MELO3C020684 (gene) Melon (DHL92) v3.5.1

NameMELO3C020684
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionZinc finger protein CONSTANS-LIKE 1
Locationchr12 : 2551273 .. 2554479 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCCACAAACCCAATAAAAATTCAAACTCTTCTCCCTCCTCCTTCTTCCCTCCGCCACCACATCATGCATAGCTTCTCCCCCGCCGTTGACACCTCCATCTTCCACCTCCACTCCCCCGACCTCATTGTTTCGTCGTCGCCGCCACTCTTTCCATCATTCCCTAACTTCTCCTCTTCTCATTCCTCTTCCTTTCTCCTAGCATATAGCCAGCTCGCTCTGGACCCGGTGCTCGAGTCACCTGACCTTTTACCCTTAGAGGTGATCAGTTATAGTGGTAGTAGTGGACCTTGTAGTAGCTACGGGTCTCCCACGTCATCGCAACCTGCCCTAATACAGCGGAGCATGAGTAGCCAATCACTCCAAAAGGATAGGGTAAGGCATGGACCGGGTGCTAGGATTTCCTCGTTGATCGACACGGATATGCCGGCCGTGAGAAGGGTTTACAGCTCCGGTGATTTGCAGGTGAACCCCAAAATTGGCTGCAAAATTATAGTGTTTCATTATTCCTTCGCACTTATTAAGACATTGCATCTTAACACTTATTGTCTTTGAGAATCATCTGACTCTTTATAAAATCATAATCAAACACACCAATTATTTGTCCCACATTTGTCAAACACACCAATTATTTTACAACAATTTGAGCAAATATAATTAATGGTATAATTATTGTAGCTAACATATATGTTTTGAAATCTATTTATTTTACCATTAAGTAAATAATATGTTTCTCTTGTAAATAGAGAACAATATACTAAAAAGAATTTCTTATGAAATAATTCAGGGAAGAACAGAAAGAGGATGCTCAAGTGAAAGCAGTTTGATAATAGAAGGAATGACCAAAGCTTGTAGATATAGTCCTGAAGAGAAGAAAGAGAGAATTGAAAGATATAAATCCAAAAGAAATCAAAGGAATTTTAATAAGAAGATTAAGGTAATTATTTATTTTTCACATTATTATTATTAAGTGCATTTTTAAACGACCAAAATATTTACAAAATATATTAAAATCTTAGATATATTTTGTAAATATTTTTAACGATTTTTTCATTTACAATAATTTTTTTATTATTGTTCTACAACCAATACTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTACATGATCTATCGATGATAGACTCCTATCATTGATAGATTTTGACAAATTTTGCTATATTTGCAAATTTTTTAAAATGTTGCTATATACTTAATTATTTTGAATATAATTGCTACATTTGCAACTATCCATTTTTCTATAAATAGTAGACAATATAGATTCGTGAATTTTAAAAATAAAAGCAATCGTTAGAGAACAAATTTAAAAGTCTATTAACCTATTAGACTCGAAATTTAAATCTATAGATCTATTATAAAGTTTAAAACATATTTGACACGGTTGAATAATTAGACTTGAAACTTAACTTACTATATTTTATATTTAAAAAACATTTCTTCTTCTTTCCCTGCTTTCTTTTTCCTTTCTACCTTTTACGTAAACTATTACTATGATAAACACATAAATTATAATTGGGATAAACTATTAATTCTTTTAGAAAAAAGTTTATTATGCGATGTATATTTTCAGAGTTAAAATCAATTTTATTTCATATTATCTATCTACCATATATGGTGATAGGCCTATCACACATATAGTAATAATCTATCGAAGAAAATTAAAAACAATCATTACCACAAAGTTATGATCATCAAAATTTCACTTTGAGATTAAAATATAATTAAGTAGGCAAATAATTAGTGCTTTTTTTTTTACTTTTTCCTACATGAATATGATTTAGAAAGAGAAGAAATAAAGAGACAAGATATTTCTAAAATAATTGAACCATTTTGGAAGTTAAAAGACAAAGTGGAGTGAAAAATGATTGTGGATAGGGTTTCTATTCATATGTAGCTAACAATAGTGATATGTTATTTTTCCACTCCAATCACATTTTTAATTGAATTTTTCTTCAATATTCTCCTCCTTCAAATAAAGTTGTTTAAAACAAAAACAATTCATTAATTTAAACTTTTTAATATTGTCACACTTTTATATTTGTGTATAATCAATGCTTAGATTTTTTTAAAAAAAATTCTAGTGATTTTGTTTTTAATAAGTTCCTAAAAGTTTATATAAAATGTGTCATTCAACCTATTTGAACTATTTAAAAAGTTTATGAACTTAATGGCCATATAATAATCAAATTTAGAGAACTATTTGAAATATTTTTTTAATAAGTTGAACTTAGTAGACAGGGGAGTTATAAAAAAATAGCAAATTTGACATAATATTTACAAAATAAAGCAAAATTTCATATTCTATTAATGATAGACATTGATAATTACTGATATAATTCTATTAGTAACATTGATAGACAATGATAGAAGTATCAGTGTCTATAATTGAAAGGATCCAAAATGTTTGCTATTTTGCTATATTTAAAAATGCTTCTAGTAGATACGTAAATATGAAAGTTCAAATACAATTAGATTATATATATATTTTTAAAGTTGGAAAATGAAAGCTATATGGATTAATTAATTTAACGGTAACTTTTATTTATATTTTCATAATTAATCTCGATCTTTAGTGAAACACCACTTGTTAATCTAATCACCACTTGTTAATCTAATCATTTGTTACATAAATTGATAGTATGAGTGTAGAAAAACATTGGCGGATAGTAGAAGACGAATAAGAGGAAGATTCGCAAGAAACGAAGAAATTGAAAACAGTAACTCCACCAGCTCTCCATTAGAGGCATGGAGCTGTTATGATAATCCCATGGTGAAGGAATTAGACACCACCCAAGATGATGGCTCATGGATCACCTTCCTTGATTCTTACCATTGTTAAATTAATAAATTAAAAA

mRNA sequence

ATTCCACAAACCCAATAAAAATTCAAACTCTTCTCCCTCCTCCTTCTTCCCTCCGCCACCACATCATGCATAGCTTCTCCCCCGCCGTTGACACCTCCATCTTCCACCTCCACTCCCCCGACCTCATTGTTTCGTCGTCGCCGCCACTCTTTCCATCATTCCCTAACTTCTCCTCTTCTCATTCCTCTTCCTTTCTCCTAGCATATAGCCAGCTCGCTCTGGACCCGGTGCTCGAGTCACCTGACCTTTTACCCTTAGAGGTGATCAGTTATAGTGGTAGTAGTGGACCTTGTAGTAGCTACGGGTCTCCCACGTCATCGCAACCTGCCCTAATACAGCGGAGCATGAGTAGCCAATCACTCCAAAAGGATAGGGTAAGGCATGGACCGGGTGCTAGGATTTCCTCGTTGATCGACACGGATATGCCGGCCGTGAGAAGGGTTTACAGCTCCGGTGATTTGCAGGGAAGAACAGAAAGAGGATGCTCAAGTGAAAGCAGTTTGATAATAGAAGGAATGACCAAAGCTTGTAGATATAGTCCTGAAGAGAAGAAAGAGAGAATTGAAAGATATAAATCCAAAAGAAATCAAAGGAATTTTAATAAGAAGATTAAGTATGAGTGTAGAAAAACATTGGCGGATAGTAGAAGACGAATAAGAGGAAGATTCGCAAGAAACGAAGAAATTGAAAACAGTAACTCCACCAGCTCTCCATTAGAGGCATGGAGCTGTTATGATAATCCCATGGTGAAGGAATTAGACACCACCCAAGATGATGGCTCATGGATCACCTTCCTTGATTCTTACCATTGTTAAATTAATAAATTAAAAA

Coding sequence (CDS)

ATGCATAGCTTCTCCCCCGCCGTTGACACCTCCATCTTCCACCTCCACTCCCCCGACCTCATTGTTTCGTCGTCGCCGCCACTCTTTCCATCATTCCCTAACTTCTCCTCTTCTCATTCCTCTTCCTTTCTCCTAGCATATAGCCAGCTCGCTCTGGACCCGGTGCTCGAGTCACCTGACCTTTTACCCTTAGAGGTGATCAGTTATAGTGGTAGTAGTGGACCTTGTAGTAGCTACGGGTCTCCCACGTCATCGCAACCTGCCCTAATACAGCGGAGCATGAGTAGCCAATCACTCCAAAAGGATAGGGTAAGGCATGGACCGGGTGCTAGGATTTCCTCGTTGATCGACACGGATATGCCGGCCGTGAGAAGGGTTTACAGCTCCGGTGATTTGCAGGGAAGAACAGAAAGAGGATGCTCAAGTGAAAGCAGTTTGATAATAGAAGGAATGACCAAAGCTTGTAGATATAGTCCTGAAGAGAAGAAAGAGAGAATTGAAAGATATAAATCCAAAAGAAATCAAAGGAATTTTAATAAGAAGATTAAGTATGAGTGTAGAAAAACATTGGCGGATAGTAGAAGACGAATAAGAGGAAGATTCGCAAGAAACGAAGAAATTGAAAACAGTAACTCCACCAGCTCTCCATTAGAGGCATGGAGCTGTTATGATAATCCCATGGTGAAGGAATTAGACACCACCCAAGATGATGGCTCATGGATCACCTTCCTTGATTCTTACCATTGTTAA

Protein sequence

MHSFSPAVDTSIFHLHSPDLIVSSSPPLFPSFPNFSSSHSSSFLLAYSQLALDPVLESPDLLPLEVISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVRHGPGARISSLIDTDMPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEEIENSNSTSSPLEAWSCYDNPMVKELDTTQDDGSWITFLDSYHC*
BLAST of MELO3C020684 vs. Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.4e-07
Identity = 47/167 (28.14%), Postives = 71/167 (42.51%), Query Frame = 1

Query: 40  SSSFLLAYSQLALDPVLESPDLLPLEVISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSL 99
           ++S+LLA   + +  +    D   +EV S   SSG   + G         +     +  L
Sbjct: 121 TASWLLAKEGIEITNLFSDLDYPKIEVTSEENSSG---NDGVVPVQNKLFLNEDYFNFDL 180

Query: 100 QKDRVRHGPGARISSLIDTDMPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSP 159
              ++       I+  + T    V  V  SG   G T    ++E        T A + SP
Sbjct: 181 SASKISQQGFNFINQTVSTRTIDVPLVPESG---GVTAEMTNTE--------TPAVQLSP 240

Query: 160 EEKKERIERYKSKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEE 207
            E++ R+ RY+ KR  R F K I+Y  RK  A+ R RI+GRFA+  +
Sbjct: 241 AEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 273

BLAST of MELO3C020684 vs. Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06
Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 1

Query: 158 SPEEKKERIERYKSKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEEIENSN 212
           S  +++ R+ RY+ KR  R F K I+Y  RK  A+SR RI+GRFA+  E EN +
Sbjct: 281 SSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDD 334

BLAST of MELO3C020684 vs. Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 2.2e-06
Identity = 25/62 (40.32%), Postives = 34/62 (54.84%), Query Frame = 1

Query: 150 GMTKACRYSPEEKKERIERYKSKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEEIEN 209
           G  +A   +  E++ R+ RY+ KR  R F K I+Y  RK  A+ R RI+GRFA+  +   
Sbjct: 283 GTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNE 342

Query: 210 SN 212
           SN
Sbjct: 343 SN 344

BLAST of MELO3C020684 vs. Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.9e-06
Identity = 24/61 (39.34%), Postives = 37/61 (60.66%), Query Frame = 1

Query: 158 SPEEKKERIERYKSKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEEI-ENSNSTSSP 217
           SP +++ R+ RY+ K+  R F K I+Y  RK  A+ R RI+GRFA+ +++ E +N   S 
Sbjct: 282 SPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFST 341

BLAST of MELO3C020684 vs. Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.0e-06
Identity = 26/71 (36.62%), Postives = 36/71 (50.70%), Query Frame = 1

Query: 135 RTERGCSSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRNFNKKIKYECRKTLADSR 194
           RT +G   +       M    + SP +++ R+ RY+ KR  R F K I+Y  RK  A+ R
Sbjct: 279 RTPKGTVEQQPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIR 338

Query: 195 RRIRGRFARNE 206
            R+ GRFA+ E
Sbjct: 339 PRVNGRFAKRE 349

BLAST of MELO3C020684 vs. TrEMBL
Match: A0A0A0LUR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G497300 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 1.9e-129
Identity = 235/248 (94.76%), Postives = 242/248 (97.58%), Query Frame = 1

Query: 1   MHSFSPAVDTSIFHLHSPDLIVSSSPPLFPSFPNFSSSHSSSFLLAYSQLALDPVLESPD 60
           MHSFSPAVDTSIFHLHSPDLIV  SPPLFPSFPNFSSSHSSSFLLAYSQLAL+PVLESP+
Sbjct: 1   MHSFSPAVDTSIFHLHSPDLIV--SPPLFPSFPNFSSSHSSSFLLAYSQLALNPVLESPE 60

Query: 61  LLPLEVISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVRHGPGARISSLIDTDM 120
           LLP EVISYSGSSGPCSSYGSPTSSQP+LIQRSMSSQSLQKDRVRHGPGARISSLIDTDM
Sbjct: 61  LLPSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTDM 120

Query: 121 PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRNFNK 180
           PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEK+ERIERYK+KRNQRNFNK
Sbjct: 121 PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYKTKRNQRNFNK 180

Query: 181 KIKYECRKTLADSRRRIRGRFARNEEIENSNSTSSPLEAWSCYDNPMVKELDTTQDDGSW 240
           KIKYECRKTLADSRRRIRGRFARNEEIEN NSTSSPLEAWSCY+NPMV+E DT QDDGSW
Sbjct: 181 KIKYECRKTLADSRRRIRGRFARNEEIENGNSTSSPLEAWSCYENPMVEE-DTVQDDGSW 240

Query: 241 ITFLDSYH 249
           ITFLDSYH
Sbjct: 241 ITFLDSYH 245

BLAST of MELO3C020684 vs. TrEMBL
Match: W9REL7_9ROSA (Zinc finger protein CONSTANS-LIKE 1 OS=Morus notabilis GN=L484_007188 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.3e-42
Identity = 121/246 (49.19%), Postives = 150/246 (60.98%), Query Frame = 1

Query: 18  PDLIVSSSPPLFPSFPNFSSSHSSSFLLAY--SQLALDPVLESPDLLPLEVISYSGSSGP 77
           P  ++ + PPL          H   FL  +   QLA+   ++S  LL  E    +GSS  
Sbjct: 24  PVPVLQAPPPLM------FQPHDLPFLQPHHHEQLAVAVEVDSLALLSSE----AGSSSA 83

Query: 78  CSSYGSPTS------SQPALIQRSMSSQSLQKDRVRHGPGARISSLIDT-DMPAVRRVYS 137
           CSSY SP+S         +LIQRS+SS SLQK+   H   + +S L+D+ +   VRRVYS
Sbjct: 84  CSSYSSPSSVGWSADQGTSLIQRSVSSHSLQKNGA-HRVLSSVSELLDSAETSPVRRVYS 143

Query: 138 SGDLQG--------RTERGCSSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRNFNK 197
           +GDLQ         R+E   SSESS IIEGM++ACRYS EEK+ERIERY+SKRNQRNFNK
Sbjct: 144 TGDLQRINMVQHSYRSESPLSSESSAIIEGMSRACRYSQEEKRERIERYRSKRNQRNFNK 203

Query: 198 KIKYECRKTLADSRRRIRGRFARNEEIENSNSTSSPLEAWSCYDNPMVKELDTTQDDGSW 247
           KIKY CRKTLADSR RIRGRFARNEEI+  +S +     WS  +     E     DD +W
Sbjct: 204 KIKYACRKTLADSRPRIRGRFARNEEIDQKSSQAQ----WSHINGGEEDE----DDDENW 250

BLAST of MELO3C020684 vs. TrEMBL
Match: B9N6M0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s24010g PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.5e-41
Identity = 116/227 (51.10%), Postives = 139/227 (61.23%), Query Frame = 1

Query: 34  NFSSSHSSSFL----LAYSQLAL-DPVLESPDLLPLEVISYSGS------SGPCSSYGSP 93
           N S S+SS  +    LA  QL + DPV  +     +E+ S  GS      +  CSSYGSP
Sbjct: 11  NSSLSNSSGVINTRPLAADQLVIPDPVAAAAAAAGIELGSTVGSHCTSSTASGCSSYGSP 70

Query: 94  TSSQPALIQRSMSSQSLQKDRVRHGPGARISSLIDTDMPAVRRVYSSGDLQG--RTERGC 153
           +S       RS+SS S QK+       +     +D D   VRRV+S+GDLQ   R E   
Sbjct: 71  SSL------RSISSHSFQKNGYHCHFASHPHDFLDMDTSPVRRVFSTGDLQHGHRAESPL 130

Query: 154 SSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRNFNKKIKYECRKTLADSRRRIRGR 213
            SESSLIIE M+KAC+YSPEEKKERIERY+SKRNQRNFNKKIKYECRK LADSR RIRGR
Sbjct: 131 LSESSLIIESMSKACKYSPEEKKERIERYRSKRNQRNFNKKIKYECRKILADSRPRIRGR 190

Query: 214 FARNEEIENSNSTSSPLEAWSCYDNPMVKELDTTQDDGSWITFLDSY 248
           FARN+EIE      +P   WS      V   +  +DD +WI FLDS+
Sbjct: 191 FARNDEIE-----KNPQLQWS-----NVSGEEDEEDDDNWIDFLDSF 221

BLAST of MELO3C020684 vs. TrEMBL
Match: A0A067GCA8_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g042936mg PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 6.2e-40
Identity = 101/190 (53.16%), Postives = 124/190 (65.26%), Query Frame = 1

Query: 67  ISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVRHGPGARISSLIDTDMPAVRRV 126
           +++S S+  CSSYGSP S QP L+QRS SSQSLQ +     P    +  +D D   VRRV
Sbjct: 45  MAHSSSTSGCSSYGSP-SQQPTLMQRSTSSQSLQNNS-GVPPFMSANEFLDMDTSPVRRV 104

Query: 127 YSSGDLQGRTERG----------CSSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQR 186
           +S+GDL G   RG           +SESS+IIEGM +AC YSPEEKKERIERY+SKR QR
Sbjct: 105 FSTGDLHG-INRGHYGQRLSGSPLASESSMIIEGMNRACPYSPEEKKERIERYRSKRTQR 164

Query: 187 NFNKKIKYECRKTLADSRRRIRGRFARNEEIENSNSTSSPLEAWSCYDNPMVKELDTTQD 246
           NFNK+IKY CRKTLADSR RIRGRFARNEEIE ++        W+         +   +D
Sbjct: 165 NFNKRIKYACRKTLADSRPRIRGRFARNEEIEKNSEVQ-----WN--------RVAGEED 218

BLAST of MELO3C020684 vs. TrEMBL
Match: V4SBQ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029153mg PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.4e-39
Identity = 99/189 (52.38%), Postives = 123/189 (65.08%), Query Frame = 1

Query: 67  ISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVRHGPGARISSLIDTDMPAVRRV 126
           +++S S+  CSSYGSP S QP L+QRS SSQSLQ +     P    +  +D D   VRRV
Sbjct: 67  MAHSSSTSGCSSYGSP-SQQPTLMQRSTSSQSLQNNS-GVPPFMSANEFLDMDTSPVRRV 126

Query: 127 YSSGDLQG---------RTERGCSSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRN 186
           +S+GDL G          +    +SESS+IIEGM +AC YSPEEKKERIERY+SKR QRN
Sbjct: 127 FSTGDLHGINMGHYGQRLSGSPLASESSMIIEGMNRACPYSPEEKKERIERYRSKRTQRN 186

Query: 187 FNKKIKYECRKTLADSRRRIRGRFARNEEIENSNSTSSPLEAWSCYDNPMVKELDTTQDD 246
           FNK+IKY CRKTLADSR RIRGRFARNEEIE ++        W+         +   +D+
Sbjct: 187 FNKRIKYACRKTLADSRPRIRGRFARNEEIEKNSEVQ-----WN--------RVAGEEDE 240

BLAST of MELO3C020684 vs. TAIR10
Match: AT5G59990.1 (AT5G59990.1 CCT motif family protein)

HSP 1 Score: 134.4 bits (337), Expect = 9.5e-32
Identity = 87/181 (48.07%), Postives = 107/181 (59.12%), Query Frame = 1

Query: 71  GSSGPCSSYGSPTSSQPALI-QRSMSSQSLQKDRVRHGPGARISSLIDTDMPAVRRVYSS 130
           G S  C S  S  S   +L+ QRS+SS +        G        ++ D   VRR  S+
Sbjct: 73  GGSSSCDSPSSMGSGGESLVMQRSVSSHNGFS-----GNYTAAHDFVNDDDGPVRRALSA 132

Query: 131 GDLQGRTERGCS---SESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRNFNKKIKYEC 190
           GDL   + R  S   SES+ IIEGM+KA +YSPEEKKE+IE+Y+SKRN RNFNK+IKYEC
Sbjct: 133 GDLPRSSRRESSTVWSESNAIIEGMSKAYKYSPEEKKEKIEKYRSKRNLRNFNKRIKYEC 192

Query: 191 RKTLADSRRRIRGRFARNEEIENSNSTSSPLEAWSCYDNPMVKELDTTQDDGSWITFLDS 248
           RKTLADSR RIRGRFARN+EI         +EA       +V ++DT      W +FLDS
Sbjct: 193 RKTLADSRPRIRGRFARNDEISQQEQV-DVMEA-------VVGDVDT------WASFLDS 234

BLAST of MELO3C020684 vs. TAIR10
Match: AT5G41380.1 (AT5G41380.1 CCT motif family protein)

HSP 1 Score: 108.6 bits (270), Expect = 5.6e-24
Identity = 85/234 (36.32%), Postives = 119/234 (50.85%), Query Frame = 1

Query: 4   FSPAVDTSIFHLHSPDLIVSSSPPLFPSFPNFSSSHSSSFLLA-YSQLALDPVLESPDLL 63
           +S     +IF   +P  I+SSSPP         S H  + L   +S   +   +++    
Sbjct: 46  YSVEESLNIFDHFTPQHILSSSPPSDLLGTLSLSQHIPTGLYPNFSDFQISDAVKTEKFF 105

Query: 64  PLEVISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVR---HGPGARISSLIDTD 123
                 ++ ++    SY S   +    +QRS SS S++  + +   + P    S+L   +
Sbjct: 106 D----GHNQAATMARSY-STIENSGRYMQRSFSSNSVEGKQTQVPFNIPMMDSSNLSYNN 165

Query: 124 MPA---------VRRVYSSGDLQGRTERGCSSESSLII---EGMTKACRYSPEEKKERIE 183
           + +         +RRVYS+GDLQ   E   SSE+S +    E   K  RYS EE+KE+I 
Sbjct: 166 LSSPENAFFSSQMRRVYSTGDLQNNMEMQRSSENSTMPFSEEQNFKVGRYSAEERKEKIS 225

Query: 184 RYKSKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEE-IENSNSTSSPLEAW 221
           +Y++KRNQRNF K IKY CRKTLADSR RIRGRFARN+E +E  N      E W
Sbjct: 226 KYRAKRNQRNFTKTIKYACRKTLADSRPRIRGRFARNDEVVEIPNIEDDDSELW 274

BLAST of MELO3C020684 vs. TAIR10
Match: AT1G63820.1 (AT1G63820.1 CCT motif family protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-20
Identity = 59/140 (42.14%), Postives = 76/140 (54.29%), Query Frame = 1

Query: 123 VRRVYSSGDLQ--GRTERGCSSESSLII------------EGMTKACRYSPEEKKERIER 182
           +RRVYS+GDLQ  GR   G  S SS +             E   +  RYS EE+KE+I +
Sbjct: 139 MRRVYSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLRVGRYSSEERKEKISK 198

Query: 183 YKSKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEEIENSNSTSSPLEAWSCYDNPMV 242
           Y++KR QRNF K IKY CRKTLAD+R R+RGRFARN+E+               ++NP +
Sbjct: 199 YRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARNDEV---------------FENPKI 258

Query: 243 KELDTTQDDGSWITFLDSYH 249
               T Q++   +  LD  H
Sbjct: 259 ASSFTRQENDDDLWNLDGLH 263

BLAST of MELO3C020684 vs. TAIR10
Match: AT2G33350.1 (AT2G33350.1 CCT motif family protein)

HSP 1 Score: 91.7 bits (226), Expect = 7.1e-19
Identity = 79/241 (32.78%), Postives = 108/241 (44.81%), Query Frame = 1

Query: 6   PAVDTSIFHLHSPDLIVSSSPPLFPSFPNFSSSHSSSFLLAYSQLALDPVLES---PDLL 65
           P +D  +  +       SS   +    PN S S     L A S LA  P+       D L
Sbjct: 123 PVIDHLLTAISQDQFDFSSGLQVIHQPPNISYSGDPLSLSAISSLAPPPLQSGVFEEDCL 182

Query: 66  PLEVISYS-GSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVRHG--PGARISSLIDTD 125
              V SY+ G +  CS + S  S  PA +   + S       +      G+ I+   D  
Sbjct: 183 S-SVPSYNLGLNPSCSFFRS--SGLPAYMSTGLLSAESNLGYLPGNIHVGSEINKPHDPL 242

Query: 126 MP------------AVRRVYSSGDLQGRTERGCSSESSLI------------IEGM---- 185
           M             +++R+++  DLQ     G  ++S L+            I G+    
Sbjct: 243 MDFQADNGGFFCPDSIKRMFNPEDLQKALGGGAENQSHLVTPQAHPALGPVDINGLEDST 302

Query: 186 -TKACRYSPEEKKERIERYKSKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEEIENS 212
             K  + SPE++KE+I RY  KRN+RNFNKKIKY CRKTLADSR R+RGRFA+N+E    
Sbjct: 303 LNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDEFGEP 360

BLAST of MELO3C020684 vs. TAIR10
Match: AT3G12890.1 (AT3G12890.1 activator of spomin::LUC2)

HSP 1 Score: 85.9 bits (211), Expect = 3.9e-17
Identity = 42/66 (63.64%), Postives = 47/66 (71.21%), Query Frame = 1

Query: 141 SSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRNFNKKIKYECRKTLADSRRRIRGR 200
           +SE  +  E  TK  RYS EE+K+RI RY  K+NQRNFNK IKY CRKTLAD R R+RGR
Sbjct: 118 NSEGGIQAEPNTKVGRYSVEERKDRIMRYLKKKNQRNFNKTIKYVCRKTLADRRVRVRGR 177

Query: 201 FARNEE 207
           FARN +
Sbjct: 178 FARNND 183

BLAST of MELO3C020684 vs. NCBI nr
Match: gi|659115360|ref|XP_008457517.1| (PREDICTED: uncharacterized protein LOC103497191 [Cucumis melo])

HSP 1 Score: 503.4 bits (1295), Expect = 2.2e-139
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1

Query: 1   MHSFSPAVDTSIFHLHSPDLIVSSSPPLFPSFPNFSSSHSSSFLLAYSQLALDPVLESPD 60
           MHSFSPAVDTSIFHLHSPDLIVSSSPPLFPSFPNFSSSHSSSFLLAYSQLALDPVLESPD
Sbjct: 1   MHSFSPAVDTSIFHLHSPDLIVSSSPPLFPSFPNFSSSHSSSFLLAYSQLALDPVLESPD 60

Query: 61  LLPLEVISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVRHGPGARISSLIDTDM 120
           LLPLEVISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVRHGPGARISSLIDTDM
Sbjct: 61  LLPLEVISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVRHGPGARISSLIDTDM 120

Query: 121 PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRNFNK 180
           PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRNFNK
Sbjct: 121 PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRNFNK 180

Query: 181 KIKYECRKTLADSRRRIRGRFARNEEIENSNSTSSPLEAWSCYDNPMVKELDTTQDDGSW 240
           KIKYECRKTLADSRRRIRGRFARNEEIENSNSTSSPLEAWSCYDNPMVKELDTTQDDGSW
Sbjct: 181 KIKYECRKTLADSRRRIRGRFARNEEIENSNSTSSPLEAWSCYDNPMVKELDTTQDDGSW 240

Query: 241 ITFLDSYHC 250
           ITFLDSYHC
Sbjct: 241 ITFLDSYHC 249

BLAST of MELO3C020684 vs. NCBI nr
Match: gi|778661376|ref|XP_011657991.1| (PREDICTED: two-component response regulator-like APRR9 [Cucumis sativus])

HSP 1 Score: 469.9 bits (1208), Expect = 2.7e-129
Identity = 235/248 (94.76%), Postives = 242/248 (97.58%), Query Frame = 1

Query: 1   MHSFSPAVDTSIFHLHSPDLIVSSSPPLFPSFPNFSSSHSSSFLLAYSQLALDPVLESPD 60
           MHSFSPAVDTSIFHLHSPDLIV  SPPLFPSFPNFSSSHSSSFLLAYSQLAL+PVLESP+
Sbjct: 1   MHSFSPAVDTSIFHLHSPDLIV--SPPLFPSFPNFSSSHSSSFLLAYSQLALNPVLESPE 60

Query: 61  LLPLEVISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVRHGPGARISSLIDTDM 120
           LLP EVISYSGSSGPCSSYGSPTSSQP+LIQRSMSSQSLQKDRVRHGPGARISSLIDTDM
Sbjct: 61  LLPSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTDM 120

Query: 121 PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRNFNK 180
           PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEK+ERIERYK+KRNQRNFNK
Sbjct: 121 PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYKTKRNQRNFNK 180

Query: 181 KIKYECRKTLADSRRRIRGRFARNEEIENSNSTSSPLEAWSCYDNPMVKELDTTQDDGSW 240
           KIKYECRKTLADSRRRIRGRFARNEEIEN NSTSSPLEAWSCY+NPMV+E DT QDDGSW
Sbjct: 181 KIKYECRKTLADSRRRIRGRFARNEEIENGNSTSSPLEAWSCYENPMVEE-DTVQDDGSW 240

Query: 241 ITFLDSYH 249
           ITFLDSYH
Sbjct: 241 ITFLDSYH 245

BLAST of MELO3C020684 vs. NCBI nr
Match: gi|1009177769|ref|XP_015870156.1| (PREDICTED: two-component response regulator-like APRR9 [Ziziphus jujuba])

HSP 1 Score: 189.5 bits (480), Expect = 7.1e-45
Identity = 127/248 (51.21%), Postives = 150/248 (60.48%), Query Frame = 1

Query: 10  TSIFHLHSPDLIVSSSPPLFPSFPNFSSSHSSSFLLAYSQLALDPVLESPDLLPLEVISY 69
           +S F   S  L  S  PP  P  P   SSH       +S    D + E+  LL  EV S 
Sbjct: 6   SSPFPRASDSLADSPFPPPPPPPP---SSHPPFLPDHFSGTDFDSLHETLRLLGSEV-SN 65

Query: 70  SGSSGPCSSYGSPTS---SQPALIQRSMSSQSLQKDRVRHGPGARISSLIDTDMPAVRRV 129
           S SSG CSSYGSP S    +P LIQRS+SS SLQK+       +    L  ++   VRRV
Sbjct: 66  SCSSG-CSSYGSPCSLGAHKPTLIQRSVSSHSLQKNGTHRVLSSVAELLESSETGPVRRV 125

Query: 130 YSSGDLQG--------RTERGCSSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRNF 189
           YS+GDLQG        R+E   S+ESS+IIEGMTKACRYSPEEKKERIERY+SKRNQRNF
Sbjct: 126 YSTGDLQGNNMVQHSYRSESPLSNESSMIIEGMTKACRYSPEEKKERIERYRSKRNQRNF 185

Query: 190 NKKIKYECRKTLADSRRRIRGRFARNEEIENSNSTSSPLEAWSCYDNPMVKELDTTQDDG 247
           NKKIKY CRKTLADSR RIRGRFARN+EIE ++        WS          +  +D+ 
Sbjct: 186 NKKIKYACRKTLADSRPRIRGRFARNDEIEKNSQVQ-----WSHMGGE-----EDEEDED 238

BLAST of MELO3C020684 vs. NCBI nr
Match: gi|703086450|ref|XP_010093007.1| (Zinc finger protein CONSTANS-LIKE 1 [Morus notabilis])

HSP 1 Score: 180.6 bits (457), Expect = 3.3e-42
Identity = 121/246 (49.19%), Postives = 150/246 (60.98%), Query Frame = 1

Query: 18  PDLIVSSSPPLFPSFPNFSSSHSSSFLLAY--SQLALDPVLESPDLLPLEVISYSGSSGP 77
           P  ++ + PPL          H   FL  +   QLA+   ++S  LL  E    +GSS  
Sbjct: 24  PVPVLQAPPPLM------FQPHDLPFLQPHHHEQLAVAVEVDSLALLSSE----AGSSSA 83

Query: 78  CSSYGSPTS------SQPALIQRSMSSQSLQKDRVRHGPGARISSLIDT-DMPAVRRVYS 137
           CSSY SP+S         +LIQRS+SS SLQK+   H   + +S L+D+ +   VRRVYS
Sbjct: 84  CSSYSSPSSVGWSADQGTSLIQRSVSSHSLQKNGA-HRVLSSVSELLDSAETSPVRRVYS 143

Query: 138 SGDLQG--------RTERGCSSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRNFNK 197
           +GDLQ         R+E   SSESS IIEGM++ACRYS EEK+ERIERY+SKRNQRNFNK
Sbjct: 144 TGDLQRINMVQHSYRSESPLSSESSAIIEGMSRACRYSQEEKRERIERYRSKRNQRNFNK 203

Query: 198 KIKYECRKTLADSRRRIRGRFARNEEIENSNSTSSPLEAWSCYDNPMVKELDTTQDDGSW 247
           KIKY CRKTLADSR RIRGRFARNEEI+  +S +     WS  +     E     DD +W
Sbjct: 204 KIKYACRKTLADSRPRIRGRFARNEEIDQKSSQAQ----WSHINGGEEDE----DDDENW 250

BLAST of MELO3C020684 vs. NCBI nr
Match: gi|566150678|ref|XP_006369499.1| (hypothetical protein POPTR_0001s24010g [Populus trichocarpa])

HSP 1 Score: 177.9 bits (450), Expect = 2.1e-41
Identity = 116/227 (51.10%), Postives = 139/227 (61.23%), Query Frame = 1

Query: 34  NFSSSHSSSFL----LAYSQLAL-DPVLESPDLLPLEVISYSGS------SGPCSSYGSP 93
           N S S+SS  +    LA  QL + DPV  +     +E+ S  GS      +  CSSYGSP
Sbjct: 11  NSSLSNSSGVINTRPLAADQLVIPDPVAAAAAAAGIELGSTVGSHCTSSTASGCSSYGSP 70

Query: 94  TSSQPALIQRSMSSQSLQKDRVRHGPGARISSLIDTDMPAVRRVYSSGDLQG--RTERGC 153
           +S       RS+SS S QK+       +     +D D   VRRV+S+GDLQ   R E   
Sbjct: 71  SSL------RSISSHSFQKNGYHCHFASHPHDFLDMDTSPVRRVFSTGDLQHGHRAESPL 130

Query: 154 SSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRNFNKKIKYECRKTLADSRRRIRGR 213
            SESSLIIE M+KAC+YSPEEKKERIERY+SKRNQRNFNKKIKYECRK LADSR RIRGR
Sbjct: 131 LSESSLIIESMSKACKYSPEEKKERIERYRSKRNQRNFNKKIKYECRKILADSRPRIRGR 190

Query: 214 FARNEEIENSNSTSSPLEAWSCYDNPMVKELDTTQDDGSWITFLDSY 248
           FARN+EIE      +P   WS      V   +  +DD +WI FLDS+
Sbjct: 191 FARNDEIE-----KNPQLQWS-----NVSGEEDEEDDDNWIDFLDSF 221

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
COL3_ARATH3.4e-0728.14Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1[more]
COL5_ARATH1.3e-0646.30Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2[more]
COL4_ARATH2.2e-0640.32Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2[more]
COL1_ARATH2.9e-0639.34Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1[more]
CONS_ARATH5.0e-0636.62Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LUR6_CUCSA1.9e-12994.76Uncharacterized protein OS=Cucumis sativus GN=Csa_1G497300 PE=4 SV=1[more]
W9REL7_9ROSA2.3e-4249.19Zinc finger protein CONSTANS-LIKE 1 OS=Morus notabilis GN=L484_007188 PE=4 SV=1[more]
B9N6M0_POPTR1.5e-4151.10Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s24010g PE=4 SV=1[more]
A0A067GCA8_CITSI6.2e-4053.16Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g042936mg PE=4 S... [more]
V4SBQ4_9ROSI1.4e-3952.38Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029153mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G59990.19.5e-3248.07 CCT motif family protein[more]
AT5G41380.15.6e-2436.32 CCT motif family protein[more]
AT1G63820.11.7e-2042.14 CCT motif family protein[more]
AT2G33350.17.1e-1932.78 CCT motif family protein[more]
AT3G12890.13.9e-1763.64 activator of spomin::LUC2[more]
Match NameE-valueIdentityDescription
gi|659115360|ref|XP_008457517.1|2.2e-139100.00PREDICTED: uncharacterized protein LOC103497191 [Cucumis melo][more]
gi|778661376|ref|XP_011657991.1|2.7e-12994.76PREDICTED: two-component response regulator-like APRR9 [Cucumis sativus][more]
gi|1009177769|ref|XP_015870156.1|7.1e-4551.21PREDICTED: two-component response regulator-like APRR9 [Ziziphus jujuba][more]
gi|703086450|ref|XP_010093007.1|3.3e-4249.19Zinc finger protein CONSTANS-LIKE 1 [Morus notabilis][more]
gi|566150678|ref|XP_006369499.1|2.1e-4151.10hypothetical protein POPTR_0001s24010g [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0090501 RNA phosphodiester bond hydrolysis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU65019melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020684T1MELO3C020684T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU65019MU65019transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010402CCT domainPFAMPF06203CCTcoord: 163..204
score: 3.2
IPR010402CCT domainPROFILEPS51017CCTcoord: 162..204
score: 14
NoneNo IPR availablePANTHERPTHR31319FAMILY NOT NAMEDcoord: 70..247
score: 2.0
NoneNo IPR availablePANTHERPTHR31319:SF1CCT MOTIF FAMILY PROTEINcoord: 70..247
score: 2.0

The following gene(s) are paralogous to this gene:

None