CSPI05G15450 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G15450
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Two-component response regulator
Location	Chr5 : 16409555 .. 16410635 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAATCCATTTTCTTTCTTTTTTATTATTATTATTTGGTCAATACTCCTCCCGTCTAAACCAAATCAACCTTGAAGATCCTCTCGATTCCGAATCAAATCTGTCGGATCTCACTTTCCAACTGTCACTTTTCAACATTTTCAATCTTCCTTACATATAAAAACTCCTTCAATTCCTCCTCTCCTTCCTCAAATTCAATCCCTCTTCTTCTTCTTCTTCTCCAATTCATCCTCTCTCTTTCATTCTTACCTATTTTTCAGCTATTAGCTATGGTTGTTGCTGTTGAATCCACCCCTTTCCATGTTCTTGCTGTTGATGATAGCTTCATCGATCGCAAATTGATCGAACGCCTCCTCAAAACCTCTTCCTATCATGTTACTGCTGTTGATTCCGGTACTAAGGCCTTGGAATTTCTCGGTCTTGTTCAACATCACGATCAACAAACTGACTCCAAAATCGCTCCTGATCAGAACCATCATCATCAAGTACGTTCCCTTGATTCCCTTCACTCCATTTCTCACCATTCTACTCTTTTTCTTCTTTCTTTCTCTAACTTGAATTCTGTTTTCAGGAAGTGGATGTAAATTTAATCATCACGGATTACAGTATGCCTGGAATGAGTGGCTACGAACTCCTTAGAAAAATCAAGGTTTGCCCTAATTTTTCAATTTCCTCTCTTCTCCATTGCGAAATCTGAATCATCTAATCAATCGGTTACTAATAATTGGATGCTCTGTAATTAATTTTGCAGGAATCGAAATCTCTTAAAGACATACCGGTTGTGATTATGTCATCTGAGAATGTTCCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCTGAAGAATTCTTCCTCAAACCAGTTCAATTATCTGATGTCAGGAAATTGAGACCTCATTTGATTAAAGAAAAATCCACAAACAATTGACGAAGAAAAAGAAGAACAAGAATTTCTTCAACAACTAATTTTTATTTATTTTTTATTTTAGAAATCCTGTAAAGAATTAGACCCCCAAAACTGACTTCTAGAGTTCTACACACACATTTTCTTGGGAAACTAACCCAATGTACAAATCTACTT

mRNA sequence

ATGGTTGTTGCTGTTGAATCCACCCCTTTCCATGTTCTTGCTGTTGATGATAGCTTCATCGATCGCAAATTGATCGAACGCCTCCTCAAAACCTCTTCCTATCATGTTACTGCTGTTGATTCCGGTACTAAGGCCTTGGAATTTCTCGGTCTTGTTCAACATCACGATCAACAAACTGACTCCAAAATCGCTCCTGATCAGAACCATCATCATCAAGAAGTGGATGTAAATTTAATCATCACGGATTACAGTATGCCTGGAATGAGTGGCTACGAACTCCTTAGAAAAATCAAGGAATCGAAATCTCTTAAAGACATACCGGTTGTGATTATGTCATCTGAGAATGTTCCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCTGAAGAATTCTTCCTCAAACCAGTTCAATTATCTGATGTCAGGAAATTGAGACCTCATTTGATTAAAGAAAAATCCACAAACAATTGA

Coding sequence (CDS)

ATGGTTGTTGCTGTTGAATCCACCCCTTTCCATGTTCTTGCTGTTGATGATAGCTTCATCGATCGCAAATTGATCGAACGCCTCCTCAAAACCTCTTCCTATCATGTTACTGCTGTTGATTCCGGTACTAAGGCCTTGGAATTTCTCGGTCTTGTTCAACATCACGATCAACAAACTGACTCCAAAATCGCTCCTGATCAGAACCATCATCATCAAGAAGTGGATGTAAATTTAATCATCACGGATTACAGTATGCCTGGAATGAGTGGCTACGAACTCCTTAGAAAAATCAAGGAATCGAAATCTCTTAAAGACATACCGGTTGTGATTATGTCATCTGAGAATGTTCCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCTGAAGAATTCTTCCTCAAACCAGTTCAATTATCTGATGTCAGGAAATTGAGACCTCATTTGATTAAAGAAAAATCCACAAACAATTGA

Homology

[Close]

BLAST of CSPI05G15450 vs. Swiss-Prot
Match: ORR10_ORYSJ (Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica GN=RR10 PE=2 SV=2)

HSP 1 Score: 205.7 bits (522), Expect = 3.8e-52
Identity = 107/152 (70.39%), Postives = 126/152 (82.89%), Query Frame = 1


Query: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTD 60
           M VA+E+ PFHVLAVDDS  DRKLIERLLKTSS+ VT VDSG+KALEFLGL  H D    
Sbjct: 1   MAVAIEA-PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIS 60

Query: 61  SKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI 120
           ++   DQ    QEV VNLIITDY MPGM+GY+LL+KIKES  L+DIPVVIMSS+N+PSRI
Sbjct: 61  TQ--SDQ----QEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRI 120

Query: 121 NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 153
           NRCLEEGA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 NRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]

BLAST of CSPI05G15450 vs. Swiss-Prot
Match: ORR10_ORYSI (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica GN=RR10 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.8e-52
Identity = 107/152 (70.39%), Postives = 126/152 (82.89%), Query Frame = 1


Query: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTD 60
           M VA+E+ PFHVLAVDDS  DRKLIERLLKTSS+ VT VDSG+KALEFLGL  H D    
Sbjct: 1   MAVAIEA-PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIS 60

Query: 61  SKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI 120
           ++   DQ    QEV VNLIITDY MPGM+GY+LL+KIKES  L+DIPVVIMSS+N+PSRI
Sbjct: 61  TQ--SDQ----QEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRI 120

Query: 121 NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 153
           NRCLEEGA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 NRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]

BLAST of CSPI05G15450 vs. Swiss-Prot
Match: ORR9_ORYSJ (Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica GN=RR9 PE=2 SV=2)

HSP 1 Score: 205.3 bits (521), Expect = 4.9e-52
Identity = 107/152 (70.39%), Postives = 126/152 (82.89%), Query Frame = 1


Query: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTD 60
           M VA+E+ PFHVLAVDDS  DRKLIERLLKTSS+ VT VDSG+KALEFLGL  H D    
Sbjct: 1   MAVAIEA-PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIS 60

Query: 61  SKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI 120
           ++   DQ    QEV VNLIITDY MPGM+GY+LL+KIKES  L+DIPVVIMSS+N+PSRI
Sbjct: 61  TQ--SDQ----QEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRI 120

Query: 121 NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 153
           NRCLEEGA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 NRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]

BLAST of CSPI05G15450 vs. Swiss-Prot
Match: ORR9_ORYSI (Two-component response regulator ORR9 OS=Oryza sativa subsp. indica GN=RR9 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.9e-52
Identity = 107/152 (70.39%), Postives = 126/152 (82.89%), Query Frame = 1


Query: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTD 60
           M VA+E+ PFHVLAVDDS  DRKLIERLLKTSS+ VT VDSG+KALEFLGL  H D    
Sbjct: 1   MAVAIEA-PFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIS 60

Query: 61  SKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI 120
           ++   DQ    QEV VNLIITDY MPGM+GY+LL+KIKES  L+DIPVVIMSS+N+PSRI
Sbjct: 61  TQ--SDQ----QEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRI 120

Query: 121 NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 153
           NRCLEEGA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 NRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]

BLAST of CSPI05G15450 vs. Swiss-Prot
Match: ORR4_ORYSJ (Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica GN=RR4 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.1e-51
Identity = 104/153 (67.97%), Postives = 123/153 (80.39%), Query Frame = 1


Query: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTD 60
           M V    + FHVLAVDDS IDRKLIE LLK SSY VT VDSG+KALE LGL    D+  D
Sbjct: 1   MTVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGL---RDEGDD 60

Query: 61  SKIAPDQNH-HHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSR 120
           S  +P  +   HQE+DVNLIITDY MPGM+GY+LL+++K S SLKDIPVVIMSSENVP+R
Sbjct: 61  SSSSPSSSSPDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPAR 120

Query: 121 INRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 153
           INRCLE+GAEEFFLKPV+L+D++KL+ HL+K K
Sbjct: 121 INRCLEDGAEEFFLKPVKLADMKKLKSHLLKRK 150

[Close]

BLAST of CSPI05G15450 vs. TrEMBL
Match: A0A0A0KQE6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G434550 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 1.6e-81
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1


Query: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTD 60
           MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTD
Sbjct: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTD 60

Query: 61  SKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI 120
           SKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI
Sbjct: 61  SKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI 120

Query: 121 NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 157
           NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN
Sbjct: 121 NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 156

[Close]

BLAST of CSPI05G15450 vs. TrEMBL
Match: A0A067KWD7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24525 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.3e-56
Identity = 117/146 (80.14%), Postives = 129/146 (88.36%), Query Frame = 1


Query: 10  FHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDSKI--APDQ 69
           FHVLAVDDS IDRKLIERLLKTSSYHVTAVDSG+KALEFLGL  + ++Q DS +      
Sbjct: 9   FHVLAVDDSLIDRKLIERLLKTSSYHVTAVDSGSKALEFLGL--NEEEQIDSNLTSVSPP 68

Query: 70  NHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEG 129
             HHQ+V+VNLIITDY MPGM+GY+LLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEG
Sbjct: 69  GDHHQDVEVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEG 128

Query: 130 AEEFFLKPVQLSDVRKLRPHLIKEKS 154
           AEEFFLKPVQLSDV KL+PHL+K K+
Sbjct: 129 AEEFFLKPVQLSDVNKLKPHLMKGKA 152

[Close]

BLAST of CSPI05G15450 vs. TrEMBL
Match: B9GWX3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s19710g PE=4 SV=2)

HSP 1 Score: 223.0 bits (567), Expect = 2.5e-55
Identity = 110/143 (76.92%), Postives = 124/143 (86.71%), Query Frame = 1


Query: 8   TPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDSKIAPDQ 67
           T FHVLAVDDS IDRKLIERLLKTSSY VTAVDSG+KALEFLGL    +Q+  +  +   
Sbjct: 11  TQFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLSGDDEQRDSNPSSVSP 70

Query: 68  NHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEG 127
           +HHHQ +++N+IITDY MPGM+GY+LL+KIKESK  KDIPVVIMSSENVPSRINRCLEEG
Sbjct: 71  DHHHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCLEEG 130

Query: 128 AEEFFLKPVQLSDVRKLRPHLIK 151
           AEEFFLKPVQLSDV KLRPHL+K
Sbjct: 131 AEEFFLKPVQLSDVNKLRPHLMK 153

[Close]

BLAST of CSPI05G15450 vs. TrEMBL
Match: B9RGB1_RICCO (Two-component response regulator ARR8, putative OS=Ricinus communis GN=RCOM_1452640 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.5e-55
Identity = 113/156 (72.44%), Postives = 131/156 (83.97%), Query Frame = 1


Query: 10  FHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDSK------- 69
           FHVLAVDDS IDRKLIERLLKTSS+HVTAVDSG+KALEFLGL +  +++ + +       
Sbjct: 9   FHVLAVDDSLIDRKLIERLLKTSSFHVTAVDSGSKALEFLGLNEEEEEEEEEEERRDSSP 68

Query: 70  --IAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI 129
             + PD + HHQ++ VNLIITDY MPGM+GY+LLRKIKESKS KDIPVVIMSSENVPSRI
Sbjct: 69  ISVCPD-DEHHQDLQVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRI 128

Query: 130 NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 157
           NRCLEEGAEEFFLKPVQLSDV KL+PH++K K+  N
Sbjct: 129 NRCLEEGAEEFFLKPVQLSDVNKLKPHMMKGKTREN 163

[Close]

BLAST of CSPI05G15450 vs. TrEMBL
Match: E3Q1G4_POPCA (Putative A-type response regulator 4 OS=Populus canadensis GN=dkRR4 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.3e-55
Identity = 110/143 (76.92%), Postives = 124/143 (86.71%), Query Frame = 1


Query: 8   TPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDSKIAPDQ 67
           T FHVLAVDDS IDRKLIERLLKTSSY VTAVDSG+KALEFLGL    +Q+  +  +   
Sbjct: 11  TQFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLHGDDEQRDSNPSSVSP 70

Query: 68  NHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEG 127
           +HHHQ +++N+IITDY MPGM+GY+LL+KIKESK  KDIPVVIMSSENVPSRINRCLEEG
Sbjct: 71  DHHHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCLEEG 130

Query: 128 AEEFFLKPVQLSDVRKLRPHLIK 151
           AEEFFLKPVQLSDV KLRPHL+K
Sbjct: 131 AEEFFLKPVQLSDVNKLRPHLMK 153

[Close]

BLAST of CSPI05G15450 vs. TAIR10
Match: AT3G57040.1 (AT3G57040.1 response regulator 9)

HSP 1 Score: 194.1 bits (492), Expect = 6.4e-50
Identity = 103/155 (66.45%), Postives = 122/155 (78.71%), Query Frame = 1


Query: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTD 60
           M +A ES  FHVLAVDDS  DRKLIERLL+ SS  VT VDSG+KALEFLGL Q  D   D
Sbjct: 1   MGMAAESQ-FHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSN-D 60

Query: 61  SKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI 120
                    +HQ V+VNLIITDY MPGM+GY+LL+K+KES + +DIPVVIMSSENVP+RI
Sbjct: 61  PNAFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARI 120

Query: 121 NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTN 156
           +RCLEEGAEEFFLKPV+L+D+ KL+PH++K K  N
Sbjct: 121 SRCLEEGAEEFFLKPVRLADLNKLKPHMMKTKLKN 153

[Close]

BLAST of CSPI05G15450 vs. TAIR10
Match: AT2G41310.1 (AT2G41310.1 response regulator 3)

HSP 1 Score: 189.1 bits (479), Expect = 2.0e-48
Identity = 98/152 (64.47%), Postives = 120/152 (78.95%), Query Frame = 1


Query: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTD 60
           MV+  ES  FHVLAVDDS  DRK+IERLL+ SS  VT VDSG+KALEFLGL    +    
Sbjct: 1   MVMETESK-FHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNA 60

Query: 61  SKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI 120
              +P     HQEV++NLIITDY MPGM+GY+LL+K+KES + + IPVVIMSSENVP+RI
Sbjct: 61  LSTSPQI---HQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARI 120

Query: 121 NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 153
           +RCLEEGAEEFFLKPV+L+D+ KL+PH++K K
Sbjct: 121 SRCLEEGAEEFFLKPVKLADLTKLKPHMMKTK 148

[Close]

BLAST of CSPI05G15450 vs. TAIR10
Match: AT5G62920.1 (AT5G62920.1 response regulator 6)

HSP 1 Score: 166.0 bits (419), Expect = 1.9e-41
Identity = 84/142 (59.15%), Postives = 109/142 (76.76%), Query Frame = 1


Query: 9   PFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDSKIAPDQN 68
           P HVLAVDDS +DRK IERLL+ SS  VT VDS T+AL++LGL              +++
Sbjct: 24  PLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLD-----------VEEKS 83

Query: 69  HHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGA 128
              +++ VNLI+TDYSMPGM+GYELL+KIKES + +++PVVIMSSEN+  RI+RCLEEGA
Sbjct: 84  VGFEDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGA 143

Query: 129 EEFFLKPVQLSDVRKLRPHLIK 151
           E+F LKPV+LSDV++LR  L+K
Sbjct: 144 EDFLLKPVKLSDVKRLRDSLMK 154

[Close]

BLAST of CSPI05G15450 vs. TAIR10
Match: AT3G48100.1 (AT3G48100.1 response regulator 5)

HSP 1 Score: 166.0 bits (419), Expect = 1.9e-41
Identity = 84/140 (60.00%), Postives = 110/140 (78.57%), Query Frame = 1


Query: 11  HVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDSKIAPDQNHH 70
           HVLAVDDS +DRK IERLL+ SS  VT VDS T+AL++LGL    D + +S +       
Sbjct: 26  HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL----DGENNSSVG------ 85

Query: 71  HQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEE 130
            +++ +NLI+TDYSMPGM+GYELL+KIKES + ++IPVVIMSSEN+  RI+RCLEEGAE+
Sbjct: 86  FEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAED 145

Query: 131 FFLKPVQLSDVRKLRPHLIK 151
           F LKPV+L+DV++LR  L+K
Sbjct: 146 FLLKPVKLADVKRLRDSLMK 155

[Close]

BLAST of CSPI05G15450 vs. TAIR10
Match: AT1G59940.1 (AT1G59940.1 response regulator 3)

HSP 1 Score: 166.0 bits (419), Expect = 1.9e-41
Identity = 88/147 (59.86%), Postives = 112/147 (76.19%), Query Frame = 1


Query: 5   VESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDSKIA 64
           ++S   HVLAVDDS +DR +IERLL+ +S  VTAVDSG +ALEFLGL        D K A
Sbjct: 28  LDSDQVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGL-------DDDKAA 87

Query: 65  PDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCL 124
            +       + V+LIITDY MPGM+GYELL+KIKES S K++PVVIMSSENV +RI+RCL
Sbjct: 88  VE----FDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCL 147

Query: 125 EEGAEEFFLKPVQLSDVRKLRPHLIKE 152
           EEGAE+F LKPV+L+DV++LR +L ++
Sbjct: 148 EEGAEDFLLKPVKLADVKRLRSYLTRD 163

[Close]

BLAST of CSPI05G15450 vs. NCBI nr
Match: gi|449445057|ref|XP_004140290.1| (PREDICTED: two-component response regulator ARR9-like [Cucumis sativus])

HSP 1 Score: 310.1 bits (793), Expect = 2.3e-81
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1


Query: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTD 60
           MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTD
Sbjct: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTD 60

Query: 61  SKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI 120
           SKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI
Sbjct: 61  SKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI 120

Query: 121 NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 157
           NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN
Sbjct: 121 NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 156

[Close]

BLAST of CSPI05G15450 vs. NCBI nr
Match: gi|659072511|ref|XP_008465907.1| (PREDICTED: two-component response regulator ARR9-like [Cucumis melo])

HSP 1 Score: 297.7 bits (761), Expect = 1.2e-77
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTD 60
           MVVA+ESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQ HDQQTD
Sbjct: 1   MVVALESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQDHDQQTD 60

Query: 61  SKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI 120
           SKIAP+ NHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI
Sbjct: 61  SKIAPE-NHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRI 120

Query: 121 NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 157
           NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN
Sbjct: 121 NRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 155

[Close]

BLAST of CSPI05G15450 vs. NCBI nr
Match: gi|643733683|gb|KDP40526.1| (hypothetical protein JCGZ_24525 [Jatropha curcas])

HSP 1 Score: 226.5 bits (576), Expect = 3.3e-56
Identity = 117/146 (80.14%), Postives = 129/146 (88.36%), Query Frame = 1


Query: 10  FHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDSKI--APDQ 69
           FHVLAVDDS IDRKLIERLLKTSSYHVTAVDSG+KALEFLGL  + ++Q DS +      
Sbjct: 9   FHVLAVDDSLIDRKLIERLLKTSSYHVTAVDSGSKALEFLGL--NEEEQIDSNLTSVSPP 68

Query: 70  NHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEG 129
             HHQ+V+VNLIITDY MPGM+GY+LLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEG
Sbjct: 69  GDHHQDVEVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEG 128

Query: 130 AEEFFLKPVQLSDVRKLRPHLIKEKS 154
           AEEFFLKPVQLSDV KL+PHL+K K+
Sbjct: 129 AEEFFLKPVQLSDVNKLKPHLMKGKA 152

[Close]

BLAST of CSPI05G15450 vs. NCBI nr
Match: gi|743817363|ref|XP_011020390.1| (PREDICTED: two-component response regulator ARR8-like [Populus euphratica])

HSP 1 Score: 223.8 bits (569), Expect = 2.1e-55
Identity = 114/144 (79.17%), Postives = 126/144 (87.50%), Query Frame = 1


Query: 8   TPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDSKIAP-D 67
           T FHVLAVDDS IDRKLIERLLKTSSY VTAVDSG+KALEFLGL    D+Q DS  +P  
Sbjct: 11  TQFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGL-NGDDEQRDSNPSPVS 70

Query: 68  QNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEE 127
            +HHHQ +++N+IITDY MPGM+GY+LL+KIKESK  KDIPVVIMSSENVPSRINRCLEE
Sbjct: 71  PDHHHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCLEE 130

Query: 128 GAEEFFLKPVQLSDVRKLRPHLIK 151
           GAEEFFLKPVQLSDV KLRPHL+K
Sbjct: 131 GAEEFFLKPVQLSDVNKLRPHLMK 153

[Close]

BLAST of CSPI05G15450 vs. NCBI nr
Match: gi|694366778|ref|XP_009361964.1| (PREDICTED: two-component response regulator ARR9-like [Pyrus x bretschneideri])

HSP 1 Score: 223.8 bits (569), Expect = 2.1e-55
Identity = 114/153 (74.51%), Postives = 129/153 (84.31%), Query Frame = 1


Query: 2   VVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDS 61
           + A E+  FHVLAVDDS IDRKLIERLLKTSSY VTAVDSG+KALEFLGL +  DQ    
Sbjct: 3   LAAAEAHQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLHEQDDQGAAD 62

Query: 62  KIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRIN 121
             +   ++HHQEV+VNLIITDY MPGM+GY+LLRKIKES  LKDIPVVIMSSEN PSRIN
Sbjct: 63  IPSLSPDNHHQEVEVNLIITDYCMPGMTGYDLLRKIKESNVLKDIPVVIMSSENEPSRIN 122

Query: 122 RCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKST 155
           RCLEEGA+EFFLKPVQLSDV KLRPH++K +S+
Sbjct: 123 RCLEEGAQEFFLKPVQLSDVNKLRPHMLKGRSS 155

The following BLAST results are available for this feature:

BLAST of CSPI05G15450 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ORR10_ORYSJ	3.8e-52	70.39	Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica GN=RR10 P...	[more]
ORR10_ORYSI	3.8e-52	70.39	Two-component response regulator ORR10 OS=Oryza sativa subsp. indica GN=RR10 PE=...	[more]
ORR9_ORYSJ	4.9e-52	70.39	Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica GN=RR9 PE=...	[more]
ORR9_ORYSI	4.9e-52	70.39	Two-component response regulator ORR9 OS=Oryza sativa subsp. indica GN=RR9 PE=2 ...	[more]
ORR4_ORYSJ	4.1e-51	67.97	Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica GN=RR4 PE=...	[more]

BLAST of CSPI05G15450 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQE6_CUCSA	1.6e-81	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G434550 PE=4 SV=1	[more]
A0A067KWD7_JATCU	2.3e-56	80.14	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24525 PE=4 SV=1	[more]
B9GWX3_POPTR	2.5e-55	76.92	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s19710g PE=4 SV=2	[more]
B9RGB1_RICCO	2.5e-55	72.44	Two-component response regulator ARR8, putative OS=Ricinus communis GN=RCOM_1452...	[more]
E3Q1G4_POPCA	3.3e-55	76.92	Putative A-type response regulator 4 OS=Populus canadensis GN=dkRR4 PE=2 SV=1	[more]

BLAST of CSPI05G15450 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57040.1	6.4e-50	66.45	response regulator 9	[more]
AT2G41310.1	2.0e-48	64.47	response regulator 3	[more]
AT5G62920.1	1.9e-41	59.15	response regulator 6	[more]
AT3G48100.1	1.9e-41	60.00	response regulator 5	[more]
AT1G59940.1	1.9e-41	59.86	response regulator 3	[more]

BLAST of CSPI05G15450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445057\|ref\|XP_004140290.1\|	2.3e-81	100.00	PREDICTED: two-component response regulator ARR9-like [Cucumis sativus]	[more]
gi\|659072511\|ref\|XP_008465907.1\|	1.2e-77	97.44	PREDICTED: two-component response regulator ARR9-like [Cucumis melo]	[more]
gi\|643733683\|gb\|KDP40526.1\|	3.3e-56	80.14	hypothetical protein JCGZ_24525 [Jatropha curcas]	[more]
gi\|743817363\|ref\|XP_011020390.1\|	2.1e-55	79.17	PREDICTED: two-component response regulator ARR8-like [Populus euphratica]	[more]
gi\|694366778\|ref\|XP_009361964.1\|	2.1e-55	74.51	PREDICTED: two-component response regulator ARR9-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001789	Sig_transdc_resp-reg_receiver
IPR011006	CheY-like_superfamily

Vocabulary: **Biological Process**
Term	Definition
GO:0000160	phosphorelay signal transduction system

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G15450.1	CSPI05G15450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 12..143 score: 5.5
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 10..145 score: 1.5
IPR001789	Signal transduction response regulator, receiver domain	PROFILE	PS50110	RESPONSE_REGULATORY	coord: 11..149 score: 34
IPR011006	CheY-like superfamily	unknown	SSF52172	CheY-like	coord: 9..144 score: 5.41
None	No IPR available	GENE3D	G3DSA:3.40.50.2300		coord: 7..150 score: 2.1
None	No IPR available	PANTHER	PTHR26402	RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM	coord: 72..156 score: 5.1E-95coord: 10..49 score: 5.1
None	No IPR available	PANTHER	PTHR26402:SF574	SUBFAMILY NOT NAMED	coord: 72..156 score: 5.1E-95coord: 10..49 score: 5.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G15450	Cla005891	Watermelon (97103) v1	cpiwmB418
CSPI05G15450	Csa5G434550	Cucumber (Chinese Long) v2	cpicuB239
CSPI05G15450	MELO3C005156	Melon (DHL92) v3.5.1	cpimeB353
CSPI05G15450	ClCG01G007500	Watermelon (Charleston Gray)	cpiwcgB381
CSPI05G15450	Lsi09G007950	Bottle gourd (USVL1VR-Ls)	cpilsiB324
CSPI05G15450	MELO3C005156.2	Melon (DHL92) v3.6.1	cpimedB343
CSPI05G15450	CsaV3_5G024480	Cucumber (Chinese Long) v3	cpicucB284
CSPI05G15450	Cla97C01G007850	Watermelon (97103) v2	cpiwmbB351
CSPI05G15450	Bhi12G000986	Wax gourd	cpiwgoB457
CSPI05G15450	Cucsa.330530	Cucumber (Gy14) v1	cgycpiB493
CSPI05G15450	CmaCh04G021970	Cucurbita maxima (Rimu)	cmacpiB735
CSPI05G15450	CmaCh15G008340	Cucurbita maxima (Rimu)	cmacpiB308
CSPI05G15450	CmoCh15G008650	Cucurbita moschata (Rifu)	cmocpiB300
CSPI05G15450	CmoCh04G022980	Cucurbita moschata (Rifu)	cmocpiB728
CSPI05G15450	Cp4.1LG01g18980	Cucurbita pepo (Zucchini)	cpecpiB420
CSPI05G15450	Cp4.1LG13g06060	Cucurbita pepo (Zucchini)	cpecpiB181
CSPI05G15450	CsGy5G015260	Cucumber (Gy14) v2	cgybcpiB225
CSPI05G15450	Carg01371	Silver-seed gourd	carcpiB0863
CSPI05G15450	Carg17731	Silver-seed gourd	carcpiB0515

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None