ClCG01G007500 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G007500
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Response regulator 6
Location	CG_Chr01 : 8524868 .. 8525907 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCGCACAGCCTTTTAAGCCTTTACGAAAAGGTCAGAACAAGGGCACGGCTGCTCGAAAATCAACAAACATTTTTCAATTCCCAAATCGATTAAAAGTATTGGTCAAGAGTCGCCCCGTCTAAACCAAATCAACCTTCAAGATCCTCTCGATTCCGAATCAAATCTGTCGGATCTCACTTTCCAACTGTCACATTTCAAGATTTTCCCCTCTATGGAATCAATCCATAGATATAAAACTCCCCCAATCCCTTTCCCCTTCTACAAATTCAATCTTCTTCTTCTCTTCTTCTTCGTTTCGTAGCTATGGTTGTTGCTCTTGAAACCACCCGATTCCATGTTCTTGCTGTCGATGATAGCTTCATCGATAGGAAGTTGATTGAACGCCTCCTCAAAACCTCTTCCTATCATGGTATTTCACCATTTCACTCTCTCTTTTTCTTTTAATATCATTATTCCCGGATTTAGGGCTAATCGATTGTGTTTGATTAGTTACTGCAGTTGATTCCGGTACGAAGGCCTTGGAATTTCTTGGTCTTGTTGAAGATCATGATCACGATGAAGAAACAGACTCCAAAATCGCTCCCTCAAATCATCATCATGAAGTACGATCCCTAATTCTCTATATGTTTCTCTGTTTCTCAGGATTTACTCTTCCTTTCTTTCTTTCTCTAACTTGCATCTTCTCGATTATTTAGGAAGTGGATGTAAATTTGATCATCACGGATTACAGTATGCCTGGAATGAGTGGTTACGAACTCCTTAGGAAGATCAAGGTTTGCCCTAATTTCCAACCAATTTCCTCTTTCTCCATTGCGAAACTCGAATCCACTGAGATATTAATCACTACCGTGTAATTTTGCAGGAATCGAAATCTCTCAAAGACATACCAGTTGTGATTATGTCCTCTGAGAATGTTCCTTCAAGAATCAATAGATGCTTGGAAGAAGGAGCGGAAGAATTCTTCCTCAAACCAGTTCAATTGTCTGATGTGAGGAAGTTGAGACCTCATTTGATTAAAGAAAAATCCGCCAGGAATTGA

mRNA sequence

ACCGCACAGCCTTTTAAGCCTTTACGAAAAGGTCAGAACAAGGGCACGGCTGCTCGAAAATCAACAAACATTTTTCAATTCCCAAATCGATTAAAAGTATTGGTCAAGAGTCGCCCCGTCTAAACCAAATCAACCTTCAAGATCCTCTCGATTCCGAATCAAATCTGTCGGATCTCACTTTCCAACTGTCACATTTCAAGATTTTCCCCTCTATGGAATCAATCCATAGATATAAAACTCCCCCAATCCCTTTCCCCTTCTACAAATTCAATCTTCTTCTTCTCTTCTTCTTCGTTTCGTAGCTATGGTTGTTGCTCTTGAAACCACCCGATTCCATGTTCTTGCTGTCGATGATAGCTTCATCGATAGGAAGTTGATTGAACGCCTCCTCAAAACCTCTTCCTATCATGTTGATTCCGGTACGAAGGCCTTGGAATTTCTTGGTCTTGTTGAAGATCATGATCACGATGAAGAAACAGACTCCAAAATCGCTCCCTCAAATCATCATCATGAAGAAGTGGATGTAAATTTGATCATCACGGATTACAGTATGCCTGGAATGAGTGGTTACGAACTCCTTAGGAAGATCAAGGAATCGAAATCTCTCAAAGACATACCAGTTGTGATTATGTCCTCTGAGAATGTTCCTTCAAGAATCAATAGATGCTTGGAAGAAGGAGCGGAAGAATTCTTCCTCAAACCAGTTCAATTGTCTGATGTGAGGAAGTTGAGACCTCATTTGATTAAAGAAAAATCCGCCAGGAATTGA

Coding sequence (CDS)

ATGGTTGTTGCTCTTGAAACCACCCGATTCCATGTTCTTGCTGTCGATGATAGCTTCATCGATAGGAAGTTGATTGAACGCCTCCTCAAAACCTCTTCCTATCATGTTGATTCCGGTACGAAGGCCTTGGAATTTCTTGGTCTTGTTGAAGATCATGATCACGATGAAGAAACAGACTCCAAAATCGCTCCCTCAAATCATCATCATGAAGAAGTGGATGTAAATTTGATCATCACGGATTACAGTATGCCTGGAATGAGTGGTTACGAACTCCTTAGGAAGATCAAGGAATCGAAATCTCTCAAAGACATACCAGTTGTGATTATGTCCTCTGAGAATGTTCCTTCAAGAATCAATAGATGCTTGGAAGAAGGAGCGGAAGAATTCTTCCTCAAACCAGTTCAATTGTCTGATGTGAGGAAGTTGAGACCTCATTTGATTAAAGAAAAATCCGCCAGGAATTGA

Protein sequence

MVVALETTRFHVLAVDDSFIDRKLIERLLKTSSYHVDSGTKALEFLGLVEDHDHDEETDSKIAPSNHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSARN

Homology

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BLAST of ClCG01G007500 vs. Swiss-Prot
Match: ORR4_ORYSI (Two-component response regulator ORR4 OS=Oryza sativa subsp. indica GN=RR4 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.9e-49
Identity = 101/153 (66.01%), Postives = 120/153 (78.43%), Query Frame = 1


Query: 1   MVVALETTRFHVLAVDDSFIDRKLIERLLKTSSYH---VDSGTKALEFLGLVEDHDHDEE 60
           M V    +RFHVLAVDDS IDRKLIE LLK SSY    VDSG+KALE LGL ++ D    
Sbjct: 1   MTVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSS 60

Query: 61  TDSKIAPSNHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSR 120
           + S  +P    H+E+DVNLIITDY MPGM+GY+LL+++K S SLKDIPVVIMSSENVP+R
Sbjct: 61  SPSSSSPD---HQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPAR 120

Query: 121 INRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 151
           INRCLE+GAEEFFLKPV+L+D++KL+ HL+K K
Sbjct: 121 INRCLEDGAEEFFLKPVKLADMKKLKSHLLKRK 150

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BLAST of ClCG01G007500 vs. Swiss-Prot
Match: ORR4_ORYSJ (Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica GN=RR4 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.9e-49
Identity = 101/153 (66.01%), Postives = 120/153 (78.43%), Query Frame = 1


Query: 1   MVVALETTRFHVLAVDDSFIDRKLIERLLKTSSYH---VDSGTKALEFLGLVEDHDHDEE 60
           M V    +RFHVLAVDDS IDRKLIE LLK SSY    VDSG+KALE LGL ++ D    
Sbjct: 1   MTVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSS 60

Query: 61  TDSKIAPSNHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSR 120
           + S  +P    H+E+DVNLIITDY MPGM+GY+LL+++K S SLKDIPVVIMSSENVP+R
Sbjct: 61  SPSSSSPD---HQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPAR 120

Query: 121 INRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 151
           INRCLE+GAEEFFLKPV+L+D++KL+ HL+K K
Sbjct: 121 INRCLEDGAEEFFLKPVKLADMKKLKSHLLKRK 150

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BLAST of ClCG01G007500 vs. Swiss-Prot
Match: ORR10_ORYSJ (Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica GN=RR10 PE=2 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 3.2e-48
Identity = 105/153 (68.63%), Postives = 123/153 (80.39%), Query Frame = 1


Query: 1   MVVALETTRFHVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEE 60
           M VA+E   FHVLAVDDS  DRKLIERLLKTSS+ V   DSG+KALEFLGL   HDH+  
Sbjct: 1   MAVAIEAP-FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL---HDHE-- 60

Query: 61  TDSKIAPSNHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSR 120
            DS I+  +   +EV VNLIITDY MPGM+GY+LL+KIKES  L+DIPVVIMSS+N+PSR
Sbjct: 61  -DSPISTQSDQ-QEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSR 120

Query: 121 INRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 151
           INRCLEEGA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 INRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]

BLAST of ClCG01G007500 vs. Swiss-Prot
Match: ORR10_ORYSI (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica GN=RR10 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.2e-48
Identity = 105/153 (68.63%), Postives = 123/153 (80.39%), Query Frame = 1


Query: 1   MVVALETTRFHVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEE 60
           M VA+E   FHVLAVDDS  DRKLIERLLKTSS+ V   DSG+KALEFLGL   HDH+  
Sbjct: 1   MAVAIEAP-FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL---HDHE-- 60

Query: 61  TDSKIAPSNHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSR 120
            DS I+  +   +EV VNLIITDY MPGM+GY+LL+KIKES  L+DIPVVIMSS+N+PSR
Sbjct: 61  -DSPISTQSDQ-QEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSR 120

Query: 121 INRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 151
           INRCLEEGA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 INRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]

BLAST of ClCG01G007500 vs. Swiss-Prot
Match: ORR9_ORYSI (Two-component response regulator ORR9 OS=Oryza sativa subsp. indica GN=RR9 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.2e-48
Identity = 105/153 (68.63%), Postives = 123/153 (80.39%), Query Frame = 1


Query: 1   MVVALETTRFHVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEE 60
           M VA+E   FHVLAVDDS  DRKLIERLLKTSS+ V   DSG+KALEFLGL   HDH+  
Sbjct: 1   MAVAIEAP-FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL---HDHE-- 60

Query: 61  TDSKIAPSNHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSR 120
            DS I+  +   +EV VNLIITDY MPGM+GY+LL+KIKES  L+DIPVVIMSS+N+PSR
Sbjct: 61  -DSPISTQSDQ-QEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSR 120

Query: 121 INRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 151
           INRCLEEGA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 INRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

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BLAST of ClCG01G007500 vs. TrEMBL
Match: A0A0A0KQE6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G434550 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 8.8e-69
Identity = 141/158 (89.24%), Postives = 147/158 (93.04%), Query Frame = 1


Query: 1   MVVALETTRFHVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEE 60
           MVVA+E+T FHVLAVDDSFIDRKLIERLLKTSSYHV   DSGTKALEFLGLV+ HD  ++
Sbjct: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHD--QQ 60

Query: 61  TDSKIAPS-NHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPS 120
           TDSKIAP  NHHH+EVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPS
Sbjct: 61  TDSKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPS 120

Query: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSARN 155
           RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKS  N
Sbjct: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 156

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BLAST of ClCG01G007500 vs. TrEMBL
Match: A0A067KWD7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24525 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.2e-54
Identity = 114/146 (78.08%), Postives = 127/146 (86.99%), Query Frame = 1


Query: 9   RFHVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEETDSKIAPS 68
           +FHVLAVDDS IDRKLIERLLKTSSYHV   DSG+KALEFLGL E+   D    S ++P 
Sbjct: 8   QFHVLAVDDSLIDRKLIERLLKTSSYHVTAVDSGSKALEFLGLNEEEQIDSNLTS-VSPP 67

Query: 69  NHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEG 128
             HH++V+VNLIITDY MPGM+GY+LLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEG
Sbjct: 68  GDHHQDVEVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEG 127

Query: 129 AEEFFLKPVQLSDVRKLRPHLIKEKS 152
           AEEFFLKPVQLSDV KL+PHL+K K+
Sbjct: 128 AEEFFLKPVQLSDVNKLKPHLMKGKA 152

[Close]

BLAST of ClCG01G007500 vs. TrEMBL
Match: B9RGB1_RICCO (Two-component response regulator ARR8, putative OS=Ricinus communis GN=RCOM_1452640 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.6e-54
Identity = 111/157 (70.70%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 8   TRFHVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEETDSK--- 67
           ++FHVLAVDDS IDRKLIERLLKTSS+HV   DSG+KALEFLGL E+ + +EE + +   
Sbjct: 7   SQFHVLAVDDSLIDRKLIERLLKTSSFHVTAVDSGSKALEFLGLNEEEEEEEEEEERRDS 66

Query: 68  ----IAPSNHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSR 127
               + P + HH+++ VNLIITDY MPGM+GY+LLRKIKESKS KDIPVVIMSSENVPSR
Sbjct: 67  SPISVCPDDEHHQDLQVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSR 126

Query: 128 INRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSARN 155
           INRCLEEGAEEFFLKPVQLSDV KL+PH++K K+  N
Sbjct: 127 INRCLEEGAEEFFLKPVQLSDVNKLKPHMMKGKTREN 163

[Close]

BLAST of ClCG01G007500 vs. TrEMBL
Match: B9GWX3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s19710g PE=4 SV=2)

HSP 1 Score: 214.9 bits (546), Expect = 6.7e-53
Identity = 108/144 (75.00%), Postives = 124/144 (86.11%), Query Frame = 1


Query: 8   TRFHVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEETDSKIAP 67
           T+FHVLAVDDS IDRKLIERLLKTSSY V   DSG+KALEFLGL  D +  +   S ++P
Sbjct: 11  TQFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLSGDDEQRDSNPSSVSP 70

Query: 68  SNHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEE 127
            +HHH+ +++N+IITDY MPGM+GY+LL+KIKESK  KDIPVVIMSSENVPSRINRCLEE
Sbjct: 71  -DHHHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCLEE 130

Query: 128 GAEEFFLKPVQLSDVRKLRPHLIK 149
           GAEEFFLKPVQLSDV KLRPHL+K
Sbjct: 131 GAEEFFLKPVQLSDVNKLRPHLMK 153

[Close]

BLAST of ClCG01G007500 vs. TrEMBL
Match: E3Q1G4_POPCA (Putative A-type response regulator 4 OS=Populus canadensis GN=dkRR4 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 8.8e-53
Identity = 108/144 (75.00%), Postives = 124/144 (86.11%), Query Frame = 1


Query: 8   TRFHVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEETDSKIAP 67
           T+FHVLAVDDS IDRKLIERLLKTSSY V   DSG+KALEFLGL  D +  +   S ++P
Sbjct: 11  TQFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLHGDDEQRDSNPSSVSP 70

Query: 68  SNHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEE 127
            +HHH+ +++N+IITDY MPGM+GY+LL+KIKESK  KDIPVVIMSSENVPSRINRCLEE
Sbjct: 71  -DHHHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCLEE 130

Query: 128 GAEEFFLKPVQLSDVRKLRPHLIK 149
           GAEEFFLKPVQLSDV KLRPHL+K
Sbjct: 131 GAEEFFLKPVQLSDVNKLRPHLMK 153

[Close]

BLAST of ClCG01G007500 vs. TAIR10
Match: AT3G57040.1 (AT3G57040.1 response regulator 9)

HSP 1 Score: 186.8 bits (473), Expect = 1.0e-47
Identity = 96/146 (65.75%), Postives = 117/146 (80.14%), Query Frame = 1


Query: 8   TRFHVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEETDSKIAP 67
           ++FHVLAVDDS  DRKLIERLL+ SS  V   DSG+KALEFLGL +  D ++      AP
Sbjct: 7   SQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAP 66

Query: 68  SNHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEE 127
            NH  + V+VNLIITDY MPGM+GY+LL+K+KES + +DIPVVIMSSENVP+RI+RCLEE
Sbjct: 67  VNH--QVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEE 126

Query: 128 GAEEFFLKPVQLSDVRKLRPHLIKEK 151
           GAEEFFLKPV+L+D+ KL+PH++K K
Sbjct: 127 GAEEFFLKPVRLADLNKLKPHMMKTK 150

[Close]

BLAST of ClCG01G007500 vs. TAIR10
Match: AT2G41310.1 (AT2G41310.1 response regulator 3)

HSP 1 Score: 183.0 bits (463), Expect = 1.4e-46
Identity = 96/153 (62.75%), Postives = 123/153 (80.39%), Query Frame = 1


Query: 3   VALET-TRFHVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGL-VEDHDHDEE 62
           + +ET ++FHVLAVDDS  DRK+IERLL+ SS  V   DSG+KALEFLGL V+D+D    
Sbjct: 1   MVMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDND---- 60

Query: 63  TDSKIAPSNHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSR 122
             + ++ S   H+EV++NLIITDY MPGM+GY+LL+K+KES + + IPVVIMSSENVP+R
Sbjct: 61  -PNALSTSPQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPAR 120

Query: 123 INRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 151
           I+RCLEEGAEEFFLKPV+L+D+ KL+PH++K K
Sbjct: 121 ISRCLEEGAEEFFLKPVKLADLTKLKPHMMKTK 148

[Close]

BLAST of ClCG01G007500 vs. TAIR10
Match: AT3G48100.1 (AT3G48100.1 response regulator 5)

HSP 1 Score: 157.5 bits (397), Expect = 6.5e-39
Identity = 86/149 (57.72%), Postives = 111/149 (74.50%), Query Frame = 1


Query: 11  HVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEETDSKIAPSNH 70
           HVLAVDDS +DRK IERLL+ SS  V   DS T+AL++LGL      D E +S +     
Sbjct: 26  HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL------DGENNSSVG---- 85

Query: 71  HHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAE 130
             E++ +NLI+TDYSMPGM+GYELL+KIKES + ++IPVVIMSSEN+  RI+RCLEEGAE
Sbjct: 86  -FEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAE 145

Query: 131 EFFLKPVQLSDVRKLRPHLIK--EKSARN 155
           +F LKPV+L+DV++LR  L+K  E++ +N
Sbjct: 146 DFLLKPVKLADVKRLRDSLMKAEERAFKN 163

[Close]

BLAST of ClCG01G007500 vs. TAIR10
Match: AT5G62920.1 (AT5G62920.1 response regulator 6)

HSP 1 Score: 154.5 bits (389), Expect = 5.5e-38
Identity = 84/141 (59.57%), Postives = 106/141 (75.18%), Query Frame = 1


Query: 11  HVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEETDSKIAPSNH 70
           HVLAVDDS +DRK IERLL+ SS  V   DS T+AL++LGL    D +E++         
Sbjct: 26  HVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGL----DVEEKSVG------- 85

Query: 71  HHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAE 130
             E++ VNLI+TDYSMPGM+GYELL+KIKES + +++PVVIMSSEN+  RI+RCLEEGAE
Sbjct: 86  -FEDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAE 145

Query: 131 EFFLKPVQLSDVRKLRPHLIK 149
           +F LKPV+LSDV++LR  L+K
Sbjct: 146 DFLLKPVKLSDVKRLRDSLMK 154

[Close]

BLAST of ClCG01G007500 vs. TAIR10
Match: AT1G59940.1 (AT1G59940.1 response regulator 3)

HSP 1 Score: 154.1 bits (388), Expect = 7.2e-38
Identity = 84/148 (56.76%), Postives = 109/148 (73.65%), Query Frame = 1


Query: 5   LETTRFHVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEETDSK 64
           L++ + HVLAVDDS +DR +IERLL+ +S  V   DSG +ALEFLGL +D    E     
Sbjct: 28  LDSDQVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVE----- 87

Query: 65  IAPSNHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRC 124
                   + + V+LIITDY MPGM+GYELL+KIKES S K++PVVIMSSENV +RI+RC
Sbjct: 88  -------FDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRC 147

Query: 125 LEEGAEEFFLKPVQLSDVRKLRPHLIKE 150
           LEEGAE+F LKPV+L+DV++LR +L ++
Sbjct: 148 LEEGAEDFLLKPVKLADVKRLRSYLTRD 163

[Close]

BLAST of ClCG01G007500 vs. NCBI nr
Match: gi|659072511|ref|XP_008465907.1| (PREDICTED: two-component response regulator ARR9-like [Cucumis melo])

HSP 1 Score: 276.2 bits (705), Expect = 3.5e-71
Identity = 143/157 (91.08%), Postives = 148/157 (94.27%), Query Frame = 1


Query: 1   MVVALETTRFHVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEE 60
           MVVALE+T FHVLAVDDSFIDRKLIERLLKTSSYHV   DSGTKALEFLGLV+DHD  ++
Sbjct: 1   MVVALESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQDHD--QQ 60

Query: 61  TDSKIAPSNHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSR 120
           TDSKIAP NHHH+EVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSR
Sbjct: 61  TDSKIAPENHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSR 120

Query: 121 INRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSARN 155
           INRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKS  N
Sbjct: 121 INRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 155

[Close]

BLAST of ClCG01G007500 vs. NCBI nr
Match: gi|449445057|ref|XP_004140290.1| (PREDICTED: two-component response regulator ARR9-like [Cucumis sativus])

HSP 1 Score: 267.7 bits (683), Expect = 1.3e-68
Identity = 141/158 (89.24%), Postives = 147/158 (93.04%), Query Frame = 1


Query: 1   MVVALETTRFHVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEE 60
           MVVA+E+T FHVLAVDDSFIDRKLIERLLKTSSYHV   DSGTKALEFLGLV+ HD  ++
Sbjct: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHD--QQ 60

Query: 61  TDSKIAPS-NHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPS 120
           TDSKIAP  NHHH+EVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPS
Sbjct: 61  TDSKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPS 120

Query: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSARN 155
           RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKS  N
Sbjct: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 156

[Close]

BLAST of ClCG01G007500 vs. NCBI nr
Match: gi|643733683|gb|KDP40526.1| (hypothetical protein JCGZ_24525 [Jatropha curcas])

HSP 1 Score: 220.7 bits (561), Expect = 1.8e-54
Identity = 114/146 (78.08%), Postives = 127/146 (86.99%), Query Frame = 1


Query: 9   RFHVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEETDSKIAPS 68
           +FHVLAVDDS IDRKLIERLLKTSSYHV   DSG+KALEFLGL E+   D    S ++P 
Sbjct: 8   QFHVLAVDDSLIDRKLIERLLKTSSYHVTAVDSGSKALEFLGLNEEEQIDSNLTS-VSPP 67

Query: 69  NHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEG 128
             HH++V+VNLIITDY MPGM+GY+LLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEG
Sbjct: 68  GDHHQDVEVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEG 127

Query: 129 AEEFFLKPVQLSDVRKLRPHLIKEKS 152
           AEEFFLKPVQLSDV KL+PHL+K K+
Sbjct: 128 AEEFFLKPVQLSDVNKLKPHLMKGKA 152

[Close]

BLAST of ClCG01G007500 vs. NCBI nr
Match: gi|255544001|ref|XP_002513063.1| (PREDICTED: two-component response regulator ARR9 [Ricinus communis])

HSP 1 Score: 220.3 bits (560), Expect = 2.3e-54
Identity = 111/157 (70.70%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 8   TRFHVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEETDSK--- 67
           ++FHVLAVDDS IDRKLIERLLKTSS+HV   DSG+KALEFLGL E+ + +EE + +   
Sbjct: 7   SQFHVLAVDDSLIDRKLIERLLKTSSFHVTAVDSGSKALEFLGLNEEEEEEEEEEERRDS 66

Query: 68  ----IAPSNHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSR 127
               + P + HH+++ VNLIITDY MPGM+GY+LLRKIKESKS KDIPVVIMSSENVPSR
Sbjct: 67  SPISVCPDDEHHQDLQVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSR 126

Query: 128 INRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSARN 155
           INRCLEEGAEEFFLKPVQLSDV KL+PH++K K+  N
Sbjct: 127 INRCLEEGAEEFFLKPVQLSDVNKLKPHMMKGKTREN 163

[Close]

BLAST of ClCG01G007500 vs. NCBI nr
Match: gi|566163595|ref|XP_002304795.2| (hypothetical protein POPTR_0003s19710g [Populus trichocarpa])

HSP 1 Score: 214.9 bits (546), Expect = 9.7e-53
Identity = 108/144 (75.00%), Postives = 124/144 (86.11%), Query Frame = 1


Query: 8   TRFHVLAVDDSFIDRKLIERLLKTSSYHV---DSGTKALEFLGLVEDHDHDEETDSKIAP 67
           T+FHVLAVDDS IDRKLIERLLKTSSY V   DSG+KALEFLGL  D +  +   S ++P
Sbjct: 11  TQFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLSGDDEQRDSNPSSVSP 70

Query: 68  SNHHHEEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEE 127
            +HHH+ +++N+IITDY MPGM+GY+LL+KIKESK  KDIPVVIMSSENVPSRINRCLEE
Sbjct: 71  -DHHHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCLEE 130

Query: 128 GAEEFFLKPVQLSDVRKLRPHLIK 149
           GAEEFFLKPVQLSDV KLRPHL+K
Sbjct: 131 GAEEFFLKPVQLSDVNKLRPHLMK 153

The following BLAST results are available for this feature:

BLAST of ClCG01G007500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ORR4_ORYSI	2.9e-49	66.01	Two-component response regulator ORR4 OS=Oryza sativa subsp. indica GN=RR4 PE=2 ...	[more]
ORR4_ORYSJ	2.9e-49	66.01	Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica GN=RR4 PE=...	[more]
ORR10_ORYSJ	3.2e-48	68.63	Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica GN=RR10 P...	[more]
ORR10_ORYSI	3.2e-48	68.63	Two-component response regulator ORR10 OS=Oryza sativa subsp. indica GN=RR10 PE=...	[more]
ORR9_ORYSI	4.2e-48	68.63	Two-component response regulator ORR9 OS=Oryza sativa subsp. indica GN=RR9 PE=2 ...	[more]

BLAST of ClCG01G007500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQE6_CUCSA	8.8e-69	89.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G434550 PE=4 SV=1	[more]
A0A067KWD7_JATCU	1.2e-54	78.08	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24525 PE=4 SV=1	[more]
B9RGB1_RICCO	1.6e-54	70.70	Two-component response regulator ARR8, putative OS=Ricinus communis GN=RCOM_1452...	[more]
B9GWX3_POPTR	6.7e-53	75.00	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s19710g PE=4 SV=2	[more]
E3Q1G4_POPCA	8.8e-53	75.00	Putative A-type response regulator 4 OS=Populus canadensis GN=dkRR4 PE=2 SV=1	[more]

BLAST of ClCG01G007500 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57040.1	1.0e-47	65.75	response regulator 9	[more]
AT2G41310.1	1.4e-46	62.75	response regulator 3	[more]
AT3G48100.1	6.5e-39	57.72	response regulator 5	[more]
AT5G62920.1	5.5e-38	59.57	response regulator 6	[more]
AT1G59940.1	7.2e-38	56.76	response regulator 3	[more]

BLAST of ClCG01G007500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072511\|ref\|XP_008465907.1\|	3.5e-71	91.08	PREDICTED: two-component response regulator ARR9-like [Cucumis melo]	[more]
gi\|449445057\|ref\|XP_004140290.1\|	1.3e-68	89.24	PREDICTED: two-component response regulator ARR9-like [Cucumis sativus]	[more]
gi\|643733683\|gb\|KDP40526.1\|	1.8e-54	78.08	hypothetical protein JCGZ_24525 [Jatropha curcas]	[more]
gi\|255544001\|ref\|XP_002513063.1\|	2.3e-54	70.70	PREDICTED: two-component response regulator ARR9 [Ricinus communis]	[more]
gi\|566163595\|ref\|XP_002304795.2\|	9.7e-53	75.00	hypothetical protein POPTR_0003s19710g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001789	Sig_transdc_resp-reg_receiver
IPR011006	CheY-like_superfamily

Vocabulary: **Biological Process**
Term	Definition
GO:0000160	phosphorelay signal transduction system

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G007500.1	ClCG01G007500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 12..141 score: 2.1
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 10..143 score: 3.5
IPR001789	Signal transduction response regulator, receiver domain	PROFILE	PS50110	RESPONSE_REGULATORY	coord: 11..147 score: 32
IPR011006	CheY-like superfamily	unknown	SSF52172	CheY-like	coord: 9..145 score: 5.69
None	No IPR available	GENE3D	G3DSA:3.40.50.2300		coord: 7..148 score: 3.5
None	No IPR available	PANTHER	PTHR26402	RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM	coord: 10..46 score: 9.5E-87coord: 70..154 score: 9.5
None	No IPR available	PANTHER	PTHR26402:SF574	SUBFAMILY NOT NAMED	coord: 10..46 score: 9.5E-87coord: 70..154 score: 9.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G007500	Csa5G434550	Cucumber (Chinese Long) v2	cuwcgB366
ClCG01G007500	MELO3C005156	Melon (DHL92) v3.5.1	mewcgB019
ClCG01G007500	Cla005891	Watermelon (97103) v1	wcgwmB143
ClCG01G007500	Cla97C01G007850	Watermelon (97103) v2	wcgwmbB089
ClCG01G007500	Bhi12G000986	Wax gourd	wcgwgoB200
ClCG01G007500	CSPI05G15450	Wild cucumber (PI 183967)	cpiwcgB381
ClCG01G007500	Cucsa.330530	Cucumber (Gy14) v1	cgywcgB567
ClCG01G007500	CmaCh15G008340	Cucurbita maxima (Rimu)	cmawcgB260
ClCG01G007500	CmaCh04G021970	Cucurbita maxima (Rimu)	cmawcgB634
ClCG01G007500	CmoCh04G022980	Cucurbita moschata (Rifu)	cmowcgB636
ClCG01G007500	CmoCh15G008650	Cucurbita moschata (Rifu)	cmowcgB248
ClCG01G007500	Lsi09G007950	Bottle gourd (USVL1VR-Ls)	lsiwcgB008
ClCG01G007500	Cp4.1LG13g06060	Cucurbita pepo (Zucchini)	cpewcgB166
ClCG01G007500	Cp4.1LG01g18980	Cucurbita pepo (Zucchini)	cpewcgB370
ClCG01G007500	CsGy5G015260	Cucumber (Gy14) v2	cgybwcgB334
ClCG01G007500	MELO3C005156.2	Melon (DHL92) v3.6.1	medwcgB018
ClCG01G007500	Carg01371	Silver-seed gourd	carwcgB0800
ClCG01G007500	Carg17731	Silver-seed gourd	carwcgB0462
ClCG01G007500	CsaV3_5G024480	Cucumber (Chinese Long) v3	cucwcgB387

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G007500	Wax gourd	wcgwgoB191