ClCG05G006290 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G006290
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionEthylene-responsive transcription factor 3
LocationCG_Chr05 : 6260333 .. 6261948 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCACACGCTCCTTTTTCTCAAATTCTCTCCCTCTCAACTTCAACCAACATGTGCGGCGGAGCTATCATCTCAGATTACGTCGACAACCTCCTCTGGCCTCACCTCGACACCACCTTCTCTGACCTCCTCGGCCTCGACCTCGACCTTGACCTCGACCTTTCCACCCAAAACTACCCCTTCAACAACACTCCTTCCATTGTTGTAGAGACCCCCAAACAACTCCCTCAAGGTACACATACACTACTCTCTCTACTTTCTAAAATTTTTTTGTGTTCTTTTCCTTCCAATCTCTAATTTAACTAATTTTGCATCATCCATAAATATTTATAGGAATTTGAACTTTTTAAAAAATGAGAAGAAAAAATTCCTGATTGTTTGAAAATTGGGTAGAGGTTTAACAAGTAGAAATGAATAATAATTGAGGAAATGACATATAAGAGTCTATTGTGATTTTTTCAAAACCTTTTTATTATGGCGATTAACATTGTTACTATGAATTTGTATAAAGATGACATTATAAGAGTTTATTGTAAGAATATTATTATTATTATTTAACTAATTTCAATAAAAATTAACTTTAAATATTCTCAAATCAAATTACTACATGTACAATTAATTAAAAGTAAAGAGACTAAAATTGAAAAAGCTGGAAATTACATAGATTATTATAATATTTTAATCAATTTAAGAGTGATTCATCAACTTTAAAAGTGGAATAATAGAGAGATTTTCATTTTAATTAAAAAATAGGATTTAATGTTTTGTGATAAGAAATGGTTAAAGTAGTAATTGGGTATTATTATTACTGTGAATATTTAGTGAAAAGTGAGAAAGTAGAAGGAAGTGAAGCAGCCGGAAGTGCAATGAAGAAGACTAAAAAGGTTCGGAAAAGCAAATATAGAGGGATCAGGCAGCGACCATGGGGAAAATGGGCTGCCGAGATTCGAGACCCACAAAAGGGACTACGTGTTTGGCTCGGTACCTACAACACTGCCGAAGAAGCAGCCAGAGCCTATGACCAAGCCGCCATAAGAATCAGAGGCAAAAAGGCCAAACTCAACTTCACTCAACCCCCACCGCTGCCGCTACCCTCACCACCACCACAACAGCTCCCCACCACCTCCACCCCCATCGACATCCAACTCAAACACCAAATCTCGTCTTTGGAATCATTCCTCGGTCTCGACCCCTCACTGCCAGTGGAACCCATGGCAGACCCCTGGTGGGTGGATGACCTTCTCATATATCAACAACAAAACCTCCAACTCTAACTCTAAACACCCAAAATAAAACTAATAATAATACTTACCTCGTTTTCTACTAGTAATAATCTCCTACTCATCACCCTTAAAAATTTGACACTAAAAAAAAGAGTGAAACAAATGTCAAATTTTTTTACAAGTGTAATTTAGTAGGAAGATTATATTACTAACGAGTCAATAAGTAAGTATTATTTATTAGAAAAATCCCAACTTTGGTTAATATAAGAAAGGGATTTGTGTAGCTCGCTTTAGTTGGGTTTTGGTGTACACATTTTAGTTATAATATGGTGTGTGTTTATGACCTTTGTGTTGTGGATCAGACACAAGTTTATAAATGTTAATTAAGGTTTTTTG

mRNA sequence

CCACACGCTCCTTTTTCTCAAATTCTCTCCCTCTCAACTTCAACCAACATGTGCGGCGGAGCTATCATCTCAGATTACGTCGACAACCTCCTCTGGCCTCACCTCGACACCACCTTCTCTGACCTCCTCGGCCTCGACCTCGACCTTGACCTCGACCTTTCCACCCAAAACTACCCCTTCAACAACACTCCTTCCATTGTTGTAGAGACCCCCAAACAACTCCCTCAAGTGAAAAGTGAGAAAGTAGAAGGAAGTGAAGCAGCCGGAAGTGCAATGAAGAAGACTAAAAAGGTTCGGAAAAGCAAATATAGAGGGATCAGGCAGCGACCATGGGGAAAATGGGCTGCCGAGATTCGAGACCCACAAAAGGGACTACGTGTTTGGCTCGGTACCTACAACACTGCCGAAGAAGCAGCCAGAGCCTATGACCAAGCCGCCATAAGAATCAGAGGCAAAAAGGCCAAACTCAACTTCACTCAACCCCCACCGCTGCCGCTACCCTCACCACCACCACAACAGCTCCCCACCACCTCCACCCCCATCGACATCCAACTCAAACACCAAATCTCGTCTTTGGAATCATTCCTCGGTCTCGACCCCTCACTGCCAGTGGAACCCATGGCAGACCCCTGGTGGGTGGATGACCTTCTCATATATCAACAACAAAACCTCCAACTCTAACTCTAAACACCCAAAATAAAACTAATAATAATACTTACCTCGTTTTCTACTAGTAATAATCTCCTACTCATCACCCTTAAAAATTTGACACTAAAAAAAAGAGTGAAACAAATGTCAAATTTTTTTACAAGTGTAATTTAGTAGGAAGATTATATTACTAACGAGTCAATAAGTAAGTATTATTTATTAGAAAAATCCCAACTTTGGTTAATATAAGAAAGGGATTTGTGTAGCTCGCTTTAGTTGGGTTTTGGTGTACACATTTTAGTTATAATATGGTGTGTGTTTATGACCTTTGTGTTGTGGATCAGACACAAGTTTATAAATGTTAATTAAGGTTTTTTG

Coding sequence (CDS)

ATGTGCGGCGGAGCTATCATCTCAGATTACGTCGACAACCTCCTCTGGCCTCACCTCGACACCACCTTCTCTGACCTCCTCGGCCTCGACCTCGACCTTGACCTCGACCTTTCCACCCAAAACTACCCCTTCAACAACACTCCTTCCATTGTTGTAGAGACCCCCAAACAACTCCCTCAAGTGAAAAGTGAGAAAGTAGAAGGAAGTGAAGCAGCCGGAAGTGCAATGAAGAAGACTAAAAAGGTTCGGAAAAGCAAATATAGAGGGATCAGGCAGCGACCATGGGGAAAATGGGCTGCCGAGATTCGAGACCCACAAAAGGGACTACGTGTTTGGCTCGGTACCTACAACACTGCCGAAGAAGCAGCCAGAGCCTATGACCAAGCCGCCATAAGAATCAGAGGCAAAAAGGCCAAACTCAACTTCACTCAACCCCCACCGCTGCCGCTACCCTCACCACCACCACAACAGCTCCCCACCACCTCCACCCCCATCGACATCCAACTCAAACACCAAATCTCGTCTTTGGAATCATTCCTCGGTCTCGACCCCTCACTGCCAGTGGAACCCATGGCAGACCCCTGGTGGGTGGATGACCTTCTCATATATCAACAACAAAACCTCCAACTCTAA

Protein sequence

MCGGAIISDYVDNLLWPHLDTTFSDLLGLDLDLDLDLSTQNYPFNNTPSIVVETPKQLPQVKSEKVEGSEAAGSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAARAYDQAAIRIRGKKAKLNFTQPPPLPLPSPPPQQLPTTSTPIDIQLKHQISSLESFLGLDPSLPVEPMADPWWVDDLLIYQQQNLQL
Homology
[Close]
BLAST of ClCG05G006290 vs. Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 2.9e-31
Identity = 101/254 (39.76%), Postives = 124/254 (48.82%), Query Frame = 1 

Query: 1   MCGGAIISDYVDNLLWPHLDTTFSDLLGLDLDLDLDLSTQN--YPFNNTPSIVVETPKQL 60
           MCGGAIISDY   +           L   +L  +LD S  +  + F +T  +    P   
Sbjct: 1   MCGGAIISDYAPLVT----KAKGRKLTAEELWSELDASAADDFWGFYSTSKL---HPTNQ 60

Query: 61  PQVKSEKVEGSEAAGSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNT 120
             VK E V+  +A     ++    RK+ YRGIR+RPWGKWAAEIRDP+KG+RVWLGT+NT
Sbjct: 61  VNVKEEAVKKEQATEPGKRRK---RKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNT 120

Query: 121 AEEAARAYDQAAIRIRGKKAKLNFTQ---PPP---LPLPSPP-----------------P 180
           AEEAA AYD AA +IRG KAKLNF     PPP    P PS P                  
Sbjct: 121 AEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKVCVVSQSE 180

Query: 181 QQLPTTSTPI--------------------DIQLKHQISSLESFLGLDPSLPVEPM---- 202
            +L   S P+                    D  LK QISSLESFL LD +   +P     
Sbjct: 181 SELSQPSFPVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLESFLELDGNTAEQPSQLDE 240

[Close]
BLAST of ClCG05G006290 vs. Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-29
Identity = 86/238 (36.13%), Postives = 113/238 (47.48%), Query Frame = 1 

Query: 1   MCGGAIISDYV---------DNLLWPHLDTT---------------------------FS 60
           MCGGAIISD++            +WP L                              F 
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFK 60

Query: 61  DLLGLDLDLDLDLS-----TQNYPFNNTPSIVVETPKQLPQVKSEKVEGSEAAGSAMKKT 120
           D   +D D D D+       + + F +TP   V    +   V  +KV G +  G A K  
Sbjct: 61  DDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAE-GSVFGKKVTGLD--GDAEKSA 120

Query: 121 KKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAARAYDQAAIRIRGKKAK 176
            + RK++YRGIRQRPWGKWAAEIRDP++G R+WLGT+ TAEEAARAYD AA RIRG KAK
Sbjct: 121 NRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAK 180

[Close]
BLAST of ClCG05G006290 vs. Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=1 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 3.9e-28
Identity = 82/204 (40.20%), Postives = 101/204 (49.51%), Query Frame = 1 

Query: 1   MCGGAIISDYV---------DNLLWPHLDTTF----------SDLLGLDLDLDLDLS--- 60
           MCGGAIISD++         +  +WP L              SD   LD D + D     
Sbjct: 1   MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFK 60

Query: 61  ---------TQNYPFNNTPSIVVETPKQLPQV----------KSEKVEGSEAAGSAMKKT 120
                      +   N  P +   T K +              +   +  E+A  A K +
Sbjct: 61  DDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSS 120

Query: 121 KKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAARAYDQAAIRIRGKKAK 164
           K+ RK++YRGIRQRPWGKWAAEIRDP+KG R WLGT++TAEEAARAYD AA RIRG KAK
Sbjct: 121 KRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAK 180

[Close]
BLAST of ClCG05G006290 vs. Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.7e-26
Identity = 54/74 (72.97%), Postives = 62/74 (83.78%), Query Frame = 1 

Query: 73  GSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAARAYDQAAIR 132
           G A K  K+ RK+++RGIRQRPWGKWAAEIRDP+KG+RVWLGT+N+AEEAARAYD  A R
Sbjct: 106 GPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARR 165

Query: 133 IRGKKAKLNFTQPP 147
           IRGKKAK+NF + P
Sbjct: 166 IRGKKAKVNFPEAP 179

[Close]
BLAST of ClCG05G006290 vs. Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-25
Identity = 72/155 (46.45%), Postives = 87/155 (56.13%), Query Frame = 1 

Query: 55  PKQLPQVKSEKVEGSEAAGSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 114
           P QL  V S K +    + S  +  K+ RK+ YRGIRQRPWGKWAAEIRDP KG+RVWLG
Sbjct: 19  PSQLGSVSSRK-KRKPVSVSEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLG 78

Query: 115 TYNTAEEAARAYDQAAIRIRGKKAKLNF--TQPPPLPLPSPPPQQLPTTSTPIDIQLKHQ 174
           T+ TA+EAARAYD AAI+IRG+KAKLNF  TQ        P   Q    S      L   
Sbjct: 79  TFKTADEAARAYDVAAIKIRGRKAKLNFPNTQVEEEADTKPGGNQNELISENQVESLSED 138

Query: 175 ISSLESFLGLDPSLPVEPMADPWWVDDLLIYQQQN 208
           + +LE ++     +PV        + +L  YQ  N
Sbjct: 139 LMALEDYMRF-YQIPVADDQSATDIGNLWSYQDSN 171

[Close]
BLAST of ClCG05G006290 vs. TrEMBL
Match: A0A0A0L7Z6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G164580 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 4.1e-85
Identity = 173/231 (74.89%), Postives = 181/231 (78.35%), Query Frame = 1 

Query: 1   MCGGAIISDYV-------DNLLWPHLDTTFSDLLGLDLDLDLDLSTQNYPFNNT--PSIV 60
           MCGGAIISDYV       DNLLWP LDTTFSDLLGLDL       TQNYPFNNT  P++V
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTFSDLLGLDLITQ----TQNYPFNNTTSPNVV 60

Query: 61  VET-PKQLPQVKSEKVEGSEAAGSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGLR 120
               PKQL QVK EKVEG+E     MKK +KVRKSKYRGIRQRPWGKWAAEIRDP+KGLR
Sbjct: 61  DNNIPKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLR 120

Query: 121 VWLGTYNTAEEAARAYDQAAIRIRGKKAKLNFTQPPPLPL-----------PSPPPQQLP 180
           VWLGTYNT EEAARAYDQAAIRIRGKKAKLNF  PPPLP            PSPP QQLP
Sbjct: 121 VWLGTYNTPEEAARAYDQAAIRIRGKKAKLNF--PPPLPSPPLLSVPLSLPPSPPQQQLP 180

Query: 181 TTSTPIDIQLKHQISSLESFLGLDPSLPVEPMADPWWVDDLLIYQQQNLQL 211
           TTSTPID++LKHQIS+LESFLGLDPS PVEP AD WWVDDLL  QQQNLQL
Sbjct: 181 TTSTPIDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLACQQQNLQL 225

[Close]
BLAST of ClCG05G006290 vs. TrEMBL
Match: A0A0B0MUY4_GOSAR (Ethylene-responsive transcription factor RAP2-3-like protein OS=Gossypium arboreum GN=F383_31781 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.6e-44
Identity = 122/259 (47.10%), Postives = 145/259 (55.98%), Query Frame = 1 

Query: 1   MCGGAIISDYVD---------NLLWPHLDTTFSDLLGLDLDLDLDLSTQNYPFNNTPSIV 60
           MCGGAIISD++            LW  LDT FSDLLGLD     D S     F+NT +  
Sbjct: 1   MCGGAIISDFIAVKRGRKLTAEDLWSELDT-FSDLLGLDYGNGKDSSFTQ--FDNTKA-- 60

Query: 61  VETPKQLPQVKSEKVEGSEAAGSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRV 120
               K L +V +E  + +        KT++ RK+ YRGIRQRPWGKWAAEIRDP KG+RV
Sbjct: 61  GSKAKNLEKVANETTQKTSRGREKEGKTQRTRKNIYRGIRQRPWGKWAAEIRDPHKGVRV 120

Query: 121 WLGTYNTAEEAARAYDQAAIRIRGKKAKLNFTQPPPLPLP-------------------- 180
           WLGTYNTAEEAARAYD+AA RIRG+KAKLNF Q P L  P                    
Sbjct: 121 WLGTYNTAEEAARAYDEAAKRIRGEKAKLNFPQTPHLTQPPAKKRCMMAPELTPPSSETK 180

Query: 181 SPPPQQL------------PTTSTPIDIQLKHQISSLESFLGLDP-------SLPVEP-M 211
           SPP  QL            P+ +   +++LK QISSLESFLGL+P       S   EP  
Sbjct: 181 SPPTPQLFMGFGYENGVYRPSEAMESEMELKEQISSLESFLGLEPDETTTELSGSAEPDS 240

[Close]
BLAST of ClCG05G006290 vs. TrEMBL
Match: A0A0D2UVB3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G193600 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.0e-43
Identity = 119/259 (45.95%), Postives = 145/259 (55.98%), Query Frame = 1 

Query: 1   MCGGAIISDYVD---------NLLWPHLDTTFSDLLGLDLDLDLDLSTQNYPFNNTPSIV 60
           MCGGAIISD++            LW  LDT FSDLLGLD     D  +Q   F+NT +  
Sbjct: 1   MCGGAIISDFIAVKRGRKLTAEDLWSELDT-FSDLLGLDYGNGKDPFSQ---FDNTKA-- 60

Query: 61  VETPKQLPQVKSEKVEGSEAAGSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRV 120
               K L +V +E  + +        KT++ RK+ YRGIRQRPWGKWAAEIRDP KG+RV
Sbjct: 61  GSKAKNLEKVTNESTQKTSRGREKEGKTQRTRKNIYRGIRQRPWGKWAAEIRDPHKGVRV 120

Query: 121 WLGTYNTAEEAARAYDQAAIRIRGKKAKLNFTQPPPLPLP-------------------- 180
           WLGTYNTAEEAARAYD+AA RIRG KAKLNF Q P L  P                    
Sbjct: 121 WLGTYNTAEEAARAYDEAAKRIRGDKAKLNFPQTPRLTQPPAKKRCMMAPELTPPSSETK 180

Query: 181 -SPPPQQL-----------PTTSTPIDIQLKHQISSLESFLGLDP---SLPVEPMADP-- 211
            SP PQ             P+ +   +++LK QISSLESFLGL+P   +  +   A+P  
Sbjct: 181 SSPTPQPFMGFGYENGVYRPSEAMESEMELKEQISSLESFLGLEPDEMTTELSGSAEPES 240

[Close]
BLAST of ClCG05G006290 vs. TrEMBL
Match: Q56E95_GOSHI (Putative ethylene responsive element binding protein 2 OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 5.1e-43
Identity = 122/260 (46.92%), Postives = 147/260 (56.54%), Query Frame = 1 

Query: 1   MCGGAIISDYVD---------NLLWPHLDTTFSDLLGLDLDLDLDLS-TQNYPFNNTPSI 60
           MCGGAIISD++            LW  LDT FSDLLGLD     + S TQ+   +NT + 
Sbjct: 1   MCGGAIISDFIAVKRGRKLTAEDLWSELDT-FSDLLGLDYGNGKESSFTQS---DNTKA- 60

Query: 61  VVETPKQLPQVKSEKVEGSEAAGSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGLR 120
                K L +V +E  + +        KT++ RK+ YRGIRQRPWGKWAAEIRDP KG+R
Sbjct: 61  -GSKAKNLEKVANETTQKTSRGREKEGKTQRTRKNIYRGIRQRPWGKWAAEIRDPHKGVR 120

Query: 121 VWLGTYNTAEEAARAYDQAAIRIRGKKAKLNFTQPPPLPLP------------------- 180
           VWLGTYNTAEEAARAYD+AA RIRG+KAKLNF Q P L  P                   
Sbjct: 121 VWLGTYNTAEEAARAYDEAAKRIRGEKAKLNFPQTPHLTQPPAKKRCMMAPELTPPSSET 180

Query: 181 -SPPPQQL------------PTTSTPIDIQLKHQISSLESFLGLDP-------SLPVEP- 211
            SPP  QL            P+ +   +++LK QISSLESFLGL+P       S   EP 
Sbjct: 181 KSPPTPQLFMGFGYENGVYRPSEAMESEMELKEQISSLESFLGLEPDETTTELSGSAEPD 240

[Close]
BLAST of ClCG05G006290 vs. TrEMBL
Match: Q5U8L6_GOSHI (AP2/EREBP transcription factor ERF-2 OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.3e-42
Identity = 117/259 (45.17%), Postives = 144/259 (55.60%), Query Frame = 1 

Query: 1   MCGGAIISDYVD---------NLLWPHLDTTFSDLLGLDLDLDLDLSTQNYPFNNTPSIV 60
           MCGGAIISD++            LW  LDT FSDLLGLD     D  TQ   F+NT +  
Sbjct: 1   MCGGAIISDFIAVKRGRKLTAEDLWSELDT-FSDLLGLDYGNGKDPFTQ---FDNTKA-- 60

Query: 61  VETPKQLPQVKSEKVEGSEAAGSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRV 120
               K L +V +E  + +        KT++ RK+ YRGIR+RPWGKWAAEIRDP KG+R+
Sbjct: 61  GSKAKNLEKVTNESTQKTSRGREKEGKTQRTRKNIYRGIRRRPWGKWAAEIRDPHKGVRI 120

Query: 121 WLGTYNTAEEAARAYDQAAIRIRGKKAKLNFTQPPPLPLP-------------------- 180
           WLGTYNTAEEAARAYD+AA RIRG KAKLNF Q P L  P                    
Sbjct: 121 WLGTYNTAEEAARAYDEAAKRIRGDKAKLNFPQTPRLTQPPAKKRCMMAPELTPPSSETK 180

Query: 181 SPPPQQ------------LPTTSTPIDIQLKHQISSLESFLGLDP---SLPVEPMADP-- 211
           SPP  Q             P+ +   +++LK QISSLESFLGL+P   +  +   A+P  
Sbjct: 181 SPPTPQPFMGFGYENGVYRPSEAMESEMELKEQISSLESFLGLEPDEMTTELSGSAEPES 240

[Close]
BLAST of ClCG05G006290 vs. TAIR10
Match: AT3G16770.1 (AT3G16770.1 ethylene-responsive element binding protein)

HSP 1 Score: 136.7 bits (343), Expect = 1.6e-32
Identity = 101/254 (39.76%), Postives = 124/254 (48.82%), Query Frame = 1 

Query: 1   MCGGAIISDYVDNLLWPHLDTTFSDLLGLDLDLDLDLSTQN--YPFNNTPSIVVETPKQL 60
           MCGGAIISDY   +           L   +L  +LD S  +  + F +T  +    P   
Sbjct: 1   MCGGAIISDYAPLVT----KAKGRKLTAEELWSELDASAADDFWGFYSTSKL---HPTNQ 60

Query: 61  PQVKSEKVEGSEAAGSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNT 120
             VK E V+  +A     ++    RK+ YRGIR+RPWGKWAAEIRDP+KG+RVWLGT+NT
Sbjct: 61  VNVKEEAVKKEQATEPGKRRK---RKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNT 120

Query: 121 AEEAARAYDQAAIRIRGKKAKLNFTQ---PPP---LPLPSPP-----------------P 180
           AEEAA AYD AA +IRG KAKLNF     PPP    P PS P                  
Sbjct: 121 AEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKVCVVSQSE 180

Query: 181 QQLPTTSTPI--------------------DIQLKHQISSLESFLGLDPSLPVEPM---- 202
            +L   S P+                    D  LK QISSLESFL LD +   +P     
Sbjct: 181 SELSQPSFPVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLESFLELDGNTAEQPSQLDE 240

[Close]
BLAST of ClCG05G006290 vs. TAIR10
Match: AT1G53910.1 (AT1G53910.1 related to AP2 12)

HSP 1 Score: 131.0 bits (328), Expect = 8.8e-31
Identity = 86/238 (36.13%), Postives = 113/238 (47.48%), Query Frame = 1 

Query: 1   MCGGAIISDYV---------DNLLWPHLDTT---------------------------FS 60
           MCGGAIISD++            +WP L                              F 
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFK 60

Query: 61  DLLGLDLDLDLDLS-----TQNYPFNNTPSIVVETPKQLPQVKSEKVEGSEAAGSAMKKT 120
           D   +D D D D+       + + F +TP   V    +   V  +KV G +  G A K  
Sbjct: 61  DDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAE-GSVFGKKVTGLD--GDAEKSA 120

Query: 121 KKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAARAYDQAAIRIRGKKAK 176
            + RK++YRGIRQRPWGKWAAEIRDP++G R+WLGT+ TAEEAARAYD AA RIRG KAK
Sbjct: 121 NRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAK 180

[Close]
BLAST of ClCG05G006290 vs. TAIR10
Match: AT3G14230.1 (AT3G14230.1 related to AP2 2)

HSP 1 Score: 126.3 bits (316), Expect = 2.2e-29
Identity = 82/204 (40.20%), Postives = 101/204 (49.51%), Query Frame = 1 

Query: 1   MCGGAIISDYV---------DNLLWPHLDTTF----------SDLLGLDLDLDLDLS--- 60
           MCGGAIISD++         +  +WP L              SD   LD D + D     
Sbjct: 1   MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFK 60

Query: 61  ---------TQNYPFNNTPSIVVETPKQLPQV----------KSEKVEGSEAAGSAMKKT 120
                      +   N  P +   T K +              +   +  E+A  A K +
Sbjct: 61  DDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSS 120

Query: 121 KKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAARAYDQAAIRIRGKKAK 164
           K+ RK++YRGIRQRPWGKWAAEIRDP+KG R WLGT++TAEEAARAYD AA RIRG KAK
Sbjct: 121 KRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAK 180

[Close]
BLAST of ClCG05G006290 vs. TAIR10
Match: AT2G47520.1 (AT2G47520.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 117.9 bits (294), Expect = 7.8e-27
Identity = 72/155 (46.45%), Postives = 87/155 (56.13%), Query Frame = 1 

Query: 55  PKQLPQVKSEKVEGSEAAGSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 114
           P QL  V S K +    + S  +  K+ RK+ YRGIRQRPWGKWAAEIRDP KG+RVWLG
Sbjct: 19  PSQLGSVSSRK-KRKPVSVSEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLG 78

Query: 115 TYNTAEEAARAYDQAAIRIRGKKAKLNF--TQPPPLPLPSPPPQQLPTTSTPIDIQLKHQ 174
           T+ TA+EAARAYD AAI+IRG+KAKLNF  TQ        P   Q    S      L   
Sbjct: 79  TFKTADEAARAYDVAAIKIRGRKAKLNFPNTQVEEEADTKPGGNQNELISENQVESLSED 138

Query: 175 ISSLESFLGLDPSLPVEPMADPWWVDDLLIYQQQN 208
           + +LE ++     +PV        + +L  YQ  N
Sbjct: 139 LMALEDYMRF-YQIPVADDQSATDIGNLWSYQDSN 171

[Close]
BLAST of ClCG05G006290 vs. TAIR10
Match: AT5G50080.1 (AT5G50080.1 ethylene response factor 110)

HSP 1 Score: 115.9 bits (289), Expect = 2.9e-26
Identity = 55/101 (54.46%), Postives = 67/101 (66.34%), Query Frame = 1 

Query: 55  PKQLPQVKSEKVEGSEAAGSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 114
           P    +V S      E+   A  +  + +K +YRG+RQRPWGKWAAEIRDP +  RVWLG
Sbjct: 45  PSSFARVDSSHNPIEESMSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLG 104

Query: 115 TYNTAEEAARAYDQAAIRIRGKKAKLNFTQPPPLPLPSPPP 156
           T++TAE AARAYD+AA+R RG KAKLNF +   + LP PPP
Sbjct: 105 TFDTAEAAARAYDEAALRFRGNKAKLNFPEDVRI-LPPPPP 144

[Close]
BLAST of ClCG05G006290 vs. NCBI nr
Match: gi|449432884|ref|XP_004134228.1| (PREDICTED: ethylene-responsive transcription factor RAP2-3-like [Cucumis sativus])

HSP 1 Score: 322.4 bits (825), Expect = 5.9e-85
Identity = 173/231 (74.89%), Postives = 181/231 (78.35%), Query Frame = 1 

Query: 1   MCGGAIISDYV-------DNLLWPHLDTTFSDLLGLDLDLDLDLSTQNYPFNNT--PSIV 60
           MCGGAIISDYV       DNLLWP LDTTFSDLLGLDL       TQNYPFNNT  P++V
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTFSDLLGLDLITQ----TQNYPFNNTTSPNVV 60

Query: 61  VET-PKQLPQVKSEKVEGSEAAGSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGLR 120
               PKQL QVK EKVEG+E     MKK +KVRKSKYRGIRQRPWGKWAAEIRDP+KGLR
Sbjct: 61  DNNIPKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLR 120

Query: 121 VWLGTYNTAEEAARAYDQAAIRIRGKKAKLNFTQPPPLPL-----------PSPPPQQLP 180
           VWLGTYNT EEAARAYDQAAIRIRGKKAKLNF  PPPLP            PSPP QQLP
Sbjct: 121 VWLGTYNTPEEAARAYDQAAIRIRGKKAKLNF--PPPLPSPPLLSVPLSLPPSPPQQQLP 180

Query: 181 TTSTPIDIQLKHQISSLESFLGLDPSLPVEPMADPWWVDDLLIYQQQNLQL 211
           TTSTPID++LKHQIS+LESFLGLDPS PVEP AD WWVDDLL  QQQNLQL
Sbjct: 181 TTSTPIDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLACQQQNLQL 225

[Close]
BLAST of ClCG05G006290 vs. NCBI nr
Match: gi|659076877|ref|XP_008438910.1| (PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X1 [Cucumis melo])

HSP 1 Score: 318.9 bits (816), Expect = 6.5e-84
Identity = 174/233 (74.68%), Postives = 182/233 (78.11%), Query Frame = 1 

Query: 1   MCGGAIISDYV-------DNLLWPHLDTT-FSDLLGLDLDLDLDLSTQNYPFNNTP---S 60
           MCGGAIISDYV       DNLLWP LDTT FSDLLGLDL       TQNY FNNT    +
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDLS-----GTQNYLFNNTTPSAN 60

Query: 61  IVVETPKQLPQVKSEKVEGSEAAGSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGL 120
           +V   PKQL QVK E+VEG+E A S MKK +KVRKSKYRGIRQRPWGKWAAEIRDPQKGL
Sbjct: 61  VVHNIPKQLSQVKKERVEGNEGATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGL 120

Query: 121 RVWLGTYNTAEEAARAYDQAAIRIRGKKAKLNFTQPP-----PLPLPSPP------PQQL 180
           RVWLGTYNTAEEAARAYDQAAIRIRGKKAKLNF  PP     PLPLP PP       QQL
Sbjct: 121 RVWLGTYNTAEEAARAYDQAAIRIRGKKAKLNFPHPPPPPSLPLPLPLPPSLPQQQQQQL 180

Query: 181 PTTS-TPIDIQLKHQISSLESFLGLDPSLPVEPMADPWWVDDLLIYQQQNLQL 211
           PTTS TP D++LKHQIS+LESFLGLDPS PVEP AD WWVDDLL YQQQNLQL
Sbjct: 181 PTTSATPFDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLTYQQQNLQL 228

[Close]
BLAST of ClCG05G006290 vs. NCBI nr
Match: gi|659076879|ref|XP_008438911.1| (PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X2 [Cucumis melo])

HSP 1 Score: 310.1 bits (793), Expect = 3.0e-81
Identity = 172/233 (73.82%), Postives = 180/233 (77.25%), Query Frame = 1 

Query: 1   MCGGAIISDYV-------DNLLWPHLDTT-FSDLLGLDLDLDLDLSTQNYPFNNTP---S 60
           MCGGAIISDYV       DNLLWP LDTT FSDLLGLDL       TQNY FNNT    +
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDLS-----GTQNYLFNNTTPSAN 60

Query: 61  IVVETPKQLPQVKSEKVEGSEAAGSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGL 120
           +V   PKQL Q   E+VEG+E A S MKK +KVRKSKYRGIRQRPWGKWAAEIRDPQKGL
Sbjct: 61  VVHNIPKQLSQ---ERVEGNEGATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGL 120

Query: 121 RVWLGTYNTAEEAARAYDQAAIRIRGKKAKLNFTQPP-----PLPLPSPP------PQQL 180
           RVWLGTYNTAEEAARAYDQAAIRIRGKKAKLNF  PP     PLPLP PP       QQL
Sbjct: 121 RVWLGTYNTAEEAARAYDQAAIRIRGKKAKLNFPHPPPPPSLPLPLPLPPSLPQQQQQQL 180

Query: 181 PTTS-TPIDIQLKHQISSLESFLGLDPSLPVEPMADPWWVDDLLIYQQQNLQL 211
           PTTS TP D++LKHQIS+LESFLGLDPS PVEP AD WWVDDLL YQQQNLQL
Sbjct: 181 PTTSATPFDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLTYQQQNLQL 225

[Close]
BLAST of ClCG05G006290 vs. NCBI nr
Match: gi|728824721|gb|KHG05913.1| (Ethylene-responsive transcription factor RAP2-3 -like protein [Gossypium arboreum])

HSP 1 Score: 186.0 bits (471), Expect = 6.6e-44
Identity = 122/259 (47.10%), Postives = 145/259 (55.98%), Query Frame = 1 

Query: 1   MCGGAIISDYVD---------NLLWPHLDTTFSDLLGLDLDLDLDLSTQNYPFNNTPSIV 60
           MCGGAIISD++            LW  LDT FSDLLGLD     D S     F+NT +  
Sbjct: 1   MCGGAIISDFIAVKRGRKLTAEDLWSELDT-FSDLLGLDYGNGKDSSFTQ--FDNTKA-- 60

Query: 61  VETPKQLPQVKSEKVEGSEAAGSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRV 120
               K L +V +E  + +        KT++ RK+ YRGIRQRPWGKWAAEIRDP KG+RV
Sbjct: 61  GSKAKNLEKVANETTQKTSRGREKEGKTQRTRKNIYRGIRQRPWGKWAAEIRDPHKGVRV 120

Query: 121 WLGTYNTAEEAARAYDQAAIRIRGKKAKLNFTQPPPLPLP-------------------- 180
           WLGTYNTAEEAARAYD+AA RIRG+KAKLNF Q P L  P                    
Sbjct: 121 WLGTYNTAEEAARAYDEAAKRIRGEKAKLNFPQTPHLTQPPAKKRCMMAPELTPPSSETK 180

Query: 181 SPPPQQL------------PTTSTPIDIQLKHQISSLESFLGLDP-------SLPVEP-M 211
           SPP  QL            P+ +   +++LK QISSLESFLGL+P       S   EP  
Sbjct: 181 SPPTPQLFMGFGYENGVYRPSEAMESEMELKEQISSLESFLGLEPDETTTELSGSAEPDS 240

[Close]
BLAST of ClCG05G006290 vs. NCBI nr
Match: gi|823246609|ref|XP_012455978.1| (PREDICTED: ethylene-responsive transcription factor RAP2-3 [Gossypium raimondii])

HSP 1 Score: 183.3 bits (464), Expect = 4.3e-43
Identity = 119/259 (45.95%), Postives = 145/259 (55.98%), Query Frame = 1 

Query: 1   MCGGAIISDYVD---------NLLWPHLDTTFSDLLGLDLDLDLDLSTQNYPFNNTPSIV 60
           MCGGAIISD++            LW  LDT FSDLLGLD     D  +Q   F+NT +  
Sbjct: 1   MCGGAIISDFIAVKRGRKLTAEDLWSELDT-FSDLLGLDYGNGKDPFSQ---FDNTKA-- 60

Query: 61  VETPKQLPQVKSEKVEGSEAAGSAMKKTKKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRV 120
               K L +V +E  + +        KT++ RK+ YRGIRQRPWGKWAAEIRDP KG+RV
Sbjct: 61  GSKAKNLEKVTNESTQKTSRGREKEGKTQRTRKNIYRGIRQRPWGKWAAEIRDPHKGVRV 120

Query: 121 WLGTYNTAEEAARAYDQAAIRIRGKKAKLNFTQPPPLPLP-------------------- 180
           WLGTYNTAEEAARAYD+AA RIRG KAKLNF Q P L  P                    
Sbjct: 121 WLGTYNTAEEAARAYDEAAKRIRGDKAKLNFPQTPRLTQPPAKKRCMMAPELTPPSSETK 180

Query: 181 -SPPPQQL-----------PTTSTPIDIQLKHQISSLESFLGLDP---SLPVEPMADP-- 211
            SP PQ             P+ +   +++LK QISSLESFLGL+P   +  +   A+P  
Sbjct: 181 SSPTPQPFMGFGYENGVYRPSEAMESEMELKEQISSLESFLGLEPDEMTTELSGSAEPES 240

The following BLAST results are available for this feature:
BLAST of ClCG05G006290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RAP23_ARATH2.9e-3139.76Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-... [more]
RA212_ARATH1.6e-2936.13Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2... [more]
RAP22_ARATH3.9e-2840.20Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-... [more]
ERF1_ORYSJ4.7e-2672.97Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=ER... [more]
ERF71_ARATH1.4e-2546.45Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF07... [more]
BLAST of ClCG05G006290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7Z6_CUCSA4.1e-8574.89Uncharacterized protein OS=Cucumis sativus GN=Csa_3G164580 PE=4 SV=1[more]
A0A0B0MUY4_GOSAR4.6e-4447.10Ethylene-responsive transcription factor RAP2-3-like protein OS=Gossypium arbore... [more]
A0A0D2UVB3_GOSRA3.0e-4345.95Uncharacterized protein OS=Gossypium raimondii GN=B456_011G193600 PE=4 SV=1[more]
Q56E95_GOSHI5.1e-4346.92Putative ethylene responsive element binding protein 2 OS=Gossypium hirsutum PE=... [more]
Q5U8L6_GOSHI4.3e-4245.17AP2/EREBP transcription factor ERF-2 OS=Gossypium hirsutum PE=2 SV=1[more]
BLAST of ClCG05G006290 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16770.11.6e-3239.76 ethylene-responsive element binding protein[more]
AT1G53910.18.8e-3136.13 related to AP2 12[more]
AT3G14230.12.2e-2940.20 related to AP2 2[more]
AT2G47520.17.8e-2746.45 Integrase-type DNA-binding superfamily protein[more]
AT5G50080.12.9e-2654.46 ethylene response factor 110[more]
BLAST of ClCG05G006290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432884|ref|XP_004134228.1|5.9e-8574.89PREDICTED: ethylene-responsive transcription factor RAP2-3-like [Cucumis sativus... [more]
gi|659076877|ref|XP_008438910.1|6.5e-8474.68PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X1 [Cucumis m... [more]
gi|659076879|ref|XP_008438911.1|3.0e-8173.82PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X2 [Cucumis m... [more]
gi|728824721|gb|KHG05913.1|6.6e-4447.10Ethylene-responsive transcription factor RAP2-3 -like protein [Gossypium arboreu... [more]
gi|823246609|ref|XP_012455978.1|4.3e-4345.95PREDICTED: ethylene-responsive transcription factor RAP2-3 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G006290.1ClCG05G006290.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 87..98
score: 1.4E-11coord: 109..125
score: 1.4
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 86..143
score: 9.6
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 85..135
score: 2.1
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 86..149
score: 4.1
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 86..143
score: 24
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 85..143
score: 5.75
NoneNo IPR availablePANTHERPTHR31190FAMILY NOT NAMEDcoord: 45..199
score: 5.2
NoneNo IPR availablePANTHERPTHR31190:SF18SUBFAMILY NOT NAMEDcoord: 45..199
score: 5.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG05G006290Csa3G164580Cucumber (Chinese Long) v2cuwcgB222
ClCG05G006290Csa6G318160Cucumber (Chinese Long) v2cuwcgB474
ClCG05G006290MELO3C006688Melon (DHL92) v3.5.1mewcgB427
ClCG05G006290MELO3C021306Melon (DHL92) v3.5.1mewcgB121
ClCG05G006290Cla009283Watermelon (97103) v1wcgwmB311
ClCG05G006290Cla021765Watermelon (97103) v1wcgwmB286
ClCG05G006290Cla97C05G087870Watermelon (97103) v2wcgwmbB229
ClCG05G006290Cla97C06G114420Watermelon (97103) v2wcgwmbB238
ClCG05G006290Bhi01G000749Wax gourdwcgwgoB426
ClCG05G006290Bhi12G001800Wax gourdwcgwgoB418
ClCG05G006290CSPI03G14710Wild cucumber (PI 183967)cpiwcgB226
ClCG05G006290CSPI06G17380Wild cucumber (PI 183967)cpiwcgB499
ClCG05G006290Cucsa.069280Cucumber (Gy14) v1cgywcgB068
ClCG05G006290Cucsa.252810Cucumber (Gy14) v1cgywcgB451
ClCG05G006290CmaCh14G016060Cucurbita maxima (Rimu)cmawcgB233
ClCG05G006290CmaCh08G012420Cucurbita maxima (Rimu)cmawcgB796
ClCG05G006290CmaCh06G015430Cucurbita maxima (Rimu)cmawcgB737
ClCG05G006290CmoCh14G016420Cucurbita moschata (Rifu)cmowcgB219
ClCG05G006290CmoCh08G012150Cucurbita moschata (Rifu)cmowcgB792
ClCG05G006290Lsi09G014540Bottle gourd (USVL1VR-Ls)lsiwcgB017
ClCG05G006290Lsi05G015640Bottle gourd (USVL1VR-Ls)lsiwcgB333
ClCG05G006290CsGy6G016860Cucumber (Gy14) v2cgybwcgB436
ClCG05G006290CsGy3G014830Cucumber (Gy14) v2cgybwcgB203
ClCG05G006290MELO3C021306.2Melon (DHL92) v3.6.1medwcgB115
ClCG05G006290MELO3C006688.2Melon (DHL92) v3.6.1medwcgB416
ClCG05G006290Carg18858Silver-seed gourdcarwcgB0680
ClCG05G006290Carg19647Silver-seed gourdcarwcgB0271
ClCG05G006290CsaV3_6G023790Cucumber (Chinese Long) v3cucwcgB494
ClCG05G006290CsaV3_3G014920Cucumber (Chinese Long) v3cucwcgB225
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
ClCG05G006290ClCG06G004930Watermelon (Charleston Gray)wcgwcgB160
The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G006290Cucurbita maxima (Rimu)cmawcgB001
ClCG05G006290Cucurbita maxima (Rimu)cmawcgB320
ClCG05G006290Cucurbita moschata (Rifu)cmowcgB316
ClCG05G006290Cucurbita moschata (Rifu)cmowcgB743
ClCG05G006290Wild cucumber (PI 183967)cpiwcgB069
ClCG05G006290Cucurbita pepo (Zucchini)cpewcgB139
ClCG05G006290Cucurbita pepo (Zucchini)cpewcgB291
ClCG05G006290Cucurbita pepo (Zucchini)cpewcgB559
ClCG05G006290Cucurbita pepo (Zucchini)cpewcgB787
ClCG05G006290Silver-seed gourdcarwcgB0072
ClCG05G006290Silver-seed gourdcarwcgB0929