ClCG05G000530 (gene) Watermelon (Charleston Gray)

NameClCG05G000530
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionHomeobox leucine zipper family protein
LocationCG_Chr05 : 667572 .. 668631 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCATATCATTCACTCTCGTAACACCTGGTTTAGGAATAAAGCCTCGTGGTGACCAAACTGAATCTTAAGCAGCATGTTAAATGATGATGCTGAATATTCTCCTCCAGCATCCATGGCAGAGGCGTTTGCCATGAGAAAGAAGAGCATGAACAGAAGAAGGTTCAGCGAAGAACAGATCAAATCACTGGAGTCAATTTTCGAGTCTGAGTCAAGGCTTGAGCCCAGAAAGAAGTTGCAGCTGGCGGGAGAGCTGGGTTTGCATCCACGCCAGGTTGCAATATGGTTTCAGAACAAGAGAGCTAGATGGAAGTCAAAGCAGCTTGAACGAGACTACAGTGTTTTACGAGCTAATTACAACACTCTAGCCTCCCGGTTTGAAGCTCTTAAGAAGGAAAAGCAAGCTTTGACTATACAGGTATTTGTTCTTTGTTTCTCTAGGAAAAGACCGGCTGTTGCTTTTTGCTAATCATTGTTATTTCTTTCATTTGGGCAGTTGGAGAAGCTAAATAATCTGGTGCAGAGGTCCATGGAGGAAACTGAGAGCTGCAGGGGAGGTCTCTCCGCAGAAACCATTGATGGCAAATCTGAAAATGGCCACAGAACTAAGTATGAGTCTGAAGTAAAGCCTTGTGCGTCAGTTGAGGAGAAATCAGAACATGAATTAGAGGTTCTTTCCAACTATGGTAGTGGCATAAAGGAAGCCTATCTTGGATTAGAGGATCCCCAGCCCAGGGAACCTGCTCAAGGCTCCTTGATATCGACACCAAATTGGAGCAATTTAGACTCTGAAGGCCTTTTCAGTCAGTCCAATACCAATGGCCAGTGGTGGGACTTCTGGTCGTGAAAAGTAAAACCACCCAGAGAAACTATTAGAGGAATTGTAAACAAATAAAATTCCAACCTTTTAAATAGATCATCCTAGCAATGATTTTGGCTCACAGGACGAGGAACAGTTAAGAGCATAACGACTTCTATCAAGGATAGCAATGACTGAAATTTGGTTCTTTCAAGCACTGATGCTCCAAATTCACCACAATTTCAGATGGAATTCAGAAAAAAA

mRNA sequence

GCATATCATTCACTCTCGTAACACCTGGTTTAGGAATAAAGCCTCGTGGTGACCAAACTGAATCTTAAGCAGCATGTTAAATGATGATGCTGAATATTCTCCTCCAGCATCCATGGCAGAGGCGTTTGCCATGAGAAAGAAGAGCATGAACAGAAGAAGGTTCAGCGAAGAACAGATCAAATCACTGGAGTCAATTTTCGAGTCTGAGTCAAGGCTTGAGCCCAGAAAGAAGTTGCAGCTGGCGGGAGAGCTGGGTTTGCATCCACGCCAGGTTGCAATATGGTTTCAGAACAAGAGAGCTAGATGGAAGTCAAAGCAGCTTGAACGAGACTACAGTGTTTTACGAGCTAATTACAACACTCTAGCCTCCCGGTTTGAAGCTCTTAAGAAGGAAAAGCAAGCTTTGACTATACAGTTGGAGAAGCTAAATAATCTGGTGCAGAGGTCCATGGAGGAAACTGAGAGCTGCAGGGGAGGTCTCTCCGCAGAAACCATTGATGGCAAATCTGAAAATGGCCACAGAACTAAGTATGAGTCTGAAGTAAAGCCTTGTGCGTCAGTTGAGGAGAAATCAGAACATGAATTAGAGGTTCTTTCCAACTATGGTAGTGGCATAAAGGAAGCCTATCTTGGATTAGAGGATCCCCAGCCCAGGGAACCTGCTCAAGGCTCCTTGATATCGACACCAAATTGGAGCAATTTAGACTCTGAAGGCCTTTTCAGTCAGTCCAATACCAATGGCCAGTGGTGGGACTTCTGGTCGTGAAAAGTAAAACCACCCAGAGAAACTATTAGAGGAATTGTAAACAAATAAAATTCCAACCTTTTAAATAGATCATCCTAGCAATGATTTTGGCTCACAGGACGAGGAACAGTTAAGAGCATAACGACTTCTATCAAGGATAGCAATGACTGAAATTTGGTTCTTTCAAGCACTGATGCTCCAAATTCACCACAATTTCAGATGGAATTCAGAAAAAAA

Coding sequence (CDS)

ATGTTAAATGATGATGCTGAATATTCTCCTCCAGCATCCATGGCAGAGGCGTTTGCCATGAGAAAGAAGAGCATGAACAGAAGAAGGTTCAGCGAAGAACAGATCAAATCACTGGAGTCAATTTTCGAGTCTGAGTCAAGGCTTGAGCCCAGAAAGAAGTTGCAGCTGGCGGGAGAGCTGGGTTTGCATCCACGCCAGGTTGCAATATGGTTTCAGAACAAGAGAGCTAGATGGAAGTCAAAGCAGCTTGAACGAGACTACAGTGTTTTACGAGCTAATTACAACACTCTAGCCTCCCGGTTTGAAGCTCTTAAGAAGGAAAAGCAAGCTTTGACTATACAGTTGGAGAAGCTAAATAATCTGGTGCAGAGGTCCATGGAGGAAACTGAGAGCTGCAGGGGAGGTCTCTCCGCAGAAACCATTGATGGCAAATCTGAAAATGGCCACAGAACTAAGTATGAGTCTGAAGTAAAGCCTTGTGCGTCAGTTGAGGAGAAATCAGAACATGAATTAGAGGTTCTTTCCAACTATGGTAGTGGCATAAAGGAAGCCTATCTTGGATTAGAGGATCCCCAGCCCAGGGAACCTGCTCAAGGCTCCTTGATATCGACACCAAATTGGAGCAATTTAGACTCTGAAGGCCTTTTCAGTCAGTCCAATACCAATGGCCAGTGGTGGGACTTCTGGTCGTGA

Protein sequence

MLNDDAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTIQLEKLNNLVQRSMEETESCRGGLSAETIDGKSENGHRTKYESEVKPCASVEEKSEHELEVLSNYGSGIKEAYLGLEDPQPREPAQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS
BLAST of ClCG05G000530 vs. Swiss-Prot
Match: ATHB7_ARATH (Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana GN=ATHB-7 PE=1 SV=2)

HSP 1 Score: 194.9 bits (494), Expect = 9.7e-49
Identity = 119/259 (45.95%), Postives = 151/259 (58.30%), Query Frame = 1

Query: 2   LNDDAEYSPPASMAEAFAMRKKSM-------NRRRFSEEQIKSLESIFESESRLEPRKKL 61
           + +  EYSP    AE F   KK         N+RRFS+EQIKSLE +FESE+RLEPRKK+
Sbjct: 1   MTEGGEYSPAMMSAEPFLTMKKMKKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKV 60

Query: 62  QLAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTIQ 121
           QLA ELGL PRQVAIWFQNKRARWKSKQLE +Y++LR NY+ LAS+FE+LKKEKQAL  +
Sbjct: 61  QLARELGLQPRQVAIWFQNKRARWKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSE 120

Query: 122 LEKLNNLVQ-RSMEETESCRG-----GLSAETIDGKSENGHRTKYESEVKPCASVEEK-- 181
           L++L    Q ++ EE   C G      LS+   + ++E   R K E EV+P   +++   
Sbjct: 121 LQRLKEATQKKTQEEERQCSGDQAVVALSSTHHESENEENRRRKPE-EVRPEMEMKDDKG 180

Query: 182 ------SEHELEVLSN-YGSGIKEAYLGLEDPQPR------EPAQGSLISTPNWSNL--D 231
                   H+ E   N Y + IK  Y G  + +P       EPA   L S+ +W     D
Sbjct: 181 HHGVMCDHHDYEDDDNGYSNNIKREYFGGFEEEPDHLMNIVEPADSCLTSSDDWRGFKSD 240

BLAST of ClCG05G000530 vs. Swiss-Prot
Match: ATB12_ARATH (Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana GN=ATHB-12 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.1e-47
Identity = 112/224 (50.00%), Postives = 138/224 (61.61%), Query Frame = 1

Query: 22  KKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSK 81
           KKS N++RFSEEQIKSLE IFESE+RLEPRKK+Q+A ELGL PRQVAIWFQNKRARWK+K
Sbjct: 26  KKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTK 85

Query: 82  QLERDYSVLRANYNTLASRFEALKKEKQALTIQLEKLNNLVQRSMEET-ESCRG--GL-- 141
           QLE++Y+ LRANYN LAS+FE +KKEKQ+L  +L++LN  +QR  EE    C G  GL  
Sbjct: 86  QLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKHHECCGDQGLAL 145

Query: 142 --SAETIDGKSENGHRTKYESEVKPCASVEEKSEHELEVLSNYGSGIKEAYLGLEDPQPR 201
             S E+ +GKSE   R    S +  C               +Y + IK  Y G E+    
Sbjct: 146 SSSTESHNGKSEPEGRLDQGSVL--CND------------GDYNNNIKTEYFGFEEETDH 205

Query: 202 E-------PAQGSLISTPNWSNLDSEGLFSQSNTN-GQWWDFWS 231
           E            L S+ NW   +S+ L  QS++N   WW+FWS
Sbjct: 206 ELMNIVEKADDSCLTSSENWGGFNSDSLLDQSSSNYPNWWEFWS 235

BLAST of ClCG05G000530 vs. Swiss-Prot
Match: HOX6_ORYSI (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica GN=HOX6 PE=2 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31
Identity = 68/97 (70.10%), Postives = 81/97 (83.51%), Query Frame = 1

Query: 27  RRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLERD 86
           ++RFSEEQIKSLES+F ++++LEPR+KLQLA ELGL PRQVAIWFQNKRARWKSKQLER+
Sbjct: 31  KKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERE 90

Query: 87  YSVLRANYNTLASRFEALKKEKQALTIQLEKLNNLVQ 124
           YS LR +Y+ L   +E+LKKEK AL  QLEKL  ++Q
Sbjct: 91  YSALRDDYDALLCSYESLKKEKLALIKQLEKLAEMLQ 127

BLAST of ClCG05G000530 vs. Swiss-Prot
Match: HOX6_ORYSJ (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica GN=HOX6 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31
Identity = 68/97 (70.10%), Postives = 81/97 (83.51%), Query Frame = 1

Query: 27  RRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLERD 86
           ++RFSEEQIKSLES+F ++++LEPR+KLQLA ELGL PRQVAIWFQNKRARWKSKQLER+
Sbjct: 31  KKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERE 90

Query: 87  YSVLRANYNTLASRFEALKKEKQALTIQLEKLNNLVQ 124
           YS LR +Y+ L   +E+LKKEK AL  QLEKL  ++Q
Sbjct: 91  YSALRDDYDALLCSYESLKKEKLALIKQLEKLAEMLQ 127

BLAST of ClCG05G000530 vs. Swiss-Prot
Match: HOX22_ORYSJ (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. japonica GN=HOX22 PE=2 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 7.7e-30
Identity = 69/123 (56.10%), Postives = 87/123 (70.73%), Query Frame = 1

Query: 27  RRRFSEEQIKSLESIFESE-SRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLER 86
           +RRF+EEQI+SLES+F +  ++LEPR+K +LA ELGL PRQVAIWFQNKRARW+SKQLE 
Sbjct: 74  KRRFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEH 133

Query: 87  DYSVLRANYNTLASRFEALKKEKQALTIQLEKLNNLVQRSMEETESCRGGLSAETIDGKS 146
           DY+ LR+ Y+ L SR E+LK+EK ALT+QL +L   ++    E  S  GG +       S
Sbjct: 134 DYAALRSKYDALHSRVESLKQEKLALTVQLHELRERLRE--REERSGNGGAATTAASSSS 193

Query: 147 ENG 149
            NG
Sbjct: 194 CNG 194

BLAST of ClCG05G000530 vs. TrEMBL
Match: A0A0A0L317_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119240 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 2.8e-119
Identity = 216/230 (93.91%), Postives = 222/230 (96.52%), Query Frame = 1

Query: 1   MLNDDAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL 60
           MLN+DAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL
Sbjct: 1   MLNEDAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL 60

Query: 61  GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTIQLEKLNN 120
           GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALT+QL+KLNN
Sbjct: 61  GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQLQKLNN 120

Query: 121 LVQRSMEETESCRGGLSAETIDGKSENGHRTKYESEVKPCASVEEKSEHELEVLSNYGSG 180
           LVQRSMEETESCRG LS ETIDGKSE  HRTKYESEVKPC S EEKSEHELEVLSNYGSG
Sbjct: 121 LVQRSMEETESCRGVLSIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLSNYGSG 180

Query: 181 IKEAYLGLEDPQPREPAQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 231
           +KEAY+GLEDPQ RE +QGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS
Sbjct: 181 VKEAYIGLEDPQLRESSQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 230

BLAST of ClCG05G000530 vs. TrEMBL
Match: B9I924_POPTR (Homeobox leucine zipper family protein OS=Populus trichocarpa GN=POPTR_0014s09860g PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 7.7e-69
Identity = 142/238 (59.66%), Postives = 178/238 (74.79%), Query Frame = 1

Query: 4   DDAEYSPPASM------AEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLA 63
           D  EYSP A+       +   + +KK+  +RRFS+EQIKSLE++FESE+RLEPRKK+QLA
Sbjct: 3   DGGEYSPSATEPFSCLNSVTTSRKKKNKIKRRFSDEQIKSLETMFESETRLEPRKKMQLA 62

Query: 64  GELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTIQLEK 123
            ELGL PRQVAIWFQNKRARWKSKQLERDYS+LRANYN+LASRFE LKKEKQAL IQL+K
Sbjct: 63  RELGLQPRQVAIWFQNKRARWKSKQLERDYSMLRANYNSLASRFETLKKEKQALAIQLQK 122

Query: 124 LNNLVQRSMEETESCRGGLSAETIDGKSENGHRTKYESEVKPCASVEEKSEHELEVLSNY 183
           LN+L+++ +EE E C  G +  + +G+SENG  TK ESE KP  S+E+  EH L VLS+ 
Sbjct: 123 LNDLMKKPVEEGECCGQGAAVNSSEGESENGDATKGESETKPRLSIEQ-PEHGLGVLSDE 182

Query: 184 GSGIKEAYLGLEDPQPR-----EPAQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 231
            S IK  Y  LE+ +P      EPA+GSL S  +W ++DS+GLF QS++  QWWDFW+
Sbjct: 183 DSSIKVDYFELEE-EPNLMSMVEPAEGSLTSQEDWGSIDSDGLFDQSSSGYQWWDFWA 238

BLAST of ClCG05G000530 vs. TrEMBL
Match: B9GR61_POPTR (Homeobox leucine zipper family protein OS=Populus trichocarpa GN=POPTR_0002s17680g PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.1e-67
Identity = 143/240 (59.58%), Postives = 176/240 (73.33%), Query Frame = 1

Query: 4   DDAEYSPPASMAEAFAM--------RKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQ 63
           D  EYSP A+  E F+         +KK+ N+RRFS+EQIKSLES+FESE+RLEPRKK+Q
Sbjct: 3   DGGEYSPSAT--EPFSCMNGVTTSRKKKNKNKRRFSDEQIKSLESMFESETRLEPRKKMQ 62

Query: 64  LAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTIQL 123
           LA ELGL PRQVAIWFQNKRARWKSKQLERD+S+LRANYN+LASRFE LKKEKQAL IQL
Sbjct: 63  LAKELGLQPRQVAIWFQNKRARWKSKQLERDFSILRANYNSLASRFETLKKEKQALVIQL 122

Query: 124 EKLNNLVQRSMEETESCRGGLSAETIDGKSENGHRTKYESEVKPCASVEEKSEHELEVLS 183
           +K+N+L+++  EE E C  G +  +I+GKSEN   T  ESE  P  S+ E+ EH L VLS
Sbjct: 123 QKINDLMKKPGEEGECCGQGPAVNSIEGKSENADTTMGESETNPRLSI-ERPEHGLGVLS 182

Query: 184 NYGSGIKEAYLGLEDPQPR-----EPAQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 231
           +  S IK  Y  LE+ +P      EPA GSL S  +W +LDS+ LF QS+++ QWWDFW+
Sbjct: 183 DEDSSIKAEYFELEE-EPNLISMVEPADGSLTSQEDWGSLDSDRLFDQSSSDYQWWDFWA 238

BLAST of ClCG05G000530 vs. TrEMBL
Match: A0A096YDU1_ROSHC (Homeobox-leucine zipper protein 1 OS=Rosa hybrid cultivar GN=HB1 PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 9.7e-64
Identity = 147/248 (59.27%), Postives = 173/248 (69.76%), Query Frame = 1

Query: 4   DDAEYSPPASMAEAFA-----------MRKKSM--NRRRFSEEQIKSLESIFESESRLEP 63
           D   YSP    AEAF+           ++KKS   N++RFS+EQI+SLESIFESESRLEP
Sbjct: 5   DRVGYSPSPEEAEAFSYMNDSLGAGSSLKKKSSKNNKKRFSDEQIRSLESIFESESRLEP 64

Query: 64  RKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQA 123
           RKKLQLA ELGL PRQVAIWFQNKRARWKSKQLERDYS+LRANYN LASRFEALKKEKQA
Sbjct: 65  RKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYSILRANYNNLASRFEALKKEKQA 124

Query: 124 LTIQLEKLNNLVQRSMEETESCRGGLSAETIDGKSENG-HRTKYESEVKPCASVE-EKSE 183
           L  QL+KLN+ +QR  EE  +        +IDG+S+NG   T+ ESE KP   +  EKSE
Sbjct: 125 LVTQLQKLNDKMQRPKEERNN--------SIDGESDNGDDATRSESEGKPNYQMSLEKSE 184

Query: 184 HELEVLSNYGSGIKEAYLGLEDPQPR-----EPAQGSLISTPNWSNLDSE-GLFSQSNTN 231
           H L V+S+  S IK  Y GLE+ +P      E A GSL S  +W  L+S+ GLF QS ++
Sbjct: 185 HRLRVMSDDDSSIKAEYFGLEE-EPNLVNFVESADGSLTSPEDWGRLNSDGGLFDQSTSD 243

BLAST of ClCG05G000530 vs. TrEMBL
Match: A0A067JWT5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14207 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.1e-62
Identity = 140/248 (56.45%), Postives = 169/248 (68.15%), Query Frame = 1

Query: 1   MLNDDAEYSPPASMAEAF----------AMRKKSMNRRRFSEEQIKSLESIFESESRLEP 60
           M +++  YSP AS  + F          + RKK+ N+RRFS+EQIKSLE++FESESRLEP
Sbjct: 54  MFDEEEVYSPCASAEDLFTAMDTALSTTSRRKKTKNKRRFSDEQIKSLETMFESESRLEP 113

Query: 61  RKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQA 120
           RKKLQLA ELGL PRQVAIWFQNKRARWKSKQLERDYSVLRANYN LASRFE LKKEKQA
Sbjct: 114 RKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYSVLRANYNNLASRFETLKKEKQA 173

Query: 121 LTIQLEKLNNLVQRSMEETESCRGGLSAETIDGKSENG-HRTKYESEVKPCASVEEKSEH 180
           L IQL+KLN L+++  EE E C          G+ E G + ++ ESE K   S  E+S +
Sbjct: 174 LAIQLQKLNELIEKPREEGECC----------GEQETGVNSSEGESEAKGVISSFERSRN 233

Query: 181 ELEVLSNYGSGIKEAYLGLEDPQPR------EPAQGSLISTPNWSNLDSEGLFSQSNT-N 231
            L V S+  S IK  Y GLE+          E A GSL S  +W +L+S+GLF QSN+ +
Sbjct: 234 GLGVASDEDSSIKVEYFGLEEEPDNNLISMVEAADGSLTSQEDWRSLESDGLFDQSNSGS 291

BLAST of ClCG05G000530 vs. TAIR10
Match: AT2G46680.1 (AT2G46680.1 homeobox 7)

HSP 1 Score: 194.9 bits (494), Expect = 5.5e-50
Identity = 119/259 (45.95%), Postives = 151/259 (58.30%), Query Frame = 1

Query: 2   LNDDAEYSPPASMAEAFAMRKKSM-------NRRRFSEEQIKSLESIFESESRLEPRKKL 61
           + +  EYSP    AE F   KK         N+RRFS+EQIKSLE +FESE+RLEPRKK+
Sbjct: 1   MTEGGEYSPAMMSAEPFLTMKKMKKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKV 60

Query: 62  QLAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTIQ 121
           QLA ELGL PRQVAIWFQNKRARWKSKQLE +Y++LR NY+ LAS+FE+LKKEKQAL  +
Sbjct: 61  QLARELGLQPRQVAIWFQNKRARWKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSE 120

Query: 122 LEKLNNLVQ-RSMEETESCRG-----GLSAETIDGKSENGHRTKYESEVKPCASVEEK-- 181
           L++L    Q ++ EE   C G      LS+   + ++E   R K E EV+P   +++   
Sbjct: 121 LQRLKEATQKKTQEEERQCSGDQAVVALSSTHHESENEENRRRKPE-EVRPEMEMKDDKG 180

Query: 182 ------SEHELEVLSN-YGSGIKEAYLGLEDPQPR------EPAQGSLISTPNWSNL--D 231
                   H+ E   N Y + IK  Y G  + +P       EPA   L S+ +W     D
Sbjct: 181 HHGVMCDHHDYEDDDNGYSNNIKREYFGGFEEEPDHLMNIVEPADSCLTSSDDWRGFKSD 240

BLAST of ClCG05G000530 vs. TAIR10
Match: AT3G61890.1 (AT3G61890.1 homeobox 12)

HSP 1 Score: 189.9 bits (481), Expect = 1.8e-48
Identity = 112/224 (50.00%), Postives = 138/224 (61.61%), Query Frame = 1

Query: 22  KKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSK 81
           KKS N++RFSEEQIKSLE IFESE+RLEPRKK+Q+A ELGL PRQVAIWFQNKRARWK+K
Sbjct: 26  KKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTK 85

Query: 82  QLERDYSVLRANYNTLASRFEALKKEKQALTIQLEKLNNLVQRSMEET-ESCRG--GL-- 141
           QLE++Y+ LRANYN LAS+FE +KKEKQ+L  +L++LN  +QR  EE    C G  GL  
Sbjct: 86  QLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKHHECCGDQGLAL 145

Query: 142 --SAETIDGKSENGHRTKYESEVKPCASVEEKSEHELEVLSNYGSGIKEAYLGLEDPQPR 201
             S E+ +GKSE   R    S +  C               +Y + IK  Y G E+    
Sbjct: 146 SSSTESHNGKSEPEGRLDQGSVL--CND------------GDYNNNIKTEYFGFEEETDH 205

Query: 202 E-------PAQGSLISTPNWSNLDSEGLFSQSNTN-GQWWDFWS 231
           E            L S+ NW   +S+ L  QS++N   WW+FWS
Sbjct: 206 ELMNIVEKADDSCLTSSENWGGFNSDSLLDQSSSNYPNWWEFWS 235

BLAST of ClCG05G000530 vs. TAIR10
Match: AT2G22430.1 (AT2G22430.1 homeobox protein 6)

HSP 1 Score: 115.2 bits (287), Expect = 5.5e-26
Identity = 69/200 (34.50%), Postives = 107/200 (53.50%), Query Frame = 1

Query: 24  SMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQL 83
           S  +RR S  Q+K+LE  FE E++LEP +K++LA ELGL PRQVA+WFQN+RARWK+KQL
Sbjct: 60  SEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 119

Query: 84  ERDYSVLRANYNTLASRFEALKKEKQALTIQLEKLNNLVQRSMEETESCRGGLSAETIDG 143
           E+DY VL+  Y++L   F++L+++ ++L  ++ KL   +     E E      +  T   
Sbjct: 120 EKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTT--- 179

Query: 144 KSENGHRTKYESEVKPCASVEEKSEHELEVLSNYGSGIKEAYLGLEDPQPREPAQGSLIS 203
             E+    K E EV     + E      + L +       ++  L D  P + A  S  +
Sbjct: 180 --ESDISVK-EEEVSLPEKITEAPSSPPQFLEHSDGLNYRSFTDLRDLLPLKAAASSFAA 239

Query: 204 TPNWS-NLDSEGLFSQSNTN 223
               S + DS  L ++ +++
Sbjct: 240 AAGSSDSSDSSALLNEESSS 253

BLAST of ClCG05G000530 vs. TAIR10
Match: AT4G40060.1 (AT4G40060.1 homeobox protein 16)

HSP 1 Score: 112.1 bits (279), Expect = 4.7e-25
Identity = 58/148 (39.19%), Postives = 87/148 (58.78%), Query Frame = 1

Query: 8   YSPPASMAEAFAMRKKSMN----RRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLH 67
           Y   A++ E ++     M     +RR   +Q+K+LE  FE E++LEP +K +LA ELGL 
Sbjct: 37  YDEDATLIEEYSGNHHHMGLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQ 96

Query: 68  PRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTIQLEKLNNLVQ 127
           PRQVA+WFQN+RARWK+KQLE+DY VL+  Y++L   F++L+++  +L  ++ K+   V 
Sbjct: 97  PRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVN 156

Query: 128 RSMEETESCRGGLSAETIDGKSENGHRT 152
              +   +      A T   K E  H+T
Sbjct: 157 GEEDNNNN-----KAITEGVKEEEVHKT 179

BLAST of ClCG05G000530 vs. TAIR10
Match: AT5G65310.1 (AT5G65310.1 homeobox protein 5)

HSP 1 Score: 111.3 bits (277), Expect = 7.9e-25
Identity = 58/138 (42.03%), Postives = 85/138 (61.59%), Query Frame = 1

Query: 27  RRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLERD 86
           +RR   EQ+K+LE  FE +++LEP +K++LA ELGL PRQVAIWFQN+RARWK+KQLERD
Sbjct: 73  KRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERD 132

Query: 87  YSVLRANYNTLASRFEALKKEKQALTIQLEKLNNLVQRSMEETESCRGGLSAETIDGKSE 146
           Y VL++N++ L    ++L+++  +L  Q+++L              +  L+ E + G  E
Sbjct: 133 YGVLKSNFDALKRNRDSLQRDNDSLLGQIKEL--------------KAKLNVEGVKGIEE 192

Query: 147 NGHRTKYESEVKPCASVE 165
           NG     E+     A+ E
Sbjct: 193 NGALKAVEANQSVMANNE 196

BLAST of ClCG05G000530 vs. NCBI nr
Match: gi|449432008|ref|XP_004133792.1| (PREDICTED: homeobox-leucine zipper protein ATHB-12 [Cucumis sativus])

HSP 1 Score: 436.0 bits (1120), Expect = 4.0e-119
Identity = 216/230 (93.91%), Postives = 222/230 (96.52%), Query Frame = 1

Query: 1   MLNDDAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL 60
           MLN+DAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL
Sbjct: 1   MLNEDAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL 60

Query: 61  GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTIQLEKLNN 120
           GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALT+QL+KLNN
Sbjct: 61  GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQLQKLNN 120

Query: 121 LVQRSMEETESCRGGLSAETIDGKSENGHRTKYESEVKPCASVEEKSEHELEVLSNYGSG 180
           LVQRSMEETESCRG LS ETIDGKSE  HRTKYESEVKPC S EEKSEHELEVLSNYGSG
Sbjct: 121 LVQRSMEETESCRGVLSIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLSNYGSG 180

Query: 181 IKEAYLGLEDPQPREPAQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 231
           +KEAY+GLEDPQ RE +QGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS
Sbjct: 181 VKEAYIGLEDPQLRESSQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 230

BLAST of ClCG05G000530 vs. NCBI nr
Match: gi|659074881|ref|XP_008437846.1| (PREDICTED: homeobox-leucine zipper protein ATHB-7 [Cucumis melo])

HSP 1 Score: 407.1 bits (1045), Expect = 2.0e-110
Identity = 206/230 (89.57%), Postives = 215/230 (93.48%), Query Frame = 1

Query: 1   MLNDDAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL 60
           MLN+DAEYSP ASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL
Sbjct: 1   MLNEDAEYSPQASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL 60

Query: 61  GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTIQLEKLNN 120
           GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQAL++QL+KLNN
Sbjct: 61  GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALSMQLQKLNN 120

Query: 121 LVQRSMEETESCRGGLSAETIDGKSENGHRTKYESEVKPCASVEEKSEHELEVLSNYGSG 180
           L+QRSMEETESCRG LS ETIDG SEN +RTKYESE KPC S EEKSEHELEVLS   SG
Sbjct: 121 LIQRSMEETESCRGVLSVETIDGTSENDNRTKYESEAKPCVSAEEKSEHELEVLS---SG 180

Query: 181 IKEAYLGLEDPQPREPAQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 231
           +KEAY+GLEDPQ REP   SLISTPNWSNLDSEGLFSQSNTNGQWW+FWS
Sbjct: 181 VKEAYIGLEDPQLREP---SLISTPNWSNLDSEGLFSQSNTNGQWWNFWS 224

BLAST of ClCG05G000530 vs. NCBI nr
Match: gi|224130632|ref|XP_002320889.1| (homeobox leucine zipper family protein [Populus trichocarpa])

HSP 1 Score: 268.5 bits (685), Expect = 1.1e-68
Identity = 142/238 (59.66%), Postives = 178/238 (74.79%), Query Frame = 1

Query: 4   DDAEYSPPASM------AEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLA 63
           D  EYSP A+       +   + +KK+  +RRFS+EQIKSLE++FESE+RLEPRKK+QLA
Sbjct: 3   DGGEYSPSATEPFSCLNSVTTSRKKKNKIKRRFSDEQIKSLETMFESETRLEPRKKMQLA 62

Query: 64  GELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTIQLEK 123
            ELGL PRQVAIWFQNKRARWKSKQLERDYS+LRANYN+LASRFE LKKEKQAL IQL+K
Sbjct: 63  RELGLQPRQVAIWFQNKRARWKSKQLERDYSMLRANYNSLASRFETLKKEKQALAIQLQK 122

Query: 124 LNNLVQRSMEETESCRGGLSAETIDGKSENGHRTKYESEVKPCASVEEKSEHELEVLSNY 183
           LN+L+++ +EE E C  G +  + +G+SENG  TK ESE KP  S+E+  EH L VLS+ 
Sbjct: 123 LNDLMKKPVEEGECCGQGAAVNSSEGESENGDATKGESETKPRLSIEQ-PEHGLGVLSDE 182

Query: 184 GSGIKEAYLGLEDPQPR-----EPAQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 231
            S IK  Y  LE+ +P      EPA+GSL S  +W ++DS+GLF QS++  QWWDFW+
Sbjct: 183 DSSIKVDYFELEE-EPNLMSMVEPAEGSLTSQEDWGSIDSDGLFDQSSSGYQWWDFWA 238

BLAST of ClCG05G000530 vs. NCBI nr
Match: gi|743827825|ref|XP_011023121.1| (PREDICTED: homeobox-leucine zipper protein ATHB-7-like [Populus euphratica])

HSP 1 Score: 265.4 bits (677), Expect = 9.3e-68
Identity = 142/240 (59.17%), Postives = 176/240 (73.33%), Query Frame = 1

Query: 4   DDAEYSPPASMAEAFAM--------RKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQ 63
           D  EYSP A+  E F+         +KK+ N+RRFS+EQIKSLES+FESE+RLEPRKK+Q
Sbjct: 3   DGGEYSPSAT--EPFSCMNGVTTSRKKKNKNKRRFSDEQIKSLESMFESETRLEPRKKMQ 62

Query: 64  LAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTIQL 123
           LA ELGL PRQVAIWFQNKRARWKSKQLERD+S+LRANYN+LASRFE LKKEKQAL +QL
Sbjct: 63  LAKELGLQPRQVAIWFQNKRARWKSKQLERDFSILRANYNSLASRFETLKKEKQALVLQL 122

Query: 124 EKLNNLVQRSMEETESCRGGLSAETIDGKSENGHRTKYESEVKPCASVEEKSEHELEVLS 183
           +K+N L+++  EE E C  G +  +I+G+SEN   T  ESE  P  S+ E+ EH L VLS
Sbjct: 123 QKINGLMKKPGEEGECCDQGPAVNSIEGRSENADTTMGESETNPRLSI-ERPEHGLGVLS 182

Query: 184 NYGSGIKEAYLGLEDPQPR-----EPAQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 231
           +  S IK  Y  LE+ +P      EPA GSL S  +W +LDS+GLF QS+++ QWWDFW+
Sbjct: 183 DEDSSIKAEYFELEE-EPNLISMVEPADGSLTSQEDWGSLDSDGLFDQSSSDYQWWDFWA 238

BLAST of ClCG05G000530 vs. NCBI nr
Match: gi|224068066|ref|XP_002302659.1| (homeobox leucine zipper family protein [Populus trichocarpa])

HSP 1 Score: 264.6 bits (675), Expect = 1.6e-67
Identity = 143/240 (59.58%), Postives = 176/240 (73.33%), Query Frame = 1

Query: 4   DDAEYSPPASMAEAFAM--------RKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQ 63
           D  EYSP A+  E F+         +KK+ N+RRFS+EQIKSLES+FESE+RLEPRKK+Q
Sbjct: 3   DGGEYSPSAT--EPFSCMNGVTTSRKKKNKNKRRFSDEQIKSLESMFESETRLEPRKKMQ 62

Query: 64  LAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTIQL 123
           LA ELGL PRQVAIWFQNKRARWKSKQLERD+S+LRANYN+LASRFE LKKEKQAL IQL
Sbjct: 63  LAKELGLQPRQVAIWFQNKRARWKSKQLERDFSILRANYNSLASRFETLKKEKQALVIQL 122

Query: 124 EKLNNLVQRSMEETESCRGGLSAETIDGKSENGHRTKYESEVKPCASVEEKSEHELEVLS 183
           +K+N+L+++  EE E C  G +  +I+GKSEN   T  ESE  P  S+ E+ EH L VLS
Sbjct: 123 QKINDLMKKPGEEGECCGQGPAVNSIEGKSENADTTMGESETNPRLSI-ERPEHGLGVLS 182

Query: 184 NYGSGIKEAYLGLEDPQPR-----EPAQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 231
           +  S IK  Y  LE+ +P      EPA GSL S  +W +LDS+ LF QS+++ QWWDFW+
Sbjct: 183 DEDSSIKAEYFELEE-EPNLISMVEPADGSLTSQEDWGSLDSDRLFDQSSSDYQWWDFWA 238

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ATHB7_ARATH9.7e-4945.95Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana GN=ATHB-7 PE=1 SV... [more]
ATB12_ARATH3.1e-4750.00Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana GN=ATHB-12 PE=1 ... [more]
HOX6_ORYSI1.1e-3170.10Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica GN=HOX6 PE=2 ... [more]
HOX6_ORYSJ1.1e-3170.10Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica GN=HOX6 PE=... [more]
HOX22_ORYSJ7.7e-3056.10Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. japonica GN=HOX22 P... [more]
Match NameE-valueIdentityDescription
A0A0A0L317_CUCSA2.8e-11993.91Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119240 PE=4 SV=1[more]
B9I924_POPTR7.7e-6959.66Homeobox leucine zipper family protein OS=Populus trichocarpa GN=POPTR_0014s0986... [more]
B9GR61_POPTR1.1e-6759.58Homeobox leucine zipper family protein OS=Populus trichocarpa GN=POPTR_0002s1768... [more]
A0A096YDU1_ROSHC9.7e-6459.27Homeobox-leucine zipper protein 1 OS=Rosa hybrid cultivar GN=HB1 PE=2 SV=1[more]
A0A067JWT5_JATCU1.1e-6256.45Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14207 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G46680.15.5e-5045.95 homeobox 7[more]
AT3G61890.11.8e-4850.00 homeobox 12[more]
AT2G22430.15.5e-2634.50 homeobox protein 6[more]
AT4G40060.14.7e-2539.19 homeobox protein 16[more]
AT5G65310.17.9e-2542.03 homeobox protein 5[more]
Match NameE-valueIdentityDescription
gi|449432008|ref|XP_004133792.1|4.0e-11993.91PREDICTED: homeobox-leucine zipper protein ATHB-12 [Cucumis sativus][more]
gi|659074881|ref|XP_008437846.1|2.0e-11089.57PREDICTED: homeobox-leucine zipper protein ATHB-7 [Cucumis melo][more]
gi|224130632|ref|XP_002320889.1|1.1e-6859.66homeobox leucine zipper family protein [Populus trichocarpa][more]
gi|743827825|ref|XP_011023121.1|9.3e-6859.17PREDICTED: homeobox-leucine zipper protein ATHB-7-like [Populus euphratica][more]
gi|224068066|ref|XP_002302659.1|1.6e-6759.58homeobox leucine zipper family protein [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000047HTH_motif
IPR001356Homeobox_dom
IPR003106Leu_zip_homeo
IPR009057Homeobox-like_sf
IPR017970Homeobox_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G000530.1ClCG05G000530.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000047Helix-turn-helix motifPRINTSPR00031HTHREPRESSRcoord: 52..61
score: 3.0E-5coord: 61..77
score: 3.
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 26..79
score: 3.3
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 23..85
score: 1.7
IPR001356Homeobox domainPROFILEPS50071HOMEOBOX_2coord: 21..81
score: 17
IPR003106Leucine zipper, homeobox-associatedPFAMPF02183HALZcoord: 81..123
score: 1.9
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 26..88
score: 1.1
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 11..83
score: 5.01
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 56..79
scor
NoneNo IPR availableunknownCoilCoilcoord: 94..128
scor
NoneNo IPR availablePANTHERPTHR24326FAMILY NOT NAMEDcoord: 22..130
score: 5.0
NoneNo IPR availablePANTHERPTHR24326:SF122HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-12-RELATEDcoord: 22..130
score: 5.0