ClCG03G003830 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG03G003830
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Thylakoid lumenal 17.9 kDa protein
Location	CG_Chr03 : 4154258 .. 4157224 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGACAGAACCAAAAATGAGTTCGCTCCAATTTCGCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAACCAGTACCACTCCCCAGCCTCTCTTCCTTCCATGGCCGCTCTTCAAAATTCAAACCACAAACCCATTGTCCTTTCTCATCTTCTTTCATTTGCCCTTTCTGTAACCCTAAGCTCACCATTTCCTTCTCTCGCAATCCCTTCTCTTAACTCCCTCTCCTCTCCACTTTCTCCCACTACTCCATTTTCTCAATCCAAGAACTTACCAACTGGACTAGAAAACGGGTACGCTCTGAATCTTGTAATTTCAACTGTTGTTCAATTTTGTTACTAGTTCATAGTTTCTGTGTGCCCCAAATTTGCATTGGTTTTCTGAATTGATTCATTGACAATGTAGCTAACTGCCTCTTTGGGGGTTTCCCCCAATGTTGTTCACCTTAATGTTGCAGGAAAATTATGCCCTGCCCATCAACCAATCCGTCTTGTGTTTCCACAAATCCTAAATCATCTTCTTTTGCATTCCCTTTAAACATTCCTGAGAATTTCAGTGGGAATCCAATTCAGGTTTTAGTTCTCTGAAAGCCGAGCATGATTTGCTTGTATGTTCTTCTACAAAATTGGTTTCTCTTGGTGGTGTTGCTTTTTCATGTTCCTGCTCTACGTTTATTTGCAGAAGCTGCAGGAAGCAATCCTTGAAACACAGAGGAATCCAAAAATTCAGGTGGTGGAGGATACTCCTTATGGTAATTGAATTGAACTTATCAATTGCAGATTTGAACTTTGCATTTCTGATTGATATACATATTTTAATTAGACTGCTGAGGTGAGATGAGAATGGATTCTATTTACCATAGTGACTGTTGGCTTATTCTTTTGAATTCAATAGTGCTTTAACATAGATAAAGTAGTAAATCCTTGGTTGAGTTATAAAGAAGTTTGATTTTTGAATTCTCAAAAATAGATAATAGTTCCTTAAAGTTTCATTGTTATATCTATAGGTTCTTTTAACTTTATAAAGGATCTATGTGGCTGCACATGGCTTGGTTATGACTATAAAAAATATTTAACCTACAAATTTTGGGGAAAATTGATACTCCTGTGGTTTGAATTTTTATATATTGATCAACCCTAAAGTAGTAGAATGACATCTTCGTGCTCTAGTCATAGCCAACTAAATCTTTTTATATCTCTTAATATTTCAAATATCGTTAATCGAATTAACTTTGTATGTTTTTAGTGAAGTATATTTTGCTTTGATGTTGAATTTACATCATTTATCTATCAAGAAGTATTAATATATCAACATAGATGCATATATTTTAGGGAAAATATTAATTTATACCCATAAACTATAGTAGCTATCAATTTAAATCCTGAACTAATAATTGTACTAATTTAAACCCTCAACTTTTGTAAGCGTATCAATTTACACCTTCCATTATGTGTCGTTTGAAAAAAACCTTGTGTTGTAATCGTATCAACTACACTCCCAAACTTTTATAAATGTATCAATTTAGACTCTTAGACAAAATTTCTTTTGAAAATAGTCAATGCATTTACTCTAATTGTCCATTATATAAAACAACTTTTGAAGAAGTCTACACACGTTTGAAAAATAATACACAAATAATTTTCAAATTAGGTAATCGTCAATCAGGGTCTTAGAGATTTGTTGGTTTATGAAAATTTAAAAGTTGAGTTGACTTACATTAAAATTTCACTCAATATTGGTCAAATGAAACTTAGAGGAGGGTGTAAATCGATACATTTATGAAAGTTCAAGGTTAAAATTGATATAATTATTAGTTTAGGGTTTTAATTGATACAACCTCAAAAATTTAGGGGTATAAATTGATATTTATCCTATATTTTATATTGAAAAAAAGCGTCTCCCAAATGTGTTCGTGTCCTAATATTTAAGAAATTGATGGGTCACCGTGTCCGTGTTTGTGCTTCTCAGTTCGTGGATTTATGTGATTCAAAATCAAAAGTTTGAGGAATTATTTTGTTAAACACTTGTTAAGTTCCAGAACCAATGAAATAGAACTTAGAAAGGGTAGAGACCTATATCGATACCATTTAGGCGTTAAAATGTTGAGCCTTTCACGTAAAAGAGAGTATGGTTATGGCTTATTGAACAAGATGCATTTATGATTATGACAGGTCAATATTTAGAAGCTGAGGTAGATGGGAACTTTGGGCGAGATGTGATTGAGTTTTTGGTGAAAGGAGATGTGGCTGCATATAGAATCATGGCTACAAAGGTGACTTATGTGTATCCCTTCACAACTGCTTTAGGGGACTCCAAAGGACAGGAAGAACGAATGAGGAAGATCATAGACCAGTTGGATTGGTATTCTCCAACCTTCGAATCCATGGATGACTAGTACAAATCCTGCTCTTTTTCTTTTTTCTTTATTTTCTTCCCTTTCATTTTTACTCAATCTGATTAAACTCATTTTCAGCCGCAAATATTTTTGCCTTAAATTATATATATAAGAATGTTTCTACTTCATTCCCATCCAGAATTATTCTGTTGATATTTTATGAGTTATTTATACCAACTAATGGTCGGAAATTATGTTTTAAATACTCAAAATCTATTAGAGTTTAGCTCAAGTTATTGAAGTTGTACTAAACATGGCCCAACAATTTGTGTGTGTGTGTATATATATATATATTATATATATATATATCCTAAATTCATAACGTAAAAGTTTGTTTTTATAATGAATAATAGAGGGTAGATTTTTTATAATGGTTTTTTAATAGTTGGTTTATTTATTTTTTTGTTTTTAGTTGACATGTACGAGGGAAGAGGGAAGATTCAAGCGTTTGATCTCTAATTGTCAACATTGTCAACATACTCAAAATAAGGGAGGGAGAAAGATGAAAGATTGTAGGAGAAAATTTTATGATTTTCATATATTATTGGTTGAAAATATATCAATTATA

mRNA sequence

GAGGACAGAACCAAAAATGAGTTCGCTCCAATTTCGCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAACCAGTACCACTCCCCAGCCTCTCTTCCTTCCATGGCCGCTCTTCAAAATTCAAACCACAAACCCATTGTCCTTTCTCATCTTCTTTCATTTGCCCTTTCTGTAACCCTAAGCTCACCATTTCCTTCTCTCGCAATCCCTTCTCTTAACTCCCTCTCCTCTCCACTTTCTCCCACTACTCCATTTTCTCAATCCAAGAACTTACCAACTGGACTAGAAAACGGGAAAATTATGCCCTGCCCATCAACCAATCCGTCTTGTGTTTCCACAAATCCTAAATCATCTTCTTTTGCATTCCCTTTAAACATTCCTGAGAATTTCAGTGGGAATCCAATTCAGAAGCTGCAGGAAGCAATCCTTGAAACACAGAGGAATCCAAAAATTCAGGTGGTGGAGGATACTCCTTATGGTCAATATTTAGAAGCTGAGGTAGATGGGAACTTTGGGCGAGATGTGATTGAGTTTTTGGTGAAAGGAGATGTGGCTGCATATAGAATCATGGCTACAAAGGTGACTTATGTGTATCCCTTCACAACTGCTTTAGGGGACTCCAAAGGACAGGAAGAACGAATGAGGAAGATCATAGACCAGTTGGATTGGTATTCTCCAACCTTCGAATCCATGGATGACTATTGACATGTACGAGGGAAGAGGGAAGATTCAAGCGTTTGATCTCTAATTGTCAACATTGTCAACATACTCAAAATAAGGGAGGGAGAAAGATGAAAGATTGTAGGAGAAAATTTTATGATTTTCATATATTATTGGTTGAAAATATATCAATTATA

Coding sequence (CDS)

ATGAGTTCGCTCCAATTTCGCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAACCAGTACCACTCCCCAGCCTCTCTTCCTTCCATGGCCGCTCTTCAAAATTCAAACCACAAACCCATTGTCCTTTCTCATCTTCTTTCATTTGCCCTTTCTGTAACCCTAAGCTCACCATTTCCTTCTCTCGCAATCCCTTCTCTTAACTCCCTCTCCTCTCCACTTTCTCCCACTACTCCATTTTCTCAATCCAAGAACTTACCAACTGGACTAGAAAACGGGAAAATTATGCCCTGCCCATCAACCAATCCGTCTTGTGTTTCCACAAATCCTAAATCATCTTCTTTTGCATTCCCTTTAAACATTCCTGAGAATTTCAGTGGGAATCCAATTCAGAAGCTGCAGGAAGCAATCCTTGAAACACAGAGGAATCCAAAAATTCAGGTGGTGGAGGATACTCCTTATGGTCAATATTTAGAAGCTGAGGTAGATGGGAACTTTGGGCGAGATGTGATTGAGTTTTTGGTGAAAGGAGATGTGGCTGCATATAGAATCATGGCTACAAAGGTGACTTATGTGTATCCCTTCACAACTGCTTTAGGGGACTCCAAAGGACAGGAAGAACGAATGAGGAAGATCATAGACCAGTTGGATTGGTATTCTCCAACCTTCGAATCCATGGATGACTATTGA

Protein sequence

MSSLQFRPPLVSPWKKKKKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDDY

Homology

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BLAST of ClCG03G003830 vs. Swiss-Prot
Match: TL1Y_ARATH (Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At4g24930 PE=1 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 7.1e-68
Identity = 133/195 (68.21%), Postives = 160/195 (82.05%), Query Frame = 1


Query: 36  NSNHKPI-VLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENG 95
           +S   PI +L  L+SFAL+++L+S  P+LAIPSL+S S PL  TTPF+QSK + TGL NG
Sbjct: 34  SSTSPPISLLPKLISFALAISLTSFSPALAIPSLSS-SQPL--TTPFTQSKFVQTGLLNG 93

Query: 96  KIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTP 155
           KI PCPSTNP CVSTNP SSSF+FPL IPE  + +PI+KL+EAI+ TQ+NPK  V+EDTP
Sbjct: 94  KIRPCPSTNPGCVSTNPTSSSFSFPLTIPETDTQDPIEKLKEAIMSTQKNPKFVVLEDTP 153

Query: 156 YGQYLEAEVD-GNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKI 215
           YG+Y+EAEV+ G F RDV+EFLVK DV AYR MATKVT+VYPFTTA GDSKGQEER++K+
Sbjct: 154 YGRYVEAEVEGGGFSRDVMEFLVKQDVVAYRCMATKVTFVYPFTTAFGDSKGQEERLKKL 213

Query: 216 IDQLDWYSPTFESMD 229
           IDQL WY+PTFESM+
Sbjct: 214 IDQLGWYAPTFESME 225

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BLAST of ClCG03G003830 vs. TrEMBL
Match: A0A0A0LRK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050570 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 5.6e-120
Identity = 215/232 (92.67%), Postives = 223/232 (96.12%), Query Frame = 1


Query: 1   MSSLQFRPPLVSPWKKK---KKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTLS 60
           MSSLQFRPPLVSPWKKK    KNQYHSP S+PSM+ LQN+NHKPI LSHLLSFALS+TLS
Sbjct: 1   MSSLQFRPPLVSPWKKKDNNNKNQYHSPVSVPSMSTLQNANHKPIFLSHLLSFALSITLS 60

Query: 61  SPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFA 120
           SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPS NPSCVSTNPKSSSFA
Sbjct: 61  SPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSANPSCVSTNPKSSSFA 120

Query: 121 FPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVK 180
           FPLNIP+NFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV+
Sbjct: 121 FPLNIPDNFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVR 180

Query: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
           GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 232

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BLAST of ClCG03G003830 vs. TrEMBL
Match: A0A067JIF3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26439 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 7.4e-80
Identity = 151/196 (77.04%), Postives = 172/196 (87.76%), Query Frame = 1


Query: 33  ALQNSNHKPIVLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLE 92
           +L+    KPI+L++LLS AL+VTL+SP PSLAIPS NSLSSP+ PTTPFSQSKNL  G E
Sbjct: 33  SLEIPTPKPILLTNLLSLALTVTLNSPLPSLAIPSPNSLSSPVIPTTPFSQSKNLILGPE 92

Query: 93  NGKIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVED 152
           +GKI PCPSTNPSCVSTNPKSSSFAFPL IP++ + N IQKLQEAIL+TQRN KIQV+ED
Sbjct: 93  DGKIRPCPSTNPSCVSTNPKSSSFAFPLTIPDDSTDNAIQKLQEAILKTQRNAKIQVIED 152

Query: 153 TPYGQYLEAEVDGNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRK 212
            P G YL+AEVDG FGRDV+EFLVKGDV AYR MATKVTYVYPFTTALGDSKGQEERM+K
Sbjct: 153 APNGTYLQAEVDGGFGRDVLEFLVKGDVVAYRCMATKVTYVYPFTTALGDSKGQEERMKK 212

Query: 213 IIDQLDWYSPTFESMD 229
           II+QL WY+P+F+SMD
Sbjct: 213 IIEQLGWYAPSFDSMD 228

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BLAST of ClCG03G003830 vs. TrEMBL
Match: D7SH07_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g01170 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 5.3e-78
Identity = 148/194 (76.29%), Postives = 166/194 (85.57%), Query Frame = 1


Query: 35  QNSNHKPIVLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENG 94
           +NSN +P +L +LLSFAL+V+L+S   SLA+PS+NS SS L PTTPFSQSKNL  GLENG
Sbjct: 33  RNSNTRPFLLPNLLSFALTVSLASSPLSLALPSINSQSSLLPPTTPFSQSKNLQVGLENG 92

Query: 95  KIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTP 154
           KI PCPS NP CVSTNPKSSSFAFPL IPE +S N +QKLQE IL+TQRN KIQVVEDTP
Sbjct: 93  KIRPCPSINPGCVSTNPKSSSFAFPLTIPEKYSDNAVQKLQETILKTQRNAKIQVVEDTP 152

Query: 155 YGQYLEAEVDGNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKII 214
            GQYL AEVDG FGRD++EFLVKGDV AYR MATKVTYVYPFTTALGDSKGQEERM+KII
Sbjct: 153 DGQYLRAEVDGGFGRDIMEFLVKGDVVAYRTMATKVTYVYPFTTALGDSKGQEERMKKII 212

Query: 215 DQLDWYSPTFESMD 229
           D L WY+P+ +SMD
Sbjct: 213 DLLGWYAPSLDSMD 226

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BLAST of ClCG03G003830 vs. TrEMBL
Match: V4VCK3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032623mg PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 2.6e-77
Identity = 154/230 (66.96%), Postives = 179/230 (77.83%), Query Frame = 1


Query: 5   QFRPPLVSPWKK-----KKKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTLSSP 64
           +F+PP  S  K      KK +  H     P+ +  Q    KPI+LSHLLS AL+ T +SP
Sbjct: 7   RFQPPDFSLIKSSTIFTKKSSLCHGHHPEPAASTSQALYKKPIILSHLLSLALTATFNSP 66

Query: 65  FPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGL-ENGKIMPCPSTNPSCVSTNPKSSSFAF 124
            P LA+PS+NS    LSPTTPFSQSKNL  GL E+GKI PCPSTNP CVSTNPKSSSFAF
Sbjct: 67  LPCLAVPSVNSQFPLLSPTTPFSQSKNLQLGLQEDGKIRPCPSTNPGCVSTNPKSSSFAF 126

Query: 125 PLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKG 184
           PL IPEN + N IQKLQEAIL+TQ+N KI VVEDTP+GQYL+AEVDG FGRDV+EFLVKG
Sbjct: 127 PLRIPENSTENAIQKLQEAILKTQKNVKIGVVEDTPFGQYLQAEVDGGFGRDVLEFLVKG 186

Query: 185 DVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMD 229
           DV AYR +A KVTYVYPFTTALGDSKGQEERM++II +L WY+P+F+SM+
Sbjct: 187 DVVAYRSVAKKVTYVYPFTTALGDSKGQEERMKQIIAELGWYAPSFDSME 236

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BLAST of ClCG03G003830 vs. TrEMBL
Match: A0A067E7V8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026604mg PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 5.9e-77
Identity = 149/213 (69.95%), Postives = 172/213 (80.75%), Query Frame = 1


Query: 17  KKKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLS 76
           KK +  H     P+ +  Q    KPI+LSHLLS AL+ T +SP P LA+PS+NS    LS
Sbjct: 24  KKSSLCHGHHPEPAASTSQALYKKPIILSHLLSLALTATFNSPLPCLAVPSVNSQFPLLS 83

Query: 77  PTTPFSQSKNLPTGL-ENGKIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQ 136
           PTTPFSQSKNL  GL E+GKI PCPSTNP CVSTNPKSSSFAFPL IPEN + N IQKLQ
Sbjct: 84  PTTPFSQSKNLQLGLQEDGKIRPCPSTNPGCVSTNPKSSSFAFPLRIPENSTENAIQKLQ 143

Query: 137 EAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGDVAAYRIMATKVTYVYP 196
           EAIL+TQ+N KI VVEDTP+GQYL+AEVDG FGRDV+EFLVKGDV AYR +A KVTYVYP
Sbjct: 144 EAILKTQKNAKIGVVEDTPFGQYLQAEVDGGFGRDVLEFLVKGDVVAYRSVAKKVTYVYP 203

Query: 197 FTTALGDSKGQEERMRKIIDQLDWYSPTFESMD 229
           FTTALGDSKGQEERM++II +L WY+P+F+SM+
Sbjct: 204 FTTALGDSKGQEERMKQIIAELGWYAPSFDSME 236

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BLAST of ClCG03G003830 vs. TAIR10
Match: AT4G24930.1 (AT4G24930.1 thylakoid lumenal 17.9 kDa protein, chloroplast)

HSP 1 Score: 258.5 bits (659), Expect = 4.0e-69
Identity = 133/195 (68.21%), Postives = 160/195 (82.05%), Query Frame = 1


Query: 36  NSNHKPI-VLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENG 95
           +S   PI +L  L+SFAL+++L+S  P+LAIPSL+S S PL  TTPF+QSK + TGL NG
Sbjct: 34  SSTSPPISLLPKLISFALAISLTSFSPALAIPSLSS-SQPL--TTPFTQSKFVQTGLLNG 93

Query: 96  KIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTP 155
           KI PCPSTNP CVSTNP SSSF+FPL IPE  + +PI+KL+EAI+ TQ+NPK  V+EDTP
Sbjct: 94  KIRPCPSTNPGCVSTNPTSSSFSFPLTIPETDTQDPIEKLKEAIMSTQKNPKFVVLEDTP 153

Query: 156 YGQYLEAEVD-GNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKI 215
           YG+Y+EAEV+ G F RDV+EFLVK DV AYR MATKVT+VYPFTTA GDSKGQEER++K+
Sbjct: 154 YGRYVEAEVEGGGFSRDVMEFLVKQDVVAYRCMATKVTFVYPFTTAFGDSKGQEERLKKL 213

Query: 216 IDQLDWYSPTFESMD 229
           IDQL WY+PTFESM+
Sbjct: 214 IDQLGWYAPTFESME 225

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BLAST of ClCG03G003830 vs. NCBI nr
Match: gi|449474267|ref|XP_004154123.1| (PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 438.3 bits (1126), Expect = 8.0e-120
Identity = 215/232 (92.67%), Postives = 223/232 (96.12%), Query Frame = 1


Query: 1   MSSLQFRPPLVSPWKKK---KKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTLS 60
           MSSLQFRPPLVSPWKKK    KNQYHSP S+PSM+ LQN+NHKPI LSHLLSFALS+TLS
Sbjct: 1   MSSLQFRPPLVSPWKKKDNNNKNQYHSPVSVPSMSTLQNANHKPIFLSHLLSFALSITLS 60

Query: 61  SPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFA 120
           SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPS NPSCVSTNPKSSSFA
Sbjct: 61  SPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSANPSCVSTNPKSSSFA 120

Query: 121 FPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVK 180
           FPLNIP+NFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV+
Sbjct: 121 FPLNIPDNFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVR 180

Query: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
           GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 232

[Close]

BLAST of ClCG03G003830 vs. NCBI nr
Match: gi|659067523|ref|XP_008439847.1| (PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis melo])

HSP 1 Score: 434.9 bits (1117), Expect = 8.9e-119
Identity = 215/233 (92.27%), Postives = 223/233 (95.71%), Query Frame = 1


Query: 1   MSSLQFRPPLVSPWKKK----KKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTL 60
           MSSLQFRP LVSPWKKK     KNQYHSP S+PSM+ALQN NHKPI LSHLLSFALS+TL
Sbjct: 1   MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60

Query: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
           +SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF
Sbjct: 61  TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120

Query: 121 AFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
           AFPLNIP+NFSGNPIQKLQEAILETQRNPKIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180

Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
           KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 233

[Close]

BLAST of ClCG03G003830 vs. NCBI nr
Match: gi|802771103|ref|XP_012090684.1| (PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Jatropha curcas])

HSP 1 Score: 305.1 bits (780), Expect = 1.1e-79
Identity = 151/196 (77.04%), Postives = 172/196 (87.76%), Query Frame = 1


Query: 33  ALQNSNHKPIVLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLE 92
           +L+    KPI+L++LLS AL+VTL+SP PSLAIPS NSLSSP+ PTTPFSQSKNL  G E
Sbjct: 33  SLEIPTPKPILLTNLLSLALTVTLNSPLPSLAIPSPNSLSSPVIPTTPFSQSKNLILGPE 92

Query: 93  NGKIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVED 152
           +GKI PCPSTNPSCVSTNPKSSSFAFPL IP++ + N IQKLQEAIL+TQRN KIQV+ED
Sbjct: 93  DGKIRPCPSTNPSCVSTNPKSSSFAFPLTIPDDSTDNAIQKLQEAILKTQRNAKIQVIED 152

Query: 153 TPYGQYLEAEVDGNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRK 212
            P G YL+AEVDG FGRDV+EFLVKGDV AYR MATKVTYVYPFTTALGDSKGQEERM+K
Sbjct: 153 APNGTYLQAEVDGGFGRDVLEFLVKGDVVAYRCMATKVTYVYPFTTALGDSKGQEERMKK 212

Query: 213 IIDQLDWYSPTFESMD 229
           II+QL WY+P+F+SMD
Sbjct: 213 IIEQLGWYAPSFDSMD 228

[Close]

BLAST of ClCG03G003830 vs. NCBI nr
Match: gi|225456361|ref|XP_002280221.1| (PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Vitis vinifera])

HSP 1 Score: 298.9 bits (764), Expect = 7.6e-78
Identity = 148/194 (76.29%), Postives = 166/194 (85.57%), Query Frame = 1


Query: 35  QNSNHKPIVLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENG 94
           +NSN +P +L +LLSFAL+V+L+S   SLA+PS+NS SS L PTTPFSQSKNL  GLENG
Sbjct: 33  RNSNTRPFLLPNLLSFALTVSLASSPLSLALPSINSQSSLLPPTTPFSQSKNLQVGLENG 92

Query: 95  KIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTP 154
           KI PCPS NP CVSTNPKSSSFAFPL IPE +S N +QKLQE IL+TQRN KIQVVEDTP
Sbjct: 93  KIRPCPSINPGCVSTNPKSSSFAFPLTIPEKYSDNAVQKLQETILKTQRNAKIQVVEDTP 152

Query: 155 YGQYLEAEVDGNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKII 214
            GQYL AEVDG FGRD++EFLVKGDV AYR MATKVTYVYPFTTALGDSKGQEERM+KII
Sbjct: 153 DGQYLRAEVDGGFGRDIMEFLVKGDVVAYRTMATKVTYVYPFTTALGDSKGQEERMKKII 212

Query: 215 DQLDWYSPTFESMD 229
           D L WY+P+ +SMD
Sbjct: 213 DLLGWYAPSLDSMD 226

[Close]

BLAST of ClCG03G003830 vs. NCBI nr
Match: gi|1009130226|ref|XP_015882182.1| (PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 297.7 bits (761), Expect = 1.7e-77
Identity = 154/201 (76.62%), Postives = 172/201 (85.57%), Query Frame = 1


Query: 33  ALQNSN---HKPIVLSHLLSFALSVTL-SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLP 92
           +LQN N    KPI+L  LLS ALS TL SSP PSLAIPS++S SS LSPTTPFSQSKNL 
Sbjct: 32  SLQNPNPEVKKPILLPSLLSLALSATLISSPLPSLAIPSISSQSSLLSPTTPFSQSKNLE 91

Query: 93  TGLENGKIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQ 152
           TGL+NGKI PCPSTNP C+STNP+SSSFAFPL IPE  S N IQKLQEAIL+TQ+N KIQ
Sbjct: 92  TGLDNGKIRPCPSTNPGCISTNPRSSSFAFPLKIPERSSENAIQKLQEAILKTQKNAKIQ 151

Query: 153 VVEDTPYGQYLEAEVDGNF-GRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQE 212
           VVEDTP GQYL+AEVDG F  RDV+EFLVK D+AAYR MATKVTY+YPFTTALGDSKGQE
Sbjct: 152 VVEDTPDGQYLQAEVDGGFNARDVVEFLVKEDLAAYRCMATKVTYIYPFTTALGDSKGQE 211

Query: 213 ERMRKIIDQLDWYSPTFESMD 229
           ERM+KIID+L WY+P+F+SMD
Sbjct: 212 ERMKKIIDELGWYAPSFDSMD 232

The following BLAST results are available for this feature:

BLAST of ClCG03G003830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TL1Y_ARATH	7.1e-68	68.21	Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At4...	[more]

BLAST of ClCG03G003830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRK9_CUCSA	5.6e-120	92.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050570 PE=4 SV=1	[more]
A0A067JIF3_JATCU	7.4e-80	77.04	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26439 PE=4 SV=1	[more]
D7SH07_VITVI	5.3e-78	76.29	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g01170 PE=4 SV=...	[more]
V4VCK3_9ROSI	2.6e-77	66.96	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032623mg PE=4 SV=1	[more]
A0A067E7V8_CITSI	5.9e-77	69.95	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026604mg PE=4 SV=1	[more]

BLAST of ClCG03G003830 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G24930.1	4.0e-69	68.21	thylakoid lumenal 17.9 kDa protein, chloroplast	[more]

BLAST of ClCG03G003830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449474267\|ref\|XP_004154123.1\|	8.0e-120	92.67	PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis sativus]	[more]
gi\|659067523\|ref\|XP_008439847.1\|	8.9e-119	92.27	PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis melo]	[more]
gi\|802771103\|ref\|XP_012090684.1\|	1.1e-79	77.04	PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Jatropha curcas]	[more]
gi\|225456361\|ref\|XP_002280221.1\|	7.6e-78	76.29	PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Vitis vinifera]	[more]
gi\|1009130226\|ref\|XP_015882182.1\|	1.7e-77	76.62	PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0009543	chloroplast thylakoid lumen
cellular_component	GO:0009536	plastid
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G003830.1	ClCG03G003830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36783	FAMILY NOT NAMED	coord: 21..230 score: 1.4
None	No IPR available	PANTHER	PTHR36783:SF1	THYLAKOID LUMENAL 17.9 KDA PROTEIN, CHLOROPLASTIC	coord: 21..230 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG03G003830	Csa1G050570	Cucumber (Chinese Long) v2	cuwcgB035
ClCG03G003830	MELO3C002367	Melon (DHL92) v3.5.1	mewcgB152
ClCG03G003830	Cla002626	Watermelon (97103) v1	wcgwmB223
ClCG03G003830	Cla97C03G054960	Watermelon (97103) v2	wcgwmbB186
ClCG03G003830	Bhi08G001234	Wax gourd	wcgwgoB342
ClCG03G003830	CSPI01G09620	Wild cucumber (PI 183967)	cpiwcgB038
ClCG03G003830	Cucsa.392140	Cucumber (Gy14) v1	cgywcgB669
ClCG03G003830	CmaCh18G003130	Cucurbita maxima (Rimu)	cmawcgB358
ClCG03G003830	CmoCh18G002230	Cucurbita moschata (Rifu)	cmowcgB350
ClCG03G003830	Lsi02G005110	Bottle gourd (USVL1VR-Ls)	lsiwcgB184
ClCG03G003830	Cp4.1LG09g09640	Cucurbita pepo (Zucchini)	cpewcgB036
ClCG03G003830	CsGy1G009670	Cucumber (Gy14) v2	cgybwcgB033
ClCG03G003830	MELO3C002367.2	Melon (DHL92) v3.6.1	medwcgB144
ClCG03G003830	Carg06801	Silver-seed gourd	carwcgB0480
ClCG03G003830	CsaV3_1G009730	Cucumber (Chinese Long) v3	cucwcgB038

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG03G003830	Cucurbita pepo (Zucchini)	cpewcgB325
ClCG03G003830	Cucurbita pepo (Zucchini)	cpewcgB469
ClCG03G003830	Cucurbita pepo (Zucchini)	cpewcgB602
ClCG03G003830	Bottle gourd (USVL1VR-Ls)	lsiwcgB363
ClCG03G003830	Cucumber (Gy14) v2	cgybwcgB048
ClCG03G003830	Melon (DHL92) v3.6.1	medwcgB236
ClCG03G003830	Silver-seed gourd	carwcgB0356
ClCG03G003830	Silver-seed gourd	carwcgB0980
ClCG03G003830	Cucumber (Chinese Long) v3	cucwcgB056
ClCG03G003830	Watermelon (97103) v2	wcgwmbB191
ClCG03G003830	Watermelon (Charleston Gray)	wcgwcgB144
ClCG03G003830	Cucumber (Gy14) v1	cgywcgB262
ClCG03G003830	Cucurbita maxima (Rimu)	cmawcgB061
ClCG03G003830	Cucurbita maxima (Rimu)	cmawcgB116
ClCG03G003830	Cucurbita maxima (Rimu)	cmawcgB196
ClCG03G003830	Cucurbita moschata (Rifu)	cmowcgB053
ClCG03G003830	Cucurbita moschata (Rifu)	cmowcgB105
ClCG03G003830	Cucurbita moschata (Rifu)	cmowcgB186
ClCG03G003830	Wild cucumber (PI 183967)	cpiwcgB053
ClCG03G003830	Cucumber (Chinese Long) v2	cuwcgB052
ClCG03G003830	Melon (DHL92) v3.5.1	mewcgB244
ClCG03G003830	Watermelon (97103) v1	wcgwmB249