Carg20910 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20910
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Serine/arginine-rich splicing factor like
Location	Cucurbita_argyrosperma_scaffold_141 : 291798 .. 294717 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGCTCTTCAAAAAGATACAGGTTTTCTCTTCCTCTTCCTCTTCCTCTCTCCTAGGGTTTTTCTTCTGTTCGAGTCCAAGAATCTGCAAGGTTTGTTTCTGTAATCATTTGATCCATGCTATTCTAAGCATTTTTCATTCGCTACTTGATCGATTTACTTCTTGTTTCTGGTCAAACTCTGAAAGTGAGTTCTTCGTTAACGCATTCCTTTATCCTCTCTTATACCATTGATCTCTTCTAGTTTAACTGGAAAAAGAATAGATATCACTATGTTGGTGAAGTTGTTTACTAGTTTCTTTTTATGGTCTTCTCATTTTGTTAACCTTGGGACTTGTTGGCTTTGTTTTCTACAGCGCGTTTGATAGTATCAACGATGAAGCCGATATTTGTTGGGAATTTTGGGTATGACACCCGGCAATCTGAGCTGGAGCGGGCATTCGCCAAATATGGGAGGGTCGATAGGATCGACATGAAATCTGGTATATTGCAATTTCTTTGTTATACCATGCAGTGTCGTTTTTAACGAAGATGTTCTAATGTTGAATATTTCTATTTCTAAGGTGGTATGAGGGAACTGTGGTGCTTACTTAAATTTTTTGTTTTTGTTTATTGTGAAACTGTAAATTTCCTTACCTAGTTTCGACATGCGAAGGTAATAGATGTCTGGAAAAGACTGTGTTCAACTTGATTTAGGATATGCGTATTGGATGTTGCATTTGGATTACGGGGTATATTTTAATTAAATGCTGCAATATTCCCAGTGAACCACCTTCCTTTTGTAGTGTGTCGATCTTGGTATTCTCACTAGGACCTGCATATATGTATGCATTCATGGATGACTTTATTGTTTTGGGATTTACAAAGTGTTGTCAATTGTTATTTCCTTGTTTAAACTTTCTAGTTGCTGATCTTTTTCTTGTTACTTATGGGCTTTTAGTTTCGCTTTCATTGTTTGTAATCATCTTATTTACTCTATATTTATTTTTAAATTTTATATTTGTCTTCTGGAATTTTCTTGTCTCTTACCCACCTTCCCTGACATCCTTAATCCTACGTAGTTATCGTTCAGTTAATGATTTTAGACATCTTGGGTTTTCTGGTGTATGAAATTATGGTATTTTAGTGCGAGGATGTTCCACTGGTGCTAATACTTGGTATTTCAGTGCGAGGGATGCTCCACTGACCCTAATACTAGGTACAAAAGTTGTGTCAAGTTTTTATCAATAAGACAAGAAATTGATGTTTTTTTTTATAAAAATTCTAAAACCCTGTTCAGTGACATGGATGCATAGCTATTATGCTATGATAATATCCGCTGATCCATTTTTTCTGATGAAAACTTGATGGGAGGCAAAAATTTACTATTTTTATGGGGAAAGCCTCCATATAAGATGTTTCTTTTGACGCAGGAATTTCTACTAAGGAAAATGAACCAAGCTCCTATCTGGGCTCATCACCATCTGTGCATAAAAATTAATTTGGAAGGAAACTTCCTGCTTGCCTGCTTAGCTTCATCTAAAGATATCATCATCCTGATTTTTCTTCAATCAATCATTCGTCATTCATCTACCTCTTCACTTAAGTTGCAATACACCAGAATCGTCTTAATGGATTGATCTTTATCTCATGCCACATCAATTAAGTCGCAATTCATCAGAATCGTCTTAATGGATGTTCTATATCTCATGCCTTGCCTACCTATCACCTCTGATCATAGGACATCACTGAATTCTGGTCATGCCTTCCATTTGATAATAGTGGCTGAATGAATCTGTCTTGCCATGCCTTCCATTTCTGAACTCGTGCTGTGTGAAAGGCGAAGCATGGTTGAAATTTTGGATTAAAACCTTTAGTATGCAACCATCTTATTTCATCATGCAACGTCTCTACAGCTAAATGTGCATCAGTCTTCCCATATTTTCAGGTGTTGTACTTTTTATAGTTTATCCCAGGGAAAGAAATCATGAGCCTGAGTGACAATACCTGCTAAATAGATAATGCTTCAATATCTTACCGTATTTTATATCTCTAATTGTTCTATTTTGCAGGTTTTGCTTTTGTTTACTTTGAAGACGAGAGGGATGCTGATGATGCTATTCGTGGCCTTGATAACATGCCATTTGGTCATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGGTAGGCCTTTCTCCCACCGTTGTTGCCCCCTTTTTTGGGTCTATGCATTTTAGAAGCTGGTTTATTTCATGCTTTGAAAATCTCTCTTTCTTTTCATATATGGCAACCAATAGTTGATTTTAACTTTAGCTTTTTGTTTGGTTTGGTTAGGGTGAACGGGGTCGTCATCGTGATGGATCCAAGTCGATGGCAAATCAGAGGCCAACCAAAACCTTGTTTGTGATCAATTTCGACCCTATTCATACTAGAGTTCGTGATATTGAAAGACATTTTGAACCTTATGGGAAGGTCCTCAATGTTCGCATAAGAAGGAACTTTTCATTTGTACAATTTGAGACGCAGGAGGAGGCAACCAAAGCCCTTGAGTGTACCCACATGAGGTTAGCAGAGTTTTGGGTTTCCCACATGGTTGTTTCTCCTTTCAATTGGCATATTTAATTTCTTTTACTCTCTAAAATACTGTATTGGCTTTATAATTTTGCAGCAAAATATTAGACAGGGTTGTGTCAGTTGAGTATGCTTTGAGGGATGATGGTGAGAGGGGTGACCCTTATGATGATAGCCCCCGGAGAACAGCATATGGGCGGCCTGGGGATAGTCCTTACCGGAGGTCACCTAGTCCGTTGCGCCGTCGACCAAGTCCTGACTATGGGCCACGCAGCCCTGCTTATGACAGGTATAATGGCCCTCGTGAACGACGCAAGAGTCCTGATTATGCTCGGAATCGAAGCCCTGAATATGGCAGATACCGCAGGTAA

mRNA sequence

AGGGCTCTTCAAAAAGATACAGGTTTTCTCTTCCTCTTCCTCTTCCTCTCTCCTAGGGTTTTTCTTCTGTTCGAGTCCAAGAATCTGCAAGCGCGTTTGATAGTATCAACGATGAAGCCGATATTTGTTGGGAATTTTGGGTATGACACCCGGCAATCTGAGCTGGAGCGGGCATTCGCCAAATATGGGAGGGTCGATAGGATCGACATGAAATCTGGAATTTCTACTAAGGAAAATGAACCAAGCTCCTATCTGGGCTCATCACCATCTGTGCATAAAAATTAATTTGGAAGGAAACTTCCTGCTTGCCTGCTTAGCTTCATCTAAAGATATCATCATCCTGATTTTTCTTCAATCAATCATTCGTCATTCATCTACCTCTTCACTTAAGTTGCAATACACCAGAATCGTCTTAATGGATTGATCTTTATCTCATGCCACATCAATTAAGTCGCAATTCATCAGAATCGTCTTAATGGATGTTCTATATCTCATGCCTTGCCTACCTATCACCTCTGATCATAGGACATCACTGAATTCTGGTCATGCCTTCCATTTGATAATAGTGGCTGAATGAATCTGTCTTGCCATGCCTTCCATTTCTGAACTCGTGCTGTGTGAAAGGCGAAGCATGGTTGAAATTTTGGATTAAAACCTTTAGTATGCAACCATCTTATTTCATCATGCAACGTCTCTACAGCTAAATGTGCATCAGTCTTCCCATATTTTCAGGTTTTGCTTTTGTTTACTTTGAAGACGAGAGGGATGCTGATGATGCTATTCGTGGCCTTGATAACATGCCATTTGGTCATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGGGTGAACGGGGTCGTCATCGTGATGGATCCAAGTCGATGGCAAATCAGAGGCCAACCAAAACCTTGTTTGTGATCAATTTCGACCCTATTCATACTAGAGTTCGTGATATTGAAAGACATTTTGAACCTTATGGGAAGGTCCTCAATGTTCGCATAAGAAGGAACTTTTCATTTGTACAATTTGAGACGCAGGAGGAGGCAACCAAAGCCCTTGAGTGTACCCACATGAGCAAAATATTAGACAGGGTTGTGTCAGTTGAGTATGCTTTGAGGGATGATGGTGAGAGGGGTGACCCTTATGATGATAGCCCCCGGAGAACAGCATATGGGCGGCCTGGGGATAGTCCTTACCGGAGGTCACCTAGTCCGTTGCGCCGTCGACCAAGTCCTGACTATGGGCCACGCAGCCCTGCTTATGACAGGTATAATGGCCCTCGTGAACGACGCAAGAGTCCTGATTATGCTCGGAATCGAAGCCCTGAATATGGCAGATACCGCAGGTAA

Coding sequence (CDS)

ATGTGCATCAGTCTTCCCATATTTTCAGGTTTTGCTTTTGTTTACTTTGAAGACGAGAGGGATGCTGATGATGCTATTCGTGGCCTTGATAACATGCCATTTGGTCATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGGGTGAACGGGGTCGTCATCGTGATGGATCCAAGTCGATGGCAAATCAGAGGCCAACCAAAACCTTGTTTGTGATCAATTTCGACCCTATTCATACTAGAGTTCGTGATATTGAAAGACATTTTGAACCTTATGGGAAGGTCCTCAATGTTCGCATAAGAAGGAACTTTTCATTTGTACAATTTGAGACGCAGGAGGAGGCAACCAAAGCCCTTGAGTGTACCCACATGAGCAAAATATTAGACAGGGTTGTGTCAGTTGAGTATGCTTTGAGGGATGATGGTGAGAGGGGTGACCCTTATGATGATAGCCCCCGGAGAACAGCATATGGGCGGCCTGGGGATAGTCCTTACCGGAGGTCACCTAGTCCGTTGCGCCGTCGACCAAGTCCTGACTATGGGCCACGCAGCCCTGCTTATGACAGGTATAATGGCCCTCGTGAACGACGCAAGAGTCCTGATTATGCTCGGAATCGAAGCCCTGAATATGGCAGATACCGCAGGTAA

Protein sequence

MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRR

Homology

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BLAST of Carg20910 vs. NCBI nr
Match: XP_022944508.1 (serine/arginine-rich splicing factor RS31-like isoform X2 [Cucurbita moschata] >XP_022944517.1 serine/arginine-rich splicing factor RS31-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 344.4 bits (882), Expect = 2.9e-91
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSM 60
           MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSM
Sbjct: 1   MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSM 60

Query: 61  ANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALEC 120
           ANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALEC
Sbjct: 61  ANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALEC 120

Query: 121 THMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRR 167
           THMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRR
Sbjct: 121 THMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRR 166

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BLAST of Carg20910 vs. NCBI nr
Match: XP_022974853.1 (serine/arginine-rich splicing factor RS31-like isoform X2 [Cucurbita maxima] >XP_022974854.1 serine/arginine-rich splicing factor RS31-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 339.0 bits (868), Expect = 1.2e-89
Identity = 164/166 (98.80%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 1   MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSM 60
           MCIS PIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSM
Sbjct: 1   MCISPPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSM 60

Query: 61  ANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALEC 120
           ANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALEC
Sbjct: 61  ANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALEC 120

Query: 121 THMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRR 167
           THMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYG PGDSPYRR
Sbjct: 121 THMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGPPGDSPYRR 166

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BLAST of Carg20910 vs. NCBI nr
Match: XP_023539918.1 (serine/arginine-rich splicing factor RS31-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023539919.1 serine/arginine-rich splicing factor RS31-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 336.7 bits (862), Expect = 6.0e-89
Identity = 163/166 (98.19%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSM 60
           MCIS  IFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSM
Sbjct: 1   MCISPTIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSM 60

Query: 61  ANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALEC 120
           ANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALEC
Sbjct: 61  ANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALEC 120

Query: 121 THMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRR 167
           THMSKILDRVVSVEYALRDDGERGDPYDDSPRR AYGRPGDSPYRR
Sbjct: 121 THMSKILDRVVSVEYALRDDGERGDPYDDSPRRAAYGRPGDSPYRR 166

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BLAST of Carg20910 vs. NCBI nr
Match: XP_022944500.1 (serine/arginine-rich splicing factor RS31-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 327.4 bits (838), Expect = 3.6e-86
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 9   SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 68
           SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKT
Sbjct: 35  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 94

Query: 69  LFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILD 128
           LFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILD
Sbjct: 95  LFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILD 154

Query: 129 RVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRR 167
           RVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRR
Sbjct: 155 RVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRR 192

[Close]

BLAST of Carg20910 vs. NCBI nr
Match: XP_023539917.1 (serine/arginine-rich splicing factor RS31-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325.5 bits (833), Expect = 1.4e-85
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 9   SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 68
           SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKT
Sbjct: 35  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 94

Query: 69  LFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILD 128
           LFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILD
Sbjct: 95  LFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILD 154

Query: 129 RVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRR 167
           RVVSVEYALRDDGERGDPYDDSPRR AYGRPGDSPYRR
Sbjct: 155 RVVSVEYALRDDGERGDPYDDSPRRAAYGRPGDSPYRR 192

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BLAST of Carg20910 vs. TAIR10
Match: AT3G61860.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 222.2 bits (565), Expect = 3.0e-58
Identity = 111/147 (75.51%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 9   SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 68
           SG+AFVYFEDERDA+DAIR LDN PFG+++RRLSVEWA+GERGR R  +K+ +N +PTKT
Sbjct: 35  SGYAFVYFEDERDAEDAIRKLDNFPFGYEKRRLSVEWAKGERGRPRGDAKAPSNLKPTKT 94

Query: 69  LFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILD 128
           LFVINFDPI T+  DIE+HFEPYGKV NVRIRRNFSFVQFETQE+ATKALE T  SKILD
Sbjct: 95  LFVINFDPIRTKEHDIEKHFEPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILD 154

Query: 129 RVVSVEYALRDDGERGDPYDD-SPRRT 155
           RVVSVEYAL+DD ER D     SPRR+
Sbjct: 155 RVVSVEYALKDDDERDDRNGGRSPRRS 181

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BLAST of Carg20910 vs. TAIR10
Match: AT2G46610.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 211.8 bits (538), Expect = 4.0e-55
Identity = 106/140 (75.71%), Postives = 123/140 (87.86%), Query Frame = 0


Query: 9   SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWAR---GERGRHRDGSKSMANQRP 68
           SG+AFVYFEDERDA+DAIR  DN  FG+ RR+LSVEWA+   GERG+ RDG K+++NQRP
Sbjct: 35  SGYAFVYFEDERDAEDAIRRTDNTTFGYGRRKLSVEWAKDFQGERGKPRDG-KAVSNQRP 94

Query: 69  TKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSK 128
           TKTLFVINFDPI TR RD+ERHFEPYGKVLNVR+RRNF+FVQF TQE+ATKAL+ TH SK
Sbjct: 95  TKTLFVINFDPIRTRERDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSK 154

Query: 129 ILDRVVSVEYALRDDGERGD 146
           +LD+VVSVEYALR+ GER D
Sbjct: 155 LLDKVVSVEYALREAGERED 173

[Close]

BLAST of Carg20910 vs. TAIR10
Match: AT5G52040.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 183.3 bits (464), Expect = 1.5e-46
Identity = 87/148 (58.78%), Postives = 113/148 (76.35%), Query Frame = 0


Query: 9   SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGER---GRHRDGSKSMANQRP 68
           +GFAFVY EDERDA+DAIR LD   +G   RRL VEW + +R   GR     +S +  RP
Sbjct: 35  AGFAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRP 94

Query: 69  TKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSK 128
           +KTLFVINFD  +TR RD+ERHFEPYGK++NVRIRRNF+F+Q+E QE+AT+AL+ T+ SK
Sbjct: 95  SKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSK 154

Query: 129 ILDRVVSVEYALRDDGERGDPYDDSPRR 154
           ++D+V+SVEYA++DD  RG+ Y    RR
Sbjct: 155 LMDKVISVEYAVKDDDSRGNGYSPERRR 182

[Close]

BLAST of Carg20910 vs. TAIR10
Match: AT4G25500.1 (arginine/serine-rich splicing factor 35)

HSP 1 Score: 174.5 bits (441), Expect = 7.1e-44
Identity = 84/149 (56.38%), Postives = 110/149 (73.83%), Query Frame = 0


Query: 9   SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHR----DGSKSMANQR 68
           +GFAFVY EDERDA+DAIR LD   FG   RRL VEW + ERG  +             R
Sbjct: 35  AGFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKXXXXXXXXXXXXXR 94

Query: 69  PTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMS 128
           P+KTLFVINFD  +TR RD+E+HFEPYGK++NVRIRRNF+F+Q+E QE+AT+AL+ ++ S
Sbjct: 95  PSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNS 154

Query: 129 KILDRVVSVEYALRDDGERGDPYDDSPRR 154
           K++D+V+SVEYA++DD  RG+ +    RR
Sbjct: 155 KLMDKVISVEYAVKDDDARGNGHSPERRR 183

[Close]

BLAST of Carg20910 vs. TAIR10
Match: AT1G48920.1 (nucleolin like 1)

HSP 1 Score: 45.1 bits (105), Expect = 6.5e-05
Identity = 40/124 (32.26%), Postives = 58/124 (46.77%), Query Frame = 0


Query: 55  DGSKSMANQRPT---------KTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR----- 114
           D  KS A Q  T         KTLF  N    +    D+E  F+  G+V++VR       
Sbjct: 276 DAEKSSAKQPKTPSTPAAGGSKTLFAANLS-FNIERADVENFFKEAGEVVDVRFSTNRDD 335

Query: 115 ---RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYG 162
              R F  V+F + EEA KALE  H   +L R + ++ A ++ GERG+    +P+   + 
Sbjct: 336 GSFRGFGHVEFASSEEAQKALE-FHGRPLLGREIRLDIA-QERGERGERPAFTPQSGNFR 395

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BLAST of Carg20910 vs. Swiss-Prot
Match: sp|P92964|SRS31_ARATH (Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS31 PE=1 SV=2)

HSP 1 Score: 222.2 bits (565), Expect = 5.4e-57
Identity = 111/147 (75.51%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 9   SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 68
           SG+AFVYFEDERDA+DAIR LDN PFG+++RRLSVEWA+GERGR R  +K+ +N +PTKT
Sbjct: 35  SGYAFVYFEDERDAEDAIRKLDNFPFGYEKRRLSVEWAKGERGRPRGDAKAPSNLKPTKT 94

Query: 69  LFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILD 128
           LFVINFDPI T+  DIE+HFEPYGKV NVRIRRNFSFVQFETQE+ATKALE T  SKILD
Sbjct: 95  LFVINFDPIRTKEHDIEKHFEPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILD 154

Query: 129 RVVSVEYALRDDGERGDPYDD-SPRRT 155
           RVVSVEYAL+DD ER D     SPRR+
Sbjct: 155 RVVSVEYALKDDDERDDRNGGRSPRRS 181

[Close]

BLAST of Carg20910 vs. Swiss-Prot
Match: sp|Q9ZPX8|RS31A_ARATH (Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS31A PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 7.2e-54
Identity = 106/140 (75.71%), Postives = 123/140 (87.86%), Query Frame = 0


Query: 9   SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWAR---GERGRHRDGSKSMANQRP 68
           SG+AFVYFEDERDA+DAIR  DN  FG+ RR+LSVEWA+   GERG+ RDG K+++NQRP
Sbjct: 35  SGYAFVYFEDERDAEDAIRRTDNTTFGYGRRKLSVEWAKDFQGERGKPRDG-KAVSNQRP 94

Query: 69  TKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSK 128
           TKTLFVINFDPI TR RD+ERHFEPYGKVLNVR+RRNF+FVQF TQE+ATKAL+ TH SK
Sbjct: 95  TKTLFVINFDPIRTRERDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSK 154

Query: 129 ILDRVVSVEYALRDDGERGD 146
           +LD+VVSVEYALR+ GER D
Sbjct: 155 LLDKVVSVEYALREAGERED 173

[Close]

BLAST of Carg20910 vs. Swiss-Prot
Match: sp|P92966|SRS41_ARATH (Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS41 PE=1 SV=2)

HSP 1 Score: 183.3 bits (464), Expect = 2.8e-45
Identity = 87/148 (58.78%), Postives = 113/148 (76.35%), Query Frame = 0


Query: 9   SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGER---GRHRDGSKSMANQRP 68
           +GFAFVY EDERDA+DAIR LD   +G   RRL VEW + +R   GR     +S +  RP
Sbjct: 35  AGFAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRP 94

Query: 69  TKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSK 128
           +KTLFVINFD  +TR RD+ERHFEPYGK++NVRIRRNF+F+Q+E QE+AT+AL+ T+ SK
Sbjct: 95  SKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSK 154

Query: 129 ILDRVVSVEYALRDDGERGDPYDDSPRR 154
           ++D+V+SVEYA++DD  RG+ Y    RR
Sbjct: 155 LMDKVISVEYAVKDDDSRGNGYSPERRR 182

[Close]

BLAST of Carg20910 vs. Swiss-Prot
Match: sp|P92965|RS40_ARATH (Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS40 PE=1 SV=2)

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-42
Identity = 84/149 (56.38%), Postives = 110/149 (73.83%), Query Frame = 0


Query: 9   SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHR----DGSKSMANQR 68
           +GFAFVY EDERDA+DAIR LD   FG   RRL VEW + ERG  +             R
Sbjct: 35  AGFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKXXXXXXXXXXXXXR 94

Query: 69  PTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMS 128
           P+KTLFVINFD  +TR RD+E+HFEPYGK++NVRIRRNF+F+Q+E QE+AT+AL+ ++ S
Sbjct: 95  PSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNS 154

Query: 129 KILDRVVSVEYALRDDGERGDPYDDSPRR 154
           K++D+V+SVEYA++DD  RG+ +    RR
Sbjct: 155 KLMDKVISVEYAVKDDDARGNGHSPERRR 183

[Close]

BLAST of Carg20910 vs. Swiss-Prot
Match: sp|Q5PPI1|SRSF9_RAT (Serine/arginine-rich splicing factor 9 OS=Rattus norvegicus OX=10116 GN=Srsf9 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.6e-06
Identity = 46/156 (29.49%), Postives = 71/156 (45.51%), Query Frame = 0


Query: 11  FAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLF 70
           FAFV FED RDA+DAI G +   +G  R R+    A G RG     S++    R +    
Sbjct: 54  FAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRAYGGRGGWPRASRNGPPTRRSDFRV 113

Query: 71  VINFDPIHTRVRDIERHFEPYGKVLNVRIRRN-FSFVQFETQEEATKALECTHMSKILDR 130
           +++  P     +D++ H    G V    ++++    V++  +E+   AL     +K    
Sbjct: 114 LVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSH 173

Query: 131 VVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYR 166
                Y +R   ERG  Y  S  R+   R  DSPY+
Sbjct: 174 EGETSY-IRVYPERGTSYGCSRSRSG-SRGRDSPYQ 207

[Close]

BLAST of Carg20910 vs. TrEMBL
Match: tr|A0A1S4DTR0|A0A1S4DTR0_CUCME (serine/arginine-rich splicing factor RS31-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483164 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 8.0e-82
Identity = 151/164 (92.07%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSM 60
           MCIS PIF+GFAFVYFEDERDA+DAIRGLDN+PFG+DRRRLSVEWARGERGRHRDGSKSM
Sbjct: 8   MCISPPIFAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSM 67

Query: 61  ANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALEC 120
           ANQRPTKTLFVINFDPI TRVRDIERHFEPYGKVLNVRIRRNF+FVQFETQE+ATKALEC
Sbjct: 68  ANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALEC 127

Query: 121 THMSKILDRVVSVEYALRDDGERGDPYDDSPRRT-AYGRPGDSP 164
           THMSKILDRVVSVEYALRDDGERGDP+D+SPRR   YGRPGDSP
Sbjct: 128 THMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSP 171

[Close]

BLAST of Carg20910 vs. TrEMBL
Match: tr|A0A1S3AUZ7|A0A1S3AUZ7_CUCME (serine/arginine-rich splicing factor RS31-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483164 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 7.0e-78
Identity = 145/156 (92.95%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 9   SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 68
           SGFAFVYFEDERDA+DAIRGLDN+PFG+DRRRLSVEWARGERGRHRDGSKSMANQRPTKT
Sbjct: 35  SGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 94

Query: 69  LFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILD 128
           LFVINFDPI TRVRDIERHFEPYGKVLNVRIRRNF+FVQFETQE+ATKALECTHMSKILD
Sbjct: 95  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 154

Query: 129 RVVSVEYALRDDGERGDPYDDSPRRT-AYGRPGDSP 164
           RVVSVEYALRDDGERGDP+D+SPRR   YGRPGDSP
Sbjct: 155 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSP 190

[Close]

BLAST of Carg20910 vs. TrEMBL
Match: tr|A0A0A0L8H4|A0A0A0L8H4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119350 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 7.0e-78
Identity = 145/156 (92.95%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 9   SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 68
           SGFAFVYFEDERDA+DAIRGLDN+PFG+DRRRLSVEWARGERGRHRDGSKSMANQRPTKT
Sbjct: 35  SGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 94

Query: 69  LFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILD 128
           LFVINFDPI TRVRDIERHFEPYGKVLNVRIRRNF+FVQFETQE+ATKALECTHMSKILD
Sbjct: 95  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 154

Query: 129 RVVSVEYALRDDGERGDPYDDSPRRT-AYGRPGDSP 164
           RVVSVEYALRDDGERGDP+D+SPRR   YGRPGDSP
Sbjct: 155 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSP 190

[Close]

BLAST of Carg20910 vs. TrEMBL
Match: tr|A0A068UJD0|A0A068UJD0_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00027680001 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 3.0e-73
Identity = 141/158 (89.24%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 9   SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 68
           SGFAFVYFEDERDA+DAIRGLDN PFGHDRRRLSVEWA+GERGRHRD S+SM NQRPTKT
Sbjct: 35  SGFAFVYFEDERDAEDAIRGLDNAPFGHDRRRLSVEWAKGERGRHRDSSRSMVNQRPTKT 94

Query: 69  LFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILD 128
           LFVINFDPI TR+RDIERHFEPYGKVLNVRIRRNF+FVQFETQE+ATKALECTHMSKILD
Sbjct: 95  LFVINFDPIRTRIRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 154

Query: 129 RVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRR 167
           RVVSVEYALRDDGERGD Y DSPRR  YG  G SPYRR
Sbjct: 155 RVVSVEYALRDDGERGDRY-DSPRRD-YGGRGGSPYRR 190

[Close]

BLAST of Carg20910 vs. TrEMBL
Match: tr|A0A251QJD3|A0A251QJD3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G193200 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.4e-70
Identity = 132/154 (85.71%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 9   SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 68
           SGFAFVYFEDERDA+DAI+ LDN PFG+DRRRLSVEWA+GERGRH DGSKS+ANQRPTKT
Sbjct: 35  SGFAFVYFEDERDAEDAIQNLDNKPFGYDRRRLSVEWAKGERGRHHDGSKSVANQRPTKT 94

Query: 69  LFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILD 128
           LFVINFDP+ T+VRDIERHFEPYGKVL+VRIRRNF+FVQF+TQEEATKALE TH SKILD
Sbjct: 95  LFVINFDPLRTKVRDIERHFEPYGKVLHVRIRRNFAFVQFDTQEEATKALEATHASKILD 154

Query: 129 RVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDS 163
           RVVSVEYALRDDGERGD Y DSP+R +YGR GDS
Sbjct: 155 RVVSVEYALRDDGERGDRYHDSPKRGSYGRRGDS 188

The following BLAST results are available for this feature:

BLAST of Carg20910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944508.1	2.9e-91	100.00	serine/arginine-rich splicing factor RS31-like isoform X2 [Cucurbita moschata] >...	[more]
XP_022974853.1	1.2e-89	98.80	serine/arginine-rich splicing factor RS31-like isoform X2 [Cucurbita maxima] >XP...	[more]
XP_023539918.1	6.0e-89	98.19	serine/arginine-rich splicing factor RS31-like isoform X2 [Cucurbita pepo subsp....	[more]
XP_022944500.1	3.6e-86	100.00	serine/arginine-rich splicing factor RS31-like isoform X1 [Cucurbita moschata]	[more]
XP_023539917.1	1.4e-85	99.37	serine/arginine-rich splicing factor RS31-like isoform X1 [Cucurbita pepo subsp....	[more]

BLAST of Carg20910 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61860.1	3.0e-58	75.51	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G46610.1	4.0e-55	75.71	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G52040.2	1.5e-46	58.78	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G25500.1	7.1e-44	56.38	arginine/serine-rich splicing factor 35	[more]
AT1G48920.1	6.5e-05	32.26	nucleolin like 1	[more]

BLAST of Carg20910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P92964\|SRS31_ARATH	5.4e-57	75.51	Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS3...	[more]
sp\|Q9ZPX8\|RS31A_ARATH	7.2e-54	75.71	Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
sp\|P92966\|SRS41_ARATH	2.8e-45	58.78	Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
sp\|P92965\|RS40_ARATH	1.3e-42	56.38	Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
sp\|Q5PPI1\|SRSF9_RAT	9.6e-06	29.49	Serine/arginine-rich splicing factor 9 OS=Rattus norvegicus OX=10116 GN=Srsf9 PE...	[more]

BLAST of Carg20910 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DTR0\|A0A1S4DTR0_CUCME	8.0e-82	92.07	serine/arginine-rich splicing factor RS31-like isoform X2 OS=Cucumis melo OX=365...	[more]
tr\|A0A1S3AUZ7\|A0A1S3AUZ7_CUCME	7.0e-78	92.95	serine/arginine-rich splicing factor RS31-like isoform X1 OS=Cucumis melo OX=365...	[more]
tr\|A0A0A0L8H4\|A0A0A0L8H4_CUCSA	7.0e-78	92.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119350 PE=4 SV=1	[more]
tr\|A0A068UJD0\|A0A068UJD0_COFCA	3.0e-73	89.24	Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00027680001 PE=4 ...	[more]
tr\|A0A251QJD3\|A0A251QJD3_PRUPE	2.4e-70	85.71	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G193200 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0000398	mRNA splicing, via spliceosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005681	spliceosomal complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR029536	RS31
IPR029537	RSP31/31A/40/41
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0008150	biological_process
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20910-RA	Carg20910-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 68..134 e-value: 3.0E-15 score: 66.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 9..36 e-value: 2.0E-5 score: 24.2 coord: 69..131 e-value: 9.2E-11 score: 41.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 67..138 score: 14.76
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 10..48 score: 9.217
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 6..60 e-value: 7.3E-9 score: 37.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 61..145 e-value: 4.1E-18 score: 67.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..214
None	No IPR available	CDD	cd12466	RRM2_AtRSp31_like	coord: 68..137 e-value: 2.26034E-40 score: 133.443
IPR029537	Arginine/serine-rich-splicing factor RSP31/31A/40/41	PANTHER	PTHR44257	FAMILY NOT NAMED	coord: 7..213
IPR029536	Serine/arginine-rich splicing factor RS31	PANTHER	PTHR44257:SF3	SERINE/ARGININE-RICH SPLICING FACTOR RS31-RELATED	coord: 7..213
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 9..141

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20910	Cla021132	Watermelon (97103) v1	carwmB0992
Carg20910	Csa3G119350	Cucumber (Chinese Long) v2	carcuB1007
Carg20910	MELO3C006002	Melon (DHL92) v3.5.1	carmeB0968
Carg20910	Cucsa.259460	Cucumber (Gy14) v1	carcgyB1110
Carg20910	CmaCh06G009810	Cucurbita maxima (Rimu)	carcmaB1376
Carg20910	CmoCh06G010240	Cucurbita moschata (Rifu)	carcmoB1332
Carg20910	CmoCh14G021870	Cucurbita moschata (Rifu)	carcmoB1330
Carg20910	Lsi05G021500	Bottle gourd (USVL1VR-Ls)	carlsiB907
Carg20910	Cp4.1LG08g00850	Cucurbita pepo (Zucchini)	carcpeB1380
Carg20910	Cp4.1LG03g15890	Cucurbita pepo (Zucchini)	carcpeB1379
Carg20910	MELO3C006002.2	Melon (DHL92) v3.6.1	carmedB0978
Carg20910	CsaV3_3G007840	Cucumber (Chinese Long) v3	carcucB1037
Carg20910	Cla97C05G080700	Watermelon (97103) v2	carwmbB1047
Carg20910	Bhi01G000378	Wax gourd	carwgoB1162

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20910	Carg25710	Silver-seed gourd	carcarB146

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20910	Cucumber (Gy14) v2	carcgybB0980
Carg20910	Cucurbita maxima (Rimu)	carcmaB1371
Carg20910	Cucurbita maxima (Rimu)	carcmaB1373
Carg20910	Wild cucumber (PI 183967)	carcpiB1031
Carg20910	Watermelon (Charleston Gray)	carwcgB0968
Carg20910	Watermelon (97103) v2	carwmbB1044