MELO3C032021.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C032021.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Unknown protein
Location	chr06 : 14028175 .. 14029244 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTAGCTTCCAAGCAAACTCGCTTAAGTCCTCCTTAAGCATGTCACATTGCCCATGCCATACTTAACCATGCCGTTTAGTCCCTTTGGTCGAGCCATAAGCTTGCTTCTTATGTCTTGTCGTCTAATCATGTCTTAGCACAACATAACGCCTAGGGCATTTGAAATCCCTTTTCTTAGCTGTCTAGGACAACCTCCTAGATCCTTTAATGCTCATCTCACCTAACAGAATACTTGGCCAAATATCACCTCCCCTTACTTTGGTCGCCTAGATATTCAAATGGTCATTCTTCACGCCATACTTAGACACTATTTTGGCCGCATAGAGGTTGTGTTGGTCTTTGGCCGCATGACACCCTCTTACTCACCTAGCCAACAAGTTAACCAATTTTCCACACACTCCTCCTCTTTTGGCCGCATACATCAACTCTTTAAGCCTTGTCAACCTTGCTTGGGTGCAAACCTAAGGATCACACACATAACACTAAGACTATATTCCTACAAATTTCAACCATCTCACTTTGCCATAATTCCCTTTCCTAACCTTAATTAACTCTTCATCAAAGAATTTAGCAACAATAAAACCAAATTTTATAAAATCATTGAACTAAAGAAATAGCAAGGCTAAGGGTTTACATGATTACAATTACACTTTAAACTTTTATTTATAAAGATTGATTCCTCAAACTCATACCAACATTAGAAATGGACCATCGAACTTACGCAACCGTACAAATTATAACAATCATTTAAGTGTGATGGATCAACTTTGTTATTGTTTAATGTTTTATTTTTTTATTTTTTATTCTGTTTTTTATTTTCTGTTTACTCTTTTTAAGAGTAAGGAAAACCGTACCGTACAGCTAAAACCCCTTTAAACCCTTCTCGTCTTCCTCTCCACCTACCTTCCATTCTATTCCATATCACTCGAGGCAAAGCAGAGATGTACACCAGACAAGCAGCTTCAAAATGGTTAAAGAGATTAAGCTTTCGCTCTACAGCATTTCATCTCACTTCGGAAGCTCCCAATCTTCCTAACGTATCAATCTTCTCTTCTCGCTGTACGTAA

mRNA sequence

ATGCCTAGCTTCCAAGCAAACTCGCTTAAGTCCTCCTTAAGCATATTGATTCCTCAAACTCATACCAACATTAGAAATGGACCATCGAACTTACGCAACCGTACAAATTATAACAATCATTTAAGAAAACCGTACCGTACAGCTAAAACCCCTTTAAACCCTTCTCGTCTTCCTCTCCACCTACCTTCCATTCTATTCCATATCACTCGAGGCAAAGCAGAGATGTACACCAGACAAGCAGCTTCAAAATGGTTAAAGAGATTAAGCTTTCGCTCTACAGCATTTCATCTCACTTCGGAAGCTCCCAATCTTCCTAACGTATCAATCTTCTCTTCTCGCTGTACGTAA

Coding sequence (CDS)

ATGCCTAGCTTCCAAGCAAACTCGCTTAAGTCCTCCTTAAGCATATTGATTCCTCAAACTCATACCAACATTAGAAATGGACCATCGAACTTACGCAACCGTACAAATTATAACAATCATTTAAGAAAACCGTACCGTACAGCTAAAACCCCTTTAAACCCTTCTCGTCTTCCTCTCCACCTACCTTCCATTCTATTCCATATCACTCGAGGCAAAGCAGAGATGTACACCAGACAAGCAGCTTCAAAATGGTTAAAGAGATTAAGCTTTCGCTCTACAGCATTTCATCTCACTTCGGAAGCTCCCAATCTTCCTAACGTATCAATCTTCTCTTCTCGCTGTACGTAA

Protein sequence

MPSFQANSLKSSLSILIPQTHTNIRNGPSNLRNRTNYNNHLRKPYRTAKTPLNPSRLPLHLPSILFHITRGKAEMYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRCT

Homology

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BLAST of MELO3C032021.2 vs. NCBI nr
Match: XP_008457118.2 (PREDICTED: uncharacterized protein LOC103496867 [Cucumis melo])

HSP 1 Score: 83.6 bits (205), Expect = 4.9e-13
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 40

[Close]

BLAST of MELO3C032021.2 vs. NCBI nr
Match: KGN57457.1 (hypothetical protein Csa_3G187310 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 6.0e-11
Identity = 37/40 (92.50%), Postives = 37/40 (92.50%), Query Frame = 0


Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTRQAASKWLKRLSFRSTAFH TS APN PNVSIFSSRC
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHHTSGAPNFPNVSIFSSRC 40

[Close]

BLAST of MELO3C032021.2 vs. NCBI nr
Match: XP_011651210.1 (PREDICTED: uncharacterized protein LOC101207905 isoform X1 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 6.0e-11
Identity = 37/40 (92.50%), Postives = 37/40 (92.50%), Query Frame = 0


Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTRQAASKWLKRLSFRSTAFH TS APN PNVSIFSSRC
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHHTSGAPNFPNVSIFSSRC 40

[Close]

BLAST of MELO3C032021.2 vs. NCBI nr
Match: XP_022143433.1 (uncharacterized protein LOC111013309 isoform X2 [Momordica charantia])

HSP 1 Score: 64.3 bits (155), Expect = 3.1e-07
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 0


Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTR+AAS+WLKRL+FRST F+ TSEAP   NVSIFSSRC
Sbjct: 1   MYTRRAASQWLKRLTFRSTTFNRTSEAPTSINVSIFSSRC 40

[Close]

BLAST of MELO3C032021.2 vs. NCBI nr
Match: XP_022143432.1 (kinesin light chain 1 isoform X1 [Momordica charantia])

HSP 1 Score: 64.3 bits (155), Expect = 3.1e-07
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 0


Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTR+AAS+WLKRL+FRST F+ TSEAP   NVSIFSSRC
Sbjct: 1   MYTRRAASQWLKRLTFRSTTFNRTSEAPTSINVSIFSSRC 40

[Close]

BLAST of MELO3C032021.2 vs. TrEMBL
Match: tr|A0A1S3C5G7|A0A1S3C5G7_CUCME (uncharacterized protein LOC103496867 OS=Cucumis melo OX=3656 GN=LOC103496867 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.2e-13
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 40

[Close]

BLAST of MELO3C032021.2 vs. TrEMBL
Match: tr|A0A0A0LA19|A0A0A0LA19_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G187310 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.0e-11
Identity = 37/40 (92.50%), Postives = 37/40 (92.50%), Query Frame = 0


Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTRQAASKWLKRLSFRSTAFH TS APN PNVSIFSSRC
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHHTSGAPNFPNVSIFSSRC 40

The following BLAST results are available for this feature:

BLAST of MELO3C032021.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457118.2	4.9e-13	100.00	PREDICTED: uncharacterized protein LOC103496867 [Cucumis melo]	[more]
KGN57457.1	6.0e-11	92.50	hypothetical protein Csa_3G187310 [Cucumis sativus]	[more]
XP_011651210.1	6.0e-11	92.50	PREDICTED: uncharacterized protein LOC101207905 isoform X1 [Cucumis sativus]	[more]
XP_022143433.1	3.1e-07	77.50	uncharacterized protein LOC111013309 isoform X2 [Momordica charantia]	[more]
XP_022143432.1	3.1e-07	77.50	kinesin light chain 1 isoform X1 [Momordica charantia]	[more]

BLAST of MELO3C032021.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C032021.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C032021.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C5G7\|A0A1S3C5G7_CUCME	3.2e-13	100.00	uncharacterized protein LOC103496867 OS=Cucumis melo OX=3656 GN=LOC103496867 PE=...	[more]
tr\|A0A0A0LA19\|A0A0A0LA19_CUCSA	4.0e-11	92.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G187310 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032021.2.1	MELO3C032021.2.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C032021.2	Cla013138	Watermelon (97103) v1	medwmB448
MELO3C032021.2	ClCG05G010660	Watermelon (Charleston Gray)	medwcgB417

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C032021.2	Cucumber (Gy14) v2	cgybmedB215
MELO3C032021.2	Cucumber (Gy14) v1	cgymedB144
MELO3C032021.2	Cucurbita maxima (Rimu)	cmamedB274
MELO3C032021.2	Cucurbita maxima (Rimu)	cmamedB496
MELO3C032021.2	Cucurbita moschata (Rifu)	cmomedB261
MELO3C032021.2	Cucurbita moschata (Rifu)	cmomedB483
MELO3C032021.2	Cucurbita pepo (Zucchini)	cpemedB630
MELO3C032021.2	Cucurbita pepo (Zucchini)	cpemedB694
MELO3C032021.2	Wild cucumber (PI 183967)	cpimedB239
MELO3C032021.2	Cucumber (Chinese Long) v2	cumedB238
MELO3C032021.2	Bottle gourd (USVL1VR-Ls)	lsimedB384
MELO3C032021.2	Silver-seed gourd	carmedB0185
MELO3C032021.2	Silver-seed gourd	carmedB0771
MELO3C032021.2	Cucumber (Chinese Long) v3	cucmedB246
MELO3C032021.2	Watermelon (97103) v2	medwmbB424
MELO3C032021.2	Wax gourd	medwgoB531