BLAST of Cp4.1LG18g01420 vs. Swiss-Prot
Match:
NSE4A_ARATH (Non-structural maintenance of chromosomes element 4 homolog A OS=Arabidopsis thaliana GN=NSE4A PE=2 SV=1)
HSP 1 Score: 353.2 bits (905), Expect = 4.1e-96
Identity = 215/439 (48.97%), Postives = 281/439 (64.01%), Query Frame = 1
Query: 2 RPVKRESAASSRTNRSRGGAVAVD--AASLRGVKRERMVAREREKSGVDNTTEEEEGQQE 61
+ VKRES A+ GG D LR VK+E+ E + D +E +Q
Sbjct: 3 KTVKRESEAT-------GGKREADDEPEKLRSVKKEKQRKTEADSVRPDEPPPPQEEEQG 62
Query: 62 LSKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAEAL 121
+S RR+LRS+YL++ +EI++ ++DL K D DKF+ IIN VE LH+QV+KPREQ+ADAEAL
Sbjct: 63 ISDRRILRSKYLSLQNEINDCKDDLMKIDSDKFSRIINAVENLHQQVRKPREQIADAEAL 122
Query: 122 QDIASSLMTSIRSQSNEGVTPSDFVSCLLREFADINGNITSEENDLVSVSWKDIGLSVSS 181
DIA++LM+S++SQS GV+P++FV+ L+ F + I ++E VS+ WKD+G +V S
Sbjct: 123 LDIANTLMSSVKSQSAHGVSPAEFVNALISGFGQGSLGIDTDETAQVSLKWKDLGFAVCS 182
Query: 182 IFMNGHGCRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPTEVEDNVSEEKTDTDKNMGI 241
+ GC TMLGPM +LKQRK +RKR++P E RP EV+D+ SEEKTDTDKNM I
Sbjct: 183 TVLVSCGCSTMLGPMDTELKQRKRAP-NRKRTKPGEGVRPDEVDDSQSEEKTDTDKNMTI 242
Query: 242 MFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDENGSHFVCEYLQT 301
MF IL + K V+LE+L+LNR+SFAQTVENLFALSFL KDGR I +D++GSH
Sbjct: 243 MFNILGKKKRVQLENLVLNRRSFAQTVENLFALSFLAKDGRVEIIVDKSGSH-------- 302
Query: 302 KRFMLLFENIVFFVVYLHSLPTFSAPKNAPAHSAIMSHEVNYSHFVFRFDFKDWKPMVDM 361
F+ P+NAP + +MS EV Y+HFVFR DFKDWK M +M
Sbjct: 303 ----------------------FAMPRNAPDANVVMSGEVIYNHFVFRLDFKDWKLMSEM 362
Query: 362 VPVGDELMPHR-NILNSAQVPQAEASTDDSEAAALPTTPIRKLSRNRGLVMQ--SVVEDS 421
VP+G+ELMPHR + S+ P A A TTPIRKLSRNRGLV+Q +VVED+
Sbjct: 363 VPLGEELMPHRQTAVASSSCPAASAPASADFTQDTQTTPIRKLSRNRGLVVQEETVVEDT 400
Query: 422 PDNGAHSGATAILRCKRKL 435
PD G RCKR+L
Sbjct: 423 PDK---EGDGTRRRCKRRL 400
BLAST of Cp4.1LG18g01420 vs. Swiss-Prot
Match:
NSE4B_ARATH (Non-structural maintenance of chromosomes element 4 homolog B OS=Arabidopsis thaliana GN=NSE4B PE=2 SV=1)
HSP 1 Score: 308.9 bits (790), Expect = 8.8e-83
Identity = 173/367 (47.14%), Postives = 244/367 (66.49%), Query Frame = 1
Query: 53 EEEGQQELSKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQ 112
+EE +Q ++ RR +RS+YLA+ H+I + ++DL+K D +KFN IINEVE LH++V+KPREQ
Sbjct: 52 QEEEEQGIADRRAIRSQYLALTHKIKDAKDDLTKIDSNKFNSIINEVENLHQKVRKPREQ 111
Query: 113 VADAEALQDIASSLMTSIRSQS-NEGVTPSDFVSCLLREFADINGNITSEENDLVSVSWK 172
+ADAEAL D+ +S+++S++SQS + GV+P++FV+ L+ F + I ++EN VS+ WK
Sbjct: 112 IADAEALLDLTNSVVSSVKSQSAHGGVSPAEFVNALINGFGKTSLRIDADENTQVSMKWK 171
Query: 173 DIGLSVSSIFMNGHGCRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPTEVEDNVSEEKT 232
D+G +V S + GC TM+GPM +++KQRK+ +RKR++P +P EV+D +E+K+
Sbjct: 172 DLGFTVCSTVLVSCGCTTMMGPMYSEMKQRKSRVGNRKRTKPGAGVKPEEVDDTEAEKKS 231
Query: 233 DTDKNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDENGSH 292
DTD NM +MF ILR+NK VK+E+L+LNRKSFAQT EN+FALSFLVKDGR IT+D NGSH
Sbjct: 232 DTDNNMAVMFNILRKNKRVKIENLVLNRKSFAQTAENMFALSFLVKDGRVEITVDNNGSH 291
Query: 293 FVCEYLQTKRFMLLFENIVFFVVYLHSLPTFSAPKNAPAHSAIMSHEVNYSHFVFRFDFK 352
FV P+NAPA + ++S EV Y+HFV RFD+K
Sbjct: 292 FV------------------------------EPRNAPAANLVLSGEVAYNHFVLRFDYK 351
Query: 353 DWKPMVDMVPVGDELMPHRNILNSAQVPQAEASTDDSEAAALPTTPIRKLSRNRGLVMQ- 412
DW+PM MV VG+ELMP R + + + D E LSR +G V+Q
Sbjct: 352 DWEPMSKMVAVGEELMPLR---------ETKVAQDSIE-----------LSRKQGSVIQE 368
Query: 413 -SVVEDS 416
+VVEDS
Sbjct: 412 ETVVEDS 368
BLAST of Cp4.1LG18g01420 vs. Swiss-Prot
Match:
NSE4_SCHPO (Non-structural maintenance of chromosome element 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nse4 PE=1 SV=1)
HSP 1 Score: 72.8 bits (177), Expect = 1.1e-11
Identity = 62/232 (26.72%), Postives = 107/232 (46.12%), Query Frame = 1
Query: 63 RRVLRSRYLAVIHEISERREDL-SKDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDI 122
+R LR RY +I+++ E R +L ++ + I L V P E DA L
Sbjct: 6 KRDLRKRYRNLINKVQESRLELVDEENNNLYETITTANDLFSSVDAPTEATLDALLLTKT 65
Query: 123 ASSLMTSIRSQSNEGVTPSDFVSCLLREFADINGNITSEEN----DLVSVSWKDIGLSVS 182
+ SI+++ P + + TS N + +W +G S
Sbjct: 66 VD--LASIKARQLHIGRPKFNIELFTKNIKQFLNYPTSHSNVTRIQEIDTAWSRLGKLAS 125
Query: 183 SIFMNGHGCRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPTEV-EDNVSEEKTDTDKNM 242
+ M+GP+S + K+R R + P +PT + E N++ ++ +T KN+
Sbjct: 126 NCEKQPASLNLMVGPLSFRKKERNIQRRERLQKAPNVLTQPTMLNERNITTQENNTTKNV 185
Query: 243 GIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDENG 289
+ +L+ ++ V I N +S+ QTVENLF +SFL K+G+AA+ +E+G
Sbjct: 186 LHISRLLQAHQPVNFLKFITNPQSYPQTVENLFYVSFLFKEGKAALVENESG 235
BLAST of Cp4.1LG18g01420 vs. Swiss-Prot
Match:
NSE4A_HUMAN (Non-structural maintenance of chromosomes element 4 homolog A OS=Homo sapiens GN=NSMCE4A PE=1 SV=2)
HSP 1 Score: 68.2 bits (165), Expect = 2.6e-10
Identity = 78/292 (26.71%), Postives = 130/292 (44.52%), Query Frame = 1
Query: 28 SLRGVKRERMVAREREK--------SG---VDNTTEEEEGQQELSKRRVLRSRYLAVIHE 87
S RG RER A ER SG +D + E E Q L ++ +R +Y A+I+
Sbjct: 38 SRRGSARERREAPERPSLEDTEPSDSGDEMMDPASLEAEADQGLCRQ--IRHQYRALINS 97
Query: 88 ISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIASSLMTSIRSQSNEG 147
+ + RED+ DK ++ E L +V + RE V DA L +AS L Q
Sbjct: 98 VQQNREDILNAGDKLTEVLEEANTLFNEVSRAREAVLDAHFLV-LASDLGKEKAKQLRSD 157
Query: 148 VTPSD---FVSCLLREFA----DINGNITSEEND----LVSVSWKDIGLSVSSIFMNGHG 207
++ D +V LL + I E++ +V SWK G + + F H
Sbjct: 158 LSSFDMLRYVETLLTHMGVNPLEAEELIRDEDSPDFEFIVYDSWKITGRTAENTFNKTHT 217
Query: 208 CRTMLG--------PMSNQLKQRKTTNISRKRSRPTESYRPTEVEDNVSEEKTDTDKNMG 267
+LG P + RK I +R+ P + R E +E+ + ++ +G
Sbjct: 218 FHFLLGSIYGECPVPKPRVDRPRKVPVIQEERAMPAQLRRMEESHQEATEK--EVERILG 277
Query: 268 IMFGILRRNKTVKLE--HLILNRKSFAQTVENLFALSFLVKDGRAAITIDEN 288
++ R + + +++ SF +TVEN+F +SF+++DG A I +D++
Sbjct: 278 LLQTYFREDPDTPMSFFDFVVDPHSFPRTVENIFHVSFIIRDGFARIRLDQD 324
BLAST of Cp4.1LG18g01420 vs. Swiss-Prot
Match:
NSE4A_BOVIN (Non-structural maintenance of chromosomes element 4 homolog A OS=Bos taurus GN=NSMCE4A PE=2 SV=1)
HSP 1 Score: 62.4 bits (150), Expect = 1.4e-08
Identity = 76/321 (23.68%), Postives = 135/321 (42.06%), Query Frame = 1
Query: 2 RPVKRESAASSRTNRSRGGAVA---VDAASLRGVKRERMVAREREKSGVDNTTEEEEGQQ 61
RP R +R+R + + + S RG ER A ER G+++T + G +
Sbjct: 9 RPEGRGRGRDPHRDRTRSRSRSRSPLSPGSRRGAAPERREAPERP--GLEDTEPSDSGDE 68
Query: 62 EL-----------SKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQK 121
+ S R +R +Y A+I+ + + RED+ DK ++ E L V +
Sbjct: 69 MIDPASLEEETDPSLCRQIRHQYRALINSVQQNREDILNASDKLTEVLEEANTLFNGVSR 128
Query: 122 PREQVADAEAL---QDIASSLMTSIRSQSNEGVTPSDFVSCLLREFAD--------INGN 181
RE V DA L D+ +RS N +V LL I
Sbjct: 129 AREAVLDAHFLVLASDLGKEKAKQLRSDLN-SFDMLRYVETLLTHMGVNPLEAEELIRDE 188
Query: 182 ITSEENDLVSVSWKDIGLSVSSIFMNGHGCRTMLGPMSNQL--------KQRKTTNISRK 241
+S+ +V SWK G + + F H +LG + + + RK I +
Sbjct: 189 DSSDLEFIVYDSWKISGKTAENTFNKTHTFHFLLGSIQGECPVPKPRIERPRKVRMIEEQ 248
Query: 242 RSRPTESYRPTEVEDNVSEEKTDTDKNMGIMFGILRRNKTVKLE--HLILNRKSFAQTVE 288
++ P + R E +E+ + ++ +G++ + + + +++ SF +TVE
Sbjct: 249 QAMPAQLKRMEESHQEATEK--EVERILGLLQTYFQEDPDTPMSFFDFVVDPHSFPRTVE 308
BLAST of Cp4.1LG18g01420 vs. TrEMBL
Match:
A0A0A0LZJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G605680 PE=4 SV=1)
HSP 1 Score: 642.1 bits (1655), Expect = 4.9e-181
Identity = 352/447 (78.75%), Postives = 373/447 (83.45%), Query Frame = 1
Query: 1 MRPVKRESAASSRTNRSRGG-------AVAVDAASLRGVKRERMVAREREKSGVDNTTEE 60
MRPVKRE S+R+NR+RGG AVD ASLR KRER VARERE SG +N EE
Sbjct: 1 MRPVKREPTVSTRSNRNRGGDGGGGGGGGAVDGASLRDSKRER-VARERENSGEENMNEE 60
Query: 61 EEGQQELSKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVA 120
GQQ+L+KRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVA
Sbjct: 61 V-GQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVA 120
Query: 121 DAEALQDIASSLMTSIRSQSNEGVTPSDFVSCLLREFADINGNITSEENDLVSVSWKDIG 180
DAEALQDIA+SL+TSIRSQSNEGVTPSDFVSCLLREFADING+I SEE DLVSV+WKDIG
Sbjct: 121 DAEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINGSINSEEQDLVSVNWKDIG 180
Query: 181 LSVSSIFMNGHGCRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPTEVEDNVSEEKTDTD 240
LSVSSIFMNG+GCRTMLGPMSNQLKQRKT N+ RKR RPTES RP EVEDN SE KTDTD
Sbjct: 181 LSVSSIFMNGYGCRTMLGPMSNQLKQRKTNNVPRKRVRPTESSRPAEVEDNGSEPKTDTD 240
Query: 241 KNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDENGSHFVC 300
KNMGIMFGILRRNKTVKLEHLILNRKSF QTVENLFALSFLVKDGRA ITID+NGSHFV
Sbjct: 241 KNMGIMFGILRRNKTVKLEHLILNRKSFGQTVENLFALSFLVKDGRAEITIDKNGSHFV- 300
Query: 301 EYLQTKRFMLLFENIVFFVVYLHSLPTFSAPKNAPAHSAIMSHEVNYSHFVFRFDFKDWK 360
+PKNAPAHSAIMSHEVNYSHFVFRFD+KDWK
Sbjct: 301 -----------------------------SPKNAPAHSAIMSHEVNYSHFVFRFDYKDWK 360
Query: 361 PMVDMVPVGDELMPHRNILNSAQVPQAEASTDDSEAAALPTTPIRKLSRNRGLVMQSVVE 420
PMVDMVPVG+ELMPHR LNS QV Q E + D+SE+A LPTTPIRKLSRNRGLVMQSVVE
Sbjct: 361 PMVDMVPVGEELMPHRTFLNSVQVSQEEVAADNSESAGLPTTPIRKLSRNRGLVMQSVVE 415
Query: 421 DSPDNGAHSGATAILRCKRKLNQGMVN 441
DSPDNG+ SGATAILR KRKL+QG VN
Sbjct: 421 DSPDNGSQSGATAILRGKRKLSQGWVN 415
BLAST of Cp4.1LG18g01420 vs. TrEMBL
Match:
A0A061GTF7_THECC (Non-structural maintenance of chromosome element 4, putative isoform 2 OS=Theobroma cacao GN=TCM_040402 PE=4 SV=1)
HSP 1 Score: 399.4 bits (1025), Expect = 5.5e-108
Identity = 230/444 (51.80%), Postives = 307/444 (69.14%), Query Frame = 1
Query: 1 MRPVKRESAASSRTNRSRGGAVAVDAASLRGVKRERMVAREREKSGVDNTTEEEEGQQEL 60
MR VK+E A D A+ VAR D +++ Q++
Sbjct: 1 MRSVKKEKRA--------------DKANEEAKPLRTRVARPARHDSADVESDQLSRQEDA 60
Query: 61 SKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAEALQ 120
+ RR+LRS+YLAV+ +I++ R+++SK D +KFN+IINEV+ LH+QV KPREQVADAEAL
Sbjct: 61 ANRRLLRSKYLAVMTKINDARDEISKVDSNKFNIIINEVDNLHQQVSKPREQVADAEALL 120
Query: 121 DIASSLMTSIRSQSNEGVTPSDFVSCLLREFADINGNITSEENDLVSVSWKDIGLSVSSI 180
DIA++L TS++S S EGV+ +D+V+CL+REF N ++ ++EN+ +SV+WKDIG++VS
Sbjct: 121 DIANTLATSVKSISCEGVSLADYVNCLVREFGKSNRSLDTQENEQISVNWKDIGMAVSPF 180
Query: 181 FMNGHGCRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPTEVEDNVSEEKTDTDKNMGIM 240
F G TMLGPM N+LKQRK+ ++ RPT++ RP EV+D +EEKTDTDKNM M
Sbjct: 181 FTTCKGICTMLGPMKNELKQRKSIVTRKRAIRPTDTARPEEVDDTGAEEKTDTDKNMATM 240
Query: 241 FGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDENGSHFVCEYLQ-- 300
F ILRR + VKLE LILNR SFAQTVENLFALSFLVKDGRA I +D++GSH VC+Y+
Sbjct: 241 FEILRRKRQVKLESLILNRSSFAQTVENLFALSFLVKDGRAEIVVDKSGSHIVCKYISRQ 300
Query: 301 -----TKRFMLLFENIVFFVVYLHSLPTFSAPKNAPAHSAIMSHEVNYSHFVFRFDFKDW 360
T+ F+ + + ++++Y SAPKNAP ++ + EV YSHFVFRFDFKDW
Sbjct: 301 LICNLTEIFVCVLHRLSYWLIYFF----LSAPKNAPGTMSVTTGEVTYSHFVFRFDFKDW 360
Query: 361 KPMVDMVPVGDELMPHRNILNSAQVPQAEASTDDSEAAALPTTPIRKLSRNRGLVMQ-SV 420
K M+ VPVG+ELMPHR +S + +AE++ ++SE AL TTPIRKLSRNRGLV+Q S+
Sbjct: 361 KLMMSGVPVGEELMPHREESHSI-LSKAESAANNSE-GALTTTPIRKLSRNRGLVLQESI 420
Query: 421 VEDSPDNGAHSGATAILRCKRKLN 436
VEDSP+ S I RC+RKLN
Sbjct: 421 VEDSPEIDDGSKGPGIRRCRRKLN 424
BLAST of Cp4.1LG18g01420 vs. TrEMBL
Match:
M5VYK3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006782mg PE=4 SV=1)
HSP 1 Score: 397.9 bits (1021), Expect = 1.6e-107
Identity = 235/431 (54.52%), Postives = 293/431 (67.98%), Query Frame = 1
Query: 7 ESAASSRTNRSRGGAVAVDAASLRGVKRERMVAREREKSGVDNTTEEEEGQQELSKRRVL 66
+SA RT RS+ G V DA LR VKRER+ A +G + +Q+ +RR L
Sbjct: 3 KSAKRQRT-RSQSGDVD-DAEQLRAVKRERVNAN----AGRVENESDLPSEQDSVQRRTL 62
Query: 67 RSRYLAVIHEISERREDL-SKDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIASSL 126
RS YLAV + ISE+R+DL + ++F +IIN+VEKLHEQVQKPREQVADAEAL DI ++L
Sbjct: 63 RSDYLAVKNLISEKRDDLMCPESERFCLIINKVEKLHEQVQKPREQVADAEALLDITNTL 122
Query: 127 MTSIRSQSNEGVTPSDFVSCLLREFADINGNITSEENDLVSVSWKDIGLSVSSIFMNGHG 186
TS++SQS+ G++PSDFV+C+L F +N ++ S+E+ VS+ WKDIGL+V+ IF HG
Sbjct: 123 WTSVKSQSSAGISPSDFVTCVLNNFKQLNSSLASQEDAPVSIKWKDIGLAVAPIFKRAHG 182
Query: 187 CRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPTEVEDNVSEEKTDTDKNMGIMFGILRR 246
C TMLGPM+ +LKQRK + K ++PT + RP E++D EEKTDTDKNM MF ILRR
Sbjct: 183 CCTMLGPMNTELKQRKAV-VRSKHAKPTTTDRPDEIDDTQGEEKTDTDKNMSTMFDILRR 242
Query: 247 NKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDENGSHFVCEYLQTKRFMLLF 306
NK V+LE LILNRKSFAQTVENLFALSFLVKDGRA IT+D NGSH V
Sbjct: 243 NKRVRLEGLILNRKSFAQTVENLFALSFLVKDGRAEITVDANGSHLV------------- 302
Query: 307 ENIVFFVVYLHSLPTFSAPKNAPAHSAIMSHEVNYSHFVFRFDFKDWKPMVDMVPVGDEL 366
+P+NAPA + + S EV Y HFVFRFDFKDWK M DM+PVG+EL
Sbjct: 303 -----------------SPRNAPAANLVASREVVYDHFVFRFDFKDWKLMKDMLPVGEEL 362
Query: 367 MPHRNILNSAQVPQAEASTDDSEAAALPTTPIRKLSRNRGLVMQ--SVVEDSPDNGAHSG 426
MPHR+ NS Q E + S+ ALPTTPIRKLSRNRG ++Q SVVE+SP+N +G
Sbjct: 363 MPHRSPPNSLPASQEEPAAYSSQ-TALPTTPIRKLSRNRGRLVQEESVVEESPENDDAAG 395
Query: 427 ATAILRCKRKL 435
+ R KRKL
Sbjct: 423 TNVVRRSKRKL 395
BLAST of Cp4.1LG18g01420 vs. TrEMBL
Match:
V4TZZ5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015454mg PE=4 SV=1)
HSP 1 Score: 395.6 bits (1015), Expect = 8.0e-107
Identity = 230/442 (52.04%), Postives = 299/442 (67.65%), Query Frame = 1
Query: 2 RPVKRESAASSRTNRSRGGAVAVDAAS---LRGVKRERMVAREREKSGVDNTTEEEEGQQ 61
R VKRE+ +SSR VD +S LR VKRE++ +R +DN + Q
Sbjct: 3 RAVKREAGSSSRGR--------VDDSSEQLLRTVKREKL-SRNGADENLDNESTRTNQPQ 62
Query: 62 ELSKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAEA 121
+ +RRVLRS+YLAV+ +I ++R+DL++ D KFN I+ EV+ LH VQKPREQVADAEA
Sbjct: 63 DTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAEA 122
Query: 122 LQDIASSLMTSIRSQSNEGVTPSDFVSCLLREFADINGNITSEE---NDLVSVSWKDIGL 181
L DI S+L+TS++SQSNEGVTP+DFVSCLL F + N N S + N +S++WKD+GL
Sbjct: 123 LLDITSTLVTSVKSQSNEGVTPTDFVSCLLTMFGESNSNRLSSQGNNNAQMSINWKDVGL 182
Query: 182 SVSSIFMNGHGCRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPTEVEDNVSEEKTDTDK 241
+VS HGC TMLGPM ++KQRK + +KR +PT++ +P EV+D+ + EKTDTDK
Sbjct: 183 AVSPFLSACHGCSTMLGPMKTEVKQRKVV-VRKKREKPTQTAQPEEVDDSEAVEKTDTDK 242
Query: 242 NMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDENGSHFVCE 301
NM MF ILRR K+V+LE LILNR+SFAQTVENLFALSFLVKDGR I ++E+G H V
Sbjct: 243 NMTTMFEILRRKKSVRLESLILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLV-- 302
Query: 302 YLQTKRFMLLFENIVFFVVYLHSLPTFSAPKNAPAHSAIMSHEVNYSHFVFRFDFKDWKP 361
AP+NAP+ ++MS +V YSHFVFR+DFKDWK
Sbjct: 303 ----------------------------APRNAPSADSVMSGQVKYSHFVFRYDFKDWKL 362
Query: 362 MVDMVPVGDELMPHRNILNSAQVPQAEASTDDSEAAALPTTPIRKLSRNRGLVM--QSVV 421
M D+VP G+ELMPHR N+ VPQAE ++ ++ A TTPIRKLSRNRGLV+ +SVV
Sbjct: 363 MKDVVPAGEELMPHRESSNALPVPQAEQASYNNTEGASRTTPIRKLSRNRGLVIREESVV 404
Query: 422 EDSPDNGAHSGATAILRCKRKL 435
EDSP++ +T +LRCKRK+
Sbjct: 423 EDSPEDDVAERSTRMLRCKRKI 404
BLAST of Cp4.1LG18g01420 vs. TrEMBL
Match:
A0A067EZQ6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015540mg PE=4 SV=1)
HSP 1 Score: 395.6 bits (1015), Expect = 8.0e-107
Identity = 230/442 (52.04%), Postives = 299/442 (67.65%), Query Frame = 1
Query: 2 RPVKRESAASSRTNRSRGGAVAVDAAS---LRGVKRERMVAREREKSGVDNTTEEEEGQQ 61
R VKRE+ +SSR VD +S LR VKRE++ +R +DN + Q
Sbjct: 3 RAVKREAGSSSRGR--------VDDSSEQLLRTVKREKL-SRNGADENLDNESTRTNQPQ 62
Query: 62 ELSKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAEA 121
+ +RRVLRS+YLAV+ +I ++R+DL++ D KFN I+ EV+ LH VQKPREQVADAEA
Sbjct: 63 DTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAEA 122
Query: 122 LQDIASSLMTSIRSQSNEGVTPSDFVSCLLREFADINGNITSEE---NDLVSVSWKDIGL 181
L DI S+L+TS++SQSNEGVTP+DFVSCLL F + N N S + N +S++WKD+GL
Sbjct: 123 LLDITSTLVTSVKSQSNEGVTPTDFVSCLLTMFGESNSNRLSSQGNNNAQMSINWKDVGL 182
Query: 182 SVSSIFMNGHGCRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPTEVEDNVSEEKTDTDK 241
+VS HGC TMLGPM ++KQRK + +KR +PT++ +P EV+D+ + EKTDTDK
Sbjct: 183 AVSPFLSACHGCSTMLGPMKTEVKQRKVV-VRKKREKPTQTAQPEEVDDSEAVEKTDTDK 242
Query: 242 NMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDENGSHFVCE 301
NM MF ILRR K+V+LE LILNR+SFAQTVENLFALSFLVKDGR I ++E+G H V
Sbjct: 243 NMTTMFEILRRKKSVRLESLILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLV-- 302
Query: 302 YLQTKRFMLLFENIVFFVVYLHSLPTFSAPKNAPAHSAIMSHEVNYSHFVFRFDFKDWKP 361
AP+NAP+ ++MS +V YSHFVFR+DFKDWK
Sbjct: 303 ----------------------------APRNAPSADSVMSGQVKYSHFVFRYDFKDWKL 362
Query: 362 MVDMVPVGDELMPHRNILNSAQVPQAEASTDDSEAAALPTTPIRKLSRNRGLVM--QSVV 421
M D+VP G+ELMPHR N+ VPQAE ++ ++ A TTPIRKLSRNRGLV+ +SVV
Sbjct: 363 MKDVVPAGEELMPHRESSNALPVPQAEQASYNNTEGASRTTPIRKLSRNRGLVIREESVV 404
Query: 422 EDSPDNGAHSGATAILRCKRKL 435
EDSP++ +T +LRCKRK+
Sbjct: 423 EDSPEDDVAERSTRMLRCKRKI 404
BLAST of Cp4.1LG18g01420 vs. TAIR10
Match:
AT1G51130.1 (AT1G51130.1 Nse4, component of Smc5/6 DNA repair complex)
HSP 1 Score: 353.2 bits (905), Expect = 2.3e-97
Identity = 215/439 (48.97%), Postives = 281/439 (64.01%), Query Frame = 1
Query: 2 RPVKRESAASSRTNRSRGGAVAVD--AASLRGVKRERMVAREREKSGVDNTTEEEEGQQE 61
+ VKRES A+ GG D LR VK+E+ E + D +E +Q
Sbjct: 3 KTVKRESEAT-------GGKREADDEPEKLRSVKKEKQRKTEADSVRPDEPPPPQEEEQG 62
Query: 62 LSKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAEAL 121
+S RR+LRS+YL++ +EI++ ++DL K D DKF+ IIN VE LH+QV+KPREQ+ADAEAL
Sbjct: 63 ISDRRILRSKYLSLQNEINDCKDDLMKIDSDKFSRIINAVENLHQQVRKPREQIADAEAL 122
Query: 122 QDIASSLMTSIRSQSNEGVTPSDFVSCLLREFADINGNITSEENDLVSVSWKDIGLSVSS 181
DIA++LM+S++SQS GV+P++FV+ L+ F + I ++E VS+ WKD+G +V S
Sbjct: 123 LDIANTLMSSVKSQSAHGVSPAEFVNALISGFGQGSLGIDTDETAQVSLKWKDLGFAVCS 182
Query: 182 IFMNGHGCRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPTEVEDNVSEEKTDTDKNMGI 241
+ GC TMLGPM +LKQRK +RKR++P E RP EV+D+ SEEKTDTDKNM I
Sbjct: 183 TVLVSCGCSTMLGPMDTELKQRKRAP-NRKRTKPGEGVRPDEVDDSQSEEKTDTDKNMTI 242
Query: 242 MFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDENGSHFVCEYLQT 301
MF IL + K V+LE+L+LNR+SFAQTVENLFALSFL KDGR I +D++GSH
Sbjct: 243 MFNILGKKKRVQLENLVLNRRSFAQTVENLFALSFLAKDGRVEIIVDKSGSH-------- 302
Query: 302 KRFMLLFENIVFFVVYLHSLPTFSAPKNAPAHSAIMSHEVNYSHFVFRFDFKDWKPMVDM 361
F+ P+NAP + +MS EV Y+HFVFR DFKDWK M +M
Sbjct: 303 ----------------------FAMPRNAPDANVVMSGEVIYNHFVFRLDFKDWKLMSEM 362
Query: 362 VPVGDELMPHR-NILNSAQVPQAEASTDDSEAAALPTTPIRKLSRNRGLVMQ--SVVEDS 421
VP+G+ELMPHR + S+ P A A TTPIRKLSRNRGLV+Q +VVED+
Sbjct: 363 VPLGEELMPHRQTAVASSSCPAASAPASADFTQDTQTTPIRKLSRNRGLVVQEETVVEDT 400
Query: 422 PDNGAHSGATAILRCKRKL 435
PD G RCKR+L
Sbjct: 423 PDK---EGDGTRRRCKRRL 400
BLAST of Cp4.1LG18g01420 vs. TAIR10
Match:
AT3G20760.1 (AT3G20760.1 Nse4, component of Smc5/6 DNA repair complex)
HSP 1 Score: 308.9 bits (790), Expect = 5.0e-84
Identity = 173/367 (47.14%), Postives = 244/367 (66.49%), Query Frame = 1
Query: 53 EEEGQQELSKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQ 112
+EE +Q ++ RR +RS+YLA+ H+I + ++DL+K D +KFN IINEVE LH++V+KPREQ
Sbjct: 52 QEEEEQGIADRRAIRSQYLALTHKIKDAKDDLTKIDSNKFNSIINEVENLHQKVRKPREQ 111
Query: 113 VADAEALQDIASSLMTSIRSQS-NEGVTPSDFVSCLLREFADINGNITSEENDLVSVSWK 172
+ADAEAL D+ +S+++S++SQS + GV+P++FV+ L+ F + I ++EN VS+ WK
Sbjct: 112 IADAEALLDLTNSVVSSVKSQSAHGGVSPAEFVNALINGFGKTSLRIDADENTQVSMKWK 171
Query: 173 DIGLSVSSIFMNGHGCRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPTEVEDNVSEEKT 232
D+G +V S + GC TM+GPM +++KQRK+ +RKR++P +P EV+D +E+K+
Sbjct: 172 DLGFTVCSTVLVSCGCTTMMGPMYSEMKQRKSRVGNRKRTKPGAGVKPEEVDDTEAEKKS 231
Query: 233 DTDKNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDENGSH 292
DTD NM +MF ILR+NK VK+E+L+LNRKSFAQT EN+FALSFLVKDGR IT+D NGSH
Sbjct: 232 DTDNNMAVMFNILRKNKRVKIENLVLNRKSFAQTAENMFALSFLVKDGRVEITVDNNGSH 291
Query: 293 FVCEYLQTKRFMLLFENIVFFVVYLHSLPTFSAPKNAPAHSAIMSHEVNYSHFVFRFDFK 352
FV P+NAPA + ++S EV Y+HFV RFD+K
Sbjct: 292 FV------------------------------EPRNAPAANLVLSGEVAYNHFVLRFDYK 351
Query: 353 DWKPMVDMVPVGDELMPHRNILNSAQVPQAEASTDDSEAAALPTTPIRKLSRNRGLVMQ- 412
DW+PM MV VG+ELMP R + + + D E LSR +G V+Q
Sbjct: 352 DWEPMSKMVAVGEELMPLR---------ETKVAQDSIE-----------LSRKQGSVIQE 368
Query: 413 -SVVEDS 416
+VVEDS
Sbjct: 412 ETVVEDS 368
BLAST of Cp4.1LG18g01420 vs. NCBI nr
Match:
gi|449462613|ref|XP_004149035.1| (PREDICTED: non-structural maintenance of chromosomes element 4 homolog A-like [Cucumis sativus])
HSP 1 Score: 642.1 bits (1655), Expect = 7.0e-181
Identity = 352/447 (78.75%), Postives = 373/447 (83.45%), Query Frame = 1
Query: 1 MRPVKRESAASSRTNRSRGG-------AVAVDAASLRGVKRERMVAREREKSGVDNTTEE 60
MRPVKRE S+R+NR+RGG AVD ASLR KRER VARERE SG +N EE
Sbjct: 1 MRPVKREPTVSTRSNRNRGGDGGGGGGGGAVDGASLRDSKRER-VARERENSGEENMNEE 60
Query: 61 EEGQQELSKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVA 120
GQQ+L+KRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVA
Sbjct: 61 V-GQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVA 120
Query: 121 DAEALQDIASSLMTSIRSQSNEGVTPSDFVSCLLREFADINGNITSEENDLVSVSWKDIG 180
DAEALQDIA+SL+TSIRSQSNEGVTPSDFVSCLLREFADING+I SEE DLVSV+WKDIG
Sbjct: 121 DAEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINGSINSEEQDLVSVNWKDIG 180
Query: 181 LSVSSIFMNGHGCRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPTEVEDNVSEEKTDTD 240
LSVSSIFMNG+GCRTMLGPMSNQLKQRKT N+ RKR RPTES RP EVEDN SE KTDTD
Sbjct: 181 LSVSSIFMNGYGCRTMLGPMSNQLKQRKTNNVPRKRVRPTESSRPAEVEDNGSEPKTDTD 240
Query: 241 KNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDENGSHFVC 300
KNMGIMFGILRRNKTVKLEHLILNRKSF QTVENLFALSFLVKDGRA ITID+NGSHFV
Sbjct: 241 KNMGIMFGILRRNKTVKLEHLILNRKSFGQTVENLFALSFLVKDGRAEITIDKNGSHFV- 300
Query: 301 EYLQTKRFMLLFENIVFFVVYLHSLPTFSAPKNAPAHSAIMSHEVNYSHFVFRFDFKDWK 360
+PKNAPAHSAIMSHEVNYSHFVFRFD+KDWK
Sbjct: 301 -----------------------------SPKNAPAHSAIMSHEVNYSHFVFRFDYKDWK 360
Query: 361 PMVDMVPVGDELMPHRNILNSAQVPQAEASTDDSEAAALPTTPIRKLSRNRGLVMQSVVE 420
PMVDMVPVG+ELMPHR LNS QV Q E + D+SE+A LPTTPIRKLSRNRGLVMQSVVE
Sbjct: 361 PMVDMVPVGEELMPHRTFLNSVQVSQEEVAADNSESAGLPTTPIRKLSRNRGLVMQSVVE 415
Query: 421 DSPDNGAHSGATAILRCKRKLNQGMVN 441
DSPDNG+ SGATAILR KRKL+QG VN
Sbjct: 421 DSPDNGSQSGATAILRGKRKLSQGWVN 415
BLAST of Cp4.1LG18g01420 vs. NCBI nr
Match:
gi|659100485|ref|XP_008451119.1| (PREDICTED: non-structural maintenance of chromosomes element 4 homolog A [Cucumis melo])
HSP 1 Score: 638.3 bits (1645), Expect = 1.0e-179
Identity = 348/440 (79.09%), Postives = 374/440 (85.00%), Query Frame = 1
Query: 1 MRPVKRESAASSRTNRSRGG---AVAVDAASLRGVKRERMVAREREKSGVDNTTEEEEGQ 60
MRPVKRE S+R+ R+RGG AVD ASLR KRER VARERE SG +N +EE GQ
Sbjct: 1 MRPVKREPTVSTRSKRNRGGDGGGGAVDGASLRDSKRER-VARERENSGEENMSEEV-GQ 60
Query: 61 QELSKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEA 120
Q+L+KRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEA
Sbjct: 61 QDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEA 120
Query: 121 LQDIASSLMTSIRSQSNEGVTPSDFVSCLLREFADINGNITSEENDLVSVSWKDIGLSVS 180
LQDIA+SL+TSIRSQSNEGVTPSDFVSCLLREFADING+I SEE +LVSV+WKDIGLSVS
Sbjct: 121 LQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINGSINSEEQELVSVNWKDIGLSVS 180
Query: 181 SIFMNGHGCRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPTEVEDNVSEEKTDTDKNMG 240
SIFMNG+GCRTMLGPMSNQLKQRKT N+ RKRS+PTES RP EVEDN SE KTDTDKNMG
Sbjct: 181 SIFMNGYGCRTMLGPMSNQLKQRKTNNVPRKRSKPTESSRPAEVEDNGSEPKTDTDKNMG 240
Query: 241 IMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDENGSHFVCEYLQ 300
IMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRA ITID+NGSHFV
Sbjct: 241 IMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFV----- 300
Query: 301 TKRFMLLFENIVFFVVYLHSLPTFSAPKNAPAHSAIMSHEVNYSHFVFRFDFKDWKPMVD 360
+PKNAPAHSAIMSHEVNYSHFVFRFD+KDWKPMV+
Sbjct: 301 -------------------------SPKNAPAHSAIMSHEVNYSHFVFRFDYKDWKPMVN 360
Query: 361 MVPVGDELMPHRNILNSAQVPQAEASTDDSEAAALPTTPIRKLSRNRGLVMQSVVEDSPD 420
MVPVG+ELMPHRN LNS V + EA+ DDSE+A+LPTTPIRKLSRNRGLVMQSVVEDSPD
Sbjct: 361 MVPVGEELMPHRNFLNSVPVSEEEATADDSESASLPTTPIRKLSRNRGLVMQSVVEDSPD 408
Query: 421 NGAHSGATAILRCKRKLNQG 438
NG+ SG TAILR KRKL+QG
Sbjct: 421 NGSQSGPTAILRGKRKLSQG 408
BLAST of Cp4.1LG18g01420 vs. NCBI nr
Match:
gi|590583229|ref|XP_007014843.1| (Non-structural maintenance of chromosome element 4, putative isoform 2 [Theobroma cacao])
HSP 1 Score: 399.4 bits (1025), Expect = 7.9e-108
Identity = 230/444 (51.80%), Postives = 307/444 (69.14%), Query Frame = 1
Query: 1 MRPVKRESAASSRTNRSRGGAVAVDAASLRGVKRERMVAREREKSGVDNTTEEEEGQQEL 60
MR VK+E A D A+ VAR D +++ Q++
Sbjct: 1 MRSVKKEKRA--------------DKANEEAKPLRTRVARPARHDSADVESDQLSRQEDA 60
Query: 61 SKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAEALQ 120
+ RR+LRS+YLAV+ +I++ R+++SK D +KFN+IINEV+ LH+QV KPREQVADAEAL
Sbjct: 61 ANRRLLRSKYLAVMTKINDARDEISKVDSNKFNIIINEVDNLHQQVSKPREQVADAEALL 120
Query: 121 DIASSLMTSIRSQSNEGVTPSDFVSCLLREFADINGNITSEENDLVSVSWKDIGLSVSSI 180
DIA++L TS++S S EGV+ +D+V+CL+REF N ++ ++EN+ +SV+WKDIG++VS
Sbjct: 121 DIANTLATSVKSISCEGVSLADYVNCLVREFGKSNRSLDTQENEQISVNWKDIGMAVSPF 180
Query: 181 FMNGHGCRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPTEVEDNVSEEKTDTDKNMGIM 240
F G TMLGPM N+LKQRK+ ++ RPT++ RP EV+D +EEKTDTDKNM M
Sbjct: 181 FTTCKGICTMLGPMKNELKQRKSIVTRKRAIRPTDTARPEEVDDTGAEEKTDTDKNMATM 240
Query: 241 FGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDENGSHFVCEYLQ-- 300
F ILRR + VKLE LILNR SFAQTVENLFALSFLVKDGRA I +D++GSH VC+Y+
Sbjct: 241 FEILRRKRQVKLESLILNRSSFAQTVENLFALSFLVKDGRAEIVVDKSGSHIVCKYISRQ 300
Query: 301 -----TKRFMLLFENIVFFVVYLHSLPTFSAPKNAPAHSAIMSHEVNYSHFVFRFDFKDW 360
T+ F+ + + ++++Y SAPKNAP ++ + EV YSHFVFRFDFKDW
Sbjct: 301 LICNLTEIFVCVLHRLSYWLIYFF----LSAPKNAPGTMSVTTGEVTYSHFVFRFDFKDW 360
Query: 361 KPMVDMVPVGDELMPHRNILNSAQVPQAEASTDDSEAAALPTTPIRKLSRNRGLVMQ-SV 420
K M+ VPVG+ELMPHR +S + +AE++ ++SE AL TTPIRKLSRNRGLV+Q S+
Sbjct: 361 KLMMSGVPVGEELMPHREESHSI-LSKAESAANNSE-GALTTTPIRKLSRNRGLVLQESI 420
Query: 421 VEDSPDNGAHSGATAILRCKRKLN 436
VEDSP+ S I RC+RKLN
Sbjct: 421 VEDSPEIDDGSKGPGIRRCRRKLN 424
BLAST of Cp4.1LG18g01420 vs. NCBI nr
Match:
gi|595824841|ref|XP_007205305.1| (hypothetical protein PRUPE_ppa006782mg [Prunus persica])
HSP 1 Score: 397.9 bits (1021), Expect = 2.3e-107
Identity = 235/431 (54.52%), Postives = 293/431 (67.98%), Query Frame = 1
Query: 7 ESAASSRTNRSRGGAVAVDAASLRGVKRERMVAREREKSGVDNTTEEEEGQQELSKRRVL 66
+SA RT RS+ G V DA LR VKRER+ A +G + +Q+ +RR L
Sbjct: 3 KSAKRQRT-RSQSGDVD-DAEQLRAVKRERVNAN----AGRVENESDLPSEQDSVQRRTL 62
Query: 67 RSRYLAVIHEISERREDL-SKDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIASSL 126
RS YLAV + ISE+R+DL + ++F +IIN+VEKLHEQVQKPREQVADAEAL DI ++L
Sbjct: 63 RSDYLAVKNLISEKRDDLMCPESERFCLIINKVEKLHEQVQKPREQVADAEALLDITNTL 122
Query: 127 MTSIRSQSNEGVTPSDFVSCLLREFADINGNITSEENDLVSVSWKDIGLSVSSIFMNGHG 186
TS++SQS+ G++PSDFV+C+L F +N ++ S+E+ VS+ WKDIGL+V+ IF HG
Sbjct: 123 WTSVKSQSSAGISPSDFVTCVLNNFKQLNSSLASQEDAPVSIKWKDIGLAVAPIFKRAHG 182
Query: 187 CRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPTEVEDNVSEEKTDTDKNMGIMFGILRR 246
C TMLGPM+ +LKQRK + K ++PT + RP E++D EEKTDTDKNM MF ILRR
Sbjct: 183 CCTMLGPMNTELKQRKAV-VRSKHAKPTTTDRPDEIDDTQGEEKTDTDKNMSTMFDILRR 242
Query: 247 NKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDENGSHFVCEYLQTKRFMLLF 306
NK V+LE LILNRKSFAQTVENLFALSFLVKDGRA IT+D NGSH V
Sbjct: 243 NKRVRLEGLILNRKSFAQTVENLFALSFLVKDGRAEITVDANGSHLV------------- 302
Query: 307 ENIVFFVVYLHSLPTFSAPKNAPAHSAIMSHEVNYSHFVFRFDFKDWKPMVDMVPVGDEL 366
+P+NAPA + + S EV Y HFVFRFDFKDWK M DM+PVG+EL
Sbjct: 303 -----------------SPRNAPAANLVASREVVYDHFVFRFDFKDWKLMKDMLPVGEEL 362
Query: 367 MPHRNILNSAQVPQAEASTDDSEAAALPTTPIRKLSRNRGLVMQ--SVVEDSPDNGAHSG 426
MPHR+ NS Q E + S+ ALPTTPIRKLSRNRG ++Q SVVE+SP+N +G
Sbjct: 363 MPHRSPPNSLPASQEEPAAYSSQ-TALPTTPIRKLSRNRGRLVQEESVVEESPENDDAAG 395
Query: 427 ATAILRCKRKL 435
+ R KRKL
Sbjct: 423 TNVVRRSKRKL 395
BLAST of Cp4.1LG18g01420 vs. NCBI nr
Match:
gi|567907227|ref|XP_006445927.1| (hypothetical protein CICLE_v10015454mg [Citrus clementina])
HSP 1 Score: 395.6 bits (1015), Expect = 1.1e-106
Identity = 230/442 (52.04%), Postives = 299/442 (67.65%), Query Frame = 1
Query: 2 RPVKRESAASSRTNRSRGGAVAVDAAS---LRGVKRERMVAREREKSGVDNTTEEEEGQQ 61
R VKRE+ +SSR VD +S LR VKRE++ +R +DN + Q
Sbjct: 3 RAVKREAGSSSRGR--------VDDSSEQLLRTVKREKL-SRNGADENLDNESTRTNQPQ 62
Query: 62 ELSKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAEA 121
+ +RRVLRS+YLAV+ +I ++R+DL++ D KFN I+ EV+ LH VQKPREQVADAEA
Sbjct: 63 DTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAEA 122
Query: 122 LQDIASSLMTSIRSQSNEGVTPSDFVSCLLREFADINGNITSEE---NDLVSVSWKDIGL 181
L DI S+L+TS++SQSNEGVTP+DFVSCLL F + N N S + N +S++WKD+GL
Sbjct: 123 LLDITSTLVTSVKSQSNEGVTPTDFVSCLLTMFGESNSNRLSSQGNNNAQMSINWKDVGL 182
Query: 182 SVSSIFMNGHGCRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPTEVEDNVSEEKTDTDK 241
+VS HGC TMLGPM ++KQRK + +KR +PT++ +P EV+D+ + EKTDTDK
Sbjct: 183 AVSPFLSACHGCSTMLGPMKTEVKQRKVV-VRKKREKPTQTAQPEEVDDSEAVEKTDTDK 242
Query: 242 NMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDENGSHFVCE 301
NM MF ILRR K+V+LE LILNR+SFAQTVENLFALSFLVKDGR I ++E+G H V
Sbjct: 243 NMTTMFEILRRKKSVRLESLILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLV-- 302
Query: 302 YLQTKRFMLLFENIVFFVVYLHSLPTFSAPKNAPAHSAIMSHEVNYSHFVFRFDFKDWKP 361
AP+NAP+ ++MS +V YSHFVFR+DFKDWK
Sbjct: 303 ----------------------------APRNAPSADSVMSGQVKYSHFVFRYDFKDWKL 362
Query: 362 MVDMVPVGDELMPHRNILNSAQVPQAEASTDDSEAAALPTTPIRKLSRNRGLVM--QSVV 421
M D+VP G+ELMPHR N+ VPQAE ++ ++ A TTPIRKLSRNRGLV+ +SVV
Sbjct: 363 MKDVVPAGEELMPHRESSNALPVPQAEQASYNNTEGASRTTPIRKLSRNRGLVIREESVV 404
Query: 422 EDSPDNGAHSGATAILRCKRKL 435
EDSP++ +T +LRCKRK+
Sbjct: 423 EDSPEDDVAERSTRMLRCKRKI 404
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| NSE4A_ARATH | 4.1e-96 | 48.97 | Non-structural maintenance of chromosomes element 4 homolog A OS=Arabidopsis tha... | [more] |
| NSE4B_ARATH | 8.8e-83 | 47.14 | Non-structural maintenance of chromosomes element 4 homolog B OS=Arabidopsis tha... | [more] |
| NSE4_SCHPO | 1.1e-11 | 26.72 | Non-structural maintenance of chromosome element 4 OS=Schizosaccharomyces pombe ... | [more] |
| NSE4A_HUMAN | 2.6e-10 | 26.71 | Non-structural maintenance of chromosomes element 4 homolog A OS=Homo sapiens GN... | [more] |
| NSE4A_BOVIN | 1.4e-08 | 23.68 | Non-structural maintenance of chromosomes element 4 homolog A OS=Bos taurus GN=N... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LZJ0_CUCSA | 4.9e-181 | 78.75 | Uncharacterized protein OS=Cucumis sativus GN=Csa_1G605680 PE=4 SV=1 | [more] |
| A0A061GTF7_THECC | 5.5e-108 | 51.80 | Non-structural maintenance of chromosome element 4, putative isoform 2 OS=Theobr... | [more] |
| M5VYK3_PRUPE | 1.6e-107 | 54.52 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006782mg PE=4 SV=1 | [more] |
| V4TZZ5_9ROSI | 8.0e-107 | 52.04 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015454mg PE=4 SV=1 | [more] |
| A0A067EZQ6_CITSI | 8.0e-107 | 52.04 | Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015540mg PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G51130.1 | 2.3e-97 | 48.97 | Nse4, component of Smc5/6 DNA repair complex | [more] |
| AT3G20760.1 | 5.0e-84 | 47.14 | Nse4, component of Smc5/6 DNA repair complex | [more] |
