Carg20259 (gene) Silver-seed gourd

NameCarg20259
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionzinc finger protein CONSTANS-like
LocationCucurbita_argyrosperma_scaffold_131 : 182871 .. 184532 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAATCTCCCACTTTCTCTCCGCCGCCTCGCATTCCTCCACCGACACCGCCGGTGTTGATTTTGACTGGTTACCCGGTTCCTCCATCAAGCAATGGAACTCTGAACTTCCCGACAGCTGGGGCGACGGTTCACTGACTTCACCGCCGCAACCCCAAACAATTCATCCACCAACTAACAATATTCTATTTCACCAATCTTTTAGCCTCCTCAACCCTTCTCTCAAAACCAATGGCCTTCTTCAACAAACCGGTTCGTCGCCGTCGCCGTCGCCGCCACCGCCGCTCTCCTCCGATAACGTCCTACACAAGCTATCCCTTCCCGCCGGTGATTTTCAGGTGAGAGGTTTATCATCACTTCAAGATGACACAATTAAACATATCATTCCAGAACATGAAACAGTTGATTATTTCCAATAATACAATAATTTATTCAAGACTAAAATTTAAAATCCAAAAAATGAGCCGTCACATACCCTTTTTCATTTAATAAATGAGTCAAAAAGTCACATTATTATTTCAGTTTTTTTTCAAATAATTTCTCCTATTAATGGAAATATTCAACTATGATGCTCAACCTCCATGCAAAGGATCATTGAAAAAGCTTGGCTTTTCAAGAACCCAAAGAGTTCTTTTTTCTTTTTGGGTCTCGAGTATAATATTTAAATTAATATATATATATATAAATGATTAAATGGGGTATGAATAATAAATTTAAAAATGGGTATGGCAGAGGAATAATCAGAGAGCAGAGAGTCCAGTTTCATGTGAAAGTAGCATCGCCATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCAGAAGAGAAGAAGGAGAGAATTCAAAGGTATAGGAGCAAAAGAAACCAGAGGAACTTCAACAAGAAGATTAAGGTTTTTTCTTTTTATTTTTTTATTTTTTTATTTTTTTTTTTGTTCTCTCTTATATTCTTCTTTATCTTACCCTACTTGAAATTATGAAATAATTCTAAAGAATAATTCATTTCTTATTGTACCTACATATAATTTGATAGATTCTATATGCCAACAACCATAAAGTTAGTAATTGGAAAGATAATTTCTAACTTTATAGTATAAATGTAATAATTCAAATAATTTAACTGCATATAGTTTGATTCTTCACTAAAATAAGTAATTTATGCAAAGTTATTGAGTAATGTTCGTATAGTTTTCAATTTCATCCTTCATCTTTTTGCTTTTGTCATTCAAACTACACTTTTTTATTTAGATGGTAACCATGGAAAAGGAAGATTTTAAAACTATCCCAAAATTGGTCTAAAAAGCAAAGAAAACATTTGTTGAATCACAAATGACAAACAATCAATCAATCAATCTACTTCATATCTTCGGACCATGATAATAATTTTGTAGGTTTTGTTCATATGGCTCATTGTTTTCCAAAAATTCTCATAATATTATTTGTGTTCTTGAAGTATGCTTGTAGGAAGTCATTGGCCGATAGTCGACCAAGGATTAGAGGACGATTTGCAAGGTACAACGATGACGTTGCAAAGAATTATCCAGAGCAATGGAGTCATGGGCAAGAGGAAGAACAAGGAGAAGAAGAAGAAGAAGAGGCAAATTGTGATGATAATTGGATCAAGTACTTTGTAGATGCATATTCTACGAATCTTATTCCATGA

mRNA sequence

ATGACAATCTCCCACTTTCTCTCCGCCGCCTCGCATTCCTCCACCGACACCGCCGGTGTTGATTTTGACTGGTTACCCGGTTCCTCCATCAAGCAATGGAACTCTGAACTTCCCGACAGCTGGGGCGACGGTTCACTGACTTCACCGCCGCAACCCCAAACAATTCATCCACCAACTAACAATATTCTATTTCACCAATCTTTTAGCCTCCTCAACCCTTCTCTCAAAACCAATGGCCTTCTTCAACAAACCGGTTCGTCGCCGTCGCCGTCGCCGCCACCGCCGCTCTCCTCCGATAACGTCCTACACAAGCTATCCCTTCCCGCCGGTGATTTTCAGAGGAATAATCAGAGAGCAGAGAGTCCAGTTTCATGTGAAAGTAGCATCGCCATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCAGAAGAGAAGAAGGAGAGAATTCAAAGGTATAGGAGCAAAAGAAACCAGAGGAACTTCAACAAGAAGATTAAGTATGCTTGTAGGAAGTCATTGGCCGATAGTCGACCAAGGATTAGAGGACGATTTGCAAGGTACAACGATGACGTTGCAAAGAATTATCCAGAGCAATGGAGTCATGGGCAAGAGGAAGAACAAGGAGAAGAAGAAGAAGAAGAGGCAAATTGTGATGATAATTGGATCAAGTACTTTGTAGATGCATATTCTACGAATCTTATTCCATGA

Coding sequence (CDS)

ATGACAATCTCCCACTTTCTCTCCGCCGCCTCGCATTCCTCCACCGACACCGCCGGTGTTGATTTTGACTGGTTACCCGGTTCCTCCATCAAGCAATGGAACTCTGAACTTCCCGACAGCTGGGGCGACGGTTCACTGACTTCACCGCCGCAACCCCAAACAATTCATCCACCAACTAACAATATTCTATTTCACCAATCTTTTAGCCTCCTCAACCCTTCTCTCAAAACCAATGGCCTTCTTCAACAAACCGGTTCGTCGCCGTCGCCGTCGCCGCCACCGCCGCTCTCCTCCGATAACGTCCTACACAAGCTATCCCTTCCCGCCGGTGATTTTCAGAGGAATAATCAGAGAGCAGAGAGTCCAGTTTCATGTGAAAGTAGCATCGCCATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCAGAAGAGAAGAAGGAGAGAATTCAAAGGTATAGGAGCAAAAGAAACCAGAGGAACTTCAACAAGAAGATTAAGTATGCTTGTAGGAAGTCATTGGCCGATAGTCGACCAAGGATTAGAGGACGATTTGCAAGGTACAACGATGACGTTGCAAAGAATTATCCAGAGCAATGGAGTCATGGGCAAGAGGAAGAACAAGGAGAAGAAGAAGAAGAAGAGGCAAATTGTGATGATAATTGGATCAAGTACTTTGTAGATGCATATTCTACGAATCTTATTCCATGA

Protein sequence

MTISHFLSAASHSSTDTAGVDFDWLPGSSIKQWNSELPDSWGDGSLTSPPQPQTIHPPTNNILFHQSFSLLNPSLKTNGLLQQTGSSPSPSPPPPLSSDNVLHKLSLPAGDFQRNNQRAESPVSCESSIAIEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVAKNYPEQWSHGQEEEQGEEEEEEANCDDNWIKYFVDAYSTNLIP
BLAST of Carg20259 vs. NCBI nr
Match: XP_022946965.1 (zinc finger protein CONSTANS-LIKE 14-like [Cucurbita moschata])

HSP 1 Score: 419.9 bits (1078), Expect = 5.9e-114
Identity = 223/235 (94.89%), Postives = 225/235 (95.74%), Query Frame = 0

Query: 1   MTISHFLSAASHSSTDTAGVDFDWLPGSSIKQWNSELPDSWGDGSLTSPPQPQTIHPPTN 60
           MTISHFLSAASHSSTDTAGVDFDWLPGSSIKQWNSELPDSWGDGSLTSPPQPQTIHPPTN
Sbjct: 1   MTISHFLSAASHSSTDTAGVDFDWLPGSSIKQWNSELPDSWGDGSLTSPPQPQTIHPPTN 60

Query: 61  NILFHQSFSLLNPSLKTNGLLQQTGSSXXXXXXXXLSSDNVLHKLSLPAGDFQRNNQRAE 120
           NILFH +FSLLNPSLKTNGLLQQTGSS        LSSDNVLHKLSLPA DFQRNNQRAE
Sbjct: 61  NILFHHTFSLLNPSLKTNGLLQQTGSS----PSPSLSSDNVLHKLSLPARDFQRNNQRAE 120

Query: 121 SPVSCESSIAIEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRI 180
           SPVSCESSIAIEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRI
Sbjct: 121 SPVSCESSIAIEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRI 180

Query: 181 RGRFARYNDDVAKNYPEQWSHGQXXXXXXXXXXXXNCDDNWIKYFVDAYSTNLIP 236
           RGRFA+YNDDVAKNYPEQWSHGQXXXXXXXXXXXXNCDDNWIKYFVDAYSTNLIP
Sbjct: 181 RGRFAKYNDDVAKNYPEQWSHGQXXXXXXXXXXXXNCDDNWIKYFVDAYSTNLIP 231

BLAST of Carg20259 vs. NCBI nr
Match: XP_023532290.1 (two-component response regulator-like PRR1 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532291.1 two-component response regulator-like PRR1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411.4 bits (1056), Expect = 2.1e-111
Identity = 226/235 (96.17%), Postives = 227/235 (96.60%), Query Frame = 0

Query: 1   MTISHFLSAASHSSTDTAGVDFDWLPGSSIKQWNSELPDSWGDGSLTSPPQPQTIHPPTN 60
           MTISHFLSAASHSSTDTAGVDFDWLPGSSIKQWNSELPDSWGDGSLTSPPQPQTIHPPTN
Sbjct: 1   MTISHFLSAASHSSTDTAGVDFDWLPGSSIKQWNSELPDSWGDGSLTSPPQPQTIHPPTN 60

Query: 61  NILFHQSFSLLNPSLKTNGLLQQTGSSXXXXXXXXLSSDNVLHKLSLPAGDFQRNNQRAE 120
           NILFH +FSLLNP LKTNGLLQQTG  XXXXXXXX  SDNVLHKLSLPAGDFQRNNQRAE
Sbjct: 61  NILFHHTFSLLNPYLKTNGLLQQTG-XXXXXXXXXXXSDNVLHKLSLPAGDFQRNNQRAE 120

Query: 121 SPVSCESSIAIEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRI 180
           SPVSCESSIAIEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRI
Sbjct: 121 SPVSCESSIAIEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRI 180

Query: 181 RGRFARYNDDVAKNYPEQWSHGQXXXXXXXXXXXXNCDDNWIKYFVDAYSTNLIP 236
           RGRFARYNDDVAKNYP QWSHGQ XXXXXXXXXXXNCDDNWIKYFVDAYSTNLIP
Sbjct: 181 RGRFARYNDDVAKNYPVQWSHGQEXXXXXXXXXXXNCDDNWIKYFVDAYSTNLIP 234

BLAST of Carg20259 vs. NCBI nr
Match: XP_023007329.1 (two-component response regulator-like PRR1 [Cucurbita maxima])

HSP 1 Score: 375.6 bits (963), Expect = 1.3e-100
Identity = 214/235 (91.06%), Postives = 217/235 (92.34%), Query Frame = 0

Query: 1   MTISHFLSAASHSSTDTAGVDFDWLPGSSIKQWNSELPDSWGDGSLTSPPQPQTIHPPTN 60
           MTISHFLSAASHSSTDTAGVDFDWLP SSIKQWNSELPDSWGDGSLTSPPQPQTI PPTN
Sbjct: 1   MTISHFLSAASHSSTDTAGVDFDWLPCSSIKQWNSELPDSWGDGSLTSPPQPQTIRPPTN 60

Query: 61  NILFHQSFSLLNPSLKTNGLLQQTGSSXXXXXXXXLSSDNVLHKLSLPAGDFQRNNQRAE 120
           NILFH +FSLLNPSLKTNGL       XXXXXXXX   D + HKLSLPAGDFQRNNQRAE
Sbjct: 61  NILFHHTFSLLNPSLKTNGL---XXXXXXXXXXXXXXXDILQHKLSLPAGDFQRNNQRAE 120

Query: 121 SPVSCESSIAIEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRI 180
           SPVSCESSIAI+GMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRI
Sbjct: 121 SPVSCESSIAIDGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRI 180

Query: 181 RGRFARYNDDVAKNYPEQWSHGQXXXXXXXXXXXXNCDDNWIKYFVDAYSTNLIP 236
           RGRFARYN DVAKNYP QWSHG XXXXXXXXXXXXNCDDNWIKYFVDAYSTNLIP
Sbjct: 181 RGRFARYNYDVAKNYPVQWSHG-XXXXXXXXXXXXNCDDNWIKYFVDAYSTNLIP 231

BLAST of Carg20259 vs. NCBI nr
Match: XP_022986933.1 (uncharacterized protein LOC111484524 isoform X1 [Cucurbita maxima])

HSP 1 Score: 284.3 bits (726), Expect = 3.9e-73
Identity = 171/241 (70.95%), Postives = 188/241 (78.01%), Query Frame = 0

Query: 1   MTISHFLSAASHSSTDTAGVDFDWLPGSSIKQWNSELPDSWGDGSLTSPPQPQTIHPPTN 60
           M  S FLSA SHSS D A VDFDWLP SS+K W SE+ DS GDGS TSPPQP T   PTN
Sbjct: 1   MAFSPFLSAVSHSSADLASVDFDWLPDSSVKLWKSEVSDSCGDGSATSPPQPLTFRRPTN 60

Query: 61  NILFHQSFSLLNPSLKTNGLLQQTGSSXXXXXXXXLSSDNVLHKLSLPAGDF-----QRN 120
             L  QSFSLLNPSL+T          XXXXXXXX   ++++ +    AGDF     QRN
Sbjct: 61  RFLLDQSFSLLNPSLRTTXXXXXXXXXXXXXXXXXXXXESLVSRPLFQAGDFKEWGWQRN 120

Query: 121 NQRAESPVSCESSIAIEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLAD 180
            QRAESPVSCESSI IEG+SRACRYSPEEKKERI+RY+SKRNQRNFNKKIKYACRKSLAD
Sbjct: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIKYACRKSLAD 180

Query: 181 SRPRIRGRFARYNDDVAKNYPEQWSHGQXXXXXXXXXXXXNCDDNWIKYFVDAYST-NLI 236
           SRPRIRGRFARYND+VAKN+P +WSHGQ  XXXXXXXXXX   +NWIKYF+DAYS+ NLI
Sbjct: 181 SRPRIRGRFARYNDNVAKNFPMKWSHGQ--XXXXXXXXXXXXXENWIKYFIDAYSSANLI 239

BLAST of Carg20259 vs. NCBI nr
Match: XP_022944273.1 (uncharacterized protein LOC111448769 isoform X1 [Cucurbita moschata])

HSP 1 Score: 283.5 bits (724), Expect = 6.6e-73
Identity = 173/241 (71.78%), Postives = 187/241 (77.59%), Query Frame = 0

Query: 1   MTISHFLSAASHSSTDTAGVDFDWLPGSSIKQWNSELPDSWGDGSLTSPPQPQTIHPPTN 60
           M  S FLSA SHSS D A VDFDWLP SSIK WNSE+ +S GDGS TSPPQP T   PTN
Sbjct: 1   MAFSPFLSAVSHSSADLASVDFDWLPDSSIKLWNSEVSNSCGDGSPTSPPQPLTFRRPTN 60

Query: 61  NILFHQSFSLLNPSLKTNGLLQQTGSSXXXXXXXXLSSDNVLHKLSLPAGDF-----QRN 120
             L  QSF LLNPSL+T          XXXXXXXX    +++ +   PAGDF     QRN
Sbjct: 61  RFLLDQSFGLLNPSLQTXXXXXXXXXXXXXXXXXXXXXXSLVSRPLFPAGDFKEWGWQRN 120

Query: 121 NQRAESPVSCESSIAIEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLAD 180
            QRAESPVSCESSI IEG+SRACRYSPEEKKERI+RY+SKRNQRNFNKKIKYACRKSLAD
Sbjct: 121 KQRAESPVSCESSITIEGLSRACRYSPEEKKERIERYKSKRNQRNFNKKIKYACRKSLAD 180

Query: 181 SRPRIRGRFARYNDDVAKNYPEQWSHGQXXXXXXXXXXXXNCDDNWIKYFVDAYST-NLI 236
           SRPRIRGRFARYND+VAKN P QWSHGQ  XXXXXXXXXX   +NWIKYF+DAYS+ NLI
Sbjct: 181 SRPRIRGRFARYNDNVAKNCPMQWSHGQ--XXXXXXXXXXXXXENWIKYFIDAYSSANLI 239

BLAST of Carg20259 vs. TAIR10
Match: AT5G59990.1 (CCT motif family protein)

HSP 1 Score: 101.7 bits (252), Expect = 6.4e-22
Identity = 55/88 (62.50%), Postives = 69/88 (78.41%), Query Frame = 0

Query: 106 SLPAGDFQRNNQRAESPVSCESSIAIEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKI 165
           +L AGD  R+++R  S V  ES+  IEGMS+A +YSPEEKKE+I     KRN RNFNK+I
Sbjct: 124 ALSAGDLPRSSRRESSTVWSESNAIIEGMSKAYKYSPEEKKEKIXXXXXKRNLRNFNKRI 183

Query: 166 KYACRKSLADSRPRIRGRFARYNDDVAK 194
           KY CRK+LADSRPRIRGRFAR ND++++
Sbjct: 184 KYECRKTLADSRPRIRGRFAR-NDEISQ 210

BLAST of Carg20259 vs. TAIR10
Match: AT1G63820.1 (CCT motif family protein)

HSP 1 Score: 81.6 bits (200), Expect = 6.9e-16
Identity = 47/79 (59.49%), Postives = 58/79 (73.42%), Query Frame = 0

Query: 121 SPVSCESSIAI-----EGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLAD 180
           SP++ ESS        E   R  RYS EE+KE+I +YR+KR QRNF K IKYACRK+LAD
Sbjct: 163 SPLAAESSPTTVFSGDEQSLRVGRYSSEERKEKISKYRAKRTQRNFTKTIKYACRKTLAD 222

Query: 181 SRPRIRGRFARYNDDVAKN 195
           +RPR+RGRFAR ND+V +N
Sbjct: 223 NRPRVRGRFAR-NDEVFEN 240

BLAST of Carg20259 vs. TAIR10
Match: AT2G33350.1 (CCT motif family protein)

HSP 1 Score: 77.8 bits (190), Expect = 9.9e-15
Identity = 38/57 (66.67%), Postives = 51/57 (89.47%), Query Frame = 0

Query: 134 MSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDD 191
           +++  + SPE++KE+I+RY  KRN+RNFNKKIKYACRK+LADSRPR+RGRFA+ ND+
Sbjct: 300 LNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAK-NDE 355

BLAST of Carg20259 vs. TAIR10
Match: AT3G12890.1 (activator of spomin::LUC2)

HSP 1 Score: 76.3 bits (186), Expect = 2.9e-14
Identity = 40/64 (62.50%), Postives = 47/64 (73.44%), Query Frame = 0

Query: 126 ESSIAIEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRIRGRFA 185
           E  I  E  ++  RYS EE+K+RI RY  K+NQRNFNK IKY CRK+LAD R R+RGRFA
Sbjct: 120 EGGIQAEPNTKVGRYSVEERKDRIMRYLKKKNQRNFNKTIKYVCRKTLADRRVRVRGRFA 179

Query: 186 RYND 190
           R ND
Sbjct: 180 RNND 183

BLAST of Carg20259 vs. TAIR10
Match: AT5G41380.1 (CCT motif family protein)

HSP 1 Score: 76.3 bits (186), Expect = 2.9e-14
Identity = 45/84 (53.57%), Postives = 54/84 (64.29%), Query Frame = 0

Query: 110 GDFQRNNQRAESPVSCESSIAIEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYAC 169
           GD Q N +   S  +     + E   +  RYS EE+KE      +KRNQRNF K IKYAC
Sbjct: 180 GDLQNNMEMQRSSENSTMPFSEEQNFKVGRYSAEERKEXXXXXXAKRNQRNFTKTIKYAC 239

Query: 170 RKSLADSRPRIRGRFARYNDDVAK 194
           RK+LADSRPRIRGRFAR ND+V +
Sbjct: 240 RKTLADSRPRIRGRFAR-NDEVVE 262

BLAST of Carg20259 vs. Swiss-Prot
Match: sp|Q9SK53|COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0

Query: 137 ACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 190
           A + SP E++ R+ RYR KR  R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 221 AVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 273

BLAST of Carg20259 vs. Swiss-Prot
Match: sp|Q940T9|COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06
Identity = 31/68 (45.59%), Postives = 41/68 (60.29%), Query Frame = 0

Query: 127 SSIAIEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRIRGRFAR 186
           +S A  G  RA   +  E++ R+ RYR KR  R F K I+YA RK+ A+ RPRI+GRFA+
Sbjct: 277 TSGADPGTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAK 336

Query: 187 YNDDVAKN 195
             D    N
Sbjct: 337 RTDTNESN 344

BLAST of Carg20259 vs. Swiss-Prot
Match: sp|O50055|COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.1e-06
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0

Query: 141 SPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 190
           SP +++ R+ RYR K+  R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 282 SPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKD 330

BLAST of Carg20259 vs. Swiss-Prot
Match: sp|Q9FHH8|COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 1.8e-05
Identity = 28/55 (50.91%), Postives = 38/55 (69.09%), Query Frame = 0

Query: 141 SPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRIRGRFAR----YNDDV 192
           S  +++ R+ RYR KR  R F K I+YA RK+ A+SRPRI+GRFA+     NDD+
Sbjct: 281 SSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDDI 335

BLAST of Carg20259 vs. Swiss-Prot
Match: sp|O82117|CO3_ORYSJ (Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.1e-05
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 0

Query: 144 EKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 190
           +++ R+ RYR KR  R F K I+YA RK+ A++RPRI+GRFA+ +D
Sbjct: 267 DREARVHRYREKRKTRRFEKTIRYASRKAYAETRPRIKGRFAKRSD 312

BLAST of Carg20259 vs. TrEMBL
Match: tr|A0A0A0KG14|A0A0A0KG14_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301610 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 3.8e-69
Identity = 176/248 (70.97%), Postives = 192/248 (77.42%), Query Frame = 0

Query: 1   MTISHFLSAASHSSTDTAGVDFDWLPGSSIKQWNS-ELPDSWGDGSLTSPPQPQTIHPPT 60
           M  S FLSAASHSS D AGVDFDWLP SSIK WNS +  DS GDGS  SPP+P  I P T
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPST 60

Query: 61  NNILFHQS-FSLLNP----SLKTNGLLQQTGSSXXXXXXXXLSSDNVLHKLSLPAGDFQR 120
           NN L H S F LLNP    S  T+  LQ+T SSXXXXXX  +  D  +++   P GDFQ+
Sbjct: 61  NNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSXXXXXXAAI--DPPINRPLFPVGDFQK 120

Query: 121 ---NNQRA-ESPVSCESSIA-IEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYAC 180
              NN+R  ESPVSCESSI  IEGMSRACRYSPEEKKERI+RYR+KR+QRNFNKKIKYAC
Sbjct: 121 KNNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYAC 180

Query: 181 RKSLADSRPRIRGRFARYNDDVAKNYPEQWS-HGQXXXXXXXXXXXXN-CDDNWIKYFVD 236
           RKSLADSRPRIRGRFARYND+V KNYP QW+ H  XXXXXXXXXXXXN C DNWIKYF+D
Sbjct: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHXXXXXXXXXXXXXXNSCGDNWIKYFID 240

BLAST of Carg20259 vs. TrEMBL
Match: tr|A0A1S3CK56|A0A1S3CK56_CUCME (zinc finger protein CONSTANS-LIKE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501889 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.2e-68
Identity = 161/242 (66.53%), Postives = 174/242 (71.90%), Query Frame = 0

Query: 1   MTISHFLSAASHSSTDTAGVDFD-WLPGSSIKQWNSELPDSWGDGSLTSPPQPQTIHPPT 60
           M  S FLSAASHSS D AGVDFD WLP SSIK WNSE  DS GDGS  SPP+P  IHP T
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNILFHQSFSLLN-PSLK-TNGLLQQTGSSXXXXXXXXLSSDNVLHKLSLPAGDFQR--N 120
           NN L HQSF LLN  SL+            XXXXXXXX      +++   PAGDFQ+  N
Sbjct: 61  NNFLLHQSFPLLNHDSLQXXXXXXXXXXXXXXXXXXXXXXXXXXINRPLFPAGDFQKKNN 120

Query: 121 NQRA-ESPVSCESSIA-IEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSL 180
           N+R  ESPVSCESSI  IEGMSRACRYSPEEKKERI+RYR+KRNQRNFNKKIKYACRKSL
Sbjct: 121 NERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSL 180

Query: 181 ADSRPRIRGRFARYNDDVAKNYPEQWSHGQXXXXXXXXXXXXNCDDNWIKYFVDAYSTNL 236
           ADSRPRIRGRFARYND+V KNYP QW+               +C DNWIKYF+D YS NL
Sbjct: 181 ADSRPRIRGRFARYNDEVVKNYPVQWN--LQREEEQQQREANSCGDNWIKYFIDTYSANL 240

BLAST of Carg20259 vs. TrEMBL
Match: tr|A0A1S3CK62|A0A1S3CK62_CUCME (zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501889 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.2e-68
Identity = 161/243 (66.26%), Postives = 175/243 (72.02%), Query Frame = 0

Query: 1   MTISHFLSAASHSSTDTAGVDFD-WLPGSSIKQWNSELPDSWGDGSLTSPPQPQTIHPPT 60
           M  S FLSAASHSS D AGVDFD WLP SSIK WNSE  DS GDGS  SPP+P  IHP T
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNILFHQSFSLLN-PSLKT-NGLLQQTGSSXXXXXXXXLSSDNVLHKLSLPAGDFQR--- 120
           NN L HQSF LLN  SL++           XXXXXXXX      +++   PAGDFQ+   
Sbjct: 61  NNFLLHQSFPLLNHDSLQSXXXXXXXXXXXXXXXXXXXXXXXXXINRPLFPAGDFQQKKN 120

Query: 121 NNQRA-ESPVSCESSIA-IEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKS 180
           NN+R  ESPVSCESSI  IEGMSRACRYSPEEKKERI+RYR+KRNQRNFNKKIKYACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180

Query: 181 LADSRPRIRGRFARYNDDVAKNYPEQWSHGQXXXXXXXXXXXXNCDDNWIKYFVDAYSTN 236
           LADSRPRIRGRFARYND+V KNYP QW+               +C DNWIKYF+D YS N
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWN--LQREEEQQQREANSCGDNWIKYFIDTYSAN 240

BLAST of Carg20259 vs. TrEMBL
Match: tr|A0A2N9E254|A0A2N9E254_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS858 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 9.8e-33
Identity = 92/172 (53.49%), Postives = 109/172 (63.37%), Query Frame = 0

Query: 69  SLLNPSLKTNGLLQQTGSSXXXXXXXXLSSDNVLHKLSLPAGDFQRNN-----QRAESPV 128
           S+ + SL  NG  Q   SS        + S++   +     GD QR N      R+ESP+
Sbjct: 96  SVSSHSLLKNGFRQFVSSS----THEFVDSESGPVRRVFSTGDLQRINMVQHGHRSESPL 155

Query: 129 SCESSIAIEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKKIKYACRKSLADSRPRIRGR 188
           S E+SI IE MSRACRYSPEEKKERI+RYRSKR QRNFNKKIKYACRK+LADSRPRIRGR
Sbjct: 156 SNENSIIIESMSRACRYSPEEKKERIERYRSKRTQRNFNKKIKYACRKTLADSRPRIRGR 215

Query: 189 FARYNDDVAKNYPEQWSHGQXXXXXXXXXXXXNCDDNWIKYFVDAYSTNLIP 236
           FAR ND++ KN   QWSH                DDNWI  F+D +S N++P
Sbjct: 216 FAR-NDEIEKNPQVQWSH-------IGGEEDEEDDDNWIN-FIDTFSANMVP 254

BLAST of Carg20259 vs. TrEMBL
Match: tr|A0A2R6QT85|A0A2R6QT85_ACTCH (Zinc finger protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc14917 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.1e-31
Identity = 81/131 (61.83%), Postives = 96/131 (73.28%), Query Frame = 0

Query: 110 GDFQR-----NNQRAESPVSCESSIAIEGMSRACRYSPEEKKERIQRYRSKRNQRNFNKK 169
           GD QR     +  R+ESP+S E+S  IEGMS+ACRYSPEEKKERI+RYRSKRNQRNFNKK
Sbjct: 128 GDLQRIKMVQDYHRSESPLSNENSSIIEGMSKACRYSPEEKKERIERYRSKRNQRNFNKK 187

Query: 170 IKYACRKSLADSRPRIRGRFARYNDDVAKNYPEQWSHGQXXXXXXXXXXXXNCDDNWIKY 229
           IKYACRK+LADSRPRIRGRFAR ND++ K+   QWSH                +DNWI  
Sbjct: 188 IKYACRKTLADSRPRIRGRFAR-NDEIEKSLENQWSH------TGGEEEYDEDEDNWIN- 247

Query: 230 FVDAYSTNLIP 236
           F+D++S NL+P
Sbjct: 248 FLDSFSANLVP 250

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022946965.15.9e-11494.89zinc finger protein CONSTANS-LIKE 14-like [Cucurbita moschata][more]
XP_023532290.12.1e-11196.17two-component response regulator-like PRR1 isoform X1 [Cucurbita pepo subsp. pep... [more]
XP_023007329.11.3e-10091.06two-component response regulator-like PRR1 [Cucurbita maxima][more]
XP_022986933.13.9e-7370.95uncharacterized protein LOC111484524 isoform X1 [Cucurbita maxima][more]
XP_022944273.16.6e-7371.78uncharacterized protein LOC111448769 isoform X1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT5G59990.16.4e-2262.50CCT motif family protein[more]
AT1G63820.16.9e-1659.49CCT motif family protein[more]
AT2G33350.19.9e-1566.67CCT motif family protein[more]
AT3G12890.12.9e-1462.50activator of spomin::LUC2[more]
AT5G41380.12.9e-1453.57CCT motif family protein[more]
Match NameE-valueIdentityDescription
sp|Q9SK53|COL3_ARATH1.6e-0652.83Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1... [more]
sp|Q940T9|COL4_ARATH1.6e-0645.59Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2... [more]
sp|O50055|COL1_ARATH8.1e-0651.02Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1... [more]
sp|Q9FHH8|COL5_ARATH1.8e-0550.91Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2... [more]
sp|O82117|CO3_ORYSJ3.1e-0552.17Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0KG14|A0A0A0KG14_CUCSA3.8e-6970.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301610 PE=4 SV=1[more]
tr|A0A1S3CK56|A0A1S3CK56_CUCME4.2e-6866.53zinc finger protein CONSTANS-LIKE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A1S3CK62|A0A1S3CK62_CUCME4.2e-6866.26zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A2N9E254|A0A2N9E254_FAGSY9.8e-3353.49Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS858 PE=4 SV=1[more]
tr|A0A2R6QT85|A0A2R6QT85_ACTCH1.1e-3161.83Zinc finger protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20259-RACarg20259-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010402CCT domainPFAMPF06203CCTcoord: 146..186
e-value: 1.3E-17
score: 63.5
IPR010402CCT domainPROSITEPS51017CCTcoord: 145..187
score: 15.567
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..216
NoneNo IPR availablePANTHERPTHR31319:SF22CCT MOTIF FAMILY PROTEINcoord: 67..215
NoneNo IPR availablePANTHERPTHR31319FAMILY NOT NAMEDcoord: 67..215

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg20259Cla008269Watermelon (97103) v1carwmB0299
Carg20259Csa1G497300Cucumber (Chinese Long) v2carcuB0330
Carg20259Csa6G301610Cucumber (Chinese Long) v2carcuB0334
Carg20259MELO3C020684Melon (DHL92) v3.5.1carmeB0309
Carg20259MELO3C025709Melon (DHL92) v3.5.1carmeB0307
Carg20259ClCG03G001780Watermelon (Charleston Gray)carwcgB0301
Carg20259ClCG02G020570Watermelon (Charleston Gray)carwcgB0298
Carg20259CSPI06G16590Wild cucumber (PI 183967)carcpiB0340
Carg20259CSPI01G22660Wild cucumber (PI 183967)carcpiB0337
Carg20259Cucsa.213590Cucumber (Gy14) v1carcgyB0360
Carg20259Cucsa.379690Cucumber (Gy14) v1carcgyB0362
Carg20259CmaCh01G005780Cucurbita maxima (Rimu)carcmaB0423
Carg20259CmaCh02G008470Cucurbita maxima (Rimu)carcmaB0425
Carg20259CmaCh20G004430Cucurbita maxima (Rimu)carcmaB0424
Carg20259CmoCh20G004800Cucurbita moschata (Rifu)carcmoB0420
Carg20259CmoCh02G008490Cucurbita moschata (Rifu)carcmoB0421
Carg20259CmoCh01G006030Cucurbita moschata (Rifu)carcmoB0419
Carg20259Lsi10G013310Bottle gourd (USVL1VR-Ls)carlsiB279
Carg20259Cp4.1LG02g13080Cucurbita pepo (Zucchini)carcpeB0427
Carg20259Cp4.1LG05g08790Cucurbita pepo (Zucchini)carcpeB0429
Carg20259Cp4.1LG16g05760Cucurbita pepo (Zucchini)carcpeB0423
Carg20259CsGy1G022200Cucumber (Gy14) v2carcgybB0316
Carg20259CsGy6G016150Cucumber (Gy14) v2carcgybB0318
Carg20259MELO3C020684.2Melon (DHL92) v3.6.1carmedB0318
Carg20259MELO3C025709.2Melon (DHL92) v3.6.1carmedB0317
Carg20259CsaV3_6G022010Cucumber (Chinese Long) v3carcucB0339
Carg20259CsaV3_1G033810Cucumber (Chinese Long) v3carcucB0336
Carg20259Cla97C02G046550Watermelon (97103) v2carwmbB0314
Carg20259Cla97C03G052770Watermelon (97103) v2carwmbB0317
Carg20259Bhi10G000523Wax gourdcarwgoB0392
Carg20259Bhi08G000570Wax gourdcarwgoB0393
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg20259Carg03281Silver-seed gourdcarcarB330
Carg20259Carg12350Silver-seed gourdcarcarB332