CmaCh14G016060 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh14G016060
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionEthylene-responsive transcription factor
LocationCma_Chr14 : 12073336 .. 12074243 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCATTTCATTCTCTTCCTCACTCCATCAACATGTGCGGCGGCGCTATCATCTCCGATCCCGTCGTCGACACCACCTTCTCCGACCTCCTCGGCCTCGGCCTCGACCTCTCCGCCAATTCTTCACACCCCTCTCAAGGTACACTACTCCCTCTCTGTTTCTTCAATTCAATTATTGGGTCTTTTTCTTAATCTTTGATTCTTATTATGTTAGTCAAAATTGAGAACCCCAACGGCTGTGAAGAAGCACCGGCGGCGGCGGCGACGGAGGGAGTGGCTGGTGAAGTCAAGAAGCCTAAAAAAATTCGCAAAACCAAATACAGAGGAATCCGGCAGCGGCCGTGGGGAAAATGGGCCGCTGAGATTCGAGACCCACAAAAGGGCCTCCGTGTTTGGCTCGGTACCTACAACACCGCTGAAGAAGCTGCCATAGCTTACGACCAAGCCGCGGTAAGAATCAGAGGCAAAAAGGCCAAACTCAACTTCCCTCACCCACCGCCGCCGCCGCAACAACATCTCCCACCAAACAACATCGAACCCACCTTGGAATCATTTTTGGGTCTCTACCCCTCGCCCTCGGTGGAGCCCTCGGCCGACCTCTGGTGGGTCGATGATCTTCTCATATATCAACAACAAAATTTTCAACTCTAAAAATTCCCAAAGCCATTAAAAATTTGACAACTAAAATAAATAAATAGATGTCAGATTTTAACTACGAACTCATCCATCCATCGAAAGGTTACATATTTTAGTTACAATATGGTATGTTAATGAGATATAATGTTATGAATGAGACAAAAGTTTATAAAAATTAAGATATTAAATTGGGTGTGTTTTTGTGAAGTTTAAAGTTGTGTTGTCGTTATTAGCGTTAGATTTGGGAAAGGATTTGATAATTCATAATGGCCC

mRNA sequence

TTTCATTTCATTCTCTTCCTCACTCCATCAACATGTGCGGCGGCGCTATCATCTCCGATCCCGTCGTCGACACCACCTTCTCCGACCTCCTCGGCCTCGGCCTCGACCTCTCCGCCAATTCTTCACACCCCTCTCAAGTCAAAATTGAGAACCCCAACGGCTGTGAAGAAGCACCGGCGGCGGCGGCGACGGAGGGAGTGGCTGGTGAAGTCAAGAAGCCTAAAAAAATTCGCAAAACCAAATACAGAGGAATCCGGCAGCGGCCGTGGGGAAAATGGGCCGCTGAGATTCGAGACCCACAAAAGGGCCTCCGTGTTTGGCTCGGTACCTACAACACCGCTGAAGAAGCTGCCATAGCTTACGACCAAGCCGCGGTAAGAATCAGAGGCAAAAAGGCCAAACTCAACTTCCCTCACCCACCGCCGCCGCCGCAACAACATCTCCCACCAAACAACATCGAACCCACCTTGGAATCATTTTTGGGTCTCTACCCCTCGCCCTCGGTGGAGCCCTCGGCCGACCTCTGGTGGGTCGATGATCTTCTCATATATCAACAACAAAATTTTCAACTCTAAAAATTCCCAAAGCCATTAAAAATTTGACAACTAAAATAAATAAATAGATGTCAGATTTTAACTACGAACTCATCCATCCATCGAAAGGTTACATATTTTAGTTACAATATGGTATGTTAATGAGATATAATGTTATGAATGAGACAAAAGTTTATAAAAATTAAGATATTAAATTGGGTGTGTTTTTGTGAAGTTTAAAGTTGTGTTGTCGTTATTAGCGTTAGATTTGGGAAAGGATTTGATAATTCATAATGGCCC

Coding sequence (CDS)

ATGTGCGGCGGCGCTATCATCTCCGATCCCGTCGTCGACACCACCTTCTCCGACCTCCTCGGCCTCGGCCTCGACCTCTCCGCCAATTCTTCACACCCCTCTCAAGTCAAAATTGAGAACCCCAACGGCTGTGAAGAAGCACCGGCGGCGGCGGCGACGGAGGGAGTGGCTGGTGAAGTCAAGAAGCCTAAAAAAATTCGCAAAACCAAATACAGAGGAATCCGGCAGCGGCCGTGGGGAAAATGGGCCGCTGAGATTCGAGACCCACAAAAGGGCCTCCGTGTTTGGCTCGGTACCTACAACACCGCTGAAGAAGCTGCCATAGCTTACGACCAAGCCGCGGTAAGAATCAGAGGCAAAAAGGCCAAACTCAACTTCCCTCACCCACCGCCGCCGCCGCAACAACATCTCCCACCAAACAACATCGAACCCACCTTGGAATCATTTTTGGGTCTCTACCCCTCGCCCTCGGTGGAGCCCTCGGCCGACCTCTGGTGGGTCGATGATCTTCTCATATATCAACAACAAAATTTTCAACTCTAA

Protein sequence

MCGGAIISDPVVDTTFSDLLGLGLDLSANSSHPSQVKIENPNGCEEAPAAAATEGVAGEVKKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAAIAYDQAAVRIRGKKAKLNFPHPPPPPQQHLPPNNIEPTLESFLGLYPSPSVEPSADLWWVDDLLIYQQQNFQL
Homology
[Close]
BLAST of CmaCh14G016060 vs. Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-27
Identity = 81/157 (51.59%), Postives = 94/157 (59.87%), Query Frame = 1 

Query: 1   MCGGAIISD--PVVDTT-----FSDLLGLGLDLSANSSH---PSQVKIENPNGCEEAPAA 60
           MCGGAIISD  P+V         ++ L   LD SA        S  K+   N       A
Sbjct: 1   MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPTNQVNVKEEA 60

Query: 61  AATEGVAGEVKKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAAIAY 120
              E      K+ K  RK  YRGIR+RPWGKWAAEIRDP+KG+RVWLGT+NTAEEAA+AY
Sbjct: 61  VKKEQATEPGKRRK--RKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAY 120

Query: 121 DQAAVRIRGKKAKLNFP--HPPPPPQQHLPPNNIEPT 146
           D AA +IRG KAKLNFP  H PPPP    PP++   T
Sbjct: 121 DVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRST 155

[Close]
BLAST of CmaCh14G016060 vs. Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.1e-26
Identity = 66/128 (51.56%), Postives = 78/128 (60.94%), Query Frame = 1 

Query: 1   MCGGAIISDPVVDTTFSDLLGLGLDLSANSSHPSQVKIENPNGCEEAPAAAATEGVAGEV 60
           MCGGAIISD +   + S+   LG   S     P  V                      E 
Sbjct: 1   MCGGAIISDFIWSKSESEPSQLGSVSSRKKRKPVSVS---------------------EE 60

Query: 61  KKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAAIAYDQAAVRIRGK 120
           +  K+ RK  YRGIRQRPWGKWAAEIRDP KG+RVWLGT+ TA+EAA AYD AA++IRG+
Sbjct: 61  RDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGR 107

Query: 121 KAKLNFPH 129
           KAKLNFP+
Sbjct: 121 KAKLNFPN 107

[Close]
BLAST of CmaCh14G016060 vs. Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-24
Identity = 60/118 (50.85%), Postives = 78/118 (66.10%), Query Frame = 1 

Query: 61  KKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAAIAYDQAAVRIRGK 120
           K  K+ RK ++RGIRQRPWGKWAAEIRDP+KG+RVWLGT+N+AEEAA AYD  A RIRGK
Sbjct: 110 KSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGK 169

Query: 121 KAKLNFPHPPPPPQQHLPPNNIEPTLESFLGLYPSPSVEPSADLWWVDDLLIYQQQNF 179
           KAK+NFP  P   Q+    +      +S   +   P+V+P+ +     +  +Y   NF
Sbjct: 170 KAKVNFPEAPTTAQKRRAGSTTAKAPKS--SVEQKPTVKPAFNNLANANAFVYPSANF 225

[Close]
BLAST of CmaCh14G016060 vs. Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 2.5e-23
Identity = 53/89 (59.55%), Postives = 63/89 (70.79%), Query Frame = 1 

Query: 67  RKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAAIAYDQAAVRIRGKKAKLNF 126
           +K +YRG+RQRPWGKWAAEIRDP +  RVWLGT++TAE AA AYD+AA+R RG KAKLNF
Sbjct: 73  KKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNF 132

Query: 127 PH-----PPPPPQQHLPPNNIEPTLESFL 151
           P      PPPPP    P + +    E  L
Sbjct: 133 PEDVRILPPPPPLLRSPADTVANKAEEDL 161

[Close]
BLAST of CmaCh14G016060 vs. Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-22
Identity = 51/74 (68.92%), Postives = 61/74 (82.43%), Query Frame = 1 

Query: 55  GVAGEVKKP-KKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAAIAYDQA 114
           G+ G+ +K   + RK +YRGIRQRPWGKWAAEIRDP++G R+WLGT+ TAEEAA AYD A
Sbjct: 108 GLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAA 167

Query: 115 AVRIRGKKAKLNFP 128
           A RIRG KAK+NFP
Sbjct: 168 ARRIRGSKAKVNFP 181

[Close]
BLAST of CmaCh14G016060 vs. TrEMBL
Match: A0A0A0L7Z6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G164580 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.0e-52
Identity = 128/225 (56.89%), Postives = 142/225 (63.11%), Query Frame = 1 

Query: 1   MCGGAIISD--------------PVVDTTFSDLLGLGLDLSA------NSSHPSQVKIEN 60
           MCGGAIISD              P +DTTFSDLLGL L          N++ P+ V    
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDNNI 60

Query: 61  PNGCEEAPA--AAATEGVAGEVKKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120
           P    +         E   GE+KKP+K+RK+KYRGIRQRPWGKWAAEIRDP+KGLRVWLG
Sbjct: 61  PKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLG 120

Query: 121 TYNTAEEAAIAYDQAAVRIRGKKAKLNFPH--------------PPPPPQQHLP----PN 180
           TYNT EEAA AYDQAA+RIRGKKAKLNFP               PP PPQQ LP    P 
Sbjct: 121 TYNTPEEAARAYDQAAIRIRGKKAKLNFPPPLPSPPLLSVPLSLPPSPPQQQLPTTSTPI 180

[Close]
BLAST of CmaCh14G016060 vs. TrEMBL
Match: V4RFU7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005701mg PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.5e-31
Identity = 90/186 (48.39%), Postives = 114/186 (61.29%), Query Frame = 1 

Query: 1   MCGGAIISD-----PVVDT-------------TFSDLLGLGLDLSANSSHPSQ-VKIENP 60
           MCGGA+I+D     PV                + SDLLGL  +     SHP Q +K++N 
Sbjct: 1   MCGGALIADYDEVRPVRRERKLTSEDLWSEFGSISDLLGLDYN---GKSHPKQPLKVKNE 60

Query: 61  NGCEEAPAAAATEGVAGEVKKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYN 120
              + +  AA  EG   + KK +++RK  YRGIRQRPWGKWAAEIRDP KG+RVWLGT+N
Sbjct: 61  KAEDSSNKAARVEG---KEKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFN 120

Query: 121 TAEEAAIAYDQAAVRIRGKKAKLNFPHPPPP------PQQHLP-PNNIEPTLESFLGLYP 161
           TAEEAA AYD+AA RIRG KAKLNF  PPPP       ++ +P P   +P  E+ +G  P
Sbjct: 121 TAEEAARAYDEAAKRIRGDKAKLNFAQPPPPIAPPPAKKRCMPSPELTQPRFET-IGTPP 179

[Close]
BLAST of CmaCh14G016060 vs. TrEMBL
Match: A0A067G8C7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025382mg PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.9e-30
Identity = 90/186 (48.39%), Postives = 114/186 (61.29%), Query Frame = 1 

Query: 1   MCGGAIISD-----PVVDT-------------TFSDLLGLGLDLSANSSHPSQ-VKIENP 60
           MCGGA+I+D     PV                + SDLLGL  +     SHP Q +K++N 
Sbjct: 1   MCGGALIADYDEVRPVRRERKLTSEDLWSEFGSISDLLGLDYN---GKSHPKQPLKVKNE 60

Query: 61  NGCEEAPAAAATEGVAGEVKKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYN 120
              + +  AA TE    + KK +++RK  YRGIRQRPWGKWAAEIRDP KG+RVWLGT+N
Sbjct: 61  KAEDSSNKAARTEW---KEKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFN 120

Query: 121 TAEEAAIAYDQAAVRIRGKKAKLNFPHPPPP------PQQHLP-PNNIEPTLESFLGLYP 161
           TAEEAA AYD+AA RIRG KAKLNF  PPPP       ++ +P P   +P  E+ +G  P
Sbjct: 121 TAEEAARAYDEAAKRIRGDKAKLNFAQPPPPIAPPPAKKRCMPSPELTQPRFET-IGTPP 179

[Close]
BLAST of CmaCh14G016060 vs. TrEMBL
Match: D5L0Z9_MALDO (AP2 domain class transcription factor OS=Malus domestica GN=AP2D15 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.2e-30
Identity = 82/159 (51.57%), Postives = 93/159 (58.49%), Query Frame = 1 

Query: 1   MCGGAIISDPVVDT---------------TFSDLLGLGLDLSANSSHPSQVKIENPN--- 60
           MCGGAIISD +                  T SDLLG+    S N        ++ P    
Sbjct: 1   MCGGAIISDFIAAKRGRKLTEKDLWSELDTISDLLGIDHSNSINKQPEDYKVVQKPKPSV 60

Query: 61  --GCEEAPAAAATEGVAGEVKKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTY 120
                +A    AT   A    + K++RK  YRGIRQRPWGKWAAEIRDP+KG+RVWLGTY
Sbjct: 61  TKATSDAKPKKATGAAAAAAAEGKRVRKNVYRGIRQRPWGKWAAEIRDPRKGVRVWLGTY 120

Query: 121 NTAEEAAIAYDQAAVRIRGKKAKLNFPHPPPPPQQHLPP 140
           NTAEEAA AYD+AAVRIRG KAKLNF    PPP   LPP
Sbjct: 121 NTAEEAARAYDEAAVRIRGDKAKLNFSQ--PPPSSLLPP 157

[Close]
BLAST of CmaCh14G016060 vs. TrEMBL
Match: A0A0D3QIW3_9ROSA (Ethylene response factor 2 OS=Pyrus x bretschneideri GN=ERF2 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.5e-30
Identity = 88/184 (47.83%), Postives = 104/184 (56.52%), Query Frame = 1 

Query: 1   MCGGAIISDPVVDT---------------TFSDLLGLGLDLSANSSHPSQVKIENPNGC- 60
           MCGGAIISD +                  T SDLLG+    S N    +   ++ P    
Sbjct: 1   MCGGAIISDFIAAKRGRKLTAQDLWSDLGTISDLLGIDHSNSINKQPENHKVVQKPKPSI 60

Query: 61  ------EEAPAAAATEGVAGEVKKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120
                 +E P  A+    A E    K++RK  YRGIRQRPWGKWAAEIRDP KG+RVWLG
Sbjct: 61  TKVVTSDEKPKKASGSAAAAE---GKRVRKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLG 120

Query: 121 TYNTAEEAAIAYDQAAVRIRGKKAKLNFPHPPP-PPQQHLPPNNIEPTLESFLGLYPSPS 162
           TY+TAEEAA AYD+AAVRIRG KAKLNF  PPP  P   L P+   PT    + +  S  
Sbjct: 121 TYDTAEEAARAYDEAAVRIRGDKAKLNFAQPPPSSPLPSLAPDTPPPTKRRCI-VAESTR 180

[Close]
BLAST of CmaCh14G016060 vs. TAIR10
Match: AT3G16770.1 (AT3G16770.1 ethylene-responsive element binding protein)

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-28
Identity = 81/157 (51.59%), Postives = 94/157 (59.87%), Query Frame = 1 

Query: 1   MCGGAIISD--PVVDTT-----FSDLLGLGLDLSANSSH---PSQVKIENPNGCEEAPAA 60
           MCGGAIISD  P+V         ++ L   LD SA        S  K+   N       A
Sbjct: 1   MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPTNQVNVKEEA 60

Query: 61  AATEGVAGEVKKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAAIAY 120
              E      K+ K  RK  YRGIR+RPWGKWAAEIRDP+KG+RVWLGT+NTAEEAA+AY
Sbjct: 61  VKKEQATEPGKRRK--RKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAY 120

Query: 121 DQAAVRIRGKKAKLNFP--HPPPPPQQHLPPNNIEPT 146
           D AA +IRG KAKLNFP  H PPPP    PP++   T
Sbjct: 121 DVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRST 155

[Close]
BLAST of CmaCh14G016060 vs. TAIR10
Match: AT2G47520.1 (AT2G47520.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 119.4 bits (298), Expect = 2.3e-27
Identity = 66/128 (51.56%), Postives = 78/128 (60.94%), Query Frame = 1 

Query: 1   MCGGAIISDPVVDTTFSDLLGLGLDLSANSSHPSQVKIENPNGCEEAPAAAATEGVAGEV 60
           MCGGAIISD +   + S+   LG   S     P  V                      E 
Sbjct: 1   MCGGAIISDFIWSKSESEPSQLGSVSSRKKRKPVSVS---------------------EE 60

Query: 61  KKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAAIAYDQAAVRIRGK 120
           +  K+ RK  YRGIRQRPWGKWAAEIRDP KG+RVWLGT+ TA+EAA AYD AA++IRG+
Sbjct: 61  RDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGR 107

Query: 121 KAKLNFPH 129
           KAKLNFP+
Sbjct: 121 KAKLNFPN 107

[Close]
BLAST of CmaCh14G016060 vs. TAIR10
Match: AT5G50080.1 (AT5G50080.1 ethylene response factor 110)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-24
Identity = 53/89 (59.55%), Postives = 63/89 (70.79%), Query Frame = 1 

Query: 67  RKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAAIAYDQAAVRIRGKKAKLNF 126
           +K +YRG+RQRPWGKWAAEIRDP +  RVWLGT++TAE AA AYD+AA+R RG KAKLNF
Sbjct: 73  KKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNF 132

Query: 127 PH-----PPPPPQQHLPPNNIEPTLESFL 151
           P      PPPPP    P + +    E  L
Sbjct: 133 PEDVRILPPPPPLLRSPADTVANKAEEDL 161

[Close]
BLAST of CmaCh14G016060 vs. TAIR10
Match: AT1G53910.1 (AT1G53910.1 related to AP2 12)

HSP 1 Score: 107.8 bits (268), Expect = 6.9e-24
Identity = 51/74 (68.92%), Postives = 61/74 (82.43%), Query Frame = 1 

Query: 55  GVAGEVKKP-KKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAAIAYDQA 114
           G+ G+ +K   + RK +YRGIRQRPWGKWAAEIRDP++G R+WLGT+ TAEEAA AYD A
Sbjct: 108 GLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAA 167

Query: 115 AVRIRGKKAKLNFP 128
           A RIRG KAK+NFP
Sbjct: 168 ARRIRGSKAKVNFP 181

[Close]
BLAST of CmaCh14G016060 vs. TAIR10
Match: AT2G33710.2 (AT2G33710.2 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 107.8 bits (268), Expect = 6.9e-24
Identity = 62/140 (44.29%), Postives = 82/140 (58.57%), Query Frame = 1 

Query: 48  PAAAATEGVAGEVKKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAA 107
           P++   +  +  +++    R+  YRG+RQRPWGKWAAEIRDP K  RVWLGT++TAEEAA
Sbjct: 47  PSSIDDQSSSLTLQEKSNSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAA 106

Query: 108 IAYDQAAVRIRGKKAKLNFPHPPPPPQQHLPPNNIEPTLESFLGLYPSPSVE-------- 167
           +AYD+AA   RG KAKLNFP       +H+    + PT      LYPSP+          
Sbjct: 107 LAYDKAAFEFRGHKAKLNFP-------EHI---RVNPT-----QLYPSPATSHDRIIVTP 166

Query: 168 PSADLWWVDDLLIYQQQNFQ 180
           PS       D+L+ Q  +FQ
Sbjct: 167 PSPPPPIAPDILLDQYGHFQ 171

[Close]
BLAST of CmaCh14G016060 vs. NCBI nr
Match: gi|659076879|ref|XP_008438911.1| (PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X2 [Cucumis melo])

HSP 1 Score: 228.8 bits (582), Expect = 7.6e-57
Identity = 132/225 (58.67%), Postives = 144/225 (64.00%), Query Frame = 1 

Query: 1   MCGGAIISD--------------PVVDTT-FSDLLGLGLDLSAN----SSHPSQVKIENP 60
           MCGGAIISD              P +DTT FSDLLGL L  + N    ++ PS   + N 
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDLSGTQNYLFNNTTPSANVVHNI 60

Query: 61  NGCEEAPAAAATEGVAGEVKKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYN 120
                       EG   E+KKP+K+RK+KYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYN
Sbjct: 61  PKQLSQERVEGNEGATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYN 120

Query: 121 TAEEAAIAYDQAAVRIRGKKAKLNFPHPPPPP----------------QQHLPPNNIEP- 180
           TAEEAA AYDQAA+RIRGKKAKLNFPHPPPPP                QQ LP  +  P 
Sbjct: 121 TAEEAARAYDQAAIRIRGKKAKLNFPHPPPPPSLPLPLPLPPSLPQQQQQQLPTTSATPF 180

[Close]
BLAST of CmaCh14G016060 vs. NCBI nr
Match: gi|659076877|ref|XP_008438910.1| (PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X1 [Cucumis melo])

HSP 1 Score: 226.9 bits (577), Expect = 2.9e-56
Identity = 133/228 (58.33%), Postives = 146/228 (64.04%), Query Frame = 1 

Query: 1   MCGGAIISD--------------PVVDTT-FSDLLGLGLDLSAN----SSHPSQVKIEN- 60
           MCGGAIISD              P +DTT FSDLLGL L  + N    ++ PS   + N 
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDLSGTQNYLFNNTTPSANVVHNI 60

Query: 61  PNGCEEAPA--AAATEGVAGEVKKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120
           P    +         EG   E+KKP+K+RK+KYRGIRQRPWGKWAAEIRDPQKGLRVWLG
Sbjct: 61  PKQLSQVKKERVEGNEGATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120

Query: 121 TYNTAEEAAIAYDQAAVRIRGKKAKLNFPHPPPPP----------------QQHLPPNNI 180
           TYNTAEEAA AYDQAA+RIRGKKAKLNFPHPPPPP                QQ LP  + 
Sbjct: 121 TYNTAEEAARAYDQAAIRIRGKKAKLNFPHPPPPPSLPLPLPLPPSLPQQQQQQLPTTSA 180

[Close]
BLAST of CmaCh14G016060 vs. NCBI nr
Match: gi|449432884|ref|XP_004134228.1| (PREDICTED: ethylene-responsive transcription factor RAP2-3-like [Cucumis sativus])

HSP 1 Score: 214.5 bits (545), Expect = 1.5e-52
Identity = 128/225 (56.89%), Postives = 142/225 (63.11%), Query Frame = 1 

Query: 1   MCGGAIISD--------------PVVDTTFSDLLGLGLDLSA------NSSHPSQVKIEN 60
           MCGGAIISD              P +DTTFSDLLGL L          N++ P+ V    
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDNNI 60

Query: 61  PNGCEEAPA--AAATEGVAGEVKKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120
           P    +         E   GE+KKP+K+RK+KYRGIRQRPWGKWAAEIRDP+KGLRVWLG
Sbjct: 61  PKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLG 120

Query: 121 TYNTAEEAAIAYDQAAVRIRGKKAKLNFPH--------------PPPPPQQHLP----PN 180
           TYNT EEAA AYDQAA+RIRGKKAKLNFP               PP PPQQ LP    P 
Sbjct: 121 TYNTPEEAARAYDQAAIRIRGKKAKLNFPPPLPSPPLLSVPLSLPPSPPQQQLPTTSTPI 180

[Close]
BLAST of CmaCh14G016060 vs. NCBI nr
Match: gi|568871721|ref|XP_006489030.1| (PREDICTED: ethylene-responsive transcription factor RAP2-3 [Citrus sinensis])

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30
Identity = 90/186 (48.39%), Postives = 114/186 (61.29%), Query Frame = 1 

Query: 1   MCGGAIISD-----PVVDT-------------TFSDLLGLGLDLSANSSHPSQ-VKIENP 60
           MCGGA+I+D     PV                + SDLLGL  +     SHP Q +K++N 
Sbjct: 1   MCGGALIADYDEVRPVRRERKLTSEDLWSEFGSISDLLGLDYN---GKSHPKQPLKVKNE 60

Query: 61  NGCEEAPAAAATEGVAGEVKKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYN 120
              + +  AA  EG   + KK +++RK  YRGIRQRPWGKWAAEIRDP KG+RVWLGT+N
Sbjct: 61  KAEDSSNKAARVEG---KEKKTQRVRKNVYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFN 120

Query: 121 TAEEAAIAYDQAAVRIRGKKAKLNFPHPPPP------PQQHLP-PNNIEPTLESFLGLYP 161
           TAEEAA AYD+AA RIRG KAKLNF  PPPP       ++ +P P   +P  E+ +G  P
Sbjct: 121 TAEEAARAYDEAAKRIRGDKAKLNFAQPPPPIAPPPAKKRCMPSPELTQPRFET-IGTPP 179

[Close]
BLAST of CmaCh14G016060 vs. NCBI nr
Match: gi|567852669|ref|XP_006419498.1| (hypothetical protein CICLE_v10005701mg [Citrus clementina])

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30
Identity = 90/186 (48.39%), Postives = 114/186 (61.29%), Query Frame = 1 

Query: 1   MCGGAIISD-----PVVDT-------------TFSDLLGLGLDLSANSSHPSQ-VKIENP 60
           MCGGA+I+D     PV                + SDLLGL  +     SHP Q +K++N 
Sbjct: 1   MCGGALIADYDEVRPVRRERKLTSEDLWSEFGSISDLLGLDYN---GKSHPKQPLKVKNE 60

Query: 61  NGCEEAPAAAATEGVAGEVKKPKKIRKTKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYN 120
              + +  AA  EG   + KK +++RK  YRGIRQRPWGKWAAEIRDP KG+RVWLGT+N
Sbjct: 61  KAEDSSNKAARVEG---KEKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFN 120

Query: 121 TAEEAAIAYDQAAVRIRGKKAKLNFPHPPPP------PQQHLP-PNNIEPTLESFLGLYP 161
           TAEEAA AYD+AA RIRG KAKLNF  PPPP       ++ +P P   +P  E+ +G  P
Sbjct: 121 TAEEAARAYDEAAKRIRGDKAKLNFAQPPPPIAPPPAKKRCMPSPELTQPRFET-IGTPP 179

The following BLAST results are available for this feature:
BLAST of CmaCh14G016060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RAP23_ARATH2.1e-2751.59Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-... [more]
ERF71_ARATH4.1e-2651.56Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF07... [more]
ERF1_ORYSJ1.3e-2450.85Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=ER... [more]
EF110_ARATH2.5e-2359.55Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF11... [more]
RA212_ARATH1.2e-2268.92Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2... [more]
BLAST of CmaCh14G016060 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7Z6_CUCSA1.0e-5256.89Uncharacterized protein OS=Cucumis sativus GN=Csa_3G164580 PE=4 SV=1[more]
V4RFU7_9ROSI8.5e-3148.39Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005701mg PE=4 SV=1[more]
A0A067G8C7_CITSI1.9e-3048.39Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025382mg PE=4 SV=1[more]
D5L0Z9_MALDO3.2e-3051.57AP2 domain class transcription factor OS=Malus domestica GN=AP2D15 PE=2 SV=1[more]
A0A0D3QIW3_9ROSA5.5e-3047.83Ethylene response factor 2 OS=Pyrus x bretschneideri GN=ERF2 PE=2 SV=1[more]
BLAST of CmaCh14G016060 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16770.11.2e-2851.59 ethylene-responsive element binding protein[more]
AT2G47520.12.3e-2751.56 Integrase-type DNA-binding superfamily protein[more]
AT5G50080.11.4e-2459.55 ethylene response factor 110[more]
AT1G53910.16.9e-2468.92 related to AP2 12[more]
AT2G33710.26.9e-2444.29 Integrase-type DNA-binding superfamily protein[more]
BLAST of CmaCh14G016060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076879|ref|XP_008438911.1|7.6e-5758.67PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X2 [Cucumis m... [more]
gi|659076877|ref|XP_008438910.1|2.9e-5658.33PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X1 [Cucumis m... [more]
gi|449432884|ref|XP_004134228.1|1.5e-5256.89PREDICTED: ethylene-responsive transcription factor RAP2-3-like [Cucumis sativus... [more]
gi|568871721|ref|XP_006489030.1|1.2e-3048.39PREDICTED: ethylene-responsive transcription factor RAP2-3 [Citrus sinensis][more]
gi|567852669|ref|XP_006419498.1|1.2e-3048.39hypothetical protein CICLE_v10005701mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G016060.1CmaCh14G016060.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 93..109
score: 3.6E-11coord: 71..82
score: 3.6
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 70..128
score: 8.2
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 69..119
score: 6.7
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 70..133
score: 5.8
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 70..127
score: 24
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 70..128
score: 7.19
NoneNo IPR availablePANTHERPTHR31190FAMILY NOT NAMEDcoord: 27..128
score: 2.7
NoneNo IPR availablePANTHERPTHR31190:SF30ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 15-RELATEDcoord: 27..128
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh14G016060Cucsa.252810Cucumber (Gy14) v1cgycmaB0709
CmaCh14G016060Cla021765Watermelon (97103) v1cmawmB242
CmaCh14G016060Csa3G164580Cucumber (Chinese Long) v2cmacuB253
CmaCh14G016060MELO3C006688Melon (DHL92) v3.5.1cmameB242
CmaCh14G016060ClCG05G006290Watermelon (Charleston Gray)cmawcgB233
CmaCh14G016060CSPI03G14710Wild cucumber (PI 183967)cmacpiB255
CmaCh14G016060CmoCh08G012150Cucurbita moschata (Rifu)cmacmoB279
CmaCh14G016060CmoCh14G016420Cucurbita moschata (Rifu)cmacmoB245
CmaCh14G016060Lsi05G015640Bottle gourd (USVL1VR-Ls)cmalsiB250
CmaCh14G016060Lsi09G014540Bottle gourd (USVL1VR-Ls)cmalsiB225
CmaCh14G016060MELO3C021306.2Melon (DHL92) v3.6.1cmamedB244
CmaCh14G016060MELO3C006688.2Melon (DHL92) v3.6.1cmamedB273
CmaCh14G016060CsaV3_3G014920Cucumber (Chinese Long) v3cmacucB0291
CmaCh14G016060CsaV3_6G023790Cucumber (Chinese Long) v3cmacucB0311
CmaCh14G016060Cla97C06G114420Watermelon (97103) v2cmawmbB266
CmaCh14G016060Cla97C05G087870Watermelon (97103) v2cmawmbB263
CmaCh14G016060Bhi01G000749Wax gourdcmawgoB0328
CmaCh14G016060Bhi12G001800Wax gourdcmawgoB0309
CmaCh14G016060CsGy3G014830Cucumber (Gy14) v2cgybcmaB318
CmaCh14G016060CsGy6G016860Cucumber (Gy14) v2cgybcmaB734
CmaCh14G016060Carg19647Silver-seed gourdcarcmaB0391
CmaCh14G016060Carg18858Silver-seed gourdcarcmaB0984
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh14G016060CmaCh06G015430Cucurbita maxima (Rimu)cmacmaB284
CmaCh14G016060CmaCh08G012420Cucurbita maxima (Rimu)cmacmaB298
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh14G016060Cucurbita maxima (Rimu)cmacmaB013
CmaCh14G016060Cucurbita maxima (Rimu)cmacmaB249
CmaCh14G016060Cucurbita moschata (Rifu)cmacmoB271
CmaCh14G016060Watermelon (Charleston Gray)cmawcgB236
CmaCh14G016060Watermelon (97103) v1cmawmB250
CmaCh14G016060Cucurbita pepo (Zucchini)cmacpeB270
CmaCh14G016060Cucurbita pepo (Zucchini)cmacpeB283
CmaCh14G016060Cucurbita pepo (Zucchini)cmacpeB292
CmaCh14G016060Silver-seed gourdcarcmaB1304