRGLVVQEETVVEDTPDK---EGDGTRRRCKRRLT 401

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BLAST of Cla004793 vs. Swiss-Prot
Match: NSE4B_ARATH (Non-structural maintenance of chromosomes element 4 homolog B OS=Arabidopsis thaliana GN=NSE4B PE=2 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.5e-92
Identity = 186/390 (47.69%), Postives = 255/390 (65.38%), Query Frame = 1


Query: 1   MRPVKREPTSSSRSNRSRGGGDDGAVDAASLRDIKRERVARVRENSGEDNTTEEEVGQQD 60
           MR   +  T  +     R   D+ +     ++  KR +         +    EEE  +Q 
Sbjct: 1   MRNSVKWETELTGDRSRRREADESSETPKIVKKEKRSKTVIASLRPQQPPIQEEE--EQG 60

Query: 61  LTKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAEAL 120
           +  RR +RS+YLA+ H+I + ++DL+K D +KFN IINEVE LH++V+KPREQ+ADAEAL
Sbjct: 61  IADRRAIRSQYLALTHKIKDAKDDLTKIDSNKFNSIINEVENLHQKVRKPREQIADAEAL 120

Query: 121 QDIANSLVTSIRSQS-NEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVS 180
            D+ NS+V+S++SQS + GV+P++FV+ L+  F   ++ + ++E   VS+ WKD+G +V 
Sbjct: 121 LDLTNSVVSSVKSQSAHGGVSPAEFVNALINGFGKTSLRIDADENTQVSMKWKDLGFTVC 180

Query: 181 SIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMG 240
           S  +   GC TM+GPM +++KQRK+   +RKR++P    +P EV+D  +E K+DTD NM 
Sbjct: 181 STVLVSCGCTTMMGPMYSEMKQRKSRVGNRKRTKPGAGVKPEEVDDTEAEKKSDTDNNMA 240

Query: 241 IMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNA 300
           +MF ILR+NK VK+E+L+LNRKSFAQT EN+FALSFLVKDGR EIT+D NGSHFV P+NA
Sbjct: 241 VMFNILRKNKRVKIENLVLNRKSFAQTAENMFALSFLVKDGRVEITVDNNGSHFVEPRNA 300

Query: 301 PAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATADDS 360
           PA + ++S EV Y+HFV RFDYKDW+PM  MV VGEELMP R         + +   D  
Sbjct: 301 PAANLVLSGEVAYNHFVLRFDYKDWEPMSKMVAVGEELMPLR---------ETKVAQDSI 360

Query: 361 EAAALPTTPIRKLSRNRGLVIQ--TVVEDS 387
           E           LSR +G VIQ  TVVEDS
Sbjct: 361 E-----------LSRKQGSVIQEETVVEDS 368

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BLAST of Cla004793 vs. Swiss-Prot
Match: NSE4A_BOVIN (Non-structural maintenance of chromosomes element 4 homolog A OS=Bos taurus GN=NSMCE4A PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 6.6e-16
Identity = 83/378 (21.96%), Postives = 148/378 (39.15%), Query Frame = 1


Query: 10  SSSRSNRSRGGGDDGAVDAASLRDIKRERVA------------RVRENSGEDNTTEEEVG 69
           SS R    RG G D   D    R   R  ++               E  G ++T   + G
Sbjct: 5   SSGRRPEGRGRGRDPHRDRTRSRSRSRSPLSPGSRRGAAPERREAPERPGLEDTEPSDSG 64

Query: 70  QQ-----------DLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQV 129
            +           D +  R +R +Y A+I+ + + RED+    DK   ++ E   L   V
Sbjct: 65  DEMIDPASLEEETDPSLCRQIRHQYRALINSVQQNREDILNASDKLTEVLEEANTLFNGV 124

Query: 130 QKPREQVADAEAL---QDIANSLVTSIRSQSNE--------------GVTPSDFVSCLLR 189
            + RE V DA  L    D+       +RS  N               GV P +    +  
Sbjct: 125 SRAREAVLDAHFLVLASDLGKEKAKQLRSDLNSFDMLRYVETLLTHMGVNPLEAEELIRD 184

Query: 190 EFADINVSMQSEEQDLVSVSWKDIGLSVSSIFMNGHGCRTMLGPMSNQL--------KQR 249
           E +       S+ + +V  SWK  G +  + F   H    +LG +  +         + R
Sbjct: 185 EDS-------SDLEFIVYDSWKISGKTAENTFNKTHTFHFLLGSIQGECPVPKPRIERPR 244

Query: 250 KTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILRRNKTVKLE--HLILNR 309
           K   I  +++ P +  R  E     +E   + ++ +G++    + +    +     +++ 
Sbjct: 245 KVRMIEEQQAMPAQLKRMEESHQEATE--KEVERILGLLQTYFQEDPDTPMSFFDFVVDP 304

Query: 310 KSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIMSHEVNYSHFVFRFD 338
            SF +TVEN+F +SF+++DG A I +D++    + P N    S   +   N +  +    
Sbjct: 305 HSFPRTVENIFHVSFIIRDGFARIRLDRDRLPVIEPVNINEESGGNTQIRNQA--IIALS 364

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BLAST of Cla004793 vs. Swiss-Prot
Match: NSE4A_HUMAN (Non-structural maintenance of chromosomes element 4 homolog A OS=Homo sapiens GN=NSMCE4A PE=1 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 8.6e-16
Identity = 84/373 (22.52%), Postives = 151/373 (40.48%), Query Frame = 1


Query: 10  SSSRSNRSRGGGDDGAVDAASLRDIKRERV--------ARVRENSGE----DNTTEEEVG 69
           SS R    RG G D   D    R   R  +        AR R  + E    ++T   + G
Sbjct: 5   SSGRGPEGRGRGRDPHRDRTRSRSRSRSPLSPRSRRGSARERREAPERPSLEDTEPSDSG 64

Query: 70  QQ-----------DLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQV 129
            +           D    R +R +Y A+I+ + + RED+    DK   ++ E   L  +V
Sbjct: 65  DEMMDPASLEAEADQGLCRQIRHQYRALINSVQQNREDILNAGDKLTEVLEEANTLFNEV 124

Query: 130 QKPREQVADAEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINVS-MQSEE--- 189
            + RE V DA  L  +A+ L      Q    ++  D +  +      + V+ +++EE   
Sbjct: 125 SRAREAVLDAHFLV-LASDLGKEKAKQLRSDLSSFDMLRYVETLLTHMGVNPLEAEELIR 184

Query: 190 -------QDLVSVSWKDIGLSVSSIFMNGHGCRTMLG--------PMSNQLKQRKTNNIS 249
                  + +V  SWK  G +  + F   H    +LG        P     + RK   I 
Sbjct: 185 DEDSPDFEFIVYDSWKITGRTAENTFNKTHTFHFLLGSIYGECPVPKPRVDRPRKVPVIQ 244

Query: 250 RKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILRRNKTVKLE--HLILNRKSFAQT 309
            +R+ P +  R  E     +E   + ++ +G++    R +    +     +++  SF +T
Sbjct: 245 EERAMPAQLRRMEESHQEATE--KEVERILGLLQTYFREDPDTPMSFFDFVVDPHSFPRT 304

Query: 310 VENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIMSHEVNY-SHFVFRFDYKDWK 338
           VEN+F +SF+++DG A I +D++    + P +    +    H     +  +    Y+DW+
Sbjct: 305 VENIFHVSFIIRDGFARIRLDQDRLPVIEPVSINEENEGFEHNTQVRNQGIIALSYRDWE 364

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BLAST of Cla004793 vs. Swiss-Prot
Match: NSE4_SCHPO (Non-structural maintenance of chromosome element 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nse4 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.1e-13
Identity = 64/283 (22.61%), Postives = 126/283 (44.52%), Query Frame = 1


Query: 64  RRVLRSRYLAVIHEISERREDL-SKDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDI 123
           +R LR RY  +I+++ E R +L  ++ +     I     L   V  P E   DA  L   
Sbjct: 6   KRDLRKRYRNLINKVQESRLELVDEENNNLYETITTANDLFSSVDAPTEATLDALLLTKT 65

Query: 124 ANSLVTSIRSQSNEGVTPSDFVSCL---LREFADINVSMQSEEQ-DLVSVSWKDIGLSVS 183
            +  + SI+++      P   +      +++F +   S  +  +   +  +W  +G   S
Sbjct: 66  VD--LASIKARQLHIGRPKFNIELFTKNIKQFLNYPTSHSNVTRIQEIDTAWSRLGKLAS 125

Query: 184 SIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEV-EDNGSEVKTDTDKNM 243
           +          M+GP+S + K+R      R +  P   ++P  + E N +  + +T KN+
Sbjct: 126 NCEKQPASLNLMVGPLSFRKKERNIQRRERLQKAPNVLTQPTMLNERNITTQENNTTKNV 185

Query: 244 GIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKN 303
             +  +L+ ++ V     I N +S+ QTVENLF +SFL K+G+A +  +++G   +  + 
Sbjct: 186 LHISRLLQAHQPVNFLKFITNPQSYPQTVENLFYVSFLFKEGKAALVENESGILMLETRI 245

Query: 304 APAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHR 341
            P    +++ E+     V       ++ ++    + E ++P R
Sbjct: 246 PPTDDQVVAGEIRNIQLVLDMTMDLYENIIKEYNIKESIIPTR 286

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BLAST of Cla004793 vs. TrEMBL
Match: A0A0A0LZJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G605680 PE=4 SV=1)

HSP 1 Score: 717.6 bits (1851), Expect = 8.5e-204
Identity = 372/413 (90.07%), Postives = 383/413 (92.74%), Query Frame = 1


Query: 1   MRPVKREPTSSSRSNRSRGG-----GDDGAVDAASLRDIKRERVARVRENSGEDNTTEEE 60
           MRPVKREPT S+RSNR+RGG     G  GAVD ASLRD KRERVAR RENSGE+N   EE
Sbjct: 1   MRPVKREPTVSTRSNRNRGGDGGGGGGGGAVDGASLRDSKRERVARERENSGEENM-NEE 60

Query: 61  VGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVAD 120
           VGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVAD
Sbjct: 61  VGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVAD 120

Query: 121 AEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGL 180
           AEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADIN S+ SEEQDLVSV+WKDIGL
Sbjct: 121 AEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINGSINSEEQDLVSVNWKDIGL 180

Query: 181 SVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDK 240
           SVSSIFMNG+GCRTMLGPMSNQLKQRKTNN+ RKR RPTESSRPAEVEDNGSE KTDTDK
Sbjct: 181 SVSSIFMNGYGCRTMLGPMSNQLKQRKTNNVPRKRVRPTESSRPAEVEDNGSEPKTDTDK 240

Query: 241 NMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSP 300
           NMGIMFGILRRNKTVKLEHLILNRKSF QTVENLFALSFLVKDGRAEITIDKNGSHFVSP
Sbjct: 241 NMGIMFGILRRNKTVKLEHLILNRKSFGQTVENLFALSFLVKDGRAEITIDKNGSHFVSP 300

Query: 301 KNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATA 360
           KNAPAHS IMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHR  LNS QVSQ E  A
Sbjct: 301 KNAPAHSAIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRTFLNSVQVSQEEVAA 360

Query: 361 DDSEAAALPTTPIRKLSRNRGLVIQTVVEDSPDNGSHSGATAILRCKRKLSQG 409
           D+SE+A LPTTPIRKLSRNRGLV+Q+VVEDSPDNGS SGATAILR KRKLSQG
Sbjct: 361 DNSESAGLPTTPIRKLSRNRGLVMQSVVEDSPDNGSQSGATAILRGKRKLSQG 412

[Close]

BLAST of Cla004793 vs. TrEMBL
Match: M5VYK3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006782mg PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 9.9e-120
Identity = 239/402 (59.45%), Postives = 292/402 (72.64%), Query Frame = 1


Query: 8   PTSSSRSN-RSRGGGDDGAVDAASLRDIKRERVARVRENSGEDNTTEEEVGQQDLTKRRV 67
           P S+ R   RS+ G  D   DA  LR +KRERV     N+G      +   +QD  +RR 
Sbjct: 2   PKSAKRQRTRSQSGDVD---DAEQLRAVKRERV---NANAGRVENESDLPSEQDSVQRRT 61

Query: 68  LRSRYLAVIHEISERREDLS-KDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANS 127
           LRS YLAV + ISE+R+DL   + ++F +IIN+VEKLHEQVQKPREQVADAEAL DI N+
Sbjct: 62  LRSDYLAVKNLISEKRDDLMCPESERFCLIINKVEKLHEQVQKPREQVADAEALLDITNT 121

Query: 128 LVTSIRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVSSIFMNGH 187
           L TS++SQS+ G++PSDFV+C+L  F  +N S+ S+E   VS+ WKDIGL+V+ IF   H
Sbjct: 122 LWTSVKSQSSAGISPSDFVTCVLNNFKQLNSSLASQEDAPVSIKWKDIGLAVAPIFKRAH 181

Query: 188 GCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILR 247
           GC TMLGPM+ +LKQRK   +  K ++PT + RP E++D   E KTDTDKNM  MF ILR
Sbjct: 182 GCCTMLGPMNTELKQRKAV-VRSKHAKPTTTDRPDEIDDTQGEEKTDTDKNMSTMFDILR 241

Query: 248 RNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIM 307
           RNK V+LE LILNRKSFAQTVENLFALSFLVKDGRAEIT+D NGSH VSP+NAPA + + 
Sbjct: 242 RNKRVRLEGLILNRKSFAQTVENLFALSFLVKDGRAEITVDANGSHLVSPRNAPAANLVA 301

Query: 308 SHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATADDSEAAALPT 367
           S EV Y HFVFRFD+KDWK M DM+PVGEELMPHR+  NS   SQ E  A  S+  ALPT
Sbjct: 302 SREVVYDHFVFRFDFKDWKLMKDMLPVGEELMPHRSPPNSLPASQEEPAAYSSQ-TALPT 361

Query: 368 TPIRKLSRNRGLVIQ--TVVEDSPDNGSHSGATAILRCKRKL 406
           TPIRKLSRNRG ++Q  +VVE+SP+N   +G   + R KRKL
Sbjct: 362 TPIRKLSRNRGRLVQEESVVEESPENDDAAGTNVVRRSKRKL 395

[Close]

BLAST of Cla004793 vs. TrEMBL
Match: V4TZZ5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015454mg PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 3.3e-115
Identity = 228/413 (55.21%), Postives = 297/413 (71.91%), Query Frame = 1


Query: 2   RPVKREPTSSSRSNRSRGGGDDGAVDAAS---LRDIKRERVARVRENSGEDNTTEEEVGQ 61
           R VKRE  SSSR          G VD +S   LR +KRE+++R   +   DN +      
Sbjct: 3   RAVKREAGSSSR----------GRVDDSSEQLLRTVKREKLSRNGADENLDNESTRTNQP 62

Query: 62  QDLTKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAE 121
           QD  +RRVLRS+YLAV+ +I ++R+DL++ D  KFN I+ EV+ LH  VQKPREQVADAE
Sbjct: 63  QDTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAE 122

Query: 122 ALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADIN---VSMQSEEQDLVSVSWKDIG 181
           AL DI ++LVTS++SQSNEGVTP+DFVSCLL  F + N   +S Q      +S++WKD+G
Sbjct: 123 ALLDITSTLVTSVKSQSNEGVTPTDFVSCLLTMFGESNSNRLSSQGNNNAQMSINWKDVG 182

Query: 182 LSVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTD 241
           L+VS      HGC TMLGPM  ++KQRK   + +KR +PT++++P EV+D+ +  KTDTD
Sbjct: 183 LAVSPFLSACHGCSTMLGPMKTEVKQRKVV-VRKKREKPTQTAQPEEVDDSEAVEKTDTD 242

Query: 242 KNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVS 301
           KNM  MF ILRR K+V+LE LILNR+SFAQTVENLFALSFLVKDGR EI ++++G H V+
Sbjct: 243 KNMTTMFEILRRKKSVRLESLILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLVA 302

Query: 302 PKNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEAT 361
           P+NAP+  ++MS +V YSHFVFR+D+KDWK M D+VP GEELMPHR   N+  V QAE  
Sbjct: 303 PRNAPSADSVMSGQVKYSHFVFRYDFKDWKLMKDVVPAGEELMPHRESSNALPVPQAEQA 362

Query: 362 ADDSEAAALPTTPIRKLSRNRGLVI--QTVVEDSPDNGSHSGATAILRCKRKL 406
           + ++   A  TTPIRKLSRNRGLVI  ++VVEDSP++     +T +LRCKRK+
Sbjct: 363 SYNNTEGASRTTPIRKLSRNRGLVIREESVVEDSPEDDVAERSTRMLRCKRKI 404

[Close]

BLAST of Cla004793 vs. TrEMBL
Match: A0A067EZQ6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015540mg PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 3.3e-115
Identity = 228/413 (55.21%), Postives = 297/413 (71.91%), Query Frame = 1


Query: 2   RPVKREPTSSSRSNRSRGGGDDGAVDAAS---LRDIKRERVARVRENSGEDNTTEEEVGQ 61
           R VKRE  SSSR          G VD +S   LR +KRE+++R   +   DN +      
Sbjct: 3   RAVKREAGSSSR----------GRVDDSSEQLLRTVKREKLSRNGADENLDNESTRTNQP 62

Query: 62  QDLTKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAE 121
           QD  +RRVLRS+YLAV+ +I ++R+DL++ D  KFN I+ EV+ LH  VQKPREQVADAE
Sbjct: 63  QDTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAE 122

Query: 122 ALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADIN---VSMQSEEQDLVSVSWKDIG 181
           AL DI ++LVTS++SQSNEGVTP+DFVSCLL  F + N   +S Q      +S++WKD+G
Sbjct: 123 ALLDITSTLVTSVKSQSNEGVTPTDFVSCLLTMFGESNSNRLSSQGNNNAQMSINWKDVG 182

Query: 182 LSVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTD 241
           L+VS      HGC TMLGPM  ++KQRK   + +KR +PT++++P EV+D+ +  KTDTD
Sbjct: 183 LAVSPFLSACHGCSTMLGPMKTEVKQRKVV-VRKKREKPTQTAQPEEVDDSEAVEKTDTD 242

Query: 242 KNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVS 301
           KNM  MF ILRR K+V+LE LILNR+SFAQTVENLFALSFLVKDGR EI ++++G H V+
Sbjct: 243 KNMTTMFEILRRKKSVRLESLILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLVA 302

Query: 302 PKNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEAT 361
           P+NAP+  ++MS +V YSHFVFR+D+KDWK M D+VP GEELMPHR   N+  V QAE  
Sbjct: 303 PRNAPSADSVMSGQVKYSHFVFRYDFKDWKLMKDVVPAGEELMPHRESSNALPVPQAEQA 362

Query: 362 ADDSEAAALPTTPIRKLSRNRGLVI--QTVVEDSPDNGSHSGATAILRCKRKL 406
           + ++   A  TTPIRKLSRNRGLVI  ++VVEDSP++     +T +LRCKRK+
Sbjct: 363 SYNNTEGASRTTPIRKLSRNRGLVIREESVVEDSPEDDVAERSTRMLRCKRKI 404

[Close]

BLAST of Cla004793 vs. TrEMBL
Match: A0A061GSH5_THECC (Nse4, component of Smc5/6 DNA repair complex, putative isoform 1 OS=Theobroma cacao GN=TCM_040402 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 1.6e-114
Identity = 222/373 (59.52%), Postives = 285/373 (76.41%), Query Frame = 1


Query: 36  RERVARVRENSGEDNTTEEEVGQQDLTKRRVLRSRYLAVIHEISERREDLSK-DLDKFNV 95
           R RVAR   +   D  +++   Q+D   RR+LRS+YLAV+ +I++ R+++SK D +KFN+
Sbjct: 21  RTRVARPARHDSADVESDQLSRQEDAANRRLLRSKYLAVMTKINDARDEISKVDSNKFNI 80

Query: 96  IINEVEKLHEQVQKPREQVADAEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADI 155
           IINEV+ LH+QV KPREQVADAEAL DIAN+L TS++S S EGV+ +D+V+CL+REF   
Sbjct: 81  IINEVDNLHQQVSKPREQVADAEALLDIANTLATSVKSISCEGVSLADYVNCLVREFGKS 140

Query: 156 NVSMQSEEQDLVSVSWKDIGLSVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPT 215
           N S+ ++E + +SV+WKDIG++VS  F    G  TMLGPM N+LKQRK+    ++  RPT
Sbjct: 141 NRSLDTQENEQISVNWKDIGMAVSPFFTTCKGICTMLGPMKNELKQRKSIVTRKRAIRPT 200

Query: 216 ESSRPAEVEDNGSEVKTDTDKNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSF 275
           +++RP EV+D G+E KTDTDKNM  MF ILRR + VKLE LILNR SFAQTVENLFALSF
Sbjct: 201 DTARPEEVDDTGAEEKTDTDKNMATMFEILRRKRQVKLESLILNRSSFAQTVENLFALSF 260

Query: 276 LVKDGRAEITIDKNGSHFVSPKNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGE 335
           LVKDGRAEI +DK+GSH VSPKNAP   ++ + EV YSHFVFRFD+KDWK M+  VPVGE
Sbjct: 261 LVKDGRAEIVVDKSGSHIVSPKNAPGTMSVTTGEVTYSHFVFRFDFKDWKLMMSGVPVGE 320

Query: 336 ELMPHRNILNSEQVSQAEATADDSEAAALPTTPIRKLSRNRGLVIQ-TVVEDSPDNGSHS 395
           ELMPHR   +S  +S+AE+ A++SE  AL TTPIRKLSRNRGLV+Q ++VEDSP+    S
Sbjct: 321 ELMPHREESHS-ILSKAESAANNSE-GALTTTPIRKLSRNRGLVLQESIVEDSPEIDDGS 380

Query: 396 GATAILRCKRKLS 407
               I RC+RKL+
Sbjct: 381 KGPGIRRCRRKLN 391

[Close]

BLAST of Cla004793 vs. NCBI nr
Match: gi|659100485|ref|XP_008451119.1| (PREDICTED: non-structural maintenance of chromosomes element 4 homolog A [Cucumis melo])

HSP 1 Score: 719.2 bits (1855), Expect = 4.2e-204
Identity = 371/409 (90.71%), Postives = 387/409 (94.62%), Query Frame = 1


Query: 1   MRPVKREPTSSSRSNRSRGG-GDDGAVDAASLRDIKRERVARVRENSGEDNTTEEEVGQQ 60
           MRPVKREPT S+RS R+RGG G  GAVD ASLRD KRERVAR RENSGE+N + EEVGQQ
Sbjct: 1   MRPVKREPTVSTRSKRNRGGDGGGGAVDGASLRDSKRERVARERENSGEENMS-EEVGQQ 60

Query: 61  DLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEAL 120
           DLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEAL
Sbjct: 61  DLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEAL 120

Query: 121 QDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVSS 180
           QDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADIN S+ SEEQ+LVSV+WKDIGLSVSS
Sbjct: 121 QDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINGSINSEEQELVSVNWKDIGLSVSS 180

Query: 181 IFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGI 240
           IFMNG+GCRTMLGPMSNQLKQRKTNN+ RKRS+PTESSRPAEVEDNGSE KTDTDKNMGI
Sbjct: 181 IFMNGYGCRTMLGPMSNQLKQRKTNNVPRKRSKPTESSRPAEVEDNGSEPKTDTDKNMGI 240

Query: 241 MFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAP 300
           MFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAP
Sbjct: 241 MFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAP 300

Query: 301 AHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATADDSE 360
           AHS IMSHEVNYSHFVFRFDYKDWKPMV+MVPVGEELMPHRN LNS  VS+ EATADDSE
Sbjct: 301 AHSAIMSHEVNYSHFVFRFDYKDWKPMVNMVPVGEELMPHRNFLNSVPVSEEEATADDSE 360

Query: 361 AAALPTTPIRKLSRNRGLVIQTVVEDSPDNGSHSGATAILRCKRKLSQG 409
           +A+LPTTPIRKLSRNRGLV+Q+VVEDSPDNGS SG TAILR KRKLSQG
Sbjct: 361 SASLPTTPIRKLSRNRGLVMQSVVEDSPDNGSQSGPTAILRGKRKLSQG 408

[Close]

BLAST of Cla004793 vs. NCBI nr
Match: gi|449462613|ref|XP_004149035.1| (PREDICTED: non-structural maintenance of chromosomes element 4 homolog A-like [Cucumis sativus])

HSP 1 Score: 717.6 bits (1851), Expect = 1.2e-203
Identity = 372/413 (90.07%), Postives = 383/413 (92.74%), Query Frame = 1


Query: 1   MRPVKREPTSSSRSNRSRGG-----GDDGAVDAASLRDIKRERVARVRENSGEDNTTEEE 60
           MRPVKREPT S+RSNR+RGG     G  GAVD ASLRD KRERVAR RENSGE+N   EE
Sbjct: 1   MRPVKREPTVSTRSNRNRGGDGGGGGGGGAVDGASLRDSKRERVARERENSGEENM-NEE 60

Query: 61  VGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVAD 120
           VGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVAD
Sbjct: 61  VGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVAD 120

Query: 121 AEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGL 180
           AEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADIN S+ SEEQDLVSV+WKDIGL
Sbjct: 121 AEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINGSINSEEQDLVSVNWKDIGL 180

Query: 181 SVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDK 240
           SVSSIFMNG+GCRTMLGPMSNQLKQRKTNN+ RKR RPTESSRPAEVEDNGSE KTDTDK
Sbjct: 181 SVSSIFMNGYGCRTMLGPMSNQLKQRKTNNVPRKRVRPTESSRPAEVEDNGSEPKTDTDK 240

Query: 241 NMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSP 300
           NMGIMFGILRRNKTVKLEHLILNRKSF QTVENLFALSFLVKDGRAEITIDKNGSHFVSP
Sbjct: 241 NMGIMFGILRRNKTVKLEHLILNRKSFGQTVENLFALSFLVKDGRAEITIDKNGSHFVSP 300

Query: 301 KNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATA 360
           KNAPAHS IMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHR  LNS QVSQ E  A
Sbjct: 301 KNAPAHSAIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRTFLNSVQVSQEEVAA 360

Query: 361 DDSEAAALPTTPIRKLSRNRGLVIQTVVEDSPDNGSHSGATAILRCKRKLSQG 409
           D+SE+A LPTTPIRKLSRNRGLV+Q+VVEDSPDNGS SGATAILR KRKLSQG
Sbjct: 361 DNSESAGLPTTPIRKLSRNRGLVMQSVVEDSPDNGSQSGATAILRGKRKLSQG 412

[Close]

BLAST of Cla004793 vs. NCBI nr
Match: gi|595824841|ref|XP_007205305.1| (hypothetical protein PRUPE_ppa006782mg [Prunus persica])

HSP 1 Score: 438.3 bits (1126), Expect = 1.4e-119
Identity = 239/402 (59.45%), Postives = 292/402 (72.64%), Query Frame = 1


Query: 8   PTSSSRSN-RSRGGGDDGAVDAASLRDIKRERVARVRENSGEDNTTEEEVGQQDLTKRRV 67
           P S+ R   RS+ G  D   DA  LR +KRERV     N+G      +   +QD  +RR 
Sbjct: 2   PKSAKRQRTRSQSGDVD---DAEQLRAVKRERV---NANAGRVENESDLPSEQDSVQRRT 61

Query: 68  LRSRYLAVIHEISERREDLS-KDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANS 127
           LRS YLAV + ISE+R+DL   + ++F +IIN+VEKLHEQVQKPREQVADAEAL DI N+
Sbjct: 62  LRSDYLAVKNLISEKRDDLMCPESERFCLIINKVEKLHEQVQKPREQVADAEALLDITNT 121

Query: 128 LVTSIRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVSSIFMNGH 187
           L TS++SQS+ G++PSDFV+C+L  F  +N S+ S+E   VS+ WKDIGL+V+ IF   H
Sbjct: 122 LWTSVKSQSSAGISPSDFVTCVLNNFKQLNSSLASQEDAPVSIKWKDIGLAVAPIFKRAH 181

Query: 188 GCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILR 247
           GC TMLGPM+ +LKQRK   +  K ++PT + RP E++D   E KTDTDKNM  MF ILR
Sbjct: 182 GCCTMLGPMNTELKQRKAV-VRSKHAKPTTTDRPDEIDDTQGEEKTDTDKNMSTMFDILR 241

Query: 248 RNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIM 307
           RNK V+LE LILNRKSFAQTVENLFALSFLVKDGRAEIT+D NGSH VSP+NAPA + + 
Sbjct: 242 RNKRVRLEGLILNRKSFAQTVENLFALSFLVKDGRAEITVDANGSHLVSPRNAPAANLVA 301

Query: 308 SHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATADDSEAAALPT 367
           S EV Y HFVFRFD+KDWK M DM+PVGEELMPHR+  NS   SQ E  A  S+  ALPT
Sbjct: 302 SREVVYDHFVFRFDFKDWKLMKDMLPVGEELMPHRSPPNSLPASQEEPAAYSSQ-TALPT 361

Query: 368 TPIRKLSRNRGLVIQ--TVVEDSPDNGSHSGATAILRCKRKL 406
           TPIRKLSRNRG ++Q  +VVE+SP+N   +G   + R KRKL
Sbjct: 362 TPIRKLSRNRGRLVQEESVVEESPENDDAAGTNVVRRSKRKL 395

[Close]

BLAST of Cla004793 vs. NCBI nr
Match: gi|645277126|ref|XP_008243618.1| (PREDICTED: non-structural maintenance of chromosomes element 4 homolog A [Prunus mume])

HSP 1 Score: 434.5 bits (1116), Expect = 2.1e-118
Identity = 236/398 (59.30%), Postives = 288/398 (72.36%), Query Frame = 1


Query: 11  SSRSNRSRGGGDDGAVDAASLRDIKRERVARVRENSGEDNTTEEEVGQQDLTKRRVLRSR 70
           S++  R+R    D   DA  LR +KRERV     N+G      +   +QD  +RR LRS 
Sbjct: 4   SAKRQRTRSQSRD-VDDAEQLRAVKRERV---HANAGRVENESDLPSEQDSVQRRTLRSD 63

Query: 71  YLAVIHEISERREDLS-KDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANSLVTS 130
           YLAV + I E+R+DL   + ++F +IIN+VEKLHEQVQKPREQVADAEAL DI N+L TS
Sbjct: 64  YLAVKNLICEKRDDLMCPESERFCLIINKVEKLHEQVQKPREQVADAEALLDITNTLWTS 123

Query: 131 IRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVSSIFMNGHGCRT 190
           ++SQS+ G++PSDFV+C+L  F   N S+ S+E   VS+ WKDIGL+VS IF   HGC T
Sbjct: 124 VKSQSSAGISPSDFVTCVLNNFKQSNSSLASQEDAPVSIKWKDIGLAVSPIFKRAHGCCT 183

Query: 191 MLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILRRNKT 250
           MLGPM+ +LKQRK   +  K ++PT + RP E++D   E KTDTDKNM  MF ILRRNK 
Sbjct: 184 MLGPMNTELKQRKAV-VRSKHAKPTTTDRPDEIDDTQGEEKTDTDKNMSTMFDILRRNKR 243

Query: 251 VKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIMSHEV 310
           V+LE LILNRKSFAQTVENLFALSFLVKDGRAEIT+D NGSH VSP+NAPA + + S EV
Sbjct: 244 VRLEGLILNRKSFAQTVENLFALSFLVKDGRAEITVDANGSHLVSPRNAPAANLVASREV 303

Query: 311 NYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATADDSEAAALPTTPIR 370
            Y HFVFRFD+KDWK M DM+PVGEELMPHR+  NS   SQ E  A  S+  ALPTTPIR
Sbjct: 304 VYDHFVFRFDFKDWKLMKDMLPVGEELMPHRSPPNSLPASQEEPAAYSSQ-TALPTTPIR 363

Query: 371 KLSRNRGLVIQ--TVVEDSPDNGSHSGATAILRCKRKL 406
           KLSRNRG ++Q  +VVE+SP+N   +G   + R KRKL
Sbjct: 364 KLSRNRGRLVQEESVVEESPENDDAAGTNVVRRSKRKL 395

[Close]

BLAST of Cla004793 vs. NCBI nr
Match: gi|567907227|ref|XP_006445927.1| (hypothetical protein CICLE_v10015454mg [Citrus clementina])

HSP 1 Score: 423.3 bits (1087), Expect = 4.8e-115
Identity = 228/413 (55.21%), Postives = 297/413 (71.91%), Query Frame = 1


Query: 2   RPVKREPTSSSRSNRSRGGGDDGAVDAAS---LRDIKRERVARVRENSGEDNTTEEEVGQ 61
           R VKRE  SSSR          G VD +S   LR +KRE+++R   +   DN +      
Sbjct: 3   RAVKREAGSSSR----------GRVDDSSEQLLRTVKREKLSRNGADENLDNESTRTNQP 62

Query: 62  QDLTKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAE 121
           QD  +RRVLRS+YLAV+ +I ++R+DL++ D  KFN I+ EV+ LH  VQKPREQVADAE
Sbjct: 63  QDTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAE 122

Query: 122 ALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADIN---VSMQSEEQDLVSVSWKDIG 181
           AL DI ++LVTS++SQSNEGVTP+DFVSCLL  F + N   +S Q      +S++WKD+G
Sbjct: 123 ALLDITSTLVTSVKSQSNEGVTPTDFVSCLLTMFGESNSNRLSSQGNNNAQMSINWKDVG 182

Query: 182 LSVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTD 241
           L+VS      HGC TMLGPM  ++KQRK   + +KR +PT++++P EV+D+ +  KTDTD
Sbjct: 183 LAVSPFLSACHGCSTMLGPMKTEVKQRKVV-VRKKREKPTQTAQPEEVDDSEAVEKTDTD 242

Query: 242 KNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVS 301
           KNM  MF ILRR K+V+LE LILNR+SFAQTVENLFALSFLVKDGR EI ++++G H V+
Sbjct: 243 KNMTTMFEILRRKKSVRLESLILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLVA 302

Query: 302 PKNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEAT 361
           P+NAP+  ++MS +V YSHFVFR+D+KDWK M D+VP GEELMPHR   N+  V QAE  
Sbjct: 303 PRNAPSADSVMSGQVKYSHFVFRYDFKDWKLMKDVVPAGEELMPHRESSNALPVPQAEQA 362

Query: 362 ADDSEAAALPTTPIRKLSRNRGLVI--QTVVEDSPDNGSHSGATAILRCKRKL 406
           + ++   A  TTPIRKLSRNRGLVI  ++VVEDSP++     +T +LRCKRK+
Sbjct: 363 SYNNTEGASRTTPIRKLSRNRGLVIREESVVEDSPEDDVAERSTRMLRCKRKI 404

The following BLAST results are available for this feature:

BLAST of Cla004793 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NSE4A_ARATH	9.9e-105	51.88	Non-structural maintenance of chromosomes element 4 homolog A OS=Arabidopsis tha...	[more]
NSE4B_ARATH	1.5e-92	47.69	Non-structural maintenance of chromosomes element 4 homolog B OS=Arabidopsis tha...	[more]
NSE4A_BOVIN	6.6e-16	21.96	Non-structural maintenance of chromosomes element 4 homolog A OS=Bos taurus GN=N...	[more]
NSE4A_HUMAN	8.6e-16	22.52	Non-structural maintenance of chromosomes element 4 homolog A OS=Homo sapiens GN...	[more]
NSE4_SCHPO	3.1e-13	22.61	Non-structural maintenance of chromosome element 4 OS=Schizosaccharomyces pombe ...	[more]

BLAST of Cla004793 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZJ0_CUCSA	8.5e-204	90.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G605680 PE=4 SV=1	[more]
M5VYK3_PRUPE	9.9e-120	59.45	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006782mg PE=4 SV=1	[more]
V4TZZ5_9ROSI	3.3e-115	55.21	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015454mg PE=4 SV=1	[more]
A0A067EZQ6_CITSI	3.3e-115	55.21	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015540mg PE=4 SV=1	[more]
A0A061GSH5_THECC	1.6e-114	59.52	Nse4, component of Smc5/6 DNA repair complex, putative isoform 1 OS=Theobroma ca...	[more]

BLAST of Cla004793 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659100485\|ref\|XP_008451119.1\|	4.2e-204	90.71	PREDICTED: non-structural maintenance of chromosomes element 4 homolog A [Cucumi...	[more]
gi\|449462613\|ref\|XP_004149035.1\|	1.2e-203	90.07	PREDICTED: non-structural maintenance of chromosomes element 4 homolog A-like [C...	[more]
gi\|595824841\|ref\|XP_007205305.1\|	1.4e-119	59.45	hypothetical protein PRUPE_ppa006782mg [Prunus persica]	[more]
gi\|645277126\|ref\|XP_008243618.1\|	2.1e-118	59.30	PREDICTED: non-structural maintenance of chromosomes element 4 homolog A [Prunus...	[more]
gi\|567907227\|ref\|XP_006445927.1\|	4.8e-115	55.21	hypothetical protein CICLE_v10015454mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014854	Nse4_C
IPR027786	Nse4/EID

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0030915	Smc5-Smc6 complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006281	DNA repair

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0006310	DNA recombination
biological_process	GO:2001022	positive regulation of response to DNA damage stimulus
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030915	Smc5-Smc6 complex
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU09287	watermelon unigene v2 vs TrEMBL	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla004793	Cla004793.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU09287	WMU09287	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014854	Non-structural maintenance of chromosome element 4, C-terminal	PFAM	PF08743	Nse4_C	coord: 250..339 score: 2.8
IPR027786	Nse4/EID family	PANTHER	PTHR16140	UNCHARACTERIZED	coord: 58..398 score: 6.1E
None	No IPR available	PANTHER	PTHR16140:SF5	SUBFAMILY NOT NAMED	coord: 58..398 score: 6.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla004793	Cla97C03G063980	Watermelon (97103) v2	wmwmbB125
Cla004793	Csa1G605680	Cucumber (Chinese Long) v2	cuwmB020
Cla004793	MELO3C015669	Melon (DHL92) v3.5.1	mewmB271
Cla004793	ClCG03G013690	Watermelon (Charleston Gray)	wcgwmB224
Cla004793	CSPI01G29940	Wild cucumber (PI 183967)	cpiwmB022
Cla004793	Cucsa.143010	Cucumber (Gy14) v1	cgywmB251
Cla004793	CmaCh10G009640	Cucurbita maxima (Rimu)	cmawmB046
Cla004793	CmaCh11G008280	Cucurbita maxima (Rimu)	cmawmB099
Cla004793	CmoCh10G010120	Cucurbita moschata (Rifu)	cmowmB037
Cla004793	CmoCh11G008350	Cucurbita moschata (Rifu)	cmowmB088
Cla004793	Lsi06G004720	Bottle gourd (USVL1VR-Ls)	lsiwmB396
Cla004793	Cp4.1LG18g01420	Cucurbita pepo (Zucchini)	cpewmB355
Cla004793	Cp4.1LG04g11970	Cucurbita pepo (Zucchini)	cpewmB642
Cla004793	CsGy1G029280	Cucumber (Gy14) v2	cgybwmB022
Cla004793	MELO3C015669.2	Melon (DHL92) v3.6.1	medwmB262
Cla004793	Carg17990	Silver-seed gourd	carwmB0163
Cla004793	Carg16960	Silver-seed gourd	carwmB0463
Cla004793	CsaV3_1G042360	Cucumber (Chinese Long) v3	cucwmB025
Cla004793	Bhi02G001356	Wax gourd	wgowmB653

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla004793	Wax gourd	wgowmB608
Cla004793	Watermelon (97103) v1	wmwmB088
Cla004793	Cucurbita maxima (Rimu)	cmawmB516
Cla004793	Cucurbita moschata (Rifu)	cmowmB506
Cla004793	Melon (DHL92) v3.5.1	mewmB224
Cla004793	Melon (DHL92) v3.5.1	mewmB403
Cla004793	Bottle gourd (USVL1VR-Ls)	lsiwmB055
Cla004793	Cucumber (Gy14) v2	cgybwmB543
Cla004793	Melon (DHL92) v3.6.1	medwmB396
Cla004793	Silver-seed gourd	carwmB0516
Cla004793	Silver-seed gourd	carwmB0919
Cla004793	Cucumber (Chinese Long) v3	cucwmB610