Csa3G119240 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G119240
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionHomeobox-leucine zipper protein; contains IPR003106 (Leucine zipper, homeobox-associated), IPR009057 (Homeodomain-like)
LocationChr3 : 6603719 .. 6604915 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCATTCACTCTCGTAACACCTGGTTTAGGAATAAAGCCTTGTGATAACCAAACTGAATCTTAAGCAGCATGCTAAATGAAGATGCTGAATATTCTCCCCCAGCATCCATGGCAGAGGCTTTTGCCATGAGAAAGAAGAGTATGAACAGAAGAAGGTTTAGCGAAGAACAAATCAAATCACTTGAGTCTATTTTCGAATCTGAGTCTAGGCTTGAGCCCAGAAAGAAGTTGCAGCTGGCGGGAGAGCTGGGTTTGCATCCACGCCAGGTTGCAATATGGTTTCAGAACAAGAGAGCTAGATGGAAGTCAAAGCAACTTGAACGAGACTACAGTGTTTTACGAGCTAATTACAATACTCTAGCTTCCCGGTTTGAAGCTCTTAAGAAGGAAAAACAAGCCTTGACTATGCAGGTATGTGTTCTTTATTTCTCTAGGAAAAGACCCGCTGTTTCTTGAATTTTGCTAATCATTGTTGTTTCTTTTATTTGGGCAGTTGCAGAAGCTAAATAATCTGGTACAGCGGTCCATGGAGGAAACTGAGAGCTGCAGGGGAGTTCTCTCCATAGAAACCATTGATGGCAAGTCTGAAATTGACCACAGAACTAAGTACGAGTCTGAAGTAAAACCTTGTTTGTCAGCTGAAGAGAAATCAGAACATGAATTAGAGGTTCTTTCCAACTACGGTAGTGGCGTAAAGGAAGCCTATATTGGATTAGAGGATCCCCAGCTCAGGGAATCTTCTCAAGGTTCCCTGATATCAACACCAAATTGGAGTAATCTAGACTCTGAAGGTCTTTTCAGTCAGTCTAATACCAATGGCCAGTGGTGGGACTTCTGGTCGTGAAAAGTCGAACCACCTAAAGAAACTATAGAGGATTTGTAAACAAATAAAATTCCAACCTTTTAAATAGATCATCCTAGCAATGATTTTGGCTCACAGGACGAGGAAGAGTTAAGAGCACAACGACTTCTATCAAGGACAGCAATGACTGAAATGTGGTGGTTTCAAGCACTGATGCTCCAAATTCACCACAATTTCAGATGGAATTCAGAAGAATTAGGTGAGCAACTCTAGGAAATACCGCCTGCAAAGGGTGTTGGCTTGGAAAACTGAAACAGTATGCTCGTATGCAGACAGGGTGCAGTTTGGAATGTTTTCAGTGTGTGAGAGTTCTTCTTCTTCTGTTTTTTCCCC

mRNA sequence

ATGCTAAATGAAGATGCTGAATATTCTCCCCCAGCATCCATGGCAGAGGCTTTTGCCATGAGAAAGAAGAGTATGAACAGAAGAAGGTTTAGCGAAGAACAAATCAAATCACTTGAGTCTATTTTCGAATCTGAGTCTAGGCTTGAGCCCAGAAAGAAGTTGCAGCTGGCGGGAGAGCTGGGTTTGCATCCACGCCAGGTTGCAATATGGTTTCAGAACAAGAGAGCTAGATGGAAGTCAAAGCAACTTGAACGAGACTACAGTGTTTTACGAGCTAATTACAATACTCTAGCTTCCCGGTTTGAAGCTCTTAAGAAGGAAAAACAAGCCTTGACTATGCAGTTGCAGAAGCTAAATAATCTGGTACAGCGGTCCATGGAGGAAACTGAGAGCTGCAGGGGAGTTCTCTCCATAGAAACCATTGATGGCAAGTCTGAAATTGACCACAGAACTAAGTACGAGTCTGAAGTAAAACCTTGTTTGTCAGCTGAAGAGAAATCAGAACATGAATTAGAGGTTCTTTCCAACTACGGTAGTGGCGTAAAGGAAGCCTATATTGGATTAGAGGATCCCCAGCTCAGGGAATCTTCTCAAGGTTCCCTGATATCAACACCAAATTGGAGTAATCTAGACTCTGAAGGTCTTTTCAGTCAGTCTAATACCAATGGCCAGTGGTGGGACTTCTGGTCGTGA

Coding sequence (CDS)

ATGCTAAATGAAGATGCTGAATATTCTCCCCCAGCATCCATGGCAGAGGCTTTTGCCATGAGAAAGAAGAGTATGAACAGAAGAAGGTTTAGCGAAGAACAAATCAAATCACTTGAGTCTATTTTCGAATCTGAGTCTAGGCTTGAGCCCAGAAAGAAGTTGCAGCTGGCGGGAGAGCTGGGTTTGCATCCACGCCAGGTTGCAATATGGTTTCAGAACAAGAGAGCTAGATGGAAGTCAAAGCAACTTGAACGAGACTACAGTGTTTTACGAGCTAATTACAATACTCTAGCTTCCCGGTTTGAAGCTCTTAAGAAGGAAAAACAAGCCTTGACTATGCAGTTGCAGAAGCTAAATAATCTGGTACAGCGGTCCATGGAGGAAACTGAGAGCTGCAGGGGAGTTCTCTCCATAGAAACCATTGATGGCAAGTCTGAAATTGACCACAGAACTAAGTACGAGTCTGAAGTAAAACCTTGTTTGTCAGCTGAAGAGAAATCAGAACATGAATTAGAGGTTCTTTCCAACTACGGTAGTGGCGTAAAGGAAGCCTATATTGGATTAGAGGATCCCCAGCTCAGGGAATCTTCTCAAGGTTCCCTGATATCAACACCAAATTGGAGTAATCTAGACTCTGAAGGTCTTTTCAGTCAGTCTAATACCAATGGCCAGTGGTGGGACTTCTGGTCGTGA

Protein sequence

MLNEDAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQLQKLNNLVQRSMEETESCRGVLSIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLSNYGSGVKEAYIGLEDPQLRESSQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS*
Homology
[Close]
BLAST of Csa3G119240 vs. Swiss-Prot
Match: ATB12_ARATH (Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana GN=ATHB-12 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 8.2e-48
Identity = 112/227 (49.34%), Postives = 142/227 (62.56%), Query Frame = 1 

Query: 22  KKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSK 81
           KKS N++RFSEEQIKSLE IFESE+RLEPRKK+Q+A ELGL PRQVAIWFQNKRARWK+K
Sbjct: 26  KKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTK 85

Query: 82  QLERDYSVLRANYNTLASRFEALKKEKQALTMQLQKLNNLVQRSMEET--ESC--RGVL- 141
           QLE++Y+ LRANYN LAS+FE +KKEKQ+L  +LQ+LN  +QR  EE   E C  +G+  
Sbjct: 86  QLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKHHECCGDQGLAL 145

Query: 142 --SIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLSN---YGSGVKEAYIGLEDP 201
             S E+ +GKSE + R    S                 VL N   Y + +K  Y G E+ 
Sbjct: 146 SSSTESHNGKSEPEGRLDQGS-----------------VLCNDGDYNNNIKTEYFGFEEE 205

Query: 202 Q-------LRESSQGSLISTPNWSNLDSEGLFSQSNTN-GQWWDFWS 231
                   + ++    L S+ NW   +S+ L  QS++N   WW+FWS
Sbjct: 206 TDHELMNIVEKADDSCLTSSENWGGFNSDSLLDQSSSNYPNWWEFWS 235

[Close]
BLAST of Csa3G119240 vs. Swiss-Prot
Match: ATHB7_ARATH (Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana GN=ATHB-7 PE=1 SV=2)

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-47
Identity = 117/258 (45.35%), Postives = 153/258 (59.30%), Query Frame = 1 

Query: 2   LNEDAEYSPPASMAEAFAMRKKSM-------NRRRFSEEQIKSLESIFESESRLEPRKKL 61
           + E  EYSP    AE F   KK         N+RRFS+EQIKSLE +FESE+RLEPRKK+
Sbjct: 1   MTEGGEYSPAMMSAEPFLTMKKMKKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKV 60

Query: 62  QLAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQ 121
           QLA ELGL PRQVAIWFQNKRARWKSKQLE +Y++LR NY+ LAS+FE+LKKEKQAL  +
Sbjct: 61  QLARELGLQPRQVAIWFQNKRARWKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSE 120

Query: 122 LQKLNNLVQ-RSMEETESCRG---VLSIETIDGKSE-IDHRTKYESEVKPCLSAEEK--- 181
           LQ+L    Q ++ EE   C G   V+++ +   +SE  ++R +   EV+P +  ++    
Sbjct: 121 LQRLKEATQKKTQEEERQCSGDQAVVALSSTHHESENEENRRRKPEEVRPEMEMKDDKGH 180

Query: 182 -----SEHELEVLSN-YGSGVKEAYIG--LEDP----QLRESSQGSLISTPNWSNL--DS 231
                  H+ E   N Y + +K  Y G   E+P     + E +   L S+ +W     D+
Sbjct: 181 HGVMCDHHDYEDDDNGYSNNIKREYFGGFEEEPDHLMNIVEPADSCLTSSDDWRGFKSDT 240

[Close]
BLAST of Csa3G119240 vs. Swiss-Prot
Match: HOX6_ORYSI (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica GN=HOX6 PE=2 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-31
Identity = 67/97 (69.07%), Postives = 81/97 (83.51%), Query Frame = 1 

Query: 27  RRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLERD 86
           ++RFSEEQIKSLES+F ++++LEPR+KLQLA ELGL PRQVAIWFQNKRARWKSKQLER+
Sbjct: 31  KKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERE 90

Query: 87  YSVLRANYNTLASRFEALKKEKQALTMQLQKLNNLVQ 124
           YS LR +Y+ L   +E+LKKEK AL  QL+KL  ++Q
Sbjct: 91  YSALRDDYDALLCSYESLKKEKLALIKQLEKLAEMLQ 127

[Close]
BLAST of Csa3G119240 vs. Swiss-Prot
Match: HOX6_ORYSJ (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica GN=HOX6 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-31
Identity = 67/97 (69.07%), Postives = 81/97 (83.51%), Query Frame = 1 

Query: 27  RRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLERD 86
           ++RFSEEQIKSLES+F ++++LEPR+KLQLA ELGL PRQVAIWFQNKRARWKSKQLER+
Sbjct: 31  KKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERE 90

Query: 87  YSVLRANYNTLASRFEALKKEKQALTMQLQKLNNLVQ 124
           YS LR +Y+ L   +E+LKKEK AL  QL+KL  ++Q
Sbjct: 91  YSALRDDYDALLCSYESLKKEKLALIKQLEKLAEMLQ 127

[Close]
BLAST of Csa3G119240 vs. Swiss-Prot
Match: HOX22_ORYSJ (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. japonica GN=HOX22 PE=2 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 6.6e-29
Identity = 72/151 (47.68%), Postives = 92/151 (60.93%), Query Frame = 1 

Query: 27  RRRFSEEQIKSLESIFESE-SRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLER 86
           +RRF+EEQI+SLES+F +  ++LEPR+K +LA ELGL PRQVAIWFQNKRARW+SKQLE 
Sbjct: 74  KRRFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEH 133

Query: 87  DYSVLRANYNTLASRFEALKKEKQALTMQLQKLNNLVQRSME------------ETESCR 146
           DY+ LR+ Y+ L SR E+LK+EK ALT+QL +L   ++   E             + SC 
Sbjct: 134 DYAALRSKYDALHSRVESLKQEKLALTVQLHELRERLREREERSGNGGAATTAASSSSCN 193

Query: 147 GVLSIETIDGKSEIDHRTKYESEVKPCLSAE 165
           G        G  E+D      +    CL  E
Sbjct: 194 G-------SGSEEVDDDDDKRNAAAGCLDLE 217

[Close]
BLAST of Csa3G119240 vs. TrEMBL
Match: A0A0A0L317_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119240 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 1.4e-126
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1 

Query: 1   MLNEDAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL 60
           MLNEDAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL
Sbjct: 1   MLNEDAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL 60

Query: 61  GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQLQKLNN 120
           GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQLQKLNN
Sbjct: 61  GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQLQKLNN 120

Query: 121 LVQRSMEETESCRGVLSIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLSNYGSG 180
           LVQRSMEETESCRGVLSIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLSNYGSG
Sbjct: 121 LVQRSMEETESCRGVLSIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLSNYGSG 180

Query: 181 VKEAYIGLEDPQLRESSQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 231
           VKEAYIGLEDPQLRESSQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS
Sbjct: 181 VKEAYIGLEDPQLRESSQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 230

[Close]
BLAST of Csa3G119240 vs. TrEMBL
Match: B9I924_POPTR (Homeobox leucine zipper family protein OS=Populus trichocarpa GN=POPTR_0014s09860g PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 6.8e-65
Identity = 137/237 (57.81%), Postives = 175/237 (73.84%), Query Frame = 1 

Query: 4   EDAEYSPPASM------AEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLA 63
           +  EYSP A+       +   + +KK+  +RRFS+EQIKSLE++FESE+RLEPRKK+QLA
Sbjct: 3   DGGEYSPSATEPFSCLNSVTTSRKKKNKIKRRFSDEQIKSLETMFESETRLEPRKKMQLA 62

Query: 64  GELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQLQK 123
            ELGL PRQVAIWFQNKRARWKSKQLERDYS+LRANYN+LASRFE LKKEKQAL +QLQK
Sbjct: 63  RELGLQPRQVAIWFQNKRARWKSKQLERDYSMLRANYNSLASRFETLKKEKQALAIQLQK 122

Query: 124 LNNLVQRSMEETESCRGVLSIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLSNY 183
           LN+L+++ +EE E C    ++ + +G+SE    TK ESE KP LS E+  EH L VLS+ 
Sbjct: 123 LNDLMKKPVEEGECCGQGAAVNSSEGESENGDATKGESETKPRLSIEQ-PEHGLGVLSDE 182

Query: 184 GSGVKEAYIGL-EDPQLR---ESSQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 231
            S +K  Y  L E+P L    E ++GSL S  +W ++DS+GLF QS++  QWWDFW+
Sbjct: 183 DSSIKVDYFELEEEPNLMSMVEPAEGSLTSQEDWGSIDSDGLFDQSSSGYQWWDFWA 238

[Close]
BLAST of Csa3G119240 vs. TrEMBL
Match: B9GR61_POPTR (Homeobox leucine zipper family protein OS=Populus trichocarpa GN=POPTR_0002s17680g PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.4e-64
Identity = 137/239 (57.32%), Postives = 173/239 (72.38%), Query Frame = 1 

Query: 4   EDAEYSPPASMAEAFAM--------RKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQ 63
           +  EYSP A+  E F+         +KK+ N+RRFS+EQIKSLES+FESE+RLEPRKK+Q
Sbjct: 3   DGGEYSPSAT--EPFSCMNGVTTSRKKKNKNKRRFSDEQIKSLESMFESETRLEPRKKMQ 62

Query: 64  LAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQL 123
           LA ELGL PRQVAIWFQNKRARWKSKQLERD+S+LRANYN+LASRFE LKKEKQAL +QL
Sbjct: 63  LAKELGLQPRQVAIWFQNKRARWKSKQLERDFSILRANYNSLASRFETLKKEKQALVIQL 122

Query: 124 QKLNNLVQRSMEETESCRGVLSIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLS 183
           QK+N+L+++  EE E C    ++ +I+GKSE    T  ESE  P LS  E+ EH L VLS
Sbjct: 123 QKINDLMKKPGEEGECCGQGPAVNSIEGKSENADTTMGESETNPRLSI-ERPEHGLGVLS 182

Query: 184 NYGSGVKEAYIGLEDP----QLRESSQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 231
           +  S +K  Y  LE+      + E + GSL S  +W +LDS+ LF QS+++ QWWDFW+
Sbjct: 183 DEDSSIKAEYFELEEEPNLISMVEPADGSLTSQEDWGSLDSDRLFDQSSSDYQWWDFWA 238

[Close]
BLAST of Csa3G119240 vs. TrEMBL
Match: A0A096YDU1_ROSHC (Homeobox-leucine zipper protein 1 OS=Rosa hybrid cultivar GN=HB1 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 6.3e-63
Identity = 146/243 (60.08%), Postives = 171/243 (70.37%), Query Frame = 1 

Query: 8   YSPPASMAEAFA-----------MRKKSM--NRRRFSEEQIKSLESIFESESRLEPRKKL 67
           YSP    AEAF+           ++KKS   N++RFS+EQI+SLESIFESESRLEPRKKL
Sbjct: 9   YSPSPEEAEAFSYMNDSLGAGSSLKKKSSKNNKKRFSDEQIRSLESIFESESRLEPRKKL 68

Query: 68  QLAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQ 127
           QLA ELGL PRQVAIWFQNKRARWKSKQLERDYS+LRANYN LASRFEALKKEKQAL  Q
Sbjct: 69  QLAKELGLQPRQVAIWFQNKRARWKSKQLERDYSILRANYNNLASRFEALKKEKQALVTQ 128

Query: 128 LQKLNNLVQRSMEETESCRGVLSIETIDGKSEI-DHRTKYESEVKPCLSAE-EKSEHELE 187
           LQKLN+ +QR  EE  +        +IDG+S+  D  T+ ESE KP      EKSEH L 
Sbjct: 129 LQKLNDKMQRPKEERNN--------SIDGESDNGDDATRSESEGKPNYQMSLEKSEHRLR 188

Query: 188 VLSNYGSGVKEAYIGL-EDPQL---RESSQGSLISTPNWSNLDSE-GLFSQSNTNGQWWD 231
           V+S+  S +K  Y GL E+P L    ES+ GSL S  +W  L+S+ GLF QS ++ QWWD
Sbjct: 189 VMSDDDSSIKAEYFGLEEEPNLVNFVESADGSLTSPEDWGRLNSDGGLFDQSTSDYQWWD 243

[Close]
BLAST of Csa3G119240 vs. TrEMBL
Match: A0A067JWT5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14207 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.1e-62
Identity = 138/248 (55.65%), Postives = 172/248 (69.35%), Query Frame = 1 

Query: 1   MLNEDAEYSPPASMAEAF----------AMRKKSMNRRRFSEEQIKSLESIFESESRLEP 60
           M +E+  YSP AS  + F          + RKK+ N+RRFS+EQIKSLE++FESESRLEP
Sbjct: 54  MFDEEEVYSPCASAEDLFTAMDTALSTTSRRKKTKNKRRFSDEQIKSLETMFESESRLEP 113

Query: 61  RKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQA 120
           RKKLQLA ELGL PRQVAIWFQNKRARWKSKQLERDYSVLRANYN LASRFE LKKEKQA
Sbjct: 114 RKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYSVLRANYNNLASRFETLKKEKQA 173

Query: 121 LTMQLQKLNNLVQRSMEETESCRGVLSIETIDGKSEID-HRTKYESEVKPCLSAEEKSEH 180
           L +QLQKLN L+++  EE E C          G+ E   + ++ ESE K  +S+ E+S +
Sbjct: 174 LAIQLQKLNELIEKPREEGECC----------GEQETGVNSSEGESEAKGVISSFERSRN 233

Query: 181 ELEVLSNYGSGVKEAYIGLEDP------QLRESSQGSLISTPNWSNLDSEGLFSQSNT-N 231
            L V S+  S +K  Y GLE+        + E++ GSL S  +W +L+S+GLF QSN+ +
Sbjct: 234 GLGVASDEDSSIKVEYFGLEEEPDNNLISMVEAADGSLTSQEDWRSLESDGLFDQSNSGS 291

[Close]
BLAST of Csa3G119240 vs. TAIR10
Match: AT3G61890.1 (AT3G61890.1 homeobox 12)

HSP 1 Score: 191.8 bits (486), Expect = 4.6e-49
Identity = 112/227 (49.34%), Postives = 142/227 (62.56%), Query Frame = 1 

Query: 22  KKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSK 81
           KKS N++RFSEEQIKSLE IFESE+RLEPRKK+Q+A ELGL PRQVAIWFQNKRARWK+K
Sbjct: 26  KKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTK 85

Query: 82  QLERDYSVLRANYNTLASRFEALKKEKQALTMQLQKLNNLVQRSMEET--ESC--RGVL- 141
           QLE++Y+ LRANYN LAS+FE +KKEKQ+L  +LQ+LN  +QR  EE   E C  +G+  
Sbjct: 86  QLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKHHECCGDQGLAL 145

Query: 142 --SIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLSN---YGSGVKEAYIGLEDP 201
             S E+ +GKSE + R    S                 VL N   Y + +K  Y G E+ 
Sbjct: 146 SSSTESHNGKSEPEGRLDQGS-----------------VLCNDGDYNNNIKTEYFGFEEE 205

Query: 202 Q-------LRESSQGSLISTPNWSNLDSEGLFSQSNTN-GQWWDFWS 231
                   + ++    L S+ NW   +S+ L  QS++N   WW+FWS
Sbjct: 206 TDHELMNIVEKADDSCLTSSENWGGFNSDSLLDQSSSNYPNWWEFWS 235

[Close]
BLAST of Csa3G119240 vs. TAIR10
Match: AT2G46680.1 (AT2G46680.1 homeobox 7)

HSP 1 Score: 191.4 bits (485), Expect = 6.1e-49
Identity = 117/258 (45.35%), Postives = 153/258 (59.30%), Query Frame = 1 

Query: 2   LNEDAEYSPPASMAEAFAMRKKSM-------NRRRFSEEQIKSLESIFESESRLEPRKKL 61
           + E  EYSP    AE F   KK         N+RRFS+EQIKSLE +FESE+RLEPRKK+
Sbjct: 1   MTEGGEYSPAMMSAEPFLTMKKMKKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKV 60

Query: 62  QLAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQ 121
           QLA ELGL PRQVAIWFQNKRARWKSKQLE +Y++LR NY+ LAS+FE+LKKEKQAL  +
Sbjct: 61  QLARELGLQPRQVAIWFQNKRARWKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSE 120

Query: 122 LQKLNNLVQ-RSMEETESCRG---VLSIETIDGKSE-IDHRTKYESEVKPCLSAEEK--- 181
           LQ+L    Q ++ EE   C G   V+++ +   +SE  ++R +   EV+P +  ++    
Sbjct: 121 LQRLKEATQKKTQEEERQCSGDQAVVALSSTHHESENEENRRRKPEEVRPEMEMKDDKGH 180

Query: 182 -----SEHELEVLSN-YGSGVKEAYIG--LEDP----QLRESSQGSLISTPNWSNL--DS 231
                  H+ E   N Y + +K  Y G   E+P     + E +   L S+ +W     D+
Sbjct: 181 HGVMCDHHDYEDDDNGYSNNIKREYFGGFEEEPDHLMNIVEPADSCLTSSDDWRGFKSDT 240

[Close]
BLAST of Csa3G119240 vs. TAIR10
Match: AT2G22430.1 (AT2G22430.1 homeobox protein 6)

HSP 1 Score: 115.2 bits (287), Expect = 5.5e-26
Identity = 57/126 (45.24%), Postives = 82/126 (65.08%), Query Frame = 1 

Query: 24  SMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQL 83
           S  +RR S  Q+K+LE  FE E++LEP +K++LA ELGL PRQVA+WFQN+RARWK+KQL
Sbjct: 60  SEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 119

Query: 84  ERDYSVLRANYNTLASRFEALKKEKQALTMQLQKLNNLVQ---RSMEETESCRGVLSIET 143
           E+DY VL+  Y++L   F++L+++ ++L  ++ KL   +       EE E+   V +   
Sbjct: 120 EKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESD 179

Query: 144 IDGKSE 147
           I  K E
Sbjct: 180 ISVKEE 185

[Close]
BLAST of Csa3G119240 vs. TAIR10
Match: AT5G65310.1 (AT5G65310.1 homeobox protein 5)

HSP 1 Score: 112.5 bits (280), Expect = 3.6e-25
Identity = 55/125 (44.00%), Postives = 86/125 (68.80%), Query Frame = 1 

Query: 27  RRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLERD 86
           +RR   EQ+K+LE  FE +++LEP +K++LA ELGL PRQVAIWFQN+RARWK+KQLERD
Sbjct: 73  KRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERD 132

Query: 87  YSVLRANYNTLASRFEALKKEKQALTMQLQ----KLNNLVQRSMEETESCRGVLSIETID 146
           Y VL++N++ L    ++L+++  +L  Q++    KLN    + +EE  + + V + +++ 
Sbjct: 133 YGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVEGVKGIEENGALKAVEANQSVM 192

Query: 147 GKSEI 148
             +E+
Sbjct: 193 ANNEV 197

[Close]
BLAST of Csa3G119240 vs. TAIR10
Match: AT4G40060.1 (AT4G40060.1 homeobox protein 16)

HSP 1 Score: 111.7 bits (278), Expect = 6.1e-25
Identity = 51/115 (44.35%), Postives = 77/115 (66.96%), Query Frame = 1 

Query: 8   YSPPASMAEAFAMRKKSMN----RRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLH 67
           Y   A++ E ++     M     +RR   +Q+K+LE  FE E++LEP +K +LA ELGL 
Sbjct: 37  YDEDATLIEEYSGNHHHMGLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQ 96

Query: 68  PRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQLQKL 119
           PRQVA+WFQN+RARWK+KQLE+DY VL+  Y++L   F++L+++  +L  ++ K+
Sbjct: 97  PRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKI 151

[Close]
BLAST of Csa3G119240 vs. NCBI nr
Match: gi|449432008|ref|XP_004133792.1| (PREDICTED: homeobox-leucine zipper protein ATHB-12 [Cucumis sativus])

HSP 1 Score: 460.3 bits (1183), Expect = 2.0e-126
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1 

Query: 1   MLNEDAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL 60
           MLNEDAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL
Sbjct: 1   MLNEDAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL 60

Query: 61  GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQLQKLNN 120
           GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQLQKLNN
Sbjct: 61  GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQLQKLNN 120

Query: 121 LVQRSMEETESCRGVLSIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLSNYGSG 180
           LVQRSMEETESCRGVLSIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLSNYGSG
Sbjct: 121 LVQRSMEETESCRGVLSIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLSNYGSG 180

Query: 181 VKEAYIGLEDPQLRESSQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 231
           VKEAYIGLEDPQLRESSQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS
Sbjct: 181 VKEAYIGLEDPQLRESSQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 230

[Close]
BLAST of Csa3G119240 vs. NCBI nr
Match: gi|659074881|ref|XP_008437846.1| (PREDICTED: homeobox-leucine zipper protein ATHB-7 [Cucumis melo])

HSP 1 Score: 416.8 bits (1070), Expect = 2.5e-113
Identity = 213/230 (92.61%), Postives = 219/230 (95.22%), Query Frame = 1 

Query: 1   MLNEDAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL 60
           MLNEDAEYSP ASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL
Sbjct: 1   MLNEDAEYSPQASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGEL 60

Query: 61  GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQLQKLNN 120
           GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQAL+MQLQKLNN
Sbjct: 61  GLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALSMQLQKLNN 120

Query: 121 LVQRSMEETESCRGVLSIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLSNYGSG 180
           L+QRSMEETESCRGVLS+ETIDG SE D+RTKYESE KPC+SAEEKSEHELEVLS   SG
Sbjct: 121 LIQRSMEETESCRGVLSVETIDGTSENDNRTKYESEAKPCVSAEEKSEHELEVLS---SG 180

Query: 181 VKEAYIGLEDPQLRESSQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 231
           VKEAYIGLEDPQLRE    SLISTPNWSNLDSEGLFSQSNTNGQWW+FWS
Sbjct: 181 VKEAYIGLEDPQLREP---SLISTPNWSNLDSEGLFSQSNTNGQWWNFWS 224

[Close]
BLAST of Csa3G119240 vs. NCBI nr
Match: gi|224130632|ref|XP_002320889.1| (homeobox leucine zipper family protein [Populus trichocarpa])

HSP 1 Score: 255.4 bits (651), Expect = 9.7e-65
Identity = 137/237 (57.81%), Postives = 175/237 (73.84%), Query Frame = 1 

Query: 4   EDAEYSPPASM------AEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLA 63
           +  EYSP A+       +   + +KK+  +RRFS+EQIKSLE++FESE+RLEPRKK+QLA
Sbjct: 3   DGGEYSPSATEPFSCLNSVTTSRKKKNKIKRRFSDEQIKSLETMFESETRLEPRKKMQLA 62

Query: 64  GELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQLQK 123
            ELGL PRQVAIWFQNKRARWKSKQLERDYS+LRANYN+LASRFE LKKEKQAL +QLQK
Sbjct: 63  RELGLQPRQVAIWFQNKRARWKSKQLERDYSMLRANYNSLASRFETLKKEKQALAIQLQK 122

Query: 124 LNNLVQRSMEETESCRGVLSIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLSNY 183
           LN+L+++ +EE E C    ++ + +G+SE    TK ESE KP LS E+  EH L VLS+ 
Sbjct: 123 LNDLMKKPVEEGECCGQGAAVNSSEGESENGDATKGESETKPRLSIEQ-PEHGLGVLSDE 182

Query: 184 GSGVKEAYIGL-EDPQLR---ESSQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 231
            S +K  Y  L E+P L    E ++GSL S  +W ++DS+GLF QS++  QWWDFW+
Sbjct: 183 DSSIKVDYFELEEEPNLMSMVEPAEGSLTSQEDWGSIDSDGLFDQSSSGYQWWDFWA 238

[Close]
BLAST of Csa3G119240 vs. NCBI nr
Match: gi|743827825|ref|XP_011023121.1| (PREDICTED: homeobox-leucine zipper protein ATHB-7-like [Populus euphratica])

HSP 1 Score: 255.0 bits (650), Expect = 1.3e-64
Identity = 137/239 (57.32%), Postives = 173/239 (72.38%), Query Frame = 1 

Query: 4   EDAEYSPPASMAEAFAM--------RKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQ 63
           +  EYSP A+  E F+         +KK+ N+RRFS+EQIKSLES+FESE+RLEPRKK+Q
Sbjct: 3   DGGEYSPSAT--EPFSCMNGVTTSRKKKNKNKRRFSDEQIKSLESMFESETRLEPRKKMQ 62

Query: 64  LAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQL 123
           LA ELGL PRQVAIWFQNKRARWKSKQLERD+S+LRANYN+LASRFE LKKEKQAL +QL
Sbjct: 63  LAKELGLQPRQVAIWFQNKRARWKSKQLERDFSILRANYNSLASRFETLKKEKQALVLQL 122

Query: 124 QKLNNLVQRSMEETESCRGVLSIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLS 183
           QK+N L+++  EE E C    ++ +I+G+SE    T  ESE  P LS  E+ EH L VLS
Sbjct: 123 QKINGLMKKPGEEGECCDQGPAVNSIEGRSENADTTMGESETNPRLSI-ERPEHGLGVLS 182

Query: 184 NYGSGVKEAYIGLEDP----QLRESSQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 231
           +  S +K  Y  LE+      + E + GSL S  +W +LDS+GLF QS+++ QWWDFW+
Sbjct: 183 DEDSSIKAEYFELEEEPNLISMVEPADGSLTSQEDWGSLDSDGLFDQSSSDYQWWDFWA 238

[Close]
BLAST of Csa3G119240 vs. NCBI nr
Match: gi|224068066|ref|XP_002302659.1| (homeobox leucine zipper family protein [Populus trichocarpa])

HSP 1 Score: 253.1 bits (645), Expect = 4.8e-64
Identity = 137/239 (57.32%), Postives = 173/239 (72.38%), Query Frame = 1 

Query: 4   EDAEYSPPASMAEAFAM--------RKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQ 63
           +  EYSP A+  E F+         +KK+ N+RRFS+EQIKSLES+FESE+RLEPRKK+Q
Sbjct: 3   DGGEYSPSAT--EPFSCMNGVTTSRKKKNKNKRRFSDEQIKSLESMFESETRLEPRKKMQ 62

Query: 64  LAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTMQL 123
           LA ELGL PRQVAIWFQNKRARWKSKQLERD+S+LRANYN+LASRFE LKKEKQAL +QL
Sbjct: 63  LAKELGLQPRQVAIWFQNKRARWKSKQLERDFSILRANYNSLASRFETLKKEKQALVIQL 122

Query: 124 QKLNNLVQRSMEETESCRGVLSIETIDGKSEIDHRTKYESEVKPCLSAEEKSEHELEVLS 183
           QK+N+L+++  EE E C    ++ +I+GKSE    T  ESE  P LS  E+ EH L VLS
Sbjct: 123 QKINDLMKKPGEEGECCGQGPAVNSIEGKSENADTTMGESETNPRLSI-ERPEHGLGVLS 182

Query: 184 NYGSGVKEAYIGLEDP----QLRESSQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS 231
           +  S +K  Y  LE+      + E + GSL S  +W +LDS+ LF QS+++ QWWDFW+
Sbjct: 183 DEDSSIKAEYFELEEEPNLISMVEPADGSLTSQEDWGSLDSDRLFDQSSSDYQWWDFWA 238

The following BLAST results are available for this feature:
BLAST of Csa3G119240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATB12_ARATH8.2e-4849.34Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana GN=ATHB-12 PE=1 ... [more]
ATHB7_ARATH1.1e-4745.35Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana GN=ATHB-7 PE=1 SV... [more]
HOX6_ORYSI1.4e-3169.07Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica GN=HOX6 PE=2 ... [more]
HOX6_ORYSJ1.4e-3169.07Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica GN=HOX6 PE=... [more]
HOX22_ORYSJ6.6e-2947.68Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. japonica GN=HOX22 P... [more]
BLAST of Csa3G119240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L317_CUCSA1.4e-126100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119240 PE=4 SV=1[more]
B9I924_POPTR6.8e-6557.81Homeobox leucine zipper family protein OS=Populus trichocarpa GN=POPTR_0014s0986... [more]
B9GR61_POPTR3.4e-6457.32Homeobox leucine zipper family protein OS=Populus trichocarpa GN=POPTR_0002s1768... [more]
A0A096YDU1_ROSHC6.3e-6360.08Homeobox-leucine zipper protein 1 OS=Rosa hybrid cultivar GN=HB1 PE=2 SV=1[more]
A0A067JWT5_JATCU1.1e-6255.65Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14207 PE=4 SV=1[more]
BLAST of Csa3G119240 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G61890.14.6e-4949.34 homeobox 12[more]
AT2G46680.16.1e-4945.35 homeobox 7[more]
AT2G22430.15.5e-2645.24 homeobox protein 6[more]
AT5G65310.13.6e-2544.00 homeobox protein 5[more]
AT4G40060.16.1e-2544.35 homeobox protein 16[more]
BLAST of Csa3G119240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432008|ref|XP_004133792.1|2.0e-126100.00PREDICTED: homeobox-leucine zipper protein ATHB-12 [Cucumis sativus][more]
gi|659074881|ref|XP_008437846.1|2.5e-11392.61PREDICTED: homeobox-leucine zipper protein ATHB-7 [Cucumis melo][more]
gi|224130632|ref|XP_002320889.1|9.7e-6557.81homeobox leucine zipper family protein [Populus trichocarpa][more]
gi|743827825|ref|XP_011023121.1|1.3e-6457.32PREDICTED: homeobox-leucine zipper protein ATHB-7-like [Populus euphratica][more]
gi|224068066|ref|XP_002302659.1|4.8e-6457.32homeobox leucine zipper family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000047HTH_motif
IPR001356Homeobox_dom
IPR003106Leu_zip_homeo
IPR009057Homeobox-like_sf
IPR017970Homeobox_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU121034cucumber EST collection version 3.0transcribed_cluster
CU123233cucumber EST collection version 3.0transcribed_cluster
CU165356cucumber EST collection version 3.0transcribed_cluster
CU166455cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G119240.1Csa3G119240.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU165356CU165356transcribed_cluster
CU123233CU123233transcribed_cluster
CU166455CU166455transcribed_cluster
CU121034CU121034transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000047Helix-turn-helix motifPRINTSPR00031HTHREPRESSRcoord: 52..61
score: 3.0E-5coord: 61..77
score: 3.
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 26..79
score: 3.3
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 23..85
score: 1.7
IPR001356Homeobox domainPROFILEPS50071HOMEOBOX_2coord: 21..81
score: 17
IPR003106Leucine zipper, homeobox-associatedPFAMPF02183HALZcoord: 81..123
score: 2.8
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 26..88
score: 1.1
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 12..83
score: 5.43
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 56..79
scor
NoneNo IPR availableunknownCoilCoilcoord: 94..128
scor
NoneNo IPR availablePANTHERPTHR24326FAMILY NOT NAMEDcoord: 22..130
score: 1.8
NoneNo IPR availablePANTHERPTHR24326:SF122HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-12-RELATEDcoord: 22..130
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G119240Cla021121Watermelon (97103) v1cuwmB233
Csa3G119240MELO3C005992Melon (DHL92) v3.5.1cumeB236
Csa3G119240ClCG05G000530Watermelon (Charleston Gray)cuwcgB222
Csa3G119240Lsi05G021630Bottle gourd (USVL1VR-Ls)culsiB209
Csa3G119240MELO3C005992.2Melon (DHL92) v3.6.1cumedB223
Csa3G119240Cla97C05G080560Watermelon (97103) v2cuwmbB204
Csa3G119240Bhi01G000395Wax gourdcuwgoB284
Csa3G119240CSPI03G07600Wild cucumber (PI 183967)cpicuB120
Csa3G119240Cucsa.259560Cucumber (Gy14) v1cgycuB366
Csa3G119240CmaCh14G021320Cucurbita maxima (Rimu)cmacuB253
Csa3G119240CmoCh14G021960Cucurbita moschata (Rifu)cmocuB239
Csa3G119240Cp4.1LG03g15880Cucurbita pepo (Zucchini)cpecuB609
Csa3G119240CsGy3G007760Cucumber (Gy14) v2cgybcuB109
Csa3G119240Carg25717Silver-seed gourdcarcuB0132
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G119240Cucumber (Chinese Long) v2cucuB095
Csa3G119240Cucumber (Gy14) v1cgycuB307
Csa3G119240Cucurbita maxima (Rimu)cmacuB285
Csa3G119240Cucurbita maxima (Rimu)cmacuB818
Csa3G119240Cucurbita maxima (Rimu)cmacuB830
Csa3G119240Cucurbita moschata (Rifu)cmocuB593
Csa3G119240Cucurbita moschata (Rifu)cmocuB806
Csa3G119240Melon (DHL92) v3.5.1cumeB175
Csa3G119240Watermelon (97103) v1cuwmB258
Csa3G119240Cucurbita pepo (Zucchini)cpecuB862
Csa3G119240Melon (DHL92) v3.6.1cumedB157
Csa3G119240Silver-seed gourdcarcuB1007
Csa3G119240Wax gourdcuwgoB261