ClCG04G007660 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCCATTTCTATTCCTTCTCTTCATCTTCGTCAATGCTCTTCTCAATTCAGTCTCCGTTGGAGCCGCTCCACCGCCGACCTCTGCCGAATCGCCTTCCGGAAGAAAGCTCGGTAAGCACCACAGTGCGGCGGTTGTTTTTTTGAGTCCGTCTGAAGCGCCACGAAGCGAAATGAAAGTTCAGGGGACCTCGGCGGCGGCAGCGGCGAGCGGTGGAGGGAGTGGGAATGAGATTCAGTTGGAGAATAATCATGAGCATCATAAGTCGAGAGATAAGTCTATCGCCGGCGGCGGCGTGATTTTGGGCGGATTCGCTACCACTTTTCTGGTGGCGATTATATGTTACATTAGAGCTACAAGGCGACAGAAAGCAGAAGTGAACTCAGCTTTTGAGACGACATGTCGTCCGCGTTGTTAG ATGCCTCCATTTCTATTCCTTCTCTTCATCTTCGTCAATGCTCTTCTCAATTCAGTCTCCGTTGGAGCCGCTCCACCGCCGACCTCTGCCGAATCGCCTTCCGGAAGAAAGCTCGGTAAGCACCACAGTGCGGCGGTTGTTTTTTTGAGTCCGTCTGAAGCGCCACGAAGCGAAATGAAAGTTCAGGGGACCTCGGCGGCGGCAGCGGCGAGCGGTGGAGGGAGTGGGAATGAGATTCAGTTGGAGAATAATCATGAGCATCATAAGTCGAGAGATAAGTCTATCGCCGGCGGCGGCGTGATTTTGGGCGGATTCGCTACCACTTTTCTGGTGGCGATTATATGTTACATTAGAGCTACAAGGCGACAGAAAGCAGAAGTGAACTCAGCTTTTGAGACGACATGTCGTCCGCGTTGTTAG ATGCCTCCATTTCTATTCCTTCTCTTCATCTTCGTCAATGCTCTTCTCAATTCAGTCTCCGTTGGAGCCGCTCCACCGCCGACCTCTGCCGAATCGCCTTCCGGAAGAAAGCTCGGTAAGCACCACAGTGCGGCGGTTGTTTTTTTGAGTCCGTCTGAAGCGCCACGAAGCGAAATGAAAGTTCAGGGGACCTCGGCGGCGGCAGCGGCGAGCGGTGGAGGGAGTGGGAATGAGATTCAGTTGGAGAATAATCATGAGCATCATAAGTCGAGAGATAAGTCTATCGCCGGCGGCGGCGTGATTTTGGGCGGATTCGCTACCACTTTTCTGGTGGCGATTATATGTTACATTAGAGCTACAAGGCGACAGAAAGCAGAAGTGAACTCAGCTTTTGAGACGACATGTCGTCCGCGTTGTTAG MPPFLFLLFIFVNALLNSVSVGAAPPPTSAESPSGRKLGKHHSAAVVFLSPSEAPRSEMKVQGTSAAAAASGGGSGNEIQLENNHEHHKSRDKSIAGGGVILGGFATTFLVAIICYIRATRRQKAEVNSAFETTCRPRC
BLAST of ClCG04G007660 vs. TrEMBL
Match: A0A0A0KXQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G303070 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 9.4e-46 Identity = 97/129 (75.19%), Postives = 109/129 (84.50%), Query Frame = 1
BLAST of ClCG04G007660 vs. TrEMBL
Match: A0A061ERA0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021829 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.1e-17 Identity = 59/125 (47.20%), Postives = 75/125 (60.00%), Query Frame = 1
BLAST of ClCG04G007660 vs. TrEMBL
Match: A0A0D2QBK7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G169200 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 9.2e-17 Identity = 61/147 (41.50%), Postives = 79/147 (53.74%), Query Frame = 1
BLAST of ClCG04G007660 vs. TrEMBL
Match: B9T882_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0128720 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 4.6e-16 Identity = 62/136 (45.59%), Postives = 74/136 (54.41%), Query Frame = 1
BLAST of ClCG04G007660 vs. TrEMBL
Match: W9QQS8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016948 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 7.8e-16 Identity = 53/109 (48.62%), Postives = 67/109 (61.47%), Query Frame = 1
BLAST of ClCG04G007660 vs. TAIR10
Match: AT3G09280.1 (AT3G09280.1 unknown protein) HSP 1 Score: 65.9 bits (159), Expect = 2.3e-11 Identity = 41/101 (40.59%), Postives = 50/101 (49.50%), Query Frame = 1
BLAST of ClCG04G007660 vs. NCBI nr
Match: gi|659069182|ref|XP_008448528.1| (PREDICTED: uncharacterized protein LOC103490675 [Cucumis melo]) HSP 1 Score: 193.4 bits (490), Expect = 2.7e-46 Identity = 100/129 (77.52%), Postives = 109/129 (84.50%), Query Frame = 1
BLAST of ClCG04G007660 vs. NCBI nr
Match: gi|778693571|ref|XP_011653657.1| (PREDICTED: uncharacterized protein LOC105435242 [Cucumis sativus]) HSP 1 Score: 191.0 bits (484), Expect = 1.4e-45 Identity = 97/129 (75.19%), Postives = 109/129 (84.50%), Query Frame = 1
BLAST of ClCG04G007660 vs. NCBI nr
Match: gi|590629022|ref|XP_007026874.1| (Uncharacterized protein TCM_021829 [Theobroma cacao]) HSP 1 Score: 97.8 bits (242), Expect = 1.6e-17 Identity = 59/125 (47.20%), Postives = 75/125 (60.00%), Query Frame = 1
BLAST of ClCG04G007660 vs. NCBI nr
Match: gi|823166649|ref|XP_012483276.1| (PREDICTED: uncharacterized protein LOC105797958 [Gossypium raimondii]) HSP 1 Score: 94.7 bits (234), Expect = 1.3e-16 Identity = 61/147 (41.50%), Postives = 79/147 (53.74%), Query Frame = 1
BLAST of ClCG04G007660 vs. NCBI nr
Match: gi|223525263|gb|EEF27931.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 92.4 bits (228), Expect = 6.5e-16 Identity = 62/136 (45.59%), Postives = 74/136 (54.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |