Cucsa.252810 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.252810
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionEthylene-responsive transcription factor
Locationscaffold02229 : 1675504 .. 1677367 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTATTTGTCAGATTGTTGGTAACTTCCTTTTACGTTATAACCGTCATCTCCTCTTTTCTTCTATTATAAATCTCTCTTTCCTTTCACTTTCATTTTCATTCTTCTCTTCGCCACACTCCTCCTTTTCTCAATTTCTTATTCTTTTTGTTCTCTCTCCTCTTTCACTTCAACCACCCACCATGTGCGGCGGAGCTATCATCTCCGATTACGTCGAACCAAACCCCGTTGTCGTCGACAACCTCCTTTGGCCTGACCTCGACACCACCTTCTCCGACCTCCTCGGTCTTGACCTCATCACCCAGACCCAAAACTACCCCTTCAACAACACTACTTCTCCCAATGTTGTCGACAATAATATTCCCAAACAACTCTCTCAAGGTACACTACTCTGATTCTGAACTCCCCTCCCCTCCCCCTCCTTAATTACTTTCTAAAATCCATTTTTCATTTAATTGATTATTCAACCTCTAACTTGTAGTGAAACTATTGTAGAAGAACTCAAAAAGTTGAACTTATTAATTTTAAGGATGCATAAACTTTGTAGGAATTAACTTAATTAACAAATAAAATATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTATATCTTCAATACTGTTTAGCTAAATTTTGTTATAATGAAAATTTATAGAAGGTCTCGCAGGCATAAATCAATAACAATTGGAAAAGAAATGACTTTAGGAGTTTGAGCCATCTTTTACTATGTTAAATCAATGACAAGCCCAAAACTATATATCATCTGGTTGACAAATCAATAGTTTAATGAAAAAAGTGACTCTTTCACATCAATTGAGTTTTAAAAAATGAGAAAAAATTTAAGATTCTATTTTGTTTTTTTTCTAGAATTAAGCTTATAATTCTCTCAATTTTTTACAACAAGATTTGTATATTAAAATGAAAGCGTTATAACCAAATTTCAGAAAACAAAAATAAGCTTTTGAGAAACTGAGGTGAATGGATTGTTTAATTGCAAGCTTAAAGAAAAAGTAAACTTAGTAGTTCGTGTGTTTTGTTTTGTGATGAGAAATGATAGTAAACTAGTAGTAATTGGGTATTGTTAATGTTAAATGTTTTTAGTGAAAAAAGAGAAAGTAGAAGGGAATGAAGTAGGAAGAGGTGAAATGAAGAAGCCTCAAAAGGTTAGAAAAAGCAAATACAGAGGGATCAGGCAGCGTCCATGGGGAAAATGGGCCGCCGAGATTCGAGACCCACGAAAGGGCCTACGTGTTTGGCTTGGCACCTACAACACTCCTGAAGAAGCTGCTCGAGCCTATGATCAAGCCGCCATAAGAATCAGAGGTAAAAAGGCCAAACTCAACTTCCCGCCCCCACTCCCATCACCACCATTGTTATCAGTACCGTTATCTCTACCACCCTCACCGCCACAACAACAGCTCCCGACCACCTCCACCCCCATTGATGTCGAACTCAAACACCAAATCTCAACCTTGGAATCATTCCTCGGTCTCGACCCCTCGCCACCAGTCGAACCCACAGCAGACCTTTGGTGGGTTGATGACCTTCTCGCATGTCAACAACAAAACCTCCAACTCTAATTTCAAATACCCAAAATAAAACATTAATACTTACCTCATCATCTTTACAAGTAAGTAAGAATCTTTTATTAACACCGTTAAAAATTTGATAAGTTGAAATTTGAACAGGTGCAATCAGTTTGAAGATTTTTACTTATAATCATTTAGTAGGAGGTAAGTATATTGTTTAGTCTTTTTTTAAATCCCAACTTTTGTTAATATATAAGGAAGAGATTTAGTTCTTCCTTTGAAGTTGGGTTTTGGGTCTATATTTTGGTTTAATTATAATATAGTAAAGTGT

mRNA sequence

ATGAGTATTTGTCAGATTGTTGGTAACTTCCTTTTACGTTATAACCGTCAtctcctcttttcttctattataaatctctctttcctttcactttcattttcattcttctcttcgccacactcctccttttctcaatttcttattctttttgttctctctcctctttcacttcAACCACCCACCATGTGCGGCGGAGCTATCATCTCCGATTACGTCGAACCAAACCCCGTTGTCGTCGACAACCTCCTTTGGCCTGACCTCGACACCACCTTCTCCGACCTCCTCGGTCTTGACCTCATCACCCAGACCCAAAACTACCCCTTCAACAACACTACTTCTCCCAATGTTGTCGACAATAATATTCCCAAACAACTCTCTCAAGTGAAAAAAGAGAAAGTAGAAGGGAATGAAGTAGGAAGAGGTGAAATGAAGAAGCCTCAAAAGGTTAGAAAAAGCAAATACAGAGGGATCAGGCAGCGTCCATGGGGAAAATGGGCCGCCGAGATTCGAGACCCACGAAAGGGCCTACGTGTTTGGCTTGGCACCTACAACACTCCTGAAGAAGCTGCTCGAGCCTATGATCAAGCCGCCATAAGAATCAGAGGTAAAAAGGCCAAACTCAACTTCccgcccccactcccatcaccaccattgttatcagtaccgttatctctaccaccctcaccgccacaacaacagctcccgaccacctccacccccaTTGATGTCGAACTCAAACACCAAATCTCAACCTTGGAATCATTCCTCGGTCTCGACCCCTCGCCACCAGTCGAACCCACAGCAGACCTTTGGTGGGTTGATGACCTTCTCGCATGTCAACAACAAAACCTCCAACTCTAATTTCAAATACCCAAAATAAAACATTAATACTTACCTCATCATCTTTACAAGTAAGTAAGAATCTTTTATTAACACCGTTAAAAATTTGATAAGTTGAAATTTGAACAGGTGCAATCAGTTTGAAGATTTTTACTTATAATCATTTAGTAGGAGGTAAGTATATTGTTTAGTCTTTTTTTAAATCCCAACTTTTGTTAATATATAAGGAAGAGATTTAGTTCTTCCTTTGAAGTTGGGTTTTGGGTCTATATTTTGGTTTAATTATAATATAGTAAAGTGT

Coding sequence (CDS)

ATGAGTATTTGTCAGATTGTTGGTAACTTCCTTTTACGTTATAACCGTCATCTCCTCTTTTCTTCTATTATAAATCTCTCTTTCCTTTCACTTTCATTTTCATTCTTCTCTTCGCCACACTCCTCCTTTTCTCAATTTCTTATTCTTTTTGTTCTCTCTCCTCTTTCACTTCAACCACCCACCATGTGCGGCGGAGCTATCATCTCCGATTACGTCGAACCAAACCCCGTTGTCGTCGACAACCTCCTTTGGCCTGACCTCGACACCACCTTCTCCGACCTCCTCGGTCTTGACCTCATCACCCAGACCCAAAACTACCCCTTCAACAACACTACTTCTCCCAATGTTGTCGACAATAATATTCCCAAACAACTCTCTCAAGTGAAAAAAGAGAAAGTAGAAGGGAATGAAGTAGGAAGAGGTGAAATGAAGAAGCCTCAAAAGGTTAGAAAAAGCAAATACAGAGGGATCAGGCAGCGTCCATGGGGAAAATGGGCCGCCGAGATTCGAGACCCACGAAAGGGCCTACGTGTTTGGCTTGGCACCTACAACACTCCTGAAGAAGCTGCTCGAGCCTATGATCAAGCCGCCATAAGAATCAGAGGTAAAAAGGCCAAACTCAACTTCCCGCCCCCACTCCCATCACCACCATTGTTATCAGTACCGTTATCTCTACCACCCTCACCGCCACAACAACAGCTCCCGACCACCTCCACCCCCATTGATGTCGAACTCAAACACCAAATCTCAACCTTGGAATCATTCCTCGGTCTCGACCCCTCGCCACCAGTCGAACCCACAGCAGACCTTTGGTGGGTTGATGACCTTCTCGCATGTCAACAACAAAACCTCCAACTCTAA

Protein sequence

MSICQIVGNFLLRYNRHLLFSSIINLSFLSLSFSFFSSPHSSFSQFLILFVLSPLSLQPPTMCGGAIISDYVEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDNNIPKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLGTYNTPEEAARAYDQAAIRIRGKKAKLNFPPPLPSPPLLSVPLSLPPSPPQQQLPTTSTPIDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLACQQQNLQL*
Homology
[Close]
BLAST of Cucsa.252810 vs. Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2)

HSP 1 Score: 145.6 bits (366), Expect = 8.4e-34
Identity = 107/267 (40.07%), Postives = 138/267 (51.69%), Query Frame = 1 

Query: 62  MCGGAIISDYVEPNPVVVD--------NLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTS 121
           MCGGAIISDY    P+V            LW +LD + +D            + F +T+ 
Sbjct: 1   MCGGAIISDYA---PLVTKAKGRKLTAEELWSELDASAAD----------DFWGFYSTSK 60

Query: 122 PNVVDNNIPKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPR 181
            +   N +  +   VKKE  +  E G+      ++ RK+ YRGIR+RPWGKWAAEIRDPR
Sbjct: 61  LHPT-NQVNVKEEAVKKE--QATEPGK------RRKRKNVYRGIRKRPWGKWAAEIRDPR 120

Query: 182 KGLRVWLGTYNTPEEAARAYDQAAIRIRGKKAKLNFP-----PPLPSPPLLSVPLSL--P 241
           KG+RVWLGT+NT EEAA AYD AA +IRG KAKLNFP     PP    P  S P S   P
Sbjct: 121 KGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQP 180

Query: 242 P-------SPPQQQLPTTSTPI--------------------DVELKHQISTLESFLGLD 279
           P       S  + +L   S P+                    D +LK QIS+LESFL LD
Sbjct: 181 PAKKVCVVSQSESELSQPSFPVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLESFLELD 240

[Close]
BLAST of Cucsa.252810 vs. Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=1 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 1.8e-28
Identity = 81/187 (43.32%), Postives = 98/187 (52.41%), Query Frame = 1 

Query: 62  MCGGAIISDYVEP--NPVVVDNLLWPDL---------------------DTTFSDLLGL- 121
           MCGGAIISD++ P  +  V +  +WPDL                     D   +D  G  
Sbjct: 1   MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFK 60

Query: 122 -----------DLITQTQNYPFNNTTSPNV---VDNNIPKQLSQVKKEKVEGNEVGRGEM 181
                      D+    + + F  TT P     V   I    S   K+ VE  E      
Sbjct: 61  DDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAE--- 120

Query: 182 KKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLGTYNTPEEAARAYDQAAIRIRGK 211
           K  ++ RK++YRGIRQRPWGKWAAEIRDPRKG R WLGT++T EEAARAYD AA RIRG 
Sbjct: 121 KSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGT 180

[Close]
BLAST of Cucsa.252810 vs. Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.6e-27
Identity = 80/187 (42.78%), Postives = 98/187 (52.41%), Query Frame = 1 

Query: 62  MCGGAIISDYVEP--NPVVVDNLLWPDL--------------------DTTF-SDLLGL- 121
           MCGGAIISD++ P  +  V    +WPDL                    D  F +D  G  
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFK 60

Query: 122 --------------DLITQTQNYPFNNTTSPNVVDNNIPKQLSQVKKEKVEGNEVGRGEM 181
                         D+    + + F +T  P V           V  +KV G + G  E 
Sbjct: 61  DDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVS----AAAEGSVFGKKVTGLD-GDAE- 120

Query: 182 KKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLGTYNTPEEAARAYDQAAIRIRGK 211
           K   + RK++YRGIRQRPWGKWAAEIRDPR+G R+WLGT+ T EEAARAYD AA RIRG 
Sbjct: 121 KSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGS 180

[Close]
BLAST of Cucsa.252810 vs. Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.2e-25
Identity = 57/89 (64.04%), Postives = 67/89 (75.28%), Query Frame = 1 

Query: 122 PKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLG 181
           P QL  V   K +   V   E +  ++ RK+ YRGIRQRPWGKWAAEIRDP KG+RVWLG
Sbjct: 19  PSQLGSVSSRK-KRKPVSVSEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLG 78

Query: 182 TYNTPEEAARAYDQAAIRIRGKKAKLNFP 211
           T+ T +EAARAYD AAI+IRG+KAKLNFP
Sbjct: 79  TFKTADEAARAYDVAAIKIRGRKAKLNFP 106

[Close]
BLAST of Cucsa.252810 vs. Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.7e-24
Identity = 51/67 (76.12%), Postives = 60/67 (89.55%), Query Frame = 1 

Query: 144 KKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLGTYNTPEEAARAYDQAAIRIRGK 203
           K  ++ RK+++RGIRQRPWGKWAAEIRDPRKG+RVWLGT+N+ EEAARAYD  A RIRGK
Sbjct: 110 KSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGK 169

Query: 204 KAKLNFP 211
           KAK+NFP
Sbjct: 170 KAKVNFP 176

[Close]
BLAST of Cucsa.252810 vs. TrEMBL
Match: A0A0A0L7Z6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G164580 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 8.2e-129
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1 

Query: 62  MCGGAIISDYVEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDNNI 121
           MCGGAIISDYVEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDNNI
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDNNI 60

Query: 122 PKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLG 181
           PKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLG
Sbjct: 61  PKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLG 120

Query: 182 TYNTPEEAARAYDQAAIRIRGKKAKLNFPPPLPSPPLLSVPLSLPPSPPQQQLPTTSTPI 241
           TYNTPEEAARAYDQAAIRIRGKKAKLNFPPPLPSPPLLSVPLSLPPSPPQQQLPTTSTPI
Sbjct: 121 TYNTPEEAARAYDQAAIRIRGKKAKLNFPPPLPSPPLLSVPLSLPPSPPQQQLPTTSTPI 180

Query: 242 DVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLACQQQNLQL 287
           DVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLACQQQNLQL
Sbjct: 181 DVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLACQQQNLQL 225

[Close]
BLAST of Cucsa.252810 vs. TrEMBL
Match: Q56E95_GOSHI (Putative ethylene responsive element binding protein 2 OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.1e-48
Identity = 127/258 (49.22%), Postives = 153/258 (59.30%), Query Frame = 1 

Query: 62  MCGGAIISDY--VEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDN 121
           MCGGAIISD+  V+    +    LW +LDT FSDLLGLD     ++   + T S N    
Sbjct: 1   MCGGAIISDFIAVKRGRKLTAEDLWSELDT-FSDLLGLDYGNGKES---SFTQSDNTKAG 60

Query: 122 NIPKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVW 181
           +  K L +V  E  +    GR +  K Q+ RK+ YRGIRQRPWGKWAAEIRDP KG+RVW
Sbjct: 61  SKAKNLEKVANETTQKTSRGREKEGKTQRTRKNIYRGIRQRPWGKWAAEIRDPHKGVRVW 120

Query: 182 LGTYNTPEEAARAYDQAAIRIRGKKAKLNFP--PPLPSPPL---------LSVPLSLPPS 241
           LGTYNT EEAARAYD+AA RIRG+KAKLNFP  P L  PP          L+ P S   S
Sbjct: 121 LGTYNTAEEAARAYDEAAKRIRGEKAKLNFPQTPHLTQPPAKKRCMMAPELTPPSSETKS 180

Query: 242 PPQQQL------------PTTSTPIDVELKHQISTLESFLGLDP-------SPPVEP-TA 287
           PP  QL            P+ +   ++ELK QIS+LESFLGL+P       S   EP + 
Sbjct: 181 PPTPQLFMGFGYENGVYRPSEAMESEMELKEQISSLESFLGLEPDETTTELSGSAEPDSV 240

[Close]
BLAST of Cucsa.252810 vs. TrEMBL
Match: A0A0B0MUY4_GOSAR (Ethylene-responsive transcription factor RAP2-3-like protein OS=Gossypium arboreum GN=F383_31781 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 6.0e-47
Identity = 126/258 (48.84%), Postives = 151/258 (58.53%), Query Frame = 1 

Query: 62  MCGGAIISDY--VEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDN 121
           MCGGAIISD+  V+    +    LW +LDT FSDLLGLD      +   + T   N    
Sbjct: 1   MCGGAIISDFIAVKRGRKLTAEDLWSELDT-FSDLLGLDYGNGKDS---SFTQFDNTKAG 60

Query: 122 NIPKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVW 181
           +  K L +V  E  +    GR +  K Q+ RK+ YRGIRQRPWGKWAAEIRDP KG+RVW
Sbjct: 61  SKAKNLEKVANETTQKTSRGREKEGKTQRTRKNIYRGIRQRPWGKWAAEIRDPHKGVRVW 120

Query: 182 LGTYNTPEEAARAYDQAAIRIRGKKAKLNFP--PPLPSPPL---------LSVPLSLPPS 241
           LGTYNT EEAARAYD+AA RIRG+KAKLNFP  P L  PP          L+ P S   S
Sbjct: 121 LGTYNTAEEAARAYDEAAKRIRGEKAKLNFPQTPHLTQPPAKKRCMMAPELTPPSSETKS 180

Query: 242 PPQQQL------------PTTSTPIDVELKHQISTLESFLGLDP-------SPPVEP-TA 287
           PP  QL            P+ +   ++ELK QIS+LESFLGL+P       S   EP + 
Sbjct: 181 PPTPQLFMGFGYENGVYRPSEAMESEMELKEQISSLESFLGLEPDETTTELSGSAEPDSV 240

[Close]
BLAST of Cucsa.252810 vs. TrEMBL
Match: A0A0D2UVB3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G193600 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.3e-45
Identity = 123/259 (47.49%), Postives = 149/259 (57.53%), Query Frame = 1 

Query: 62  MCGGAIISDY--VEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYP-FNNTTSPNVVD 121
           MCGGAIISD+  V+    +    LW +LDT FSDLLGLD       +  F+NT + +   
Sbjct: 1   MCGGAIISDFIAVKRGRKLTAEDLWSELDT-FSDLLGLDYGNGKDPFSQFDNTKAGSKAK 60

Query: 122 NNIPKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRV 181
           N     L +V  E  +    GR +  K Q+ RK+ YRGIRQRPWGKWAAEIRDP KG+RV
Sbjct: 61  N-----LEKVTNESTQKTSRGREKEGKTQRTRKNIYRGIRQRPWGKWAAEIRDPHKGVRV 120

Query: 182 WLGTYNTPEEAARAYDQAAIRIRGKKAKLNFP--PPLPSPP----LLSVPLSLPPSPPQQ 241
           WLGTYNT EEAARAYD+AA RIRG KAKLNFP  P L  PP     +  P   PPS   +
Sbjct: 121 WLGTYNTAEEAARAYDEAAKRIRGDKAKLNFPQTPRLTQPPAKKRCMMAPELTPPSSETK 180

Query: 242 QLPT-----------------TSTPIDVELKHQISTLESFLGLDP-------SPPVEP-T 287
             PT                  +   ++ELK QIS+LESFLGL+P       S   EP +
Sbjct: 181 SSPTPQPFMGFGYENGVYRPSEAMESEMELKEQISSLESFLGLEPDEMTTELSGSAEPES 240

[Close]
BLAST of Cucsa.252810 vs. TrEMBL
Match: Q5U8L6_GOSHI (AP2/EREBP transcription factor ERF-2 OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.2e-44
Identity = 122/259 (47.10%), Postives = 150/259 (57.92%), Query Frame = 1 

Query: 62  MCGGAIISDY--VEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYP-FNNTTSPNVVD 121
           MCGGAIISD+  V+    +    LW +LDT FSDLLGLD       +  F+NT + +   
Sbjct: 1   MCGGAIISDFIAVKRGRKLTAEDLWSELDT-FSDLLGLDYGNGKDPFTQFDNTKAGSKAK 60

Query: 122 NNIPKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRV 181
           N     L +V  E  +    GR +  K Q+ RK+ YRGIR+RPWGKWAAEIRDP KG+R+
Sbjct: 61  N-----LEKVTNESTQKTSRGREKEGKTQRTRKNIYRGIRRRPWGKWAAEIRDPHKGVRI 120

Query: 182 WLGTYNTPEEAARAYDQAAIRIRGKKAKLNFP--PPLPSPPL---------LSVPLSLPP 241
           WLGTYNT EEAARAYD+AA RIRG KAKLNFP  P L  PP          L+ P S   
Sbjct: 121 WLGTYNTAEEAARAYDEAAKRIRGDKAKLNFPQTPRLTQPPAKKRCMMAPELTPPSSETK 180

Query: 242 SPPQQQ------------LPTTSTPIDVELKHQISTLESFLGLDP-------SPPVEP-T 287
           SPP  Q             P+ +   ++ELK QIS+LESFLGL+P       S   EP +
Sbjct: 181 SPPTPQPFMGFGYENGVYRPSEAMESEMELKEQISSLESFLGLEPDEMTTELSGSAEPES 240

[Close]
BLAST of Cucsa.252810 vs. TAIR10
Match: AT3G16770.1 (AT3G16770.1 ethylene-responsive element binding protein)

HSP 1 Score: 145.6 bits (366), Expect = 4.7e-35
Identity = 107/267 (40.07%), Postives = 138/267 (51.69%), Query Frame = 1 

Query: 62  MCGGAIISDYVEPNPVVVD--------NLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTS 121
           MCGGAIISDY    P+V            LW +LD + +D            + F +T+ 
Sbjct: 1   MCGGAIISDYA---PLVTKAKGRKLTAEELWSELDASAAD----------DFWGFYSTSK 60

Query: 122 PNVVDNNIPKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPR 181
            +   N +  +   VKKE  +  E G+      ++ RK+ YRGIR+RPWGKWAAEIRDPR
Sbjct: 61  LHPT-NQVNVKEEAVKKE--QATEPGK------RRKRKNVYRGIRKRPWGKWAAEIRDPR 120

Query: 182 KGLRVWLGTYNTPEEAARAYDQAAIRIRGKKAKLNFP-----PPLPSPPLLSVPLSL--P 241
           KG+RVWLGT+NT EEAA AYD AA +IRG KAKLNFP     PP    P  S P S   P
Sbjct: 121 KGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQP 180

Query: 242 P-------SPPQQQLPTTSTPI--------------------DVELKHQISTLESFLGLD 279
           P       S  + +L   S P+                    D +LK QIS+LESFL LD
Sbjct: 181 PAKKVCVVSQSESELSQPSFPVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLESFLELD 240

[Close]
BLAST of Cucsa.252810 vs. TAIR10
Match: AT3G14230.1 (AT3G14230.1 related to AP2 2)

HSP 1 Score: 127.9 bits (320), Expect = 1.0e-29
Identity = 81/187 (43.32%), Postives = 98/187 (52.41%), Query Frame = 1 

Query: 62  MCGGAIISDYVEP--NPVVVDNLLWPDL---------------------DTTFSDLLGL- 121
           MCGGAIISD++ P  +  V +  +WPDL                     D   +D  G  
Sbjct: 1   MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFK 60

Query: 122 -----------DLITQTQNYPFNNTTSPNV---VDNNIPKQLSQVKKEKVEGNEVGRGEM 181
                      D+    + + F  TT P     V   I    S   K+ VE  E      
Sbjct: 61  DDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAE--- 120

Query: 182 KKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLGTYNTPEEAARAYDQAAIRIRGK 211
           K  ++ RK++YRGIRQRPWGKWAAEIRDPRKG R WLGT++T EEAARAYD AA RIRG 
Sbjct: 121 KSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGT 180

[Close]
BLAST of Cucsa.252810 vs. TAIR10
Match: AT1G53910.1 (AT1G53910.1 related to AP2 12)

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-28
Identity = 80/187 (42.78%), Postives = 98/187 (52.41%), Query Frame = 1 

Query: 62  MCGGAIISDYVEP--NPVVVDNLLWPDL--------------------DTTF-SDLLGL- 121
           MCGGAIISD++ P  +  V    +WPDL                    D  F +D  G  
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFK 60

Query: 122 --------------DLITQTQNYPFNNTTSPNVVDNNIPKQLSQVKKEKVEGNEVGRGEM 181
                         D+    + + F +T  P V           V  +KV G + G  E 
Sbjct: 61  DDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVS----AAAEGSVFGKKVTGLD-GDAE- 120

Query: 182 KKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLGTYNTPEEAARAYDQAAIRIRGK 211
           K   + RK++YRGIRQRPWGKWAAEIRDPR+G R+WLGT+ T EEAARAYD AA RIRG 
Sbjct: 121 KSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGS 180

[Close]
BLAST of Cucsa.252810 vs. TAIR10
Match: AT2G47520.1 (AT2G47520.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-26
Identity = 57/89 (64.04%), Postives = 67/89 (75.28%), Query Frame = 1 

Query: 122 PKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLG 181
           P QL  V   K +   V   E +  ++ RK+ YRGIRQRPWGKWAAEIRDP KG+RVWLG
Sbjct: 19  PSQLGSVSSRK-KRKPVSVSEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLG 78

Query: 182 TYNTPEEAARAYDQAAIRIRGKKAKLNFP 211
           T+ T +EAARAYD AAI+IRG+KAKLNFP
Sbjct: 79  TFKTADEAARAYDVAAIKIRGRKAKLNFP 106

[Close]
BLAST of Cucsa.252810 vs. TAIR10
Match: AT1G72360.2 (AT1G72360.2 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 114.8 bits (286), Expect = 9.0e-26
Identity = 66/155 (42.58%), Postives = 85/155 (54.84%), Query Frame = 1 

Query: 62  MCGGAIISDYVEPNPVVVDN--LLWPD---LDTTFSDLLG-LDLITQTQNYPFNNTTSPN 121
           MCGGA+ISDY+ P  +   +    W      D +  D  G  D +   + + F++T   +
Sbjct: 1   MCGGAVISDYIAPEKIARSSGKSSWRSNGVFDCSIYDFDGNFDELESDEPFVFSSTHKHH 60

Query: 122 VVDNNIPKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKG 181
                                    G     +K + S+Y+GIR+RPWG+WAAEIRDP KG
Sbjct: 61  A-----------------------SGSASDGKKKQSSRYKGIRRRPWGRWAAEIRDPIKG 120

Query: 182 LRVWLGTYNTPEEAARAYDQAAIRIRGKKAKLNFP 211
           +RVWLGT+NT EEAARAYD  A RIRG KAKLNFP
Sbjct: 121 VRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFP 132

[Close]
BLAST of Cucsa.252810 vs. NCBI nr
Match: gi|449432884|ref|XP_004134228.1| (PREDICTED: ethylene-responsive transcription factor RAP2-3-like [Cucumis sativus])

HSP 1 Score: 468.0 bits (1203), Expect = 1.2e-128
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1 

Query: 62  MCGGAIISDYVEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDNNI 121
           MCGGAIISDYVEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDNNI
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDNNI 60

Query: 122 PKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLG 181
           PKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLG
Sbjct: 61  PKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLG 120

Query: 182 TYNTPEEAARAYDQAAIRIRGKKAKLNFPPPLPSPPLLSVPLSLPPSPPQQQLPTTSTPI 241
           TYNTPEEAARAYDQAAIRIRGKKAKLNFPPPLPSPPLLSVPLSLPPSPPQQQLPTTSTPI
Sbjct: 121 TYNTPEEAARAYDQAAIRIRGKKAKLNFPPPLPSPPLLSVPLSLPPSPPQQQLPTTSTPI 180

Query: 242 DVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLACQQQNLQL 287
           DVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLACQQQNLQL
Sbjct: 181 DVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLACQQQNLQL 225

[Close]
BLAST of Cucsa.252810 vs. NCBI nr
Match: gi|659076877|ref|XP_008438910.1| (PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X1 [Cucumis melo])

HSP 1 Score: 377.5 bits (968), Expect = 2.1e-101
Identity = 197/230 (85.65%), Postives = 202/230 (87.83%), Query Frame = 1 

Query: 62  MCGGAIISDYVEPNPVVVDNLLWPDLDTT-FSDLLGLDLITQTQNYPFNNTTSPNVVDNN 121
           MCGGAIISDYVEPNPVVVDNLLWPDLDTT FSDLLGLDL + TQNY FNNTT    V +N
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDL-SGTQNYLFNNTTPSANVVHN 60

Query: 122 IPKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWL 181
           IPKQLSQVKKE+VEGNE    EMKKPQKVRKSKYRGIRQRPWGKWAAEIRDP+KGLRVWL
Sbjct: 61  IPKQLSQVKKERVEGNEGATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWL 120

Query: 182 GTYNTPEEAARAYDQAAIRIRGKKAKLNFPPPLPSPPLLSVPLSLPPSPP---QQQLPTT 241
           GTYNT EEAARAYDQAAIRIRGKKAKLNFP P P PP L +PL LPPS P   QQQLPTT
Sbjct: 121 GTYNTAEEAARAYDQAAIRIRGKKAKLNFPHP-PPPPSLPLPLPLPPSLPQQQQQQLPTT 180

Query: 242 S-TPIDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLACQQQNLQL 287
           S TP DVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLL  QQQNLQL
Sbjct: 181 SATPFDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLTYQQQNLQL 228

[Close]
BLAST of Cucsa.252810 vs. NCBI nr
Match: gi|659076879|ref|XP_008438911.1| (PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X2 [Cucumis melo])

HSP 1 Score: 366.7 bits (940), Expect = 3.7e-98
Identity = 194/230 (84.35%), Postives = 199/230 (86.52%), Query Frame = 1 

Query: 62  MCGGAIISDYVEPNPVVVDNLLWPDLDTT-FSDLLGLDLITQTQNYPFNNTTSPNVVDNN 121
           MCGGAIISDYVEPNPVVVDNLLWPDLDTT FSDLLGLDL + TQNY FNNTT    V +N
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDL-SGTQNYLFNNTTPSANVVHN 60

Query: 122 IPKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWL 181
           IPKQLSQ   E+VEGNE    EMKKPQKVRKSKYRGIRQRPWGKWAAEIRDP+KGLRVWL
Sbjct: 61  IPKQLSQ---ERVEGNEGATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWL 120

Query: 182 GTYNTPEEAARAYDQAAIRIRGKKAKLNFPPPLPSPPLLSVPLSLPPSPP---QQQLPTT 241
           GTYNT EEAARAYDQAAIRIRGKKAKLNFP P P PP L +PL LPPS P   QQQLPTT
Sbjct: 121 GTYNTAEEAARAYDQAAIRIRGKKAKLNFPHP-PPPPSLPLPLPLPPSLPQQQQQQLPTT 180

Query: 242 S-TPIDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLACQQQNLQL 287
           S TP DVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLL  QQQNLQL
Sbjct: 181 SATPFDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLTYQQQNLQL 225

[Close]
BLAST of Cucsa.252810 vs. NCBI nr
Match: gi|62131147|gb|AAX68525.1| (putative ethylene responsive element binding protein 2 [Gossypium hirsutum])

HSP 1 Score: 199.1 bits (505), Expect = 1.0e-47
Identity = 127/258 (49.22%), Postives = 153/258 (59.30%), Query Frame = 1 

Query: 62  MCGGAIISDY--VEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDN 121
           MCGGAIISD+  V+    +    LW +LDT FSDLLGLD     ++   + T S N    
Sbjct: 1   MCGGAIISDFIAVKRGRKLTAEDLWSELDT-FSDLLGLDYGNGKES---SFTQSDNTKAG 60

Query: 122 NIPKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVW 181
           +  K L +V  E  +    GR +  K Q+ RK+ YRGIRQRPWGKWAAEIRDP KG+RVW
Sbjct: 61  SKAKNLEKVANETTQKTSRGREKEGKTQRTRKNIYRGIRQRPWGKWAAEIRDPHKGVRVW 120

Query: 182 LGTYNTPEEAARAYDQAAIRIRGKKAKLNFP--PPLPSPPL---------LSVPLSLPPS 241
           LGTYNT EEAARAYD+AA RIRG+KAKLNFP  P L  PP          L+ P S   S
Sbjct: 121 LGTYNTAEEAARAYDEAAKRIRGEKAKLNFPQTPHLTQPPAKKRCMMAPELTPPSSETKS 180

Query: 242 PPQQQL------------PTTSTPIDVELKHQISTLESFLGLDP-------SPPVEP-TA 287
           PP  QL            P+ +   ++ELK QIS+LESFLGL+P       S   EP + 
Sbjct: 181 PPTPQLFMGFGYENGVYRPSEAMESEMELKEQISSLESFLGLEPDETTTELSGSAEPDSV 240

[Close]
BLAST of Cucsa.252810 vs. NCBI nr
Match: gi|728824721|gb|KHG05913.1| (Ethylene-responsive transcription factor RAP2-3 -like protein [Gossypium arboreum])

HSP 1 Score: 196.1 bits (497), Expect = 8.7e-47
Identity = 126/258 (48.84%), Postives = 151/258 (58.53%), Query Frame = 1 

Query: 62  MCGGAIISDY--VEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDN 121
           MCGGAIISD+  V+    +    LW +LDT FSDLLGLD      +   + T   N    
Sbjct: 1   MCGGAIISDFIAVKRGRKLTAEDLWSELDT-FSDLLGLDYGNGKDS---SFTQFDNTKAG 60

Query: 122 NIPKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVW 181
           +  K L +V  E  +    GR +  K Q+ RK+ YRGIRQRPWGKWAAEIRDP KG+RVW
Sbjct: 61  SKAKNLEKVANETTQKTSRGREKEGKTQRTRKNIYRGIRQRPWGKWAAEIRDPHKGVRVW 120

Query: 182 LGTYNTPEEAARAYDQAAIRIRGKKAKLNFP--PPLPSPPL---------LSVPLSLPPS 241
           LGTYNT EEAARAYD+AA RIRG+KAKLNFP  P L  PP          L+ P S   S
Sbjct: 121 LGTYNTAEEAARAYDEAAKRIRGEKAKLNFPQTPHLTQPPAKKRCMMAPELTPPSSETKS 180

Query: 242 PPQQQL------------PTTSTPIDVELKHQISTLESFLGLDP-------SPPVEP-TA 287
           PP  QL            P+ +   ++ELK QIS+LESFLGL+P       S   EP + 
Sbjct: 181 PPTPQLFMGFGYENGVYRPSEAMESEMELKEQISSLESFLGLEPDETTTELSGSAEPDSV 240

The following BLAST results are available for this feature:
BLAST of Cucsa.252810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RAP23_ARATH8.4e-3440.07Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-... [more]
RAP22_ARATH1.8e-2843.32Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-... [more]
RA212_ARATH2.6e-2742.78Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2... [more]
ERF71_ARATH3.2e-2564.04Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF07... [more]
ERF1_ORYSJ2.7e-2476.12Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=ER... [more]
BLAST of Cucsa.252810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7Z6_CUCSA8.2e-129100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G164580 PE=4 SV=1[more]
Q56E95_GOSHI7.1e-4849.22Putative ethylene responsive element binding protein 2 OS=Gossypium hirsutum PE=... [more]
A0A0B0MUY4_GOSAR6.0e-4748.84Ethylene-responsive transcription factor RAP2-3-like protein OS=Gossypium arbore... [more]
A0A0D2UVB3_GOSRA4.3e-4547.49Uncharacterized protein OS=Gossypium raimondii GN=B456_011G193600 PE=4 SV=1[more]
Q5U8L6_GOSHI2.2e-4447.10AP2/EREBP transcription factor ERF-2 OS=Gossypium hirsutum PE=2 SV=1[more]
BLAST of Cucsa.252810 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16770.14.7e-3540.07 ethylene-responsive element binding protein[more]
AT3G14230.11.0e-2943.32 related to AP2 2[more]
AT1G53910.11.5e-2842.78 related to AP2 12[more]
AT2G47520.11.8e-2664.04 Integrase-type DNA-binding superfamily protein[more]
AT1G72360.29.0e-2642.58 Integrase-type DNA-binding superfamily protein[more]
BLAST of Cucsa.252810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432884|ref|XP_004134228.1|1.2e-128100.00PREDICTED: ethylene-responsive transcription factor RAP2-3-like [Cucumis sativus... [more]
gi|659076877|ref|XP_008438910.1|2.1e-10185.65PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X1 [Cucumis m... [more]
gi|659076879|ref|XP_008438911.1|3.7e-9884.35PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X2 [Cucumis m... [more]
gi|62131147|gb|AAX68525.1|1.0e-4749.22putative ethylene responsive element binding protein 2 [Gossypium hirsutum][more]
gi|728824721|gb|KHG05913.1|8.7e-4748.84Ethylene-responsive transcription factor RAP2-3 -like protein [Gossypium arboreu... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.252810.1Cucsa.252810.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 176..192
score: 6.4E-11coord: 154..165
score: 6.4
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 153..210
score: 8.9
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 152..202
score: 1.4
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 153..216
score: 6.1
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 153..210
score: 24
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 152..211
score: 3.4
NoneNo IPR availablePANTHERPTHR31190FAMILY NOT NAMEDcoord: 97..275
score: 1.2
NoneNo IPR availablePANTHERPTHR31190:SF18SUBFAMILY NOT NAMEDcoord: 97..275
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.252810Cla021765Watermelon (97103) v1cgywmB479
Cucsa.252810Cla009283Watermelon (97103) v1cgywmB483
Cucsa.252810Csa6G318160Cucumber (Chinese Long) v2cgycuB371
Cucsa.252810Csa3G164580Cucumber (Chinese Long) v2cgycuB366
Cucsa.252810MELO3C006688Melon (DHL92) v3.5.1cgymeB439
Cucsa.252810MELO3C021306Melon (DHL92) v3.5.1cgymeB430
Cucsa.252810ClCG06G004930Watermelon (Charleston Gray)cgywcgB453
Cucsa.252810ClCG05G006290Watermelon (Charleston Gray)cgywcgB451
Cucsa.252810CSPI06G17380Wild cucumber (PI 183967)cgycpiB390
Cucsa.252810CSPI03G14710Wild cucumber (PI 183967)cgycpiB383
Cucsa.252810CmaCh14G016060Cucurbita maxima (Rimu)cgycmaB0709
Cucsa.252810CmaCh06G015430Cucurbita maxima (Rimu)cgycmaB0727
Cucsa.252810CmaCh08G012420Cucurbita maxima (Rimu)cgycmaB0731
Cucsa.252810CmoCh08G012150Cucurbita moschata (Rifu)cgycmoB0720
Cucsa.252810CmoCh14G016420Cucurbita moschata (Rifu)cgycmoB0700
Cucsa.252810Lsi09G014540Bottle gourd (USVL1VR-Ls)cgylsiB412
Cucsa.252810Lsi05G015640Bottle gourd (USVL1VR-Ls)cgylsiB420
Cucsa.252810MELO3C021306.2Melon (DHL92) v3.6.1cgymedB425
Cucsa.252810MELO3C006688.2Melon (DHL92) v3.6.1cgymedB432
Cucsa.252810CsaV3_6G022740Cucumber (Chinese Long) v3cgycucB396
Cucsa.252810CsaV3_3G014920Cucumber (Chinese Long) v3cgycucB387
Cucsa.252810Cla97C05G087870Watermelon (97103) v2cgywmbB452
Cucsa.252810Cla97C06G114420Watermelon (97103) v2cgywmbB453
Cucsa.252810Bhi01G000749Wax gourdcgywgoB522
Cucsa.252810Bhi12G001800Wax gourdcgywgoB505
Cucsa.252810Carg19647Silver-seed gourdcarcgyB0329
Cucsa.252810Carg18858Silver-seed gourdcarcgyB0788
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cucsa.252810Cucsa.069280Cucumber (Gy14) v1cgycgyB020
The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.252810Silver-seed gourdcarcgyB0083
Cucsa.252810Silver-seed gourdcarcgyB1072
Cucsa.252810Cucumber (Chinese Long) v3cgycucB382
Cucsa.252810Cucurbita maxima (Rimu)cgycmaB0714
Cucsa.252810Cucurbita maxima (Rimu)cgycmaB0706
Cucsa.252810Cucurbita moschata (Rifu)cgycmoB0707
Cucsa.252810Cucurbita moschata (Rifu)cgycmoB0718
Cucsa.252810Cucurbita pepo (Zucchini)cgycpeB0671
Cucsa.252810Cucurbita pepo (Zucchini)cgycpeB0678
Cucsa.252810Cucurbita pepo (Zucchini)cgycpeB0682
Cucsa.252810Cucurbita pepo (Zucchini)cgycpeB0687
Cucsa.252810Melon (DHL92) v3.6.1cgymedB427