ClCG11G009450 (gene) Watermelon (Charleston Gray)

NameClCG11G009450
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionGPI-anchored protein-like
LocationCG_Chr11 : 15406750 .. 15408476 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGGGAAGAGAGACGAGAAGAAGAGGTTACCGGATCAGCCAGTGTAGATATGGATATGGAGAGCGAGAATGAAGACAGCATAGAGAATGAAGAAGATGAGCGTGTGTATAGCGACAGCCTTGCCGTTGGTTTTCATGCTCCCGAACTCAAACTGCCGATTATTCCCCGGAAACTGGAAGAGAAGCCCTGGAGAGAGCAGTACGAATAGTACAACTCCGATCACCACCGGTGCCCAATCCGACATACTTTCACAGATATCGTAATTCACAAAAAGGTAGATAAAGAGAGAAATGAAAAGAGAAACTGAAAGTAGCAGAACGTAAAGGGATTTGGTCTGTGGAAAAAAAGAGAGTAAAAATGGCTTTGCGGTAACGCGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGAAATGGAATTCAGCAGAGTTCACTTTATTATTATTTTTTTTTTTTCTTTTCTTTTTTCTTTTATTATTATTATTATTATTTTCCGTATCCATAGGAAAAATAACGCTTTGGTTCAGGATTCGAAAATTATGGGAATCCGAGAAGTTGTTGTTAATTACGAGATTGACACTAGTTAGTGGTGATGGTTAGTGAGTGATTGTGTGCGGGCGGTAGCAGATTATTACATTTGTAATTTTGAATTGGAGGCATTAAATGAAGTGATAAATGGGCCCAGAGGCCCATAATTTGATGAAGAAGTGGGCCAGAAGGTGAATGGCCCACGGAATTGGCGGGTTGGTCACGGTCGGCGGCAGAATAAGCGGGAAGTAAAAAAGGATGGTCCTGAAATAATGGTGGATTTATGTGCAATGTGCTCTTGCTTTCCTAATCCATTTTTTGACCATTAATTGCTTTAAAATTTGTGCCGTCCACCTCTGGGGTCCTCTAAGTTCTAATATTTTAATTTTTGGTTGTTCCAACTTTTACAAAAGTAACCTTCTCAAATCTTAACTTTATTCACTAATAATTTACTTTCTGCAATTTCAAATTATTTGGAGAGAGTAGACTATTATAGTATATTTCAAATTTGAAACACTAACAACTATTATGACTCACAATTAACCACAATATTACTTTTTGAAATTCTTTTTTGTTATTGTGTTTACTATTCTTACATATCATCACTTTCTCACTTTGCTACAGTATTTTTTACTAGTTTACACTCCAAACACATGGTATTACAACCTACATACAGATTAAAATAACTACAAAACAAACTATGATAACCAAGTTAGGGCATATAAGAATTAATAAGCATTGGTGAAGTATTTTTGTAAAAATGGGTGTGGAGGAGATTAATGCATGATATTGGTTAAAGTTGGAGGACATAATTATGCAATGTGGGACGTGTCAGGATGTGGGGTTGGTTTGTAGGGAAATTCTTATTCTTCCACCAATGCCGAAAAGACTTTATTTAGGGGAATATATATATATATATATATATATATAAAGTGTGTTTTAGTGGGAAGAGTAGTTAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAATATGAATGATTTGGCAGCTCCATTGATAGCATCAATATTGTTTGCGTTTCTATCACCAGGGATGATAATTCAGATGCCGGGAACAGAACGACCACTTGAGTTCATGAACTTGAAGACCAGTTTTGCTTCTATTTTTGTTCATGCTGTTGTGTTTCTTCTCCTTCTTATTTTGTTCCTTGTCATGCTCAACCTCCATATTTACATCTAA

mRNA sequence

ATGAAAAGGGAAGAGAGACGAGAAGAAGAGGTTACCGGATCAGCCAGTGTAGATATGGATATGGAGAGCGAGAATGAAGACAGCATAGAGAATGAAGAAGATGAGCGTGTGTATAGCGACAGCCTTGCCGTTGGTTTTCATGCTCCCGAACTCAAACTGCCGATTATTCCCCGGAAACTGGAAGAGAAGCCCTGGAGAGAGCAAAGAGAAGAGAAGAGAAGAGAAGAGAAGAATATGAATGATTTGGCAGCTCCATTGATAGCATCAATATTGTTTGCGTTTCTATCACCAGGGATGATAATTCAGATGCCGGGAACAGAACGACCACTTGAGTTCATGAACTTGAAGACCAGTTTTGCTTCTATTTTTGTTCATGCTGTTGTGTTTCTTCTCCTTCTTATTTTGTTCCTTGTCATGCTCAACCTCCATATTTACATCTAA

Coding sequence (CDS)

ATGAAAAGGGAAGAGAGACGAGAAGAAGAGGTTACCGGATCAGCCAGTGTAGATATGGATATGGAGAGCGAGAATGAAGACAGCATAGAGAATGAAGAAGATGAGCGTGTGTATAGCGACAGCCTTGCCGTTGGTTTTCATGCTCCCGAACTCAAACTGCCGATTATTCCCCGGAAACTGGAAGAGAAGCCCTGGAGAGAGCAAAGAGAAGAGAAGAGAAGAGAAGAGAAGAATATGAATGATTTGGCAGCTCCATTGATAGCATCAATATTGTTTGCGTTTCTATCACCAGGGATGATAATTCAGATGCCGGGAACAGAACGACCACTTGAGTTCATGAACTTGAAGACCAGTTTTGCTTCTATTTTTGTTCATGCTGTTGTGTTTCTTCTCCTTCTTATTTTGTTCCTTGTCATGCTCAACCTCCATATTTACATCTAA

Protein sequence

MKREERREEEVTGSASVDMDMESENEDSIENEEDERVYSDSLAVGFHAPELKLPIIPRKLEEKPWREQREEKRREEKNMNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLVMLNLHIYI
BLAST of ClCG11G009450 vs. TrEMBL
Match: A0A059APB1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01639 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-19
Identity = 47/68 (69.12%), Postives = 60/68 (88.24%), Query Frame = 1

Query: 79  MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 138
           MND AAPLIAS LFAFLSPGM++QMPG  +P++F+N+KTS  SIFVHAV++ LLLILF V
Sbjct: 1   MNDWAAPLIASALFAFLSPGMVVQMPGKSQPVDFLNMKTSLPSIFVHAVLYGLLLILFFV 60

Query: 139 MLNLHIYI 147
           +LN+H+Y+
Sbjct: 61  VLNIHLYV 68

BLAST of ClCG11G009450 vs. TrEMBL
Match: A9PBG8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s09680g PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-18
Identity = 46/68 (67.65%), Postives = 60/68 (88.24%), Query Frame = 1

Query: 79  MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 138
           MND AA LIA+ LFAFLSPG++ QMPG ERPL+FMN+KTS A+IFVH V++ LLL+LFLV
Sbjct: 1   MNDWAASLIAAALFAFLSPGLVFQMPGKERPLDFMNMKTSLAAIFVHLVIYGLLLVLFLV 60

Query: 139 MLNLHIYI 147
           +L++H+Y+
Sbjct: 61  ILHVHLYV 68

BLAST of ClCG11G009450 vs. TrEMBL
Match: M5X8J0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb025443mg PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.8e-18
Identity = 48/67 (71.64%), Postives = 59/67 (88.06%), Query Frame = 1

Query: 79  MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 138
           M + AAPLIAS LFAFLSPG++ QMPG ERP EFMN+KTS ASIF+HAV++ LL+ILFLV
Sbjct: 1   MKNWAAPLIASGLFAFLSPGLVFQMPGKERPFEFMNMKTSVASIFLHAVIYGLLIILFLV 60

Query: 139 MLNLHIY 146
           +L++HIY
Sbjct: 61  ILDIHIY 67

BLAST of ClCG11G009450 vs. TrEMBL
Match: A0A061EDX5_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_017236 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.0e-18
Identity = 44/68 (64.71%), Postives = 61/68 (89.71%), Query Frame = 1

Query: 79  MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 138
           MND AAPLIA+ LFAFLSPG+++Q+PG  +P++FMN+KTS A+IFVHAV++ L LILFLV
Sbjct: 67  MNDWAAPLIAAALFAFLSPGLVLQIPGKNQPIDFMNMKTSVAAIFVHAVLYALFLILFLV 126

Query: 139 MLNLHIYI 147
           +L++H+Y+
Sbjct: 127 VLHVHLYV 134

BLAST of ClCG11G009450 vs. TrEMBL
Match: B9GJV5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s33640g PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.9e-18
Identity = 46/68 (67.65%), Postives = 58/68 (85.29%), Query Frame = 1

Query: 79  MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 138
           M D AAPLIA+ LFAFLSPG++ QMPG ERPL+FMN+KTS A++FVH V++ LLLILFLV
Sbjct: 1   MKDWAAPLIAAALFAFLSPGLVFQMPGKERPLDFMNMKTSLAAMFVHLVIYGLLLILFLV 60

Query: 139 MLNLHIYI 147
            L+ H+Y+
Sbjct: 61  ALHAHLYV 68

BLAST of ClCG11G009450 vs. TAIR10
Match: AT5G40960.1 (AT5G40960.1 Protein of unknown function (DUF 3339))

HSP 1 Score: 96.7 bits (239), Expect = 1.3e-20
Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 1

Query: 79  MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 138
           M+D AAPLIAS LFAFLSPG+I+Q PG E P+ FMN+KT+ ASIFVH V++ L LILFLV
Sbjct: 1   MHDWAAPLIASALFAFLSPGLILQFPGKESPVGFMNMKTTVASIFVHTVLYGLFLILFLV 60

Query: 139 MLNLHIY 146
           +LN+H+Y
Sbjct: 61  VLNVHVY 67

BLAST of ClCG11G009450 vs. TAIR10
Match: AT5G63500.1 (AT5G63500.1 Protein of unknown function (DUF 3339))

HSP 1 Score: 68.6 bits (166), Expect = 3.7e-12
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 1

Query: 79  MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 138
           M D    LIA ILF  LSPG++ Q+P   R +EF N++TS ASI VHA++F  L+ +F +
Sbjct: 1   MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 139 MLNLHIY 146
            +N+HIY
Sbjct: 61  AINVHIY 67

BLAST of ClCG11G009450 vs. TAIR10
Match: AT3G48660.1 (AT3G48660.1 Protein of unknown function (DUF 3339))

HSP 1 Score: 63.9 bits (154), Expect = 9.2e-11
Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 1

Query: 79  MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 138
           M D    ++A ILF  L+PG++ Q+P   R +EF N++TS ASI VH ++F  L+ +F +
Sbjct: 1   MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 139 MLNLHIY 146
            + LHIY
Sbjct: 61  AIRLHIY 67

BLAST of ClCG11G009450 vs. TAIR10
Match: AT3G27030.1 (AT3G27030.1 unknown protein)

HSP 1 Score: 62.0 bits (149), Expect = 3.5e-10
Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 1

Query: 78  NMNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFL 137
           +M D A  L+  +LF  LSPG++  +PG  R ++F  LKT+  +I VH ++F  +  + +
Sbjct: 73  SMADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYTILI 132

Query: 138 VMLNLHIY 146
           + LNLHIY
Sbjct: 133 LALNLHIY 140


HSP 2 Score: 55.1 bits (131), Expect = 4.3e-08
Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 1

Query: 79  MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 138
           M D     +A  LF  L+PG++IQ+PG  R +EF   +TS  S+ VH +++  L+ + L+
Sbjct: 1   MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60

Query: 139 MLNLHI 145
            L +HI
Sbjct: 61  ALQIHI 66

BLAST of ClCG11G009450 vs. TAIR10
Match: AT5G40980.1 (AT5G40980.1 Protein of unknown function (DUF 3339))

HSP 1 Score: 58.5 bits (140), Expect = 3.9e-09
Identity = 24/65 (36.92%), Postives = 39/65 (60.00%), Query Frame = 1

Query: 81  DLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLVML 140
           D    ++A  LF  LSPG++ Q+P   R +EF N+ TS  SI VHA+++  +L + ++ +
Sbjct: 4   DWGPVIVAVALFILLSPGLLFQLPARTRVMEFGNMSTSGISILVHAIIYFCILTILIIAI 63

Query: 141 NLHIY 146
            +HI+
Sbjct: 64  QIHIH 68

BLAST of ClCG11G009450 vs. NCBI nr
Match: gi|449441704|ref|XP_004138622.1| (PREDICTED: uncharacterized protein LOC101212134 [Cucumis sativus])

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-26
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 1

Query: 79  MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 138
           MNDLA PLIASILFAFLSPGMIIQMPG+E+PLEFMN KTSFASIFVHAVVFLLLLILFLV
Sbjct: 1   MNDLAGPLIASILFAFLSPGMIIQMPGSEKPLEFMNFKTSFASIFVHAVVFLLLLILFLV 60

Query: 139 MLNLHIYI 147
           MLNLHIYI
Sbjct: 61  MLNLHIYI 68

BLAST of ClCG11G009450 vs. NCBI nr
Match: gi|802539278|ref|XP_012070230.1| (PREDICTED: uncharacterized protein LOC105632455 [Jatropha curcas])

HSP 1 Score: 103.6 bits (257), Expect = 3.0e-19
Identity = 49/68 (72.06%), Postives = 60/68 (88.24%), Query Frame = 1

Query: 79  MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 138
           MND AAPLIA+ LFAFLSPG +IQ+PG ERPL+FMN+KTS ASIFVH V++ LLLILF V
Sbjct: 1   MNDWAAPLIAAALFAFLSPGWVIQIPGKERPLDFMNMKTSIASIFVHTVIYGLLLILFFV 60

Query: 139 MLNLHIYI 147
           +L++H+YI
Sbjct: 61  VLHVHLYI 68

BLAST of ClCG11G009450 vs. NCBI nr
Match: gi|694435511|ref|XP_009344918.1| (PREDICTED: uncharacterized protein LOC103936776 [Pyrus x bretschneideri])

HSP 1 Score: 103.6 bits (257), Expect = 3.0e-19
Identity = 48/67 (71.64%), Postives = 60/67 (89.55%), Query Frame = 1

Query: 79  MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 138
           M D AAPLIAS LFAFLSPG++ QMPG ERPLEFMN+KT+ AS+F+HAV++ LLLILFL+
Sbjct: 1   MKDWAAPLIASALFAFLSPGLVFQMPGKERPLEFMNMKTNIASMFLHAVIYGLLLILFLI 60

Query: 139 MLNLHIY 146
           +L++HIY
Sbjct: 61  ILDIHIY 67

BLAST of ClCG11G009450 vs. NCBI nr
Match: gi|702464750|ref|XP_010028988.1| (PREDICTED: uncharacterized protein LOC104419132 [Eucalyptus grandis])

HSP 1 Score: 103.2 bits (256), Expect = 3.9e-19
Identity = 47/68 (69.12%), Postives = 60/68 (88.24%), Query Frame = 1

Query: 79  MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 138
           MND AAPLIAS LFAFLSPGM++QMPG  +P++F+N+KTS  SIFVHAV++ LLLILF V
Sbjct: 1   MNDWAAPLIASALFAFLSPGMVVQMPGKSQPVDFLNMKTSLPSIFVHAVLYGLLLILFFV 60

Query: 139 MLNLHIYI 147
           +LN+H+Y+
Sbjct: 61  VLNIHLYV 68

BLAST of ClCG11G009450 vs. NCBI nr
Match: gi|566212455|ref|XP_006373210.1| (hypothetical protein POPTR_0017s09680g [Populus trichocarpa])

HSP 1 Score: 100.9 bits (250), Expect = 1.9e-18
Identity = 46/68 (67.65%), Postives = 60/68 (88.24%), Query Frame = 1

Query: 79  MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 138
           MND AA LIA+ LFAFLSPG++ QMPG ERPL+FMN+KTS A+IFVH V++ LLL+LFLV
Sbjct: 1   MNDWAASLIAAALFAFLSPGLVFQMPGKERPLDFMNMKTSLAAIFVHLVIYGLLLVLFLV 60

Query: 139 MLNLHIYI 147
           +L++H+Y+
Sbjct: 61  ILHVHLYV 68

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A059APB1_EUCGR2.7e-1969.12Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01639 PE=4 SV=1[more]
A9PBG8_POPTR1.3e-1867.65Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s09680g PE=2 SV=1[more]
M5X8J0_PRUPE1.8e-1871.64Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb025443mg PE=4 SV=1[more]
A0A061EDX5_THECC3.0e-1864.71Uncharacterized protein OS=Theobroma cacao GN=TCM_017236 PE=4 SV=1[more]
B9GJV5_POPTR3.9e-1867.65Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s33640g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G40960.11.3e-2068.66 Protein of unknown function (DUF 3339)[more]
AT5G63500.13.7e-1249.25 Protein of unknown function (DUF 3339)[more]
AT3G48660.19.2e-1143.28 Protein of unknown function (DUF 3339)[more]
AT3G27030.13.5e-1039.71 unknown protein[more]
AT5G40980.13.9e-0936.92 Protein of unknown function (DUF 3339)[more]
Match NameE-valueIdentityDescription
gi|449441704|ref|XP_004138622.1|2.5e-2694.12PREDICTED: uncharacterized protein LOC101212134 [Cucumis sativus][more]
gi|802539278|ref|XP_012070230.1|3.0e-1972.06PREDICTED: uncharacterized protein LOC105632455 [Jatropha curcas][more]
gi|694435511|ref|XP_009344918.1|3.0e-1971.64PREDICTED: uncharacterized protein LOC103936776 [Pyrus x bretschneideri][more]
gi|702464750|ref|XP_010028988.1|3.9e-1969.12PREDICTED: uncharacterized protein LOC104419132 [Eucalyptus grandis][more]
gi|566212455|ref|XP_006373210.1|1.9e-1867.65hypothetical protein POPTR_0017s09680g [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021775DUF3339
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0031225 anchored component of membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G009450.1ClCG11G009450.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021775Protein of unknown function DUF3339PFAMPF11820DUF3339coord: 79..145
score: 8.3
NoneNo IPR availablePANTHERPTHR33128FAMILY NOT NAMEDcoord: 59..146
score: 2.4
NoneNo IPR availablePANTHERPTHR33128:SF6SUBFAMILY NOT NAMEDcoord: 59..146
score: 2.4

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG11G009450Bottle gourd (USVL1VR-Ls)lsiwcgB229
ClCG11G009450Cucumber (Gy14) v2cgybwcgB098
ClCG11G009450Melon (DHL92) v3.6.1medwcgB261
ClCG11G009450Watermelon (97103) v2wcgwmbB067
ClCG11G009450Wax gourdwcgwgoB162
ClCG11G009450Cucurbita maxima (Rimu)cmawcgB251
ClCG11G009450Wild cucumber (PI 183967)cpiwcgB106
ClCG11G009450Melon (DHL92) v3.5.1mewcgB370
ClCG11G009450Cucurbita pepo (Zucchini)cpewcgB164