Carg01371 (gene) Silver-seed gourd

Overview
NameCarg01371
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTwo-component response regulator
LocationCucurbita_argyrosperma_scaffold_004 : 496640 .. 497941 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAAAGTTTGGTGGGGGAAGAGAGGGGACCGGGCGTACCGTACTATACGACGCACACAGGGACAATACAGCTGAGCCATTGGCTGTGACGAAAAGGCCACAAACAGGGGCGCCCACGGCTGCTGCTCGAAAATCAACCAACACTTTCAATTCCCAAATCGATTAAAGAATTGGTCAGGAGAGTTCGTCTACACCAAATCAACCTTGAAGATCCTCTCGATTCCGAATCAAATCTGTCGGATCTCACTTTCCAACTGTCACATTTCAACATTTTTCCCCACTATGGAATCAATCCATAGATATATATATATATTACTCTCCAATCCCCTTTTTCCCTTACTCTCATTCAATCTTCTTCTGTTCTTTGTTTCTTTCTGTTGAATCTTCATTCTAGCTATGGGTGTTGCTGTTGAATCTACTCGATTTCATGTTCTTGCTGTTGATGATAGCTTCATCGATAGGAAATTGATCGAGCGCCTCCTCGAAACCTCGTCCTATCATGGTATTTCACGATTTCATTCGCTCTTTTGTTTTAGCATTGGAGCTTTTCTCGGATTTAGGGCTAATCAAGTGTTTGATTCTCTGTTTTGATTAGTTACTGTTGTTGATTCCGGCAACAAGGCCTTGGAATTTCTTGGTCTTGTTGGAGATCATGATGATGATGATGATGATGAACCGGACTCCCAAATCGCTCCCTCAAATCATCATCAAGTACGAGCCCTAATTCTCTCCGTCTCTCTCTCTTTTTCTCAGGATTTATCCTCCTTTCTTTCTCTAACTTGCATCTTCTCGGATCGTTTCTGTTTTCAGGAAGTGGATGTAAATTTGATCATCACGGATTACAGTATGCCTGGAATGAGCGGCTACGATCTCCTCAGGAAGATCAAGGTTCGCCCTAGCTTTTACTACTCTTCTTTCTCCATTACCATATTATTCTCAACCAAAAGAAAAAATCTCCTAAATCCACTGTGAATCAATCACTAATTTTGATGCCATGGAATTGCAGGAATCGAAATCTCTTAAAGACATACCGGTTGTGATTATGTCCTCTGAGAATGTACCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAATTCTTCCTCAAACCAGTTCAATTGTCTGACGTGAGGAAATTGAGACCTCATTTGATTAAAGAAAAATCCTCAAGGAATTGATGAACAAGAACAACGAAGAACTCCGCCACTAATTTTAATTCCGATTTTAGTCAATTCTGTAAAGAACTAGAGTTGTTCTAACCACAGATTTTCTTGGGAAACTAACAAAAATTGTATAG

mRNA sequence

GGAAAAGTTTGGTGGGGGAAGAGAGGGGACCGGGCGTACCGTACTATACGACGCACACAGGGACAATACAGCTGAGCCATTGGCTGTGACGAAAAGGCCACAAACAGGGGCGCCCACGGCTGCTGCTCGAAAATCAACCAACACTTTCAATTCCCAAATCGATTAAAGAATTGGTCAGGAGAGTTCGTCTACACCAAATCAACCTTGAAGATCCTCTCGATTCCGAATCAAATCTGTCGGATCTCACTTTCCAACTGTCACATTTCAACATTTTTCCCCACTATGGAATCAATCCATAGATATATATATATATTACTCTCCAATCCCCTTTTTCCCTTACTCTCATTCAATCTTCTTCTGTTCTTTGTTTCTTTCTGTTGAATCTTCATTCTAGCTATGGGTGTTGCTGTTGAATCTACTCGATTTCATGTTCTTGCTGTTGATGATAGCTTCATCGATAGGAAATTGATCGAGCGCCTCCTCGAAACCTCGTCCTATCATGTTACTGTTGTTGATTCCGGCAACAAGGCCTTGGAATTTCTTGGTCTTGTTGGAGATCATGATGATGATGATGATGATGAACCGGACTCCCAAATCGCTCCCTCAAATCATCATCAAGAAGTGGATGTAAATTTGATCATCACGGATTACAGTATGCCTGGAATGAGCGGCTACGATCTCCTCAGGAAGATCAAGGAATCGAAATCTCTTAAAGACATACCGGTTGTGATTATGTCCTCTGAGAATGTACCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAATTCTTCCTCAAACCAGTTCAATTGTCTGACGTGAGGAAATTGAGACCTCATTTGATTAAAGAAAAATCCTCAAGGAATTGATGAACAAGAACAACGAAGAACTCCGCCACTAATTTTAATTCCGATTTTAGTCAATTCTGTAAAGAACTAGAGTTGTTCTAACCACAGATTTTCTTGGGAAACTAACAAAAATTGTATAG

Coding sequence (CDS)

ATGGGTGTTGCTGTTGAATCTACTCGATTTCATGTTCTTGCTGTTGATGATAGCTTCATCGATAGGAAATTGATCGAGCGCCTCCTCGAAACCTCGTCCTATCATGTTACTGTTGTTGATTCCGGCAACAAGGCCTTGGAATTTCTTGGTCTTGTTGGAGATCATGATGATGATGATGATGATGAACCGGACTCCCAAATCGCTCCCTCAAATCATCATCAAGAAGTGGATGTAAATTTGATCATCACGGATTACAGTATGCCTGGAATGAGCGGCTACGATCTCCTCAGGAAGATCAAGGAATCGAAATCTCTTAAAGACATACCGGTTGTGATTATGTCCTCTGAGAATGTACCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAATTCTTCCTCAAACCAGTTCAATTGTCTGACGTGAGGAAATTGAGACCTCATTTGATTAAAGAAAAATCCTCAAGGAATTGA

Protein sequence

MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHDDDDDDEPDSQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSSRN
Homology
[Close]
BLAST of Carg01371 vs. NCBI nr
Match: XP_023550008.1 (two-component response regulator ORR4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.3 bits (721), Expect = 9.9e-73
Identity = 145/158 (91.77%), Postives = 148/158 (93.67%), Query Frame = 0 

Query: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXX 60
           MGVAVESTRFHVLAVDDSFIDRKLIERLL+TSSYHVTVVDSGNKALEFLGLVGDH     
Sbjct: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLVGDH--DDD 60

Query: 61  XXXXXQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPS 120
                +IAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPS
Sbjct: 61  DETDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPS 120

Query: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSSRN 159
           RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKS+RN
Sbjct: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 156

[Close]
BLAST of Carg01371 vs. NCBI nr
Match: XP_022938947.1 (two-component response regulator ORR4-like [Cucurbita moschata])

HSP 1 Score: 278.9 bits (712), Expect = 1.1e-71
Identity = 154/160 (96.25%), Postives = 157/160 (98.12%), Query Frame = 0 

Query: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDH--XXX 60
           MGVAVEST+FHVLAVDDSFIDRKLIERLL+TSSYHVTVVDSGNKALEFLGLVGDH  XXX
Sbjct: 1   MGVAVESTQFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLVGDHXXXXX 60

Query: 61  XXXXXXXQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENV 120
           XXXXXXX IAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENV
Sbjct: 61  XXXXXXXXIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENV 120

Query: 121 PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSSRN 159
           PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKS+RN
Sbjct: 121 PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 160

[Close]
BLAST of Carg01371 vs. NCBI nr
Match: XP_022993798.1 (two-component response regulator ORR4-like [Cucurbita maxima])

HSP 1 Score: 278.1 bits (710), Expect = 1.9e-71
Identity = 152/158 (96.20%), Postives = 156/158 (98.73%), Query Frame = 0 

Query: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXX 60
           MGVAVEST+FHVLAVDDSFIDRKLIERLL+TSSYHVTVVDSGNKALEFLGL GDH XXXX
Sbjct: 1   MGVAVESTQFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLDGDH-XXXX 60

Query: 61  XXXXXQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPS 120
           XXXXX+IAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPS
Sbjct: 61  XXXXXEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPS 120

Query: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSSRN 159
           RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKS+RN
Sbjct: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 157

[Close]
BLAST of Carg01371 vs. NCBI nr
Match: XP_008465907.1 (PREDICTED: two-component response regulator ORR10-like [Cucumis melo])

HSP 1 Score: 258.1 bits (658), Expect = 2.0e-65
Identity = 136/159 (85.53%), Postives = 141/159 (88.68%), Query Frame = 0 

Query: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXX 60
           M VA+EST FHVLAVDDSFIDRKLIERLL+TSSYHVT VDSG KALEFLGLV DH     
Sbjct: 1   MVVALESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQDH----D 60

Query: 61  XXXXXQIAPSN-HHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVP 120
                +IAP N HHQEVDVNLIITDYSMPGMSGY+LLRKIKESKSLKDIPVVIMSSENVP
Sbjct: 61  QQTDSKIAPENHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVP 120

Query: 121 SRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSSRN 159
           SRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKS+ N
Sbjct: 121 SRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 155

[Close]
BLAST of Carg01371 vs. NCBI nr
Match: XP_004140290.1 (PREDICTED: two-component response regulator ARR9-like [Cucumis sativus] >KGN51089.1 hypothetical protein Csa_5G434550 [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64
Identity = 135/160 (84.38%), Postives = 141/160 (88.12%), Query Frame = 0 

Query: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXX 60
           M VAVEST FHVLAVDDSFIDRKLIERLL+TSSYHVT VDSG KALEFLGLV  H     
Sbjct: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHH----D 60

Query: 61  XXXXXQIAP--SNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENV 120
                +IAP  ++HHQEVDVNLIITDYSMPGMSGY+LLRKIKESKSLKDIPVVIMSSENV
Sbjct: 61  QQTDSKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENV 120

Query: 121 PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSSRN 159
           PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKS+ N
Sbjct: 121 PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 156

[Close]
BLAST of Carg01371 vs. TAIR10
Match: AT3G57040.1 (response regulator 9)

HSP 1 Score: 196.4 bits (498), Expect = 1.3e-50
Identity = 104/154 (67.53%), Postives = 122/154 (79.22%), Query Frame = 0 

Query: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXX 60
           MG+A ES +FHVLAVDDS  DRKLIERLL+ SS  VT VDSG+KALEFLGL         
Sbjct: 1   MGMAAES-QFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGL--RQSTDSN 60

Query: 61  XXXXXQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPS 120
                  AP N HQ V+VNLIITDY MPGM+GYDLL+K+KES + +DIPVVIMSSENVP+
Sbjct: 61  DPNAFSKAPVN-HQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPA 120

Query: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 155
           RI+RCLEEGAEEFFLKPV+L+D+ KL+PH++K K
Sbjct: 121 RISRCLEEGAEEFFLKPVRLADLNKLKPHMMKTK 150

[Close]
BLAST of Carg01371 vs. TAIR10
Match: AT2G41310.1 (response regulator 3)

HSP 1 Score: 193.0 bits (489), Expect = 1.4e-49
Identity = 97/147 (65.99%), Postives = 117/147 (79.59%), Query Frame = 0 

Query: 8   TRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXXXXXXXQI 67
           ++FHVLAVDDS  DRK+IERLL+ SS  VT VDSG+KALEFLGL  D           QI
Sbjct: 7   SKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQI 66

Query: 68  APSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLE 127
                HQEV++NLIITDY MPGM+GYDLL+K+KES + + IPVVIMSSENVP+RI+RCLE
Sbjct: 67  -----HQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLE 126

Query: 128 EGAEEFFLKPVQLSDVRKLRPHLIKEK 155
           EGAEEFFLKPV+L+D+ KL+PH++K K
Sbjct: 127 EGAEEFFLKPVKLADLTKLKPHMMKTK 148

[Close]
BLAST of Carg01371 vs. TAIR10
Match: AT3G48100.1 (response regulator 5)

HSP 1 Score: 162.9 bits (411), Expect = 1.6e-40
Identity = 85/150 (56.67%), Postives = 113/150 (75.33%), Query Frame = 0 

Query: 11  HVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXXXXXXXQIAPS 70
           HVLAVDDS +DRK IERLL  SS  VTVVDS  +AL++LGL G++              S
Sbjct: 26  HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENN------------SS 85

Query: 71  NHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGA 130
              +++ +NLI+TDYSMPGM+GY+LL+KIKES + ++IPVVIMSSEN+  RI+RCLEEGA
Sbjct: 86  VGFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGA 145

Query: 131 EEFFLKPVQLSDVRKLRPHLIK--EKSSRN 159
           E+F LKPV+L+DV++LR  L+K  E++ +N
Sbjct: 146 EDFLLKPVKLADVKRLRDSLMKAEERAFKN 163

[Close]
BLAST of Carg01371 vs. TAIR10
Match: AT1G74890.1 (response regulator 15)

HSP 1 Score: 161.0 bits (406), Expect = 6.0e-40
Identity = 80/146 (54.79%), Postives = 112/146 (76.71%), Query Frame = 0 

Query: 7   STRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXXXXXXXQ 66
           S   HVLAVDDSF+DRK+IERLL+ S+  VT V+SG +AL++LGL GD+           
Sbjct: 15  SPELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNG---------- 74

Query: 67  IAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCL 126
              S+  +++ VNLI+TDYSMPG++GY+LL+KIKES +L++IPVVIMSSEN+  RI +C+
Sbjct: 75  ---SSGLKDLKVNLIVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCM 134

Query: 127 EEGAEEFFLKPVQLSDVRKLRPHLIK 153
            EGAEEF LKPV+L+DV++L+  +++
Sbjct: 135 IEGAEEFLLKPVKLADVKRLKELIMR 147

[Close]
BLAST of Carg01371 vs. TAIR10
Match: AT1G59940.1 (response regulator 3)

HSP 1 Score: 160.2 bits (404), Expect = 1.0e-39
Identity = 84/149 (56.38%), Postives = 109/149 (73.15%), Query Frame = 0 

Query: 5   VESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXXXXXX 64
           ++S + HVLAVDDS +DR +IERLL  +S  VT VDSG +ALEFLGL  D          
Sbjct: 28  LDSDQVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDD---------- 87

Query: 65  XQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINR 124
                +     + V+LIITDY MPGM+GY+LL+KIKES S K++PVVIMSSENV +RI+R
Sbjct: 88  ---KAAVEFDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDR 147

Query: 125 CLEEGAEEFFLKPVQLSDVRKLRPHLIKE 154
           CLEEGAE+F LKPV+L+DV++LR +L ++
Sbjct: 148 CLEEGAEDFLLKPVKLADVKRLRSYLTRD 163

[Close]
BLAST of Carg01371 vs. Swiss-Prot
Match: sp|B8BLZ4|ORR10_ORYSI (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN=RR10 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.1e-50
Identity = 105/154 (68.18%), Postives = 124/154 (80.52%), Query Frame = 0 

Query: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXX 60
           M VA+E+  FHVLAVDDS  DRKLIERLL+TSS+ VT VDSG+KALEFLGL  DH     
Sbjct: 1   MAVAIEAP-FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL-HDH----- 60

Query: 61  XXXXXQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPS 120
                 I+  +  QEV VNLIITDY MPGM+GYDLL+KIKES  L+DIPVVIMSS+N+PS
Sbjct: 61  --EDSPISTQSDQQEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPS 120

Query: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 155
           RINRCLEEGA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 RINRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]
BLAST of Carg01371 vs. Swiss-Prot
Match: sp|Q2QXY3|ORR10_ORYSJ (Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica OX=39947 GN=RR10 PE=2 SV=2)

HSP 1 Score: 199.9 bits (507), Expect = 2.1e-50
Identity = 105/154 (68.18%), Postives = 124/154 (80.52%), Query Frame = 0 

Query: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXX 60
           M VA+E+  FHVLAVDDS  DRKLIERLL+TSS+ VT VDSG+KALEFLGL  DH     
Sbjct: 1   MAVAIEAP-FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL-HDH----- 60

Query: 61  XXXXXQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPS 120
                 I+  +  QEV VNLIITDY MPGM+GYDLL+KIKES  L+DIPVVIMSS+N+PS
Sbjct: 61  --EDSPISTQSDQQEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPS 120

Query: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 155
           RINRCLEEGA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 RINRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]
BLAST of Carg01371 vs. Swiss-Prot
Match: sp|Q4GZK2|ORR9_ORYSI (Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=RR9 PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.7e-50
Identity = 105/154 (68.18%), Postives = 124/154 (80.52%), Query Frame = 0 

Query: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXX 60
           M VA+E+  FHVLAVDDS  DRKLIERLL+TSS+ VT VDSG+KALEFLGL  DH     
Sbjct: 1   MAVAIEAP-FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL-HDH----- 60

Query: 61  XXXXXQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPS 120
                 I+  +  QEV VNLIITDY MPGM+GYDLL+KIKES  L+DIPVVIMSS+N+PS
Sbjct: 61  --EDSPISTQSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPS 120

Query: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 155
           RINRCLEEGA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 RINRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]
BLAST of Carg01371 vs. Swiss-Prot
Match: sp|Q2RAP3|ORR9_ORYSJ (Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica OX=39947 GN=RR9 PE=2 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 2.7e-50
Identity = 105/154 (68.18%), Postives = 124/154 (80.52%), Query Frame = 0 

Query: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXX 60
           M VA+E+  FHVLAVDDS  DRKLIERLL+TSS+ VT VDSG+KALEFLGL  DH     
Sbjct: 1   MAVAIEAP-FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL-HDH----- 60

Query: 61  XXXXXQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPS 120
                 I+  +  QEV VNLIITDY MPGM+GYDLL+KIKES  L+DIPVVIMSS+N+PS
Sbjct: 61  --EDSPISTQSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPS 120

Query: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 155
           RINRCLEEGA+EFFLKPV+LSD+ KL+PH++K +
Sbjct: 121 RINRCLEEGADEFFLKPVRLSDMSKLKPHILKSR 145

[Close]
BLAST of Carg01371 vs. Swiss-Prot
Match: sp|O80366|ARR9_ARATH (Two-component response regulator ARR9 OS=Arabidopsis thaliana OX=3702 GN=ARR9 PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.3e-49
Identity = 104/154 (67.53%), Postives = 122/154 (79.22%), Query Frame = 0 

Query: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXX 60
           MG+A ES +FHVLAVDDS  DRKLIERLL+ SS  VT VDSG+KALEFLGL         
Sbjct: 1   MGMAAES-QFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGL--RQSTDSN 60

Query: 61  XXXXXQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPS 120
                  AP N HQ V+VNLIITDY MPGM+GYDLL+K+KES + +DIPVVIMSSENVP+
Sbjct: 61  DPNAFSKAPVN-HQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPA 120

Query: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEK 155
           RI+RCLEEGAEEFFLKPV+L+D+ KL+PH++K K
Sbjct: 121 RISRCLEEGAEEFFLKPVRLADLNKLKPHMMKTK 150

[Close]
BLAST of Carg01371 vs. TrEMBL
Match: tr|A0A1S3CPY2|A0A1S3CPY2_CUCME (two-component response regulator ORR10-like OS=Cucumis melo OX=3656 GN=LOC103503483 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.3e-65
Identity = 136/159 (85.53%), Postives = 141/159 (88.68%), Query Frame = 0 

Query: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXX 60
           M VA+EST FHVLAVDDSFIDRKLIERLL+TSSYHVT VDSG KALEFLGLV DH     
Sbjct: 1   MVVALESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQDH----D 60

Query: 61  XXXXXQIAPSN-HHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVP 120
                +IAP N HHQEVDVNLIITDYSMPGMSGY+LLRKIKESKSLKDIPVVIMSSENVP
Sbjct: 61  QQTDSKIAPENHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVP 120

Query: 121 SRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSSRN 159
           SRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKS+ N
Sbjct: 121 SRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 155

[Close]
BLAST of Carg01371 vs. TrEMBL
Match: tr|A0A0A0KQE6|A0A0A0KQE6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G434550 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.5e-64
Identity = 135/160 (84.38%), Postives = 141/160 (88.12%), Query Frame = 0 

Query: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXX 60
           M VAVEST FHVLAVDDSFIDRKLIERLL+TSSYHVT VDSG KALEFLGLV  H     
Sbjct: 1   MVVAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHH----D 60

Query: 61  XXXXXQIAP--SNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENV 120
                +IAP  ++HHQEVDVNLIITDYSMPGMSGY+LLRKIKESKSLKDIPVVIMSSENV
Sbjct: 61  QQTDSKIAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENV 120

Query: 121 PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSSRN 159
           PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKS+ N
Sbjct: 121 PSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTNN 156

[Close]
BLAST of Carg01371 vs. TrEMBL
Match: tr|A0A2P6S9N1|A0A2P6S9N1_ROSCH (Putative response regulator and transcription factor RR-A-type family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0323961 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 6.6e-57
Identity = 117/155 (75.48%), Postives = 127/155 (81.94%), Query Frame = 0 

Query: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXX 60
           MGV     +FHVLAVDDS IDRKLIERLL+TSSY VT VDSG KALEFLGL  D      
Sbjct: 1   MGVGAAEAQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGIKALEFLGL-NDEEDQSD 60

Query: 61  XXXXXQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPS 120
                 ++P+NHHQ+VDVNLIITDY MPGM+GYDLLRKIKESKSLKDIPVVIMSSEN PS
Sbjct: 61  IAEAPSVSPNNHHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENEPS 120

Query: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKS 156
           RINRCLEEGAEEFFLKPV+LSDV KLRPH++K  S
Sbjct: 121 RINRCLEEGAEEFFLKPVKLSDVNKLRPHMMKGTS 154

[Close]
BLAST of Carg01371 vs. TrEMBL
Match: tr|A0A2N9HAQ8|A0A2N9HAQ8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS36840 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 8.6e-57
Identity = 115/158 (72.78%), Postives = 134/158 (84.81%), Query Frame = 0 

Query: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXX 60
           MG+A E+ ++HVLAVDDS +DRKLIERLL+TSSYHVT VDSG+KALEFLGL+ DH     
Sbjct: 1   MGMAAEA-QYHVLAVDDSLLDRKLIERLLKTSSYHVTAVDSGSKALEFLGLLEDH--EQN 60

Query: 61  XXXXXQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPS 120
                 ++ ++HHQ+ +VNLIITDY MPGM+GYDLLRKIKESKSLKDIPVVIMSSEN+PS
Sbjct: 61  DANAPSVSLNDHHQDAEVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENIPS 120

Query: 121 RINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSSRN 159
           RINRCLEEGAEEFFLKPVQLSDV KLRPH++K K   +
Sbjct: 121 RINRCLEEGAEEFFLKPVQLSDVSKLRPHMLKGKDKES 155

[Close]
BLAST of Carg01371 vs. TrEMBL
Match: tr|A0A2C9W4D5|A0A2C9W4D5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G159800 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.1e-56
Identity = 117/159 (73.58%), Postives = 132/159 (83.02%), Query Frame = 0 

Query: 1   MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHXXXXX 60
           MG++ E+  FHVLAVDDS IDRKLIERLL+TSSYHVT VDSG+KALEFLGL  D      
Sbjct: 53  MGMSAEAHHFHVLAVDDSLIDRKLIERLLKTSSYHVTAVDSGSKALEFLGLNEDE---QI 112

Query: 61  XXXXXQIAPS-NHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVP 120
                 ++P  +HHQ+++VNLIITDY MPGM+G+DLLRKIKESKS K+IPVVIMSSENVP
Sbjct: 113 DSIPTSVSPDHHHHQDIEVNLIITDYCMPGMTGFDLLRKIKESKSFKNIPVVIMSSENVP 172

Query: 121 SRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSSRN 159
           SRINRCLEEGAEEFFLKPVQLSDV KLRPHL+K KS  N
Sbjct: 173 SRINRCLEEGAEEFFLKPVQLSDVNKLRPHLMKGKSQEN 208

The following BLAST results are available for this feature:
BLAST of Carg01371 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023550008.19.9e-7391.77two-component response regulator ORR4-like [Cucurbita pepo subsp. pepo][more]
XP_022938947.11.1e-7196.25two-component response regulator ORR4-like [Cucurbita moschata][more]
XP_022993798.11.9e-7196.20two-component response regulator ORR4-like [Cucurbita maxima][more]
XP_008465907.12.0e-6585.53PREDICTED: two-component response regulator ORR10-like [Cucumis melo][more]
XP_004140290.12.2e-6484.38PREDICTED: two-component response regulator ARR9-like [Cucumis sativus] >KGN5108... [more]
BLAST of Carg01371 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G57040.11.3e-5067.53response regulator 9[more]
AT2G41310.11.4e-4965.99response regulator 3[more]
AT3G48100.11.6e-4056.67response regulator 5[more]
AT1G74890.16.0e-4054.79response regulator 15[more]
AT1G59940.11.0e-3956.38response regulator 3[more]
BLAST of Carg01371 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|B8BLZ4|ORR10_ORYSI2.1e-5068.18Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN... [more]
sp|Q2QXY3|ORR10_ORYSJ2.1e-5068.18Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
sp|Q4GZK2|ORR9_ORYSI2.7e-5068.18Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=... [more]
sp|Q2RAP3|ORR9_ORYSJ2.7e-5068.18Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
sp|O80366|ARR9_ARATH2.3e-4967.53Two-component response regulator ARR9 OS=Arabidopsis thaliana OX=3702 GN=ARR9 PE... [more]
BLAST of Carg01371 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CPY2|A0A1S3CPY2_CUCME1.3e-6585.53two-component response regulator ORR10-like OS=Cucumis melo OX=3656 GN=LOC103503... [more]
tr|A0A0A0KQE6|A0A0A0KQE6_CUCSA1.5e-6484.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G434550 PE=4 SV=1[more]
tr|A0A2P6S9N1|A0A2P6S9N1_ROSCH6.6e-5775.48Putative response regulator and transcription factor RR-A-type family OS=Rosa ch... [more]
tr|A0A2N9HAQ8|A0A2N9HAQ8_FAGSY8.6e-5772.78Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS36840 PE=4 SV=1[more]
tr|A0A2C9W4D5|A0A2C9W4D5_MANES1.1e-5673.58Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G159800 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000160phosphorelay signal transduction system
Vocabulary: INTERPRO
TermDefinition
IPR011006CheY-like_superfamily
IPR001789Sig_transdc_resp-reg_receiver
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000160 phosphorelay signal transduction system
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg01371-RACarg01371-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001789Signal transduction response regulator, receiver domainSMARTSM00448REC_2coord: 10..147
e-value: 5.4E-19
score: 79.1
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 12..145
e-value: 5.1E-20
score: 71.6
IPR001789Signal transduction response regulator, receiver domainPROSITEPS50110RESPONSE_REGULATORYcoord: 11..151
score: 34.023
IPR001789Signal transduction response regulator, receiver domainCDDcd00156RECcoord: 13..145
e-value: 5.64332E-24
score: 90.3277
NoneNo IPR availableGENE3DG3DSA:3.40.50.2300coord: 11..158
e-value: 3.6E-32
score: 113.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..73
NoneNo IPR availablePANTHERPTHR43874:SF5SUBFAMILY NOT NAMEDcoord: 4..156
NoneNo IPR availablePANTHERPTHR43874FAMILY NOT NAMEDcoord: 4..156
IPR011006CheY-like superfamilySUPERFAMILYSSF52172CheY-likecoord: 9..147