Cla004793.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla004793
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	EP300-interacting inhibitor of differentiation 3 (AHRD V1 **-- EID3_MOUSE); contains Interpro domain(s) IPR014854 Nse4
Location	Chr3 : 24091147 .. 24093582 (+)
Sequence length	1227

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCCTGTCAAACGAGAACCCACCTCCAGCAGCCGCAGTAATCGGAGTAGAGGCGGAGGCGATGACGGCGCTGTCGATGCTGCGAGTTTAAGGGATATTAAGCGGGAGAGGGTTGCTCGGGTGCGAGAGAACTCCGGCGAAGACAATACGACTGAAGAAGAAGTGGGTCAGCAAGACTTGACAAAACGGCGGGTCCTTCGCTCTCGGTATCTCGCTGTCATTCATGAGATTAGTGGTATGATGAATCTTTGCATTTTTTGAATACTGCTGGATTTTGAGATGTGGGTTTGATTTGTTTTTGTGTGTAATCGGTTTTTCTTTGTTTCTTGACTTTGAAGAAAGAAGAGAGGATTTGTCGAAGGATCTGGATAAGTTTAATGTTATCATCAATGAGGTGGAAAAGTTGCACGAGCAAGGTATTTCTGTAGTCTTTTCTTATTGCTGTCTTCATTGTAGAATTGTTGTCTCTATTATTTAAAATTTCCACCAAAGGAAAGCGTGCATCTTTGCCCTTTACCTCCGCATTCTTACATTCATACAAGTTTGTATGTCAATTTGAATATTCGTTGTTACTTTTCCCTTTGATATTGTCATCTATGTGACATGGTTGTGTTTTCATTTGGGTTTCAGTTCAAAAGCCAAGGGAACAAGTTGCAGATGCAGAAGCGTTGCAAGATATTGCAAACTCCCTCGTGACCTCTATTAGGTCTCAGTCAAATGAAGGTGTTACTCCATCAGATTTTGTCAGTTGTCTGCTCAGAGAGTTTGCTGACATTAACGTTAGTATGCAATCTGAAGAACAAGACCTGGTTTCTGTCAGTTGGAAAGATATTGGACTCAGTGTTTCGTCTATTTTCATGAATGGCCATGGATGCCGCACAATGTGAGATTTATGGATTCCTTTTTCCCACTATCCTGATGCTGAAGTGTCTTTAATTGATGTTTTTAGTCAATTATATAACTTTCTTTGTTGTGTGTGTGTGTGTGTGTTTTTTTTTCAAGGCTTGGACCTATGAGCAATCAGTTGAAGCAGCGAAAGACTAATAATATTTCCAGGAAACGTTCCAGGCCTACTGAAAGTTCTAGACCTGCAGAGGTTAGATCAAAAAGATTTTGATATTTTGAAGTATTTTGGTTTTAGGATTGAGTCATCTGTCTCTCTGTTCTGAGCTTTTGTTATTCTGTTGCTTTGACCTGATAAAGGCCTTGCTTTAAAAATTCCTAGTGCGGTCAACTTTTTCAGCACTCTATTACTTTGGAGGTTAACACCAGTACAGTTATTTCTTTCTTGGCCGGACTTACATCATTGAACTTTCTAATGTTTCAGCTGGACCTTAACAAAGTTTAAGGCTTGCTTGCAAGTTTGTTTTGAGTCACTCCTCAAGGCTTGCTTGCAAGTGTGTTTGGAGTCACTCCTCAAGGCTTGACATGATGTTCTTCGTTTAATATCTATTACATTTTTCTTTTGCTGAAGTGGTTTGTGAAATAGATTGCACTTTCTGTTTGTTTCTTATGAATTTGGCATGCTATTATCCCCTTGATGTTTGTTCCAATTCATACGTGCAGGTTGAAGATAATGGGTCCGAAGTAAAAACAGATACAGATAAGAACATGGGCATCATGTTTGGAATTTTGAGGAGGAATAAAACCGTTAAACTTGAACACTTGATATTGAATAGAAAGTCTTTTGCACAGACAGTAGAGAATTTATTTGCTCTGTCCTTTCTGGTTAAGGATGGTCGGGCTGAGATAACTATTGATAAAAATGGTTCTCACTTTGTGTGTGAGTAAACATCTACAAACTAAACGTTTTATGCTTTTGTTTGAAAGTATTTTGTTGTTTGCATTATGCTAACATTTTCTGCCAACGTTTTCAGCACCGAAGAATGCCCCTGCCCATAGTACCATTATGTCACATGAAGTTAATTACAGTCATTTTGTATTCAGATTCGATTACAAGGATTGGAAGGTACGGAGAAGCATTCATTTTTACGATAGTAACTTTGCATTTTGCGGTGTCTTGTAAAACAGATTTCAAATATTAAGAAAAATATTCTACCCTCTTGATTAGAGCGTATACAATATTGGATAGAGTCTCATGATATATACAAAATGCTGTGTGCTACCTAGATCCTTGCATCCAATTGAAGAACACATACTTGTGATGTTTATTTGCAGCCAATGGTGGATATGGTACCAGTTGGAGAGGAGCTGATGCCCCACAGGAACATTCTGAACTCAGAGCAGGTGTCCCAAGCAGAAGCAACGGCGGATGATTCTGAAGCGGCAGCCTTACCGACTACACCAATCCGAAAGCTGTCAAGAAATCGAGGTTTAGTTATCCAAACCGTTGTTGAAGATTCTCCTGATAATGGTTCTCATTCAGGTGCGACTGCAATTTTGAGGTGCAAGAGAAAGCTTAGTCAAGGTTAG

mRNA sequence

ATGAGGCCTGTCAAACGAGAACCCACCTCCAGCAGCCGCAGTAATCGGAGTAGAGGCGGAGGCGATGACGGCGCTGTCGATGCTGCGAGTTTAAGGGATATTAAGCGGGAGAGGGTTGCTCGGGTGCGAGAGAACTCCGGCGAAGACAATACGACTGAAGAAGAAGTGGGTCAGCAAGACTTGACAAAACGGCGGGTCCTTCGCTCTCGGTATCTCGCTGTCATTCATGAGATTAGTGAAAGAAGAGAGGATTTGTCGAAGGATCTGGATAAGTTTAATGTTATCATCAATGAGGTGGAAAAGTTGCACGAGCAAGTTCAAAAGCCAAGGGAACAAGTTGCAGATGCAGAAGCGTTGCAAGATATTGCAAACTCCCTCGTGACCTCTATTAGGTCTCAGTCAAATGAAGGTGTTACTCCATCAGATTTTGTCAGTTGTCTGCTCAGAGAGTTTGCTGACATTAACGTTAGTATGCAATCTGAAGAACAAGACCTGGTTTCTGTCAGTTGGAAAGATATTGGACTCAGTGTTTCGTCTATTTTCATGAATGGCCATGGATGCCGCACAATGCTTGGACCTATGAGCAATCAGTTGAAGCAGCGAAAGACTAATAATATTTCCAGGAAACGTTCCAGGCCTACTGAAAGTTCTAGACCTGCAGAGGTTGAAGATAATGGGTCCGAAGTAAAAACAGATACAGATAAGAACATGGGCATCATGTTTGGAATTTTGAGGAGGAATAAAACCGTTAAACTTGAACACTTGATATTGAATAGAAAGTCTTTTGCACAGACAGTAGAGAATTTATTTGCTCTGTCCTTTCTGGTTAAGGATGGTCGGGCTGAGATAACTATTGATAAAAATGGTTCTCACTTTGTGTCACCGAAGAATGCCCCTGCCCATAGTACCATTATGTCACATGAAGTTAATTACAGTCATTTTGTATTCAGATTCGATTACAAGGATTGGAAGCCAATGGTGGATATGGTACCAGTTGGAGAGGAGCTGATGCCCCACAGGAACATTCTGAACTCAGAGCAGGTGTCCCAAGCAGAAGCAACGGCGGATGATTCTGAAGCGGCAGCCTTACCGACTACACCAATCCGAAAGCTGTCAAGAAATCGAGGTTTAGTTATCCAAACCGTTGTTGAAGATTCTCCTGATAATGGTTCTCATTCAGGTGCGACTGCAATTTTGAGGTGCAAGAGAAAGCTTAGTCAAGGTTAG

Coding sequence (CDS)

ATGAGGCCTGTCAAACGAGAACCCACCTCCAGCAGCCGCAGTAATCGGAGTAGAGGCGGAGGCGATGACGGCGCTGTCGATGCTGCGAGTTTAAGGGATATTAAGCGGGAGAGGGTTGCTCGGGTGCGAGAGAACTCCGGCGAAGACAATACGACTGAAGAAGAAGTGGGTCAGCAAGACTTGACAAAACGGCGGGTCCTTCGCTCTCGGTATCTCGCTGTCATTCATGAGATTAGTGAAAGAAGAGAGGATTTGTCGAAGGATCTGGATAAGTTTAATGTTATCATCAATGAGGTGGAAAAGTTGCACGAGCAAGTTCAAAAGCCAAGGGAACAAGTTGCAGATGCAGAAGCGTTGCAAGATATTGCAAACTCCCTCGTGACCTCTATTAGGTCTCAGTCAAATGAAGGTGTTACTCCATCAGATTTTGTCAGTTGTCTGCTCAGAGAGTTTGCTGACATTAACGTTAGTATGCAATCTGAAGAACAAGACCTGGTTTCTGTCAGTTGGAAAGATATTGGACTCAGTGTTTCGTCTATTTTCATGAATGGCCATGGATGCCGCACAATGCTTGGACCTATGAGCAATCAGTTGAAGCAGCGAAAGACTAATAATATTTCCAGGAAACGTTCCAGGCCTACTGAAAGTTCTAGACCTGCAGAGGTTGAAGATAATGGGTCCGAAGTAAAAACAGATACAGATAAGAACATGGGCATCATGTTTGGAATTTTGAGGAGGAATAAAACCGTTAAACTTGAACACTTGATATTGAATAGAAAGTCTTTTGCACAGACAGTAGAGAATTTATTTGCTCTGTCCTTTCTGGTTAAGGATGGTCGGGCTGAGATAACTATTGATAAAAATGGTTCTCACTTTGTGTCACCGAAGAATGCCCCTGCCCATAGTACCATTATGTCACATGAAGTTAATTACAGTCATTTTGTATTCAGATTCGATTACAAGGATTGGAAGCCAATGGTGGATATGGTACCAGTTGGAGAGGAGCTGATGCCCCACAGGAACATTCTGAACTCAGAGCAGGTGTCCCAAGCAGAAGCAACGGCGGATGATTCTGAAGCGGCAGCCTTACCGACTACACCAATCCGAAAGCTGTCAAGAAATCGAGGTTTAGTTATCCAAACCGTTGTTGAAGATTCTCCTGATAATGGTTCTCATTCAGGTGCGACTGCAATTTTGAGGTGCAAGAGAAAGCTTAGTCAAGGTTAG

Protein sequence

MRPVKREPTSSSRSNRSRGGGDDGAVDAASLRDIKRERVARVRENSGEDNTTEEEVGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATADDSEAAALPTTPIRKLSRNRGLVIQTVVEDSPDNGSHSGATAILRCKRKLSQG

Homology

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BLAST of Cla004793 vs. Swiss-Prot
Match: NSE4A_ARATH (Non-structural maintenance of chromosomes element 4 homolog A OS=Arabidopsis thaliana GN=NSE4A PE=2 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 9.9e-105
Identity = 207/399 (51.88%), Postives = 275/399 (68.92%), Query Frame = 1


Query: 13  RSNRSRGGGDDGAVDAASLRDIKRERVARVRENSGE-DNTTEEEVGQQDLTKRRVLRSRY 72
           R + + GG  +   +   LR +K+E+  +   +S   D     +  +Q ++ RR+LRS+Y
Sbjct: 7   RESEATGGKREADDEPEKLRSVKKEKQRKTEADSVRPDEPPPPQEEEQGISDRRILRSKY 66

Query: 73  LAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANSLVTSI 132
           L++ +EI++ ++DL K D DKF+ IIN VE LH+QV+KPREQ+ADAEAL DIAN+L++S+
Sbjct: 67  LSLQNEINDCKDDLMKIDSDKFSRIINAVENLHQQVRKPREQIADAEALLDIANTLMSSV 126

Query: 133 RSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVSSIFMNGHGCRTM 192
           +SQS  GV+P++FV+ L+  F   ++ + ++E   VS+ WKD+G +V S  +   GC TM
Sbjct: 127 KSQSAHGVSPAEFVNALISGFGQGSLGIDTDETAQVSLKWKDLGFAVCSTVLVSCGCSTM 186

Query: 193 LGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILRRNKTV 252
           LGPM  +LKQRK    +RKR++P E  RP EV+D+ SE KTDTDKNM IMF IL + K V
Sbjct: 187 LGPMDTELKQRKRAP-NRKRTKPGEGVRPDEVDDSQSEEKTDTDKNMTIMFNILGKKKRV 246

Query: 253 KLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIMSHEVN 312
           +LE+L+LNR+SFAQTVENLFALSFL KDGR EI +DK+GSHF  P+NAP  + +MS EV 
Sbjct: 247 QLENLVLNRRSFAQTVENLFALSFLAKDGRVEIIVDKSGSHFAMPRNAPDANVVMSGEVI 306

Query: 313 YSHFVFRFDYKDWKPMVDMVPVGEELMPHR-NILNSEQVSQAEATADDSEAAALPTTPIR 372
           Y+HFVFR D+KDWK M +MVP+GEELMPHR   + S     A A A         TTPIR
Sbjct: 307 YNHFVFRLDFKDWKLMSEMVPLGEELMPHRQTAVASSSCPAASAPASADFTQDTQTTPIR 366

Query: 373 KLSRNRGLVIQ--TVVEDSPDNGSHSGATAILRCKRKLS 407
           KLSRNRGLV+Q  TVVED+PD     G     RCKR+L+
Sbjct: 367 KLSRNRGLVVQEETVVEDTPDK---EGDGTRRRCKRRLT 401

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BLAST of Cla004793 vs. Swiss-Prot
Match: NSE4B_ARATH (Non-structural maintenance of chromosomes element 4 homolog B OS=Arabidopsis thaliana GN=NSE4B PE=2 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.5e-92
Identity = 186/390 (47.69%), Postives = 255/390 (65.38%), Query Frame = 1


Query: 1   MRPVKREPTSSSRSNRSRGGGDDGAVDAASLRDIKRERVARVRENSGEDNTTEEEVGQQD 60
           MR   +  T  +     R   D+ +     ++  KR +         +    EEE  +Q 
Sbjct: 1   MRNSVKWETELTGDRSRRREADESSETPKIVKKEKRSKTVIASLRPQQPPIQEEE--EQG 60

Query: 61  LTKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAEAL 120
           +  RR +RS+YLA+ H+I + ++DL+K D +KFN IINEVE LH++V+KPREQ+ADAEAL
Sbjct: 61  IADRRAIRSQYLALTHKIKDAKDDLTKIDSNKFNSIINEVENLHQKVRKPREQIADAEAL 120

Query: 121 QDIANSLVTSIRSQS-NEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVS 180
            D+ NS+V+S++SQS + GV+P++FV+ L+  F   ++ + ++E   VS+ WKD+G +V 
Sbjct: 121 LDLTNSVVSSVKSQSAHGGVSPAEFVNALINGFGKTSLRIDADENTQVSMKWKDLGFTVC 180

Query: 181 SIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMG 240
           S  +   GC TM+GPM +++KQRK+   +RKR++P    +P EV+D  +E K+DTD NM 
Sbjct: 181 STVLVSCGCTTMMGPMYSEMKQRKSRVGNRKRTKPGAGVKPEEVDDTEAEKKSDTDNNMA 240

Query: 241 IMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNA 300
           +MF ILR+NK VK+E+L+LNRKSFAQT EN+FALSFLVKDGR EIT+D NGSHFV P+NA
Sbjct: 241 VMFNILRKNKRVKIENLVLNRKSFAQTAENMFALSFLVKDGRVEITVDNNGSHFVEPRNA 300

Query: 301 PAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATADDS 360
           PA + ++S EV Y+HFV RFDYKDW+PM  MV VGEELMP R         + +   D  
Sbjct: 301 PAANLVLSGEVAYNHFVLRFDYKDWEPMSKMVAVGEELMPLR---------ETKVAQDSI 360

Query: 361 EAAALPTTPIRKLSRNRGLVIQ--TVVEDS 387
           E           LSR +G VIQ  TVVEDS
Sbjct: 361 E-----------LSRKQGSVIQEETVVEDS 368

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BLAST of Cla004793 vs. Swiss-Prot
Match: NSE4A_BOVIN (Non-structural maintenance of chromosomes element 4 homolog A OS=Bos taurus GN=NSMCE4A PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 6.6e-16
Identity = 83/378 (21.96%), Postives = 148/378 (39.15%), Query Frame = 1


Query: 10  SSSRSNRSRGGGDDGAVDAASLRDIKRERVA------------RVRENSGEDNTTEEEVG 69
           SS R    RG G D   D    R   R  ++               E  G ++T   + G
Sbjct: 5   SSGRRPEGRGRGRDPHRDRTRSRSRSRSPLSPGSRRGAAPERREAPERPGLEDTEPSDSG 64

Query: 70  QQ-----------DLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQV 129
            +           D +  R +R +Y A+I+ + + RED+    DK   ++ E   L   V
Sbjct: 65  DEMIDPASLEEETDPSLCRQIRHQYRALINSVQQNREDILNASDKLTEVLEEANTLFNGV 124

Query: 130 QKPREQVADAEAL---QDIANSLVTSIRSQSNE--------------GVTPSDFVSCLLR 189
            + RE V DA  L    D+       +RS  N               GV P +    +  
Sbjct: 125 SRAREAVLDAHFLVLASDLGKEKAKQLRSDLNSFDMLRYVETLLTHMGVNPLEAEELIRD 184

Query: 190 EFADINVSMQSEEQDLVSVSWKDIGLSVSSIFMNGHGCRTMLGPMSNQL--------KQR 249
           E +       S+ + +V  SWK  G +  + F   H    +LG +  +         + R
Sbjct: 185 EDS-------SDLEFIVYDSWKISGKTAENTFNKTHTFHFLLGSIQGECPVPKPRIERPR 244

Query: 250 KTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILRRNKTVKLE--HLILNR 309
           K   I  +++ P +  R  E     +E   + ++ +G++    + +    +     +++ 
Sbjct: 245 KVRMIEEQQAMPAQLKRMEESHQEATE--KEVERILGLLQTYFQEDPDTPMSFFDFVVDP 304

Query: 310 KSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIMSHEVNYSHFVFRFD 338
            SF +TVEN+F +SF+++DG A I +D++    + P N    S   +   N +  +    
Sbjct: 305 HSFPRTVENIFHVSFIIRDGFARIRLDRDRLPVIEPVNINEESGGNTQIRNQA--IIALS 364

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BLAST of Cla004793 vs. Swiss-Prot
Match: NSE4A_HUMAN (Non-structural maintenance of chromosomes element 4 homolog A OS=Homo sapiens GN=NSMCE4A PE=1 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 8.6e-16
Identity = 84/373 (22.52%), Postives = 151/373 (40.48%), Query Frame = 1


Query: 10  SSSRSNRSRGGGDDGAVDAASLRDIKRERV--------ARVRENSGE----DNTTEEEVG 69
           SS R    RG G D   D    R   R  +        AR R  + E    ++T   + G
Sbjct: 5   SSGRGPEGRGRGRDPHRDRTRSRSRSRSPLSPRSRRGSARERREAPERPSLEDTEPSDSG 64

Query: 70  QQ-----------DLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQV 129
            +           D    R +R +Y A+I+ + + RED+    DK   ++ E   L  +V
Sbjct: 65  DEMMDPASLEAEADQGLCRQIRHQYRALINSVQQNREDILNAGDKLTEVLEEANTLFNEV 124

Query: 130 QKPREQVADAEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINVS-MQSEE--- 189
            + RE V DA  L  +A+ L      Q    ++  D +  +      + V+ +++EE   
Sbjct: 125 SRAREAVLDAHFLV-LASDLGKEKAKQLRSDLSSFDMLRYVETLLTHMGVNPLEAEELIR 184

Query: 190 -------QDLVSVSWKDIGLSVSSIFMNGHGCRTMLG--------PMSNQLKQRKTNNIS 249
                  + +V  SWK  G +  + F   H    +LG        P     + RK   I 
Sbjct: 185 DEDSPDFEFIVYDSWKITGRTAENTFNKTHTFHFLLGSIYGECPVPKPRVDRPRKVPVIQ 244

Query: 250 RKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILRRNKTVKLE--HLILNRKSFAQT 309
            +R+ P +  R  E     +E   + ++ +G++    R +    +     +++  SF +T
Sbjct: 245 EERAMPAQLRRMEESHQEATE--KEVERILGLLQTYFREDPDTPMSFFDFVVDPHSFPRT 304

Query: 310 VENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIMSHEVNY-SHFVFRFDYKDWK 338
           VEN+F +SF+++DG A I +D++    + P +    +    H     +  +    Y+DW+
Sbjct: 305 VENIFHVSFIIRDGFARIRLDQDRLPVIEPVSINEENEGFEHNTQVRNQGIIALSYRDWE 364

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BLAST of Cla004793 vs. Swiss-Prot
Match: NSE4_SCHPO (Non-structural maintenance of chromosome element 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nse4 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.1e-13
Identity = 64/283 (22.61%), Postives = 126/283 (44.52%), Query Frame = 1


Query: 64  RRVLRSRYLAVIHEISERREDL-SKDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDI 123
           +R LR RY  +I+++ E R +L  ++ +     I     L   V  P E   DA  L   
Sbjct: 6   KRDLRKRYRNLINKVQESRLELVDEENNNLYETITTANDLFSSVDAPTEATLDALLLTKT 65

Query: 124 ANSLVTSIRSQSNEGVTPSDFVSCL---LREFADINVSMQSEEQ-DLVSVSWKDIGLSVS 183
            +  + SI+++      P   +      +++F +   S  +  +   +  +W  +G   S
Sbjct: 66  VD--LASIKARQLHIGRPKFNIELFTKNIKQFLNYPTSHSNVTRIQEIDTAWSRLGKLAS 125

Query: 184 SIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEV-EDNGSEVKTDTDKNM 243
           +          M+GP+S + K+R      R +  P   ++P  + E N +  + +T KN+
Sbjct: 126 NCEKQPASLNLMVGPLSFRKKERNIQRRERLQKAPNVLTQPTMLNERNITTQENNTTKNV 185

Query: 244 GIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKN 303
             +  +L+ ++ V     I N +S+ QTVENLF +SFL K+G+A +  +++G   +  + 
Sbjct: 186 LHISRLLQAHQPVNFLKFITNPQSYPQTVENLFYVSFLFKEGKAALVENESGILMLETRI 245

Query: 304 APAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHR 341
            P    +++ E+     V       ++ ++    + E ++P R
Sbjct: 246 PPTDDQVVAGEIRNIQLVLDMTMDLYENIIKEYNIKESIIPTR 286

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BLAST of Cla004793 vs. TrEMBL
Match: A0A0A0LZJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G605680 PE=4 SV=1)

HSP 1 Score: 717.6 bits (1851), Expect = 8.5e-204
Identity = 372/413 (90.07%), Postives = 383/413 (92.74%), Query Frame = 1


Query: 1   MRPVKREPTSSSRSNRSRGG-----GDDGAVDAASLRDIKRERVARVRENSGEDNTTEEE 60
           MRPVKREPT S+RSNR+RGG     G  GAVD ASLRD KRERVAR RENSGE+N   EE
Sbjct: 1   MRPVKREPTVSTRSNRNRGGDGGGGGGGGAVDGASLRDSKRERVARERENSGEENM-NEE 60

Query: 61  VGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVAD 120
           VGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVAD
Sbjct: 61  VGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVAD 120

Query: 121 AEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGL 180
           AEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADIN S+ SEEQDLVSV+WKDIGL
Sbjct: 121 AEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINGSINSEEQDLVSVNWKDIGL 180

Query: 181 SVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDK 240
           SVSSIFMNG+GCRTMLGPMSNQLKQRKTNN+ RKR RPTESSRPAEVEDNGSE KTDTDK
Sbjct: 181 SVSSIFMNGYGCRTMLGPMSNQLKQRKTNNVPRKRVRPTESSRPAEVEDNGSEPKTDTDK 240

Query: 241 NMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSP 300
           NMGIMFGILRRNKTVKLEHLILNRKSF QTVENLFALSFLVKDGRAEITIDKNGSHFVSP
Sbjct: 241 NMGIMFGILRRNKTVKLEHLILNRKSFGQTVENLFALSFLVKDGRAEITIDKNGSHFVSP 300

Query: 301 KNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATA 360
           KNAPAHS IMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHR  LNS QVSQ E  A
Sbjct: 301 KNAPAHSAIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRTFLNSVQVSQEEVAA 360

Query: 361 DDSEAAALPTTPIRKLSRNRGLVIQTVVEDSPDNGSHSGATAILRCKRKLSQG 409
           D+SE+A LPTTPIRKLSRNRGLV+Q+VVEDSPDNGS SGATAILR KRKLSQG
Sbjct: 361 DNSESAGLPTTPIRKLSRNRGLVMQSVVEDSPDNGSQSGATAILRGKRKLSQG 412

[Close]

BLAST of Cla004793 vs. TrEMBL
Match: M5VYK3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006782mg PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 9.9e-120
Identity = 239/402 (59.45%), Postives = 292/402 (72.64%), Query Frame = 1


Query: 8   PTSSSRSN-RSRGGGDDGAVDAASLRDIKRERVARVRENSGEDNTTEEEVGQQDLTKRRV 67
           P S+ R   RS+ G  D   DA  LR +KRERV     N+G      +   +QD  +RR 
Sbjct: 2   PKSAKRQRTRSQSGDVD---DAEQLRAVKRERV---NANAGRVENESDLPSEQDSVQRRT 61

Query: 68  LRSRYLAVIHEISERREDLS-KDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANS 127
           LRS YLAV + ISE+R+DL   + ++F +IIN+VEKLHEQVQKPREQVADAEAL DI N+
Sbjct: 62  LRSDYLAVKNLISEKRDDLMCPESERFCLIINKVEKLHEQVQKPREQVADAEALLDITNT 121

Query: 128 LVTSIRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVSSIFMNGH 187
           L TS++SQS+ G++PSDFV+C+L  F  +N S+ S+E   VS+ WKDIGL+V+ IF   H
Sbjct: 122 LWTSVKSQSSAGISPSDFVTCVLNNFKQLNSSLASQEDAPVSIKWKDIGLAVAPIFKRAH 181

Query: 188 GCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILR 247
           GC TMLGPM+ +LKQRK   +  K ++PT + RP E++D   E KTDTDKNM  MF ILR
Sbjct: 182 GCCTMLGPMNTELKQRKAV-VRSKHAKPTTTDRPDEIDDTQGEEKTDTDKNMSTMFDILR 241

Query: 248 RNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIM 307
           RNK V+LE LILNRKSFAQTVENLFALSFLVKDGRAEIT+D NGSH VSP+NAPA + + 
Sbjct: 242 RNKRVRLEGLILNRKSFAQTVENLFALSFLVKDGRAEITVDANGSHLVSPRNAPAANLVA 301

Query: 308 SHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATADDSEAAALPT 367
           S EV Y HFVFRFD+KDWK M DM+PVGEELMPHR+  NS   SQ E  A  S+  ALPT
Sbjct: 302 SREVVYDHFVFRFDFKDWKLMKDMLPVGEELMPHRSPPNSLPASQEEPAAYSSQ-TALPT 361

Query: 368 TPIRKLSRNRGLVIQ--TVVEDSPDNGSHSGATAILRCKRKL 406
           TPIRKLSRNRG ++Q  +VVE+SP+N   +G   + R KRKL
Sbjct: 362 TPIRKLSRNRGRLVQEESVVEESPENDDAAGTNVVRRSKRKL 395

[Close]

BLAST of Cla004793 vs. TrEMBL
Match: V4TZZ5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015454mg PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 3.3e-115
Identity = 228/413 (55.21%), Postives = 297/413 (71.91%), Query Frame = 1


Query: 2   RPVKREPTSSSRSNRSRGGGDDGAVDAAS---LRDIKRERVARVRENSGEDNTTEEEVGQ 61
           R VKRE  SSSR          G VD +S   LR +KRE+++R   +   DN +      
Sbjct: 3   RAVKREAGSSSR----------GRVDDSSEQLLRTVKREKLSRNGADENLDNESTRTNQP 62

Query: 62  QDLTKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAE 121
           QD  +RRVLRS+YLAV+ +I ++R+DL++ D  KFN I+ EV+ LH  VQKPREQVADAE
Sbjct: 63  QDTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAE 122

Query: 122 ALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADIN---VSMQSEEQDLVSVSWKDIG 181
           AL DI ++LVTS++SQSNEGVTP+DFVSCLL  F + N   +S Q      +S++WKD+G
Sbjct: 123 ALLDITSTLVTSVKSQSNEGVTPTDFVSCLLTMFGESNSNRLSSQGNNNAQMSINWKDVG 182

Query: 182 LSVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTD 241
           L+VS      HGC TMLGPM  ++KQRK   + +KR +PT++++P EV+D+ +  KTDTD
Sbjct: 183 LAVSPFLSACHGCSTMLGPMKTEVKQRKVV-VRKKREKPTQTAQPEEVDDSEAVEKTDTD 242

Query: 242 KNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVS 301
           KNM  MF ILRR K+V+LE LILNR+SFAQTVENLFALSFLVKDGR EI ++++G H V+
Sbjct: 243 KNMTTMFEILRRKKSVRLESLILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLVA 302

Query: 302 PKNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEAT 361
           P+NAP+  ++MS +V YSHFVFR+D+KDWK M D+VP GEELMPHR   N+  V QAE  
Sbjct: 303 PRNAPSADSVMSGQVKYSHFVFRYDFKDWKLMKDVVPAGEELMPHRESSNALPVPQAEQA 362

Query: 362 ADDSEAAALPTTPIRKLSRNRGLVI--QTVVEDSPDNGSHSGATAILRCKRKL 406
           + ++   A  TTPIRKLSRNRGLVI  ++VVEDSP++     +T +LRCKRK+
Sbjct: 363 SYNNTEGASRTTPIRKLSRNRGLVIREESVVEDSPEDDVAERSTRMLRCKRKI 404

[Close]

BLAST of Cla004793 vs. TrEMBL
Match: A0A067EZQ6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015540mg PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 3.3e-115
Identity = 228/413 (55.21%), Postives = 297/413 (71.91%), Query Frame = 1


Query: 2   RPVKREPTSSSRSNRSRGGGDDGAVDAAS---LRDIKRERVARVRENSGEDNTTEEEVGQ 61
           R VKRE  SSSR          G VD +S   LR +KRE+++R   +   DN +      
Sbjct: 3   RAVKREAGSSSR----------GRVDDSSEQLLRTVKREKLSRNGADENLDNESTRTNQP 62

Query: 62  QDLTKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAE 121
           QD  +RRVLRS+YLAV+ +I ++R+DL++ D  KFN I+ EV+ LH  VQKPREQVADAE
Sbjct: 63  QDTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAE 122

Query: 122 ALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADIN---VSMQSEEQDLVSVSWKDIG 181
           AL DI ++LVTS++SQSNEGVTP+DFVSCLL  F + N   +S Q      +S++WKD+G
Sbjct: 123 ALLDITSTLVTSVKSQSNEGVTPTDFVSCLLTMFGESNSNRLSSQGNNNAQMSINWKDVG 182

Query: 182 LSVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTD 241
           L+VS      HGC TMLGPM  ++KQRK   + +KR +PT++++P EV+D+ +  KTDTD
Sbjct: 183 LAVSPFLSACHGCSTMLGPMKTEVKQRKVV-VRKKREKPTQTAQPEEVDDSEAVEKTDTD 242

Query: 242 KNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVS 301
           KNM  MF ILRR K+V+LE LILNR+SFAQTVENLFALSFLVKDGR EI ++++G H V+
Sbjct: 243 KNMTTMFEILRRKKSVRLESLILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLVA 302

Query: 302 PKNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEAT 361
           P+NAP+  ++MS +V YSHFVFR+D+KDWK M D+VP GEELMPHR   N+  V QAE  
Sbjct: 303 PRNAPSADSVMSGQVKYSHFVFRYDFKDWKLMKDVVPAGEELMPHRESSNALPVPQAEQA 362

Query: 362 ADDSEAAALPTTPIRKLSRNRGLVI--QTVVEDSPDNGSHSGATAILRCKRKL 406
           + ++   A  TTPIRKLSRNRGLVI  ++VVEDSP++     +T +LRCKRK+
Sbjct: 363 SYNNTEGASRTTPIRKLSRNRGLVIREESVVEDSPEDDVAERSTRMLRCKRKI 404

[Close]

BLAST of Cla004793 vs. TrEMBL
Match: A0A061GSH5_THECC (Nse4, component of Smc5/6 DNA repair complex, putative isoform 1 OS=Theobroma cacao GN=TCM_040402 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 1.6e-114
Identity = 222/373 (59.52%), Postives = 285/373 (76.41%), Query Frame = 1


Query: 36  RERVARVRENSGEDNTTEEEVGQQDLTKRRVLRSRYLAVIHEISERREDLSK-DLDKFNV 95
           R RVAR   +   D  +++   Q+D   RR+LRS+YLAV+ +I++ R+++SK D +KFN+
Sbjct: 21  RTRVARPARHDSADVESDQLSRQEDAANRRLLRSKYLAVMTKINDARDEISKVDSNKFNI 80

Query: 96  IINEVEKLHEQVQKPREQVADAEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADI 155
           IINEV+ LH+QV KPREQVADAEAL DIAN+L TS++S S EGV+ +D+V+CL+REF   
Sbjct: 81  IINEVDNLHQQVSKPREQVADAEALLDIANTLATSVKSISCEGVSLADYVNCLVREFGKS 140

Query: 156 NVSMQSEEQDLVSVSWKDIGLSVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPT 215
           N S+ ++E + +SV+WKDIG++VS  F    G  TMLGPM N+LKQRK+    ++  RPT
Sbjct: 141 NRSLDTQENEQISVNWKDIGMAVSPFFTTCKGICTMLGPMKNELKQRKSIVTRKRAIRPT 200

Query: 216 ESSRPAEVEDNGSEVKTDTDKNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSF 275
           +++RP EV+D G+E KTDTDKNM  MF ILRR + VKLE LILNR SFAQTVENLFALSF
Sbjct: 201 DTARPEEVDDTGAEEKTDTDKNMATMFEILRRKRQVKLESLILNRSSFAQTVENLFALSF 260

Query: 276 LVKDGRAEITIDKNGSHFVSPKNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGE 335
           LVKDGRAEI +DK+GSH VSPKNAP   ++ + EV YSHFVFRFD+KDWK M+  VPVGE
Sbjct: 261 LVKDGRAEIVVDKSGSHIVSPKNAPGTMSVTTGEVTYSHFVFRFDFKDWKLMMSGVPVGE 320

Query: 336 ELMPHRNILNSEQVSQAEATADDSEAAALPTTPIRKLSRNRGLVIQ-TVVEDSPDNGSHS 395
           ELMPHR   +S  +S+AE+ A++SE  AL TTPIRKLSRNRGLV+Q ++VEDSP+    S
Sbjct: 321 ELMPHREESHS-ILSKAESAANNSE-GALTTTPIRKLSRNRGLVLQESIVEDSPEIDDGS 380

Query: 396 GATAILRCKRKLS 407
               I RC+RKL+
Sbjct: 381 KGPGIRRCRRKLN 391

[Close]

BLAST of Cla004793 vs. NCBI nr
Match: gi|659100485|ref|XP_008451119.1| (PREDICTED: non-structural maintenance of chromosomes element 4 homolog A [Cucumis melo])

HSP 1 Score: 719.2 bits (1855), Expect = 4.2e-204
Identity = 371/409 (90.71%), Postives = 387/409 (94.62%), Query Frame = 1


Query: 1   MRPVKREPTSSSRSNRSRGG-GDDGAVDAASLRDIKRERVARVRENSGEDNTTEEEVGQQ 60
           MRPVKREPT S+RS R+RGG G  GAVD ASLRD KRERVAR RENSGE+N + EEVGQQ
Sbjct: 1   MRPVKREPTVSTRSKRNRGGDGGGGAVDGASLRDSKRERVARERENSGEENMS-EEVGQQ 60

Query: 61  DLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEAL 120
           DLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEAL
Sbjct: 61  DLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEAL 120

Query: 121 QDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVSS 180
           QDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADIN S+ SEEQ+LVSV+WKDIGLSVSS
Sbjct: 121 QDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINGSINSEEQELVSVNWKDIGLSVSS 180

Query: 181 IFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGI 240
           IFMNG+GCRTMLGPMSNQLKQRKTNN+ RKRS+PTESSRPAEVEDNGSE KTDTDKNMGI
Sbjct: 181 IFMNGYGCRTMLGPMSNQLKQRKTNNVPRKRSKPTESSRPAEVEDNGSEPKTDTDKNMGI 240

Query: 241 MFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAP 300
           MFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAP
Sbjct: 241 MFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAP 300

Query: 301 AHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATADDSE 360
           AHS IMSHEVNYSHFVFRFDYKDWKPMV+MVPVGEELMPHRN LNS  VS+ EATADDSE
Sbjct: 301 AHSAIMSHEVNYSHFVFRFDYKDWKPMVNMVPVGEELMPHRNFLNSVPVSEEEATADDSE 360

Query: 361 AAALPTTPIRKLSRNRGLVIQTVVEDSPDNGSHSGATAILRCKRKLSQG 409
           +A+LPTTPIRKLSRNRGLV+Q+VVEDSPDNGS SG TAILR KRKLSQG
Sbjct: 361 SASLPTTPIRKLSRNRGLVMQSVVEDSPDNGSQSGPTAILRGKRKLSQG 408

[Close]

BLAST of Cla004793 vs. NCBI nr
Match: gi|449462613|ref|XP_004149035.1| (PREDICTED: non-structural maintenance of chromosomes element 4 homolog A-like [Cucumis sativus])

HSP 1 Score: 717.6 bits (1851), Expect = 1.2e-203
Identity = 372/413 (90.07%), Postives = 383/413 (92.74%), Query Frame = 1


Query: 1   MRPVKREPTSSSRSNRSRGG-----GDDGAVDAASLRDIKRERVARVRENSGEDNTTEEE 60
           MRPVKREPT S+RSNR+RGG     G  GAVD ASLRD KRERVAR RENSGE+N   EE
Sbjct: 1   MRPVKREPTVSTRSNRNRGGDGGGGGGGGAVDGASLRDSKRERVARERENSGEENM-NEE 60

Query: 61  VGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVAD 120
           VGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVAD
Sbjct: 61  VGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVAD 120

Query: 121 AEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGL 180
           AEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADIN S+ SEEQDLVSV+WKDIGL
Sbjct: 121 AEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINGSINSEEQDLVSVNWKDIGL 180

Query: 181 SVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDK 240
           SVSSIFMNG+GCRTMLGPMSNQLKQRKTNN+ RKR RPTESSRPAEVEDNGSE KTDTDK
Sbjct: 181 SVSSIFMNGYGCRTMLGPMSNQLKQRKTNNVPRKRVRPTESSRPAEVEDNGSEPKTDTDK 240

Query: 241 NMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSP 300
           NMGIMFGILRRNKTVKLEHLILNRKSF QTVENLFALSFLVKDGRAEITIDKNGSHFVSP
Sbjct: 241 NMGIMFGILRRNKTVKLEHLILNRKSFGQTVENLFALSFLVKDGRAEITIDKNGSHFVSP 300

Query: 301 KNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATA 360
           KNAPAHS IMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHR  LNS QVSQ E  A
Sbjct: 301 KNAPAHSAIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRTFLNSVQVSQEEVAA 360

Query: 361 DDSEAAALPTTPIRKLSRNRGLVIQTVVEDSPDNGSHSGATAILRCKRKLSQG 409
           D+SE+A LPTTPIRKLSRNRGLV+Q+VVEDSPDNGS SGATAILR KRKLSQG
Sbjct: 361 DNSESAGLPTTPIRKLSRNRGLVMQSVVEDSPDNGSQSGATAILRGKRKLSQG 412

[Close]

BLAST of Cla004793 vs. NCBI nr
Match: gi|595824841|ref|XP_007205305.1| (hypothetical protein PRUPE_ppa006782mg [Prunus persica])

HSP 1 Score: 438.3 bits (1126), Expect = 1.4e-119
Identity = 239/402 (59.45%), Postives = 292/402 (72.64%), Query Frame = 1


Query: 8   PTSSSRSN-RSRGGGDDGAVDAASLRDIKRERVARVRENSGEDNTTEEEVGQQDLTKRRV 67
           P S+ R   RS+ G  D   DA  LR +KRERV     N+G      +   +QD  +RR 
Sbjct: 2   PKSAKRQRTRSQSGDVD---DAEQLRAVKRERV---NANAGRVENESDLPSEQDSVQRRT 61

Query: 68  LRSRYLAVIHEISERREDLS-KDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANS 127
           LRS YLAV + ISE+R+DL   + ++F +IIN+VEKLHEQVQKPREQVADAEAL DI N+
Sbjct: 62  LRSDYLAVKNLISEKRDDLMCPESERFCLIINKVEKLHEQVQKPREQVADAEALLDITNT 121

Query: 128 LVTSIRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVSSIFMNGH 187
           L TS++SQS+ G++PSDFV+C+L  F  +N S+ S+E   VS+ WKDIGL+V+ IF   H
Sbjct: 122 LWTSVKSQSSAGISPSDFVTCVLNNFKQLNSSLASQEDAPVSIKWKDIGLAVAPIFKRAH 181

Query: 188 GCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILR 247
           GC TMLGPM+ +LKQRK   +  K ++PT + RP E++D   E KTDTDKNM  MF ILR
Sbjct: 182 GCCTMLGPMNTELKQRKAV-VRSKHAKPTTTDRPDEIDDTQGEEKTDTDKNMSTMFDILR 241

Query: 248 RNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIM 307
           RNK V+LE LILNRKSFAQTVENLFALSFLVKDGRAEIT+D NGSH VSP+NAPA + + 
Sbjct: 242 RNKRVRLEGLILNRKSFAQTVENLFALSFLVKDGRAEITVDANGSHLVSPRNAPAANLVA 301

Query: 308 SHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATADDSEAAALPT 367
           S EV Y HFVFRFD+KDWK M DM+PVGEELMPHR+  NS   SQ E  A  S+  ALPT
Sbjct: 302 SREVVYDHFVFRFDFKDWKLMKDMLPVGEELMPHRSPPNSLPASQEEPAAYSSQ-TALPT 361

Query: 368 TPIRKLSRNRGLVIQ--TVVEDSPDNGSHSGATAILRCKRKL 406
           TPIRKLSRNRG ++Q  +VVE+SP+N   +G   + R KRKL
Sbjct: 362 TPIRKLSRNRGRLVQEESVVEESPENDDAAGTNVVRRSKRKL 395

[Close]

BLAST of Cla004793 vs. NCBI nr
Match: gi|645277126|ref|XP_008243618.1| (PREDICTED: non-structural maintenance of chromosomes element 4 homolog A [Prunus mume])

HSP 1 Score: 434.5 bits (1116), Expect = 2.1e-118
Identity = 236/398 (59.30%), Postives = 288/398 (72.36%), Query Frame = 1


Query: 11  SSRSNRSRGGGDDGAVDAASLRDIKRERVARVRENSGEDNTTEEEVGQQDLTKRRVLRSR 70
           S++  R+R    D   DA  LR +KRERV     N+G      +   +QD  +RR LRS 
Sbjct: 4   SAKRQRTRSQSRD-VDDAEQLRAVKRERV---HANAGRVENESDLPSEQDSVQRRTLRSD 63

Query: 71  YLAVIHEISERREDLS-KDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANSLVTS 130
           YLAV + I E+R+DL   + ++F +IIN+VEKLHEQVQKPREQVADAEAL DI N+L TS
Sbjct: 64  YLAVKNLICEKRDDLMCPESERFCLIINKVEKLHEQVQKPREQVADAEALLDITNTLWTS 123

Query: 131 IRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVSSIFMNGHGCRT 190
           ++SQS+ G++PSDFV+C+L  F   N S+ S+E   VS+ WKDIGL+VS IF   HGC T
Sbjct: 124 VKSQSSAGISPSDFVTCVLNNFKQSNSSLASQEDAPVSIKWKDIGLAVSPIFKRAHGCCT 183

Query: 191 MLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILRRNKT 250
           MLGPM+ +LKQRK   +  K ++PT + RP E++D   E KTDTDKNM  MF ILRRNK 
Sbjct: 184 MLGPMNTELKQRKAV-VRSKHAKPTTTDRPDEIDDTQGEEKTDTDKNMSTMFDILRRNKR 243

Query: 251 VKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIMSHEV 310
           V+LE LILNRKSFAQTVENLFALSFLVKDGRAEIT+D NGSH VSP+NAPA + + S EV
Sbjct: 244 VRLEGLILNRKSFAQTVENLFALSFLVKDGRAEITVDANGSHLVSPRNAPAANLVASREV 303

Query: 311 NYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATADDSEAAALPTTPIR 370
            Y HFVFRFD+KDWK M DM+PVGEELMPHR+  NS   SQ E  A  S+  ALPTTPIR
Sbjct: 304 VYDHFVFRFDFKDWKLMKDMLPVGEELMPHRSPPNSLPASQEEPAAYSSQ-TALPTTPIR 363

Query: 371 KLSRNRGLVIQ--TVVEDSPDNGSHSGATAILRCKRKL 406
           KLSRNRG ++Q  +VVE+SP+N   +G   + R KRKL
Sbjct: 364 KLSRNRGRLVQEESVVEESPENDDAAGTNVVRRSKRKL 395

[Close]

BLAST of Cla004793 vs. NCBI nr
Match: gi|567907227|ref|XP_006445927.1| (hypothetical protein CICLE_v10015454mg [Citrus clementina])

HSP 1 Score: 423.3 bits (1087), Expect = 4.8e-115
Identity = 228/413 (55.21%), Postives = 297/413 (71.91%), Query Frame = 1


Query: 2   RPVKREPTSSSRSNRSRGGGDDGAVDAAS---LRDIKRERVARVRENSGEDNTTEEEVGQ 61
           R VKRE  SSSR          G VD +S   LR +KRE+++R   +   DN +      
Sbjct: 3   RAVKREAGSSSR----------GRVDDSSEQLLRTVKREKLSRNGADENLDNESTRTNQP 62

Query: 62  QDLTKRRVLRSRYLAVIHEISERREDLSK-DLDKFNVIINEVEKLHEQVQKPREQVADAE 121
           QD  +RRVLRS+YLAV+ +I ++R+DL++ D  KFN I+ EV+ LH  VQKPREQVADAE
Sbjct: 63  QDTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAE 122

Query: 122 ALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADIN---VSMQSEEQDLVSVSWKDIG 181
           AL DI ++LVTS++SQSNEGVTP+DFVSCLL  F + N   +S Q      +S++WKD+G
Sbjct: 123 ALLDITSTLVTSVKSQSNEGVTPTDFVSCLLTMFGESNSNRLSSQGNNNAQMSINWKDVG 182

Query: 182 LSVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTD 241
           L+VS      HGC TMLGPM  ++KQRK   + +KR +PT++++P EV+D+ +  KTDTD
Sbjct: 183 LAVSPFLSACHGCSTMLGPMKTEVKQRKVV-VRKKREKPTQTAQPEEVDDSEAVEKTDTD 242

Query: 242 KNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVS 301
           KNM  MF ILRR K+V+LE LILNR+SFAQTVENLFALSFLVKDGR EI ++++G H V+
Sbjct: 243 KNMTTMFEILRRKKSVRLESLILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLVA 302

Query: 302 PKNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEAT 361
           P+NAP+  ++MS +V YSHFVFR+D+KDWK M D+VP GEELMPHR   N+  V QAE  
Sbjct: 303 PRNAPSADSVMSGQVKYSHFVFRYDFKDWKLMKDVVPAGEELMPHRESSNALPVPQAEQA 362

Query: 362 ADDSEAAALPTTPIRKLSRNRGLVI--QTVVEDSPDNGSHSGATAILRCKRKL 406
           + ++   A  TTPIRKLSRNRGLVI  ++VVEDSP++     +T +LRCKRK+
Sbjct: 363 SYNNTEGASRTTPIRKLSRNRGLVIREESVVEDSPEDDVAERSTRMLRCKRKI 404

The following BLAST results are available for this feature:

BLAST of Cla004793 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NSE4A_ARATH	9.9e-105	51.88	Non-structural maintenance of chromosomes element 4 homolog A OS=Arabidopsis tha...	[more]
NSE4B_ARATH	1.5e-92	47.69	Non-structural maintenance of chromosomes element 4 homolog B OS=Arabidopsis tha...	[more]
NSE4A_BOVIN	6.6e-16	21.96	Non-structural maintenance of chromosomes element 4 homolog A OS=Bos taurus GN=N...	[more]
NSE4A_HUMAN	8.6e-16	22.52	Non-structural maintenance of chromosomes element 4 homolog A OS=Homo sapiens GN...	[more]
NSE4_SCHPO	3.1e-13	22.61	Non-structural maintenance of chromosome element 4 OS=Schizosaccharomyces pombe ...	[more]

BLAST of Cla004793 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZJ0_CUCSA	8.5e-204	90.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G605680 PE=4 SV=1	[more]
M5VYK3_PRUPE	9.9e-120	59.45	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006782mg PE=4 SV=1	[more]
V4TZZ5_9ROSI	3.3e-115	55.21	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015454mg PE=4 SV=1	[more]
A0A067EZQ6_CITSI	3.3e-115	55.21	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015540mg PE=4 SV=1	[more]
A0A061GSH5_THECC	1.6e-114	59.52	Nse4, component of Smc5/6 DNA repair complex, putative isoform 1 OS=Theobroma ca...	[more]

BLAST of Cla004793 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659100485\|ref\|XP_008451119.1\|	4.2e-204	90.71	PREDICTED: non-structural maintenance of chromosomes element 4 homolog A [Cucumi...	[more]
gi\|449462613\|ref\|XP_004149035.1\|	1.2e-203	90.07	PREDICTED: non-structural maintenance of chromosomes element 4 homolog A-like [C...	[more]
gi\|595824841\|ref\|XP_007205305.1\|	1.4e-119	59.45	hypothetical protein PRUPE_ppa006782mg [Prunus persica]	[more]
gi\|645277126\|ref\|XP_008243618.1\|	2.1e-118	59.30	PREDICTED: non-structural maintenance of chromosomes element 4 homolog A [Prunus...	[more]
gi\|567907227\|ref\|XP_006445927.1\|	4.8e-115	55.21	hypothetical protein CICLE_v10015454mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR014854	Nse4_C
IPR027786	Nse4/EID

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0030915	Smc5-Smc6 complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006281	DNA repair

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030915	Smc5-Smc6 complex
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla004793	Cla004793	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla004793	Cla004793.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla004793.1.cds1	Cla004793.1.cds1	CDS
Cla004793.1.cds2	Cla004793.1.cds2	CDS
Cla004793.1.cds3	Cla004793.1.cds3	CDS
Cla004793.1.cds4	Cla004793.1.cds4	CDS
Cla004793.1.cds5	Cla004793.1.cds5	CDS
Cla004793.1.cds6	Cla004793.1.cds6	CDS
Cla004793.1.cds7	Cla004793.1.cds7	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014854	Non-structural maintenance of chromosome element 4, C-terminal	PFAM	PF08743	Nse4_C	coord: 250..339 score: 2.8
IPR027786	Nse4/EID family	PANTHER	PTHR16140	UNCHARACTERIZED	coord: 58..398 score: 6.1E
None	No IPR available	PANTHER	PTHR16140:SF5	SUBFAMILY NOT NAMED	coord: 58..398 score: 6.1E