ClCG05G010660 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G010660
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Kinesin light chain, putative
Location	CG_Chr05 : 12055690 .. 12058729 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACACAAGGCAAGCAGCTTCAAAATGGTTAAAGAGATTAATCGTTCGCTCTACAGTACTCCATCGCACTTCCGAATCTCCCACGTCTCCCAATGTATCGATCTTGCCCTCCCGCTGTACGTAATTCAAGTTTTTCATCTTCTACGTAACAATATATACTTGTTGATACAGCAGTGTTGAACCTGCAATAACGTGAATCACACAATGTTGGAAGTGGGTTTTCACCTAGAGCTAATTCCTATGGTGTTCAAATAAATGAATTGCCATTAGTCTCAGCTATTTTATGATACGAATCATGTTTTGCACTATAGGTGTTAGTAACATCGAGACATGTTGTTAATCTCGGACCACGGAGTTCTGATTAAACTAGGTTTTTAAATTTTTACAAGCGTGGATAAATGGTTGAAGGATTCTTTAATTGATCCACAATTGCTCCGAATGGGCTGTTTATGTTTGTTAATAATTTTTTTTTCTTGCAGGCTACGCGAAATGTTCTTCGCGTAATAACGGCAATGGCTTTCATGATGGTTATCTCGATGGTTTTCCATGGGTTCTTTTGTCTGGACCTGCTGCAGGTTTGCTATTTTCACCTTAATATTTAGATGTTTCCATTTTGAGATTGCTAGTCGAGGTGTTTGATTTAAAGTGATCATCAAATTTAAACTAAAATAAGCAATTTTTCCTTTTTCATTCTGGAATTTTCTTGAGGCAGCAATTCTATTATTTCCTTTAAAGGCTCCACTCACTTAAATCTCATGCTATGTTTACAACATTTATAGGCTAAACTAATCTTTGACCCATTTTATAAAAGAACTTCAAGCACAACAAAAGTAAATTTTTATGAACTTTTGACATCTCCTTTTCGATCTTACAACATTTTTTTTGGAGAGTCTTGTTTATCACTTGCACATTAGTTCCAACTTGCTCACATGGGTCCTGCTGAAAATCACTCGAGCTCAAGATAACGAAAAACGAAATCACAATATCTAGATAATAATGAAATGAAATATAAAATTACAAGAACACCAGCACATTTGAGAGAGCTGGGTATCCTCTCCTAAAGCTGCAGCTTACTCCAGAATGACCACCCACACCCAACCAATCCGCCAAAACCTGTACATAAACCTTCAGCTCACTCCACTGGTCTTGCATAACAACTTTTGTCATCCACTAACCGTTTGTCTCCTGTGAATCTCCCTTTTGCCCTTTCTTCCATATGTGTGTATGAGGGGGTCTCACATGCTCCAAGGGGGGTCATGAGGTTTTTCTTATTTTTTTTAAATTTATTATTTTTTTTATTTTTAAAGTTGTGCAAAGCCACCACCACCATGGAAGAAATTTTGAAAAAGGTCGAAATCAGAGTATCTTTAATTACTATTCTAATGAATAAGGACTCTGATATCTGATATCTCCAAACTTCTCCTTAGAAAAAACTTTGAATAATTAGTTTCCAGTATGAAATGGATGAGGGAGACATCTGAGAGTGCCCATCCATTATTATAACTGTTTGATGTGAAAAGAATGCTATTGAAGACAGCTAATGAGAGAGAAGAGAGAAACAGGAGAGTTAGGGGAGGGTGGTGAATGTGGTGAAGGACTGAAATTGTGCATGAAGGAATTGGAGTTGAGAGGGAACCAGAAAGGCGAACCCATTTCCAGAGTTGACAGAGTATTGTTCAACTAACACTTATTTTTCCCGCAATTTCGTTGAGATTCTCAAATATTCTGTTTGTTTTATAAATAGCTGTGTGGATTACTCAATCTTTGTTGGTGGGATAGATTTATGCTTTTGTAAAACCTTTTTGAGGTTCTTGCTTCGGATTATTTCGTCAGCTATTTCATGTAGTTTTTGTATTTCTTAATAAATTTGTCCGCAATCTTCAAAAAAGGGGGAAAAGCAAGAATTGATAATGCCTGAAGATTGATATAATTTATTGTAATGACATCCATTGACCTCTGTGGTGCAGCTATTATTCTGGGAATAAACTCAAATCCTGTCTTAGCTAAAGACACATCATTTAAGCCAAGTTCCGAAAATGGTATTGAGGACAGTGAGACTATTGGACTACGCAAAGTGGAGGACGGATCTGTGATATCAAATTTACATACTTCAAAGTGGAGGGTTTTTACTGATACTGCTCGGGACTTATTTCTGCAGGCAAGCAGTGTTTCTTTTACCTTCACTAGCAGTTAATTCCTTAATGATTTGCACAAAGAAGGATTTTAACGCTTTTCTTTAATTAGGGAAGACTTGAAGAAGCAGAAAAATATTTTATTTCTGCGATTCAAGAAGCTAAAGAAGGTTTTGGGGAGAGAGATCCCCATGTTGCATCTGCCTTCAACAATCTGGTACTCTGGCTTCTGGTTTTTCTAATTTTTTTGATTATTTTACCTCTTTCTATCCTGGAGTTCGGACATTTTGATGAATATTATTGTTTTGGTTCTTAGTTGTTATCAATCCTGGAGTTTAGACATTTTTACTTGCACTAAAGTCTTCATGTAGTTTCTTTCACAAGATACTGCCTTTTCATTAATAATAATAAAAAAAAGAAACAAATATGATCAAAGGATACGAACTCCAAAAGGAGGTCTTCATGTGGTTACAAATAGTATCAAAATTCGTTGGGTTCAATTGTTAACAAGTTTTTGCCATATTTGCATTTTGCGATCCTACATCTACACAAATTGAAGTGGAACCTAGGCGGTTAAAATTCAGAAATGGATCTAATATGTATGTGTGTGTGTGTATATATTTGATTAGAAACAAATTTCATTGATATATGAAATTTACAAAAATGGATCTAATATTAAAACTCTTTTACTAAAATCTTTACTTTGCTTAGAACCTATGATCAAGAACTGTTGTGAAATAATGCCATTTAATTTAGATTGTGGAGCACAATGAAAGTGATAAATATGTTTTTCTATTCTCTTTTTAGGCCGAACTGTATAGAGTCATGAAAACATTTGACAAAGCAGAGCCCATGTATTTGGAAGCCATTAACATATTGGAGGAATCCTATGGCACTGAAGATATA

mRNA sequence

ATGTACACAAGGCAAGCAGCTTCAAAATGGTTAAAGAGATTAATCGTTCGCTCTACAGTACTCCATCGCACTTCCGAATCTCCCACGTCTCCCAATGTATCGATCTTGCCCTCCCGCTGCTACGCGAAATGTTCTTCGCGTAATAACGGCAATGGCTTTCATGATGGTTATCTCGATGGTTTTCCATGGGTTCTTTTGTCTGGACCTGCTGCAGCTATTATTCTGGGAATAAACTCAAATCCTGTCTTAGCTAAAGACACATCATTTAAGCCAAGTTCCGAAAATGGTATTGAGGACAGTGAGACTATTGGACTACGCAAAGTGGAGGACGGATCTGTGATATCAAATTTACATACTTCAAAGTGGAGGGTTTTTACTGATACTGCTCGGGACTTATTTCTGCAGGCAAGCAGTGGAAGACTTGAAGAAGCAGAAAAATATTTTATTTCTGCGATTCAAGAAGCTAAAGAAGGTTTTGGGGAGAGAGATCCCCATGTTGCATCTGCCTTCAACAATCTGGCCGAACTGTATAGAGTCATGAAAACATTTGACAAAGCAGAGCCCATGTATTTGGAAGCCATTAACATATTGGAGGAATCCTATGGCACTGAAGATATA

Coding sequence (CDS)

ATGTACACAAGGCAAGCAGCTTCAAAATGGTTAAAGAGATTAATCGTTCGCTCTACAGTACTCCATCGCACTTCCGAATCTCCCACGTCTCCCAATGTATCGATCTTGCCCTCCCGCTGCTACGCGAAATGTTCTTCGCGTAATAACGGCAATGGCTTTCATGATGGTTATCTCGATGGTTTTCCATGGGTTCTTTTGTCTGGACCTGCTGCAGCTATTATTCTGGGAATAAACTCAAATCCTGTCTTAGCTAAAGACACATCATTTAAGCCAAGTTCCGAAAATGGTATTGAGGACAGTGAGACTATTGGACTACGCAAAGTGGAGGACGGATCTGTGATATCAAATTTACATACTTCAAAGTGGAGGGTTTTTACTGATACTGCTCGGGACTTATTTCTGCAGGCAAGCAGTGGAAGACTTGAAGAAGCAGAAAAATATTTTATTTCTGCGATTCAAGAAGCTAAAGAAGGTTTTGGGGAGAGAGATCCCCATGTTGCATCTGCCTTCAACAATCTGGCCGAACTGTATAGAGTCATGAAAACATTTGACAAAGCAGAGCCCATGTATTTGGAAGCCATTAACATATTGGAGGAATCCTATGGCACTGAAGATATA

Protein sequence

MYTRQAASKWLKRLIVRSTVLHRTSESPTSPNVSILPSRCYAKCSSRNNGNGFHDGYLDGFPWVLLSGPAAAIILGINSNPVLAKDTSFKPSSENGIEDSETIGLRKVEDGSVISNLHTSKWRVFTDTARDLFLQASSGRLEEAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGTEDI

Homology

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BLAST of ClCG05G010660 vs. Swiss-Prot
Match: APBP2_MOUSE (Amyloid protein-binding protein 2 OS=Mus musculus GN=Appbp2 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.8e-07
Identity = 33/98 (33.67%), Postives = 54/98 (55.10%), Query Frame = 1


Query: 109 EDGSVISNLHTSKWRVFTDTARDLFLQASSGRL-EEAEKYFISAIQEAKEGFGERDPHVA 168
           ED  ++++    K  +  + A D   + +  RL +EA    +S++Q AK+ FGE +   A
Sbjct: 370 EDHLLLASSKRVKALILEEIAIDCHNKETEQRLLQEAHDLHLSSLQLAKKAFGEFNVQTA 429

Query: 169 SAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGTED 206
             + NL  LY+ M+ F +AE M+++AI I E+  G ED
Sbjct: 430 KHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQED 467

HSP 2 Score: 42.0 bits (97), Expect = 9.4e-03
Identity = 25/70 (35.71%), Postives = 38/70 (54.29%), Query Frame = 1


Query: 134 LQASSGRLEEAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRV-MKTFDKAEPMYLE 193
           L  S  + +EAE+  I AIQ  ++  G+ D  VA +  +LA LY   M  ++ AE +YL 
Sbjct: 438 LYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGHLASLYNYDMNQYENAEKLYLR 497

Query: 194 AINILEESYG 203
           +I I ++ +G
Sbjct: 498 SIAIGKKLFG 507

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BLAST of ClCG05G010660 vs. Swiss-Prot
Match: APBP2_RAT (Amyloid protein-binding protein 2 OS=Rattus norvegicus GN=Appbp2 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.8e-07
Identity = 33/98 (33.67%), Postives = 54/98 (55.10%), Query Frame = 1


Query: 109 EDGSVISNLHTSKWRVFTDTARDLFLQASSGRL-EEAEKYFISAIQEAKEGFGERDPHVA 168
           ED  ++++    K  +  + A D   + +  RL +EA    +S++Q AK+ FGE +   A
Sbjct: 370 EDHLLLASSKRVKALILEEIAIDCHNKETEQRLLQEAHDLHLSSLQLAKKAFGEFNVQTA 429

Query: 169 SAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGTED 206
             + NL  LY+ M+ F +AE M+++AI I E+  G ED
Sbjct: 430 KHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQED 467

HSP 2 Score: 42.0 bits (97), Expect = 9.4e-03
Identity = 25/70 (35.71%), Postives = 38/70 (54.29%), Query Frame = 1


Query: 134 LQASSGRLEEAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRV-MKTFDKAEPMYLE 193
           L  S  + +EAE+  I AIQ  ++  G+ D  VA +  +LA LY   M  ++ AE +YL 
Sbjct: 438 LYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGHLASLYNYDMNQYENAEKLYLR 497

Query: 194 AINILEESYG 203
           +I I ++ +G
Sbjct: 498 SIAIGKKLFG 507

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BLAST of ClCG05G010660 vs. Swiss-Prot
Match: APBP2_HUMAN (Amyloid protein-binding protein 2 OS=Homo sapiens GN=APPBP2 PE=1 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 4.8e-07
Identity = 33/98 (33.67%), Postives = 54/98 (55.10%), Query Frame = 1


Query: 109 EDGSVISNLHTSKWRVFTDTARDLFLQASSGRL-EEAEKYFISAIQEAKEGFGERDPHVA 168
           ED  ++++    K  +  + A D   + +  RL +EA    +S++Q AK+ FGE +   A
Sbjct: 370 EDHLLLASSKRVKALILEEIAIDCHNKETEQRLLQEAHDLHLSSLQLAKKAFGEFNVQTA 429

Query: 169 SAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGTED 206
             + NL  LY+ M+ F +AE M+++AI I E+  G ED
Sbjct: 430 KHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQED 467

HSP 2 Score: 42.0 bits (97), Expect = 9.4e-03
Identity = 25/70 (35.71%), Postives = 38/70 (54.29%), Query Frame = 1


Query: 134 LQASSGRLEEAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRV-MKTFDKAEPMYLE 193
           L  S  + +EAE+  I AIQ  ++  G+ D  VA +  +LA LY   M  ++ AE +YL 
Sbjct: 438 LYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGHLASLYNYDMNQYENAEKLYLR 497

Query: 194 AINILEESYG 203
           +I I ++ +G
Sbjct: 498 SIAIGKKLFG 507

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BLAST of ClCG05G010660 vs. TrEMBL
Match: A0A0A0LA19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187310 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.4e-93
Identity = 175/206 (84.95%), Postives = 184/206 (89.32%), Query Frame = 1


Query: 1   MYTRQAASKWLKRLIVRSTVLHRTSESPTSPNVSILPSRCYAKCSSRNNGNGFHDGYLDG 60
           MYTRQAASKWLKRL  RST  H TS +P  PNVSI  SRC  K SSR N NG+HDGYL+ 
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHHTSGAPNFPNVSIFSSRCNGKSSSRKNSNGYHDGYLND 60

Query: 61  FPWVLLSGPAAAIILGINSNPVLAKDTSFKPSSENGIEDSETIGLRKVEDGSVISNLHTS 120
           FPWVLLSGPA+AIILGINSNPVLA++ SFKPSSENGIED ET+GLRKVEDGSV+SNLHTS
Sbjct: 61  FPWVLLSGPASAIILGINSNPVLAEEASFKPSSENGIEDGETVGLRKVEDGSVVSNLHTS 120

Query: 121 KWRVFTDTARDLFLQASSGRLEEAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM 180
           KWRVFTDTARDLFLQ   GRLE+AEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM
Sbjct: 121 KWRVFTDTARDLFLQ---GRLEDAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM 180

Query: 181 KTFDKAEPMYLEAINILEESYGTEDI 207
           KTFDKAEPMYLEAI ILEESYGTEDI
Sbjct: 181 KTFDKAEPMYLEAIKILEESYGTEDI 203

[Close]

BLAST of ClCG05G010660 vs. TrEMBL
Match: M1B0N3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013236 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.2e-52
Identity = 116/206 (56.31%), Postives = 147/206 (71.36%), Query Frame = 1


Query: 1   MYTRQAASKWLKRLIVRSTVLHRTSESPTSPNVSILPSRCYAKCSSRNNGNGFHDGYLDG 60
           M+ RQA++  +KR  +    L  T    +SP   +LP+    + SS     G+   + D 
Sbjct: 1   MFLRQASANLIKRFRISPQFLAATPLHRSSP--VLLPNAGQCRFSSELGSGGY---FSDS 60

Query: 61  FPWVLLSGPAAAIILGINSNPVLAKDTSFKPSSENGIEDSETIGLRKVEDGSVISNLHTS 120
           F W+ L GPAA +ILG+N +P LA++ S   ++ +   D E  GLRK+EDGSV+SN+HTS
Sbjct: 61  FRWIFLFGPAA-VILGVNVSPALAEEVSTPATAGSDGVDVEISGLRKIEDGSVVSNIHTS 120

Query: 121 KWRVFTDTARDLFLQASSGRLEEAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM 180
           KWRVFTD+ RDLFLQ   G+LEEAEK F+SA+QEAKEGFG+RDPHVASA+NNLAELYRV 
Sbjct: 121 KWRVFTDSGRDLFLQ---GKLEEAEKLFLSALQEAKEGFGDRDPHVASAYNNLAELYRVE 180

Query: 181 KTFDKAEPMYLEAINILEESYGTEDI 207
           K FDKAEPMYLEAI ILEES+G ED+
Sbjct: 181 KAFDKAEPMYLEAIIILEESFGQEDV 197

[Close]

BLAST of ClCG05G010660 vs. TrEMBL
Match: A0A0D2N740_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G082800 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.9e-51
Identity = 121/212 (57.08%), Postives = 151/212 (71.23%), Query Frame = 1


Query: 1   MYTRQAASKWLKRLIVRSTVLHRTSESPTSPNVSI---LPSRCYAKCSSRN---NGNGFH 60
           MY R+AA   L+R+ + S  +  TS SP + +++I   LP     K    N   NG+ + 
Sbjct: 1   MYLRKAAVSLLRRVRLPSHSIF-TSVSPPTTSMAIATPLPFSLSRKIQFPNQFGNGSSWS 60

Query: 61  DGYLDGFPWVLLSGPAAAIILGINSNPVLAKDTSFKPSSENGIEDSETIGLRKVEDGSVI 120
             Y D   W +LS   AAIILGIN +PV A D S + ++E+ I+ +   GLRK+EDGSVI
Sbjct: 61  TTYADPPIWTILS-IQAAIILGINVHPVFADDGSNQTNTESDIQGANISGLRKIEDGSVI 120

Query: 121 SNLHTSKWRVFTDTARDLFLQASSGRLEEAEKYFISAIQEAKEGFGERDPHVASAFNNLA 180
           SN+HTSKWR+FTD  RD FLQ   G+LEEAEK+F+SAIQEAKEGFGERDPHVASA NNLA
Sbjct: 121 SNVHTSKWRIFTDNGRDYFLQ---GKLEEAEKFFLSAIQEAKEGFGERDPHVASACNNLA 180

Query: 181 ELYRVMKTFDKAEPMYLEAINILEESYGTEDI 207
           ELYRV K FDKAEP+YL+AI ILEE++G+EDI
Sbjct: 181 ELYRVKKAFDKAEPLYLDAIRILEEAFGSEDI 207

[Close]

BLAST of ClCG05G010660 vs. TrEMBL
Match: A0A0V0IH18_SOLCH (Putative nephrocystin-3-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 6.5e-51
Identity = 115/211 (54.50%), Postives = 147/211 (69.67%), Query Frame = 1


Query: 1   MYTRQAASKWLKRL-----IVRSTVLHRTSESPTSPNVSILPSRCYAKCSSRNNGNGFHD 60
           M+ RQA++  +K+       + +  LHR+S         +LP+    + SS     G+  
Sbjct: 1   MFLRQASANLIKKXRXSXQSLAAXXLHRSSPV-------LLPNAGQCRFSSELGSGGY-- 60

Query: 61  GYLDGFPWVLLSGPAAAIILGINSNPVLAKDTSFKPSSENGIEDSETIGLRKVEDGSVIS 120
            + D F W+ L GPAA +ILG+N +P LA++ S   +  +   D E  GLRK+EDGSV+S
Sbjct: 61  -FSDSFRWIFLFGPAA-VILGVNVSPALAEEVSTPATXGSDGVDVEISGLRKIEDGSVVS 120

Query: 121 NLHTSKWRVFTDTARDLFLQASSGRLEEAEKYFISAIQEAKEGFGERDPHVASAFNNLAE 180
           N+HTSKWRVFTD+ RDLFLQ   G+LEEAEK F+SA+QEAKEGFG+RDPHVASA+NNLAE
Sbjct: 121 NIHTSKWRVFTDSGRDLFLQ---GKLEEAEKLFLSALQEAKEGFGDRDPHVASAYNNLAE 180

Query: 181 LYRVMKTFDKAEPMYLEAINILEESYGTEDI 207
           LYRV K FDKAEPMYLEAI ILEES+G ED+
Sbjct: 181 LYRVKKAFDKAEPMYLEAIIILEESFGQEDV 197

[Close]

BLAST of ClCG05G010660 vs. TrEMBL
Match: K4D5U4_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.5e-50
Identity = 114/206 (55.34%), Postives = 145/206 (70.39%), Query Frame = 1


Query: 1   MYTRQAASKWLKRLIVRSTVLHRTSESPTSPNVSILPSRCYAKCSSRNNGNGFHDGYLDG 60
           M  RQA++  +KR  +    L  T    +SP   +LP+    + SS     G+   + D 
Sbjct: 1   MLLRQASASLIKRFRISPKFLAATPLHRSSP--VLLPNAGQCRFSSELGSGGY---FSDS 60

Query: 61  FPWVLLSGPAAAIILGINSNPVLAKDTSFKPSSENGIEDSETIGLRKVEDGSVISNLHTS 120
           F W+ L GPAA +ILG+N +P LA++ S      +GI D E  GLRK+EDGSV+SN+HTS
Sbjct: 61  FRWIFLFGPAA-VILGVNVSPALAEEVS------DGI-DVEISGLRKIEDGSVVSNIHTS 120

Query: 121 KWRVFTDTARDLFLQASSGRLEEAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM 180
           KWRVFTD+ RD FLQ   G+L++AEK F++A+QEAKEGFG+RDPHVASA+NNLAELYRV 
Sbjct: 121 KWRVFTDSGRDFFLQ---GKLKKAEKLFLAALQEAKEGFGDRDPHVASAYNNLAELYRVK 180

Query: 181 KTFDKAEPMYLEAINILEESYGTEDI 207
           K FDKAEPMYLEAI ILEES+G ED+
Sbjct: 181 KAFDKAEPMYLEAIKILEESFGQEDV 190

[Close]

BLAST of ClCG05G010660 vs. TAIR10
Match: AT5G37590.1 (AT5G37590.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 188.7 bits (478), Expect = 3.5e-48
Identity = 107/192 (55.73%), Postives = 128/192 (66.67%), Query Frame = 1


Query: 22  HRTSESPTSPNVSIL-----PSRCYAKCSSRNNGNGFHDGY--LDGFPWVLLSGPAAAII 81
           HRTS S +S    I      P     + S +N+  G       LD   W++LSG AA  I
Sbjct: 15  HRTSRSFSSSRNLICTTFANPLSGKPRISYQNDYGGHRTNLHLLDSRLWIILSGQAA--I 74

Query: 82  LGINSNPVLAKDTSFKPSSENGIEDSETIGLRKVEDGSVISNLHTSKWRVFTDTARDLFL 141
           LG   N VLA+D S K  S + +++S   GL K+EDGSV+SN+HTSKWRVFTD+ RD F 
Sbjct: 75  LGFCGNTVLAEDESMKSKSGDNMDESGNTGLEKIEDGSVVSNIHTSKWRVFTDSGRDYFF 134

Query: 142 QASSGRLEEAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAI 201
           Q   G+LE AE+ F SAIQEAKEGFGE+DPHVASA NNLAELYRV K FDKAEP+YLEA+
Sbjct: 135 Q---GKLEPAERLFGSAIQEAKEGFGEKDPHVASACNNLAELYRVKKEFDKAEPLYLEAV 194

Query: 202 NILEESYGTEDI 207
           +ILEE YG +D+
Sbjct: 195 SILEEFYGPDDV 201

[Close]

BLAST of ClCG05G010660 vs. NCBI nr
Match: gi|659114569|ref|XP_008457119.1| (PREDICTED: kinesin light chain 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 357.1 bits (915), Expect = 2.1e-95
Identity = 178/206 (86.41%), Postives = 186/206 (90.29%), Query Frame = 1


Query: 1   MYTRQAASKWLKRLIVRSTVLHRTSESPTSPNVSILPSRCYAKCSSRNNGNGFHDGYLDG 60
           MYTRQAASKWLKRL  RST  H TSE+P  PNVSI  SRC  K SSR N NG+HDGYL+G
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRCNVKSSSRKNSNGYHDGYLNG 60

Query: 61  FPWVLLSGPAAAIILGINSNPVLAKDTSFKPSSENGIEDSETIGLRKVEDGSVISNLHTS 120
           FPWV LSGPAAAIILGINSNPVLA++ SFKPSSENGIED ET+GLRKVEDGSV+SNLHTS
Sbjct: 61  FPWVFLSGPAAAIILGINSNPVLAEEASFKPSSENGIEDGETVGLRKVEDGSVVSNLHTS 120

Query: 121 KWRVFTDTARDLFLQASSGRLEEAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM 180
           KWRVFTDTARDLFLQ   GRLE+AEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM
Sbjct: 121 KWRVFTDTARDLFLQ---GRLEDAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM 180

Query: 181 KTFDKAEPMYLEAINILEESYGTEDI 207
           KTFDKAEPMYLEAINILEESYGTEDI
Sbjct: 181 KTFDKAEPMYLEAINILEESYGTEDI 203

[Close]

BLAST of ClCG05G010660 vs. NCBI nr
Match: gi|659114571|ref|XP_008457120.1| (PREDICTED: kinesin light chain 3-like isoform X3 [Cucumis melo])

HSP 1 Score: 357.1 bits (915), Expect = 2.1e-95
Identity = 178/206 (86.41%), Postives = 186/206 (90.29%), Query Frame = 1


Query: 1   MYTRQAASKWLKRLIVRSTVLHRTSESPTSPNVSILPSRCYAKCSSRNNGNGFHDGYLDG 60
           MYTRQAASKWLKRL  RST  H TSE+P  PNVSI  SRC  K SSR N NG+HDGYL+G
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRCNVKSSSRKNSNGYHDGYLNG 60

Query: 61  FPWVLLSGPAAAIILGINSNPVLAKDTSFKPSSENGIEDSETIGLRKVEDGSVISNLHTS 120
           FPWV LSGPAAAIILGINSNPVLA++ SFKPSSENGIED ET+GLRKVEDGSV+SNLHTS
Sbjct: 61  FPWVFLSGPAAAIILGINSNPVLAEEASFKPSSENGIEDGETVGLRKVEDGSVVSNLHTS 120

Query: 121 KWRVFTDTARDLFLQASSGRLEEAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM 180
           KWRVFTDTARDLFLQ   GRLE+AEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM
Sbjct: 121 KWRVFTDTARDLFLQ---GRLEDAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM 180

Query: 181 KTFDKAEPMYLEAINILEESYGTEDI 207
           KTFDKAEPMYLEAINILEESYGTEDI
Sbjct: 181 KTFDKAEPMYLEAINILEESYGTEDI 203

[Close]

BLAST of ClCG05G010660 vs. NCBI nr
Match: gi|659114567|ref|XP_008457118.1| (PREDICTED: kinesin light chain 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 357.1 bits (915), Expect = 2.1e-95
Identity = 178/206 (86.41%), Postives = 186/206 (90.29%), Query Frame = 1


Query: 1   MYTRQAASKWLKRLIVRSTVLHRTSESPTSPNVSILPSRCYAKCSSRNNGNGFHDGYLDG 60
           MYTRQAASKWLKRL  RST  H TSE+P  PNVSI  SRC  K SSR N NG+HDGYL+G
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRCNVKSSSRKNSNGYHDGYLNG 60

Query: 61  FPWVLLSGPAAAIILGINSNPVLAKDTSFKPSSENGIEDSETIGLRKVEDGSVISNLHTS 120
           FPWV LSGPAAAIILGINSNPVLA++ SFKPSSENGIED ET+GLRKVEDGSV+SNLHTS
Sbjct: 61  FPWVFLSGPAAAIILGINSNPVLAEEASFKPSSENGIEDGETVGLRKVEDGSVVSNLHTS 120

Query: 121 KWRVFTDTARDLFLQASSGRLEEAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM 180
           KWRVFTDTARDLFLQ   GRLE+AEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM
Sbjct: 121 KWRVFTDTARDLFLQ---GRLEDAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM 180

Query: 181 KTFDKAEPMYLEAINILEESYGTEDI 207
           KTFDKAEPMYLEAINILEESYGTEDI
Sbjct: 181 KTFDKAEPMYLEAINILEESYGTEDI 203

[Close]

BLAST of ClCG05G010660 vs. NCBI nr
Match: gi|700202324|gb|KGN57457.1| (hypothetical protein Csa_3G187310 [Cucumis sativus])

HSP 1 Score: 350.5 bits (898), Expect = 2.0e-93
Identity = 175/206 (84.95%), Postives = 184/206 (89.32%), Query Frame = 1


Query: 1   MYTRQAASKWLKRLIVRSTVLHRTSESPTSPNVSILPSRCYAKCSSRNNGNGFHDGYLDG 60
           MYTRQAASKWLKRL  RST  H TS +P  PNVSI  SRC  K SSR N NG+HDGYL+ 
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHHTSGAPNFPNVSIFSSRCNGKSSSRKNSNGYHDGYLND 60

Query: 61  FPWVLLSGPAAAIILGINSNPVLAKDTSFKPSSENGIEDSETIGLRKVEDGSVISNLHTS 120
           FPWVLLSGPA+AIILGINSNPVLA++ SFKPSSENGIED ET+GLRKVEDGSV+SNLHTS
Sbjct: 61  FPWVLLSGPASAIILGINSNPVLAEEASFKPSSENGIEDGETVGLRKVEDGSVVSNLHTS 120

Query: 121 KWRVFTDTARDLFLQASSGRLEEAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM 180
           KWRVFTDTARDLFLQ   GRLE+AEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM
Sbjct: 121 KWRVFTDTARDLFLQ---GRLEDAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM 180

Query: 181 KTFDKAEPMYLEAINILEESYGTEDI 207
           KTFDKAEPMYLEAI ILEESYGTEDI
Sbjct: 181 KTFDKAEPMYLEAIKILEESYGTEDI 203

[Close]

BLAST of ClCG05G010660 vs. NCBI nr
Match: gi|778679900|ref|XP_011651210.1| (PREDICTED: uncharacterized protein LOC101207905 isoform X1 [Cucumis sativus])

HSP 1 Score: 350.5 bits (898), Expect = 2.0e-93
Identity = 175/206 (84.95%), Postives = 184/206 (89.32%), Query Frame = 1


Query: 1   MYTRQAASKWLKRLIVRSTVLHRTSESPTSPNVSILPSRCYAKCSSRNNGNGFHDGYLDG 60
           MYTRQAASKWLKRL  RST  H TS +P  PNVSI  SRC  K SSR N NG+HDGYL+ 
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHHTSGAPNFPNVSIFSSRCNGKSSSRKNSNGYHDGYLND 60

Query: 61  FPWVLLSGPAAAIILGINSNPVLAKDTSFKPSSENGIEDSETIGLRKVEDGSVISNLHTS 120
           FPWVLLSGPA+AIILGINSNPVLA++ SFKPSSENGIED ET+GLRKVEDGSV+SNLHTS
Sbjct: 61  FPWVLLSGPASAIILGINSNPVLAEEASFKPSSENGIEDGETVGLRKVEDGSVVSNLHTS 120

Query: 121 KWRVFTDTARDLFLQASSGRLEEAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM 180
           KWRVFTDTARDLFLQ   GRLE+AEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM
Sbjct: 121 KWRVFTDTARDLFLQ---GRLEDAEKYFISAIQEAKEGFGERDPHVASAFNNLAELYRVM 180

Query: 181 KTFDKAEPMYLEAINILEESYGTEDI 207
           KTFDKAEPMYLEAI ILEESYGTEDI
Sbjct: 181 KTFDKAEPMYLEAIKILEESYGTEDI 203

The following BLAST results are available for this feature:

BLAST of ClCG05G010660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
APBP2_MOUSE	4.8e-07	33.67	Amyloid protein-binding protein 2 OS=Mus musculus GN=Appbp2 PE=2 SV=1	[more]
APBP2_RAT	4.8e-07	33.67	Amyloid protein-binding protein 2 OS=Rattus norvegicus GN=Appbp2 PE=2 SV=1	[more]
APBP2_HUMAN	4.8e-07	33.67	Amyloid protein-binding protein 2 OS=Homo sapiens GN=APPBP2 PE=1 SV=2	[more]

BLAST of ClCG05G010660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA19_CUCSA	1.4e-93	84.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187310 PE=4 SV=1	[more]
M1B0N3_SOLTU	1.2e-52	56.31	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013236 PE=4 SV=1	[more]
A0A0D2N740_GOSRA	2.9e-51	57.08	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G082800 PE=4 SV=1	[more]
A0A0V0IH18_SOLCH	6.5e-51	54.50	Putative nephrocystin-3-like OS=Solanum chacoense PE=4 SV=1	[more]
K4D5U4_SOLLC	5.5e-50	55.34	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of ClCG05G010660 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G37590.1	3.5e-48	55.73	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of ClCG05G010660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114569\|ref\|XP_008457119.1\|	2.1e-95	86.41	PREDICTED: kinesin light chain 3-like isoform X2 [Cucumis melo]	[more]
gi\|659114571\|ref\|XP_008457120.1\|	2.1e-95	86.41	PREDICTED: kinesin light chain 3-like isoform X3 [Cucumis melo]	[more]
gi\|659114567\|ref\|XP_008457118.1\|	2.1e-95	86.41	PREDICTED: kinesin light chain 1-like isoform X1 [Cucumis melo]	[more]
gi\|700202324\|gb\|KGN57457.1\|	2.0e-93	84.95	hypothetical protein Csa_3G187310 [Cucumis sativus]	[more]
gi\|778679900\|ref\|XP_011651210.1\|	2.0e-93	84.95	PREDICTED: uncharacterized protein LOC101207905 isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom
IPR019734	TPR_repeat

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006412	translation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005840	ribosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G010660.1	ClCG05G010660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 137..196 score: 2.
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 136..200 score: 5.6
IPR013026	Tetratricopeptide repeat-containing domain	PROFILE	PS50293	TPR_REGION	coord: 167..200 score: 8
IPR019734	Tetratricopeptide repeat	PROFILE	PS50005	TPR	coord: 167..200 score: 8
None	No IPR available	PANTHER	PTHR19959	KINESIN LIGHT CHAIN	coord: 139..206 score: 1.5
None	No IPR available	PANTHER	PTHR19959:SF159	TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN	coord: 139..206 score: 1.5
None	No IPR available	PFAM	PF13424	TPR_12	coord: 138..199 score: 8.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G010660	Csa3G187310	Cucumber (Chinese Long) v2	cuwcgB230
ClCG05G010660	Cla013138	Watermelon (97103) v1	wcgwmB286
ClCG05G010660	CSPI03G17730	Wild cucumber (PI 183967)	cpiwcgB237
ClCG05G010660	Lsi05G002740	Bottle gourd (USVL1VR-Ls)	lsiwcgB332
ClCG05G010660	Cp4.1LG02g16660	Cucurbita pepo (Zucchini)	cpewcgB518
ClCG05G010660	CsGy3G017720	Cucumber (Gy14) v2	cgybwcgB214
ClCG05G010660	MELO3C032021.2	Melon (DHL92) v3.6.1	medwcgB417
ClCG05G010660	Carg07428	Silver-seed gourd	carwcgB0739

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G010660	Silver-seed gourd	carwcgB0168
ClCG05G010660	Cucumber (Chinese Long) v3	cucwcgB238
ClCG05G010660	Watermelon (97103) v2	wcgwmbB229
ClCG05G010660	Wax gourd	wcgwgoB427
ClCG05G010660	Cucumber (Gy14) v1	cgywcgB153
ClCG05G010660	Cucurbita maxima (Rimu)	cmawcgB234
ClCG05G010660	Cucurbita maxima (Rimu)	cmawcgB407
ClCG05G010660	Cucurbita moschata (Rifu)	cmowcgB220
ClCG05G010660	Cucurbita moschata (Rifu)	cmowcgB406
ClCG05G010660	Melon (DHL92) v3.5.1	mewcgB427
ClCG05G010660	Cucurbita pepo (Zucchini)	cpewcgB560