MELO3C025709 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025709
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Zinc finger protein CONSTANS-LIKE 3
Location	chr11 : 25248068 .. 25250215 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTTTCCCCATTTCTCTCCGCCGCTTCACATTCCTCCGCCGACATCGCAGGCGTTGATTTTGATCACTGGTTGCCCGATTCTTCCATTAAGCTTTGGAATTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGCCTTCTCCTCCGGAACCCCTAAAAATCCATCCATCAACTAACAACTTTTTATTACATCAATCTTTTCCCCTCCTTAATCATGATTCTCTTCAATCCAATAATGATTCATTTCTTCAACGCACTTTTTCTTCCTCGTTGTCGCCACCGCCTTCTGCCGCCATCGATCCTCCTATCAACCGGCCGCTCTTCCCCGCCGGCGATTTTCAGGTGAGGGGAATAAAATTAACTAATGCGACTAAAAAAGATATTTGGTGAGACCAACATAATCTCTTTTAGAAAAAAATAAAAATTTATGGATTCAACATATGTATTCAAAGATTTGGGAAAAAAACGTCATAATGTGATGATCATAGGTTTTGGTTGGATATTAGATTCAGGTCCAATGCACTCTGCAAAGGTTGATCATAGGTTTTGGTTGGATATTAGATTCAGGTCCAATGACATTCAATAATATTGTAATTAAAGACAAAAAGTCTATCAGTAACTATACAGATTTTTGTTAATTTTATTCTATCCTTTTAATTTTTATTATATGATTGATTAAAATAAAATAAAAAAAGATTGTGATTTTATTTGAATTTCTGGAAAAATTTATGCCATCAATGAAAGCTAATACAATCATGGTCAACTTAATTTCATGCAAAGGATCATTAGAAAAATGGCCTTTCATGAATCCAAAGAGTTTGTTTTATTATTATTTTTTAAAAAGGGGTCTTGAGTATAATTTTTAAATGACGAATGAGATCAAAAGTAACATATACCATACTATTATTAAAGACAGATGACTAATAAAAATATTCTAATAGTATAGTTTGTGGCCTTGACAAACATTGATCGAATAAGAACATATTAAGTTGTATAAAGATAAGTGAAGTGTGTAACTATTTTTGAATGTTTGAAATTGGGTTTTGAATAATTATATTGAAATAATTAATGAGATTGAAAAAATGGCGCAGCAGAAGAAGAATAATAATGAAAGAGGAGATGAGAGTCCAGTTTCATGCGAAAGTAGCATCACCATTATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCTGAAGAGAAGAAGGAAAGAATTGAAAGATATAGAACCAAAAGAAACCAAAGGAACTTCAACAAGAAGATTAAGGTTTCTTTTTTCTCATATTATATTATTCTTTATCTATCTTAATTATTATATAAATGGATTAATTCTTATACAAAGAATAAACAATAATTTCACCTCTTATATATTCTACTATCTACATATTATTTCATAGATTCTAGATGCCAACAACTATGTATATCAACTAATATGATTATAATATTTCAATTTCATCTTGATCTTTTTGATTTTGTCACATCTAACTTATATGAGAAACTCCGAAATACCCTTTTTTTATCAATCCTCTCTCTCTCTCTTTCATTTTAAAGGTTTGAAAGGCCATTTCATCATTTAGAAGAGGGTAACAATGGAAAAGACAGATTTTTTAAAACCATCCCAAAAATGGGTCCAAAAGCCAATTAAACAACATATTTCATTCAATCAAAATCCTAGATGTGGTTTTTTATGCCTTTTTTTTCTATAAATACAATAAATTCAATTCACAAGTAAATGAATCTCTTTTTGTATGTTACACTCGCTAATATTATTTGGTTGTTGGTTAAAGTATGCTTGTAGGAAGTCATTGGCAGATAGTCGACCACGGATTAGAGGACGATTTGCGAGGTACAACGACGAGGTAGTGAAGAATTATCCAGTGCAATGGAATCTCCAACGAGAGGAAGAACAACAACAACGAGAAGCAAATAGTTGCGGAGATAATTGGATCAAGTATTTCATTGATACATATTCCGCGAACCTTATTCCATGAATCTCACACAACAACTAAACTAATAATGTAGTTGTAGTCTAGTGTCATTCGGCTTCTTCCATTTTGACCTACCTTTCAATTACGTGAGAAATTTATATCTATTTGCTTTAGCTAATTTTTCTCTTATATATATATATAATTATAGTGATGTCA

mRNA sequence

ATGGCCTTTTCCCCATTTCTCTCCGCCGCTTCACATTCCTCCGCCGACATCGCAGGCGTTGATTTTGATCACTGGTTGCCCGATTCTTCCATTAAGCTTTGGAATTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGCCTTCTCCTCCGGAACCCCTAAAAATCCATCCATCAACTAACAACTTTTTATTACATCAATCTTTTCCCCTCCTTAATCATGATTCTCTTCAATCCAATAATGATTCATTTCTTCAACGCACTTTTTCTTCCTCGTTGTCGCCACCGCCTTCTGCCGCCATCGATCCTCCTATCAACCGGCCGCTCTTCCCCGCCGGCGATTTTCAGCAGAAGAAGAATAATAATGAAAGAGGAGATGAGAGTCCAGTTTCATGCGAAAGTAGCATCACCATTATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCTGAAGAGAAGAAGGAAAGAATTGAAAGATATAGAACCAAAAGAAACCAAAGGAACTTCAACAAGAAGATTAAGTATGCTTGTAGGAAGTCATTGGCAGATAGTCGACCACGGATTAGAGGACGATTTGCGAGGTACAACGACGAGGTAGTGAAGAATTATCCAGTGCAATGGAATCTCCAACGAGAGGAAGAACAACAACAACGAGAAGCAAATAGTTGCGGAGATAATTGGATCAAGTATTTCATTGATACATATTCCGCGAACCTTATTCCATGAATCTCACACAACAACTAAACTAATAATGTAGTTGTAGTCTAGTGTCATTCGGCTTCTTCCATTTTGACCTACCTTTCAATTACGTGAGAAATTTATATCTATTTGCTTTAGCTAATTTTTCTCTTATATATATATATAATTATAGTGATGTCA

Coding sequence (CDS)

ATGGCCTTTTCCCCATTTCTCTCCGCCGCTTCACATTCCTCCGCCGACATCGCAGGCGTTGATTTTGATCACTGGTTGCCCGATTCTTCCATTAAGCTTTGGAATTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGCCTTCTCCTCCGGAACCCCTAAAAATCCATCCATCAACTAACAACTTTTTATTACATCAATCTTTTCCCCTCCTTAATCATGATTCTCTTCAATCCAATAATGATTCATTTCTTCAACGCACTTTTTCTTCCTCGTTGTCGCCACCGCCTTCTGCCGCCATCGATCCTCCTATCAACCGGCCGCTCTTCCCCGCCGGCGATTTTCAGCAGAAGAAGAATAATAATGAAAGAGGAGATGAGAGTCCAGTTTCATGCGAAAGTAGCATCACCATTATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCTGAAGAGAAGAAGGAAAGAATTGAAAGATATAGAACCAAAAGAAACCAAAGGAACTTCAACAAGAAGATTAAGTATGCTTGTAGGAAGTCATTGGCAGATAGTCGACCACGGATTAGAGGACGATTTGCGAGGTACAACGACGAGGTAGTGAAGAATTATCCAGTGCAATGGAATCTCCAACGAGAGGAAGAACAACAACAACGAGAAGCAAATAGTTGCGGAGATAATTGGATCAAGTATTTCATTGATACATATTCCGCGAACCTTATTCCATGA

Protein sequence

MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPSTNNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLIP*

Homology

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BLAST of MELO3C025709 vs. Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-08
Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = 1


Query: 145 ACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 198
           A + SP E++ R+ RYR KR  R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 221 AVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 273

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BLAST of MELO3C025709 vs. Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 3.9e-08
Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 1


Query: 141 GMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 198
           G  RA   +  E++ R+ RYR KR  R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 283 GTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 339

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BLAST of MELO3C025709 vs. Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.1e-08
Identity = 45/152 (29.61%), Postives = 65/152 (42.76%), Query Frame = 1


Query: 53  PLKIHPSTNNFLLHQSFPLL----NHDSLQSNNDSFLQRTFSSSLS---PPPSAAIDPPI 112
           PL+I  S   +   Q+F L     +  +L+S+N S       SS+     P S   D  +
Sbjct: 201 PLQIEVSKGMYQEQQNFQLSINCGSWGALRSSNGSLSHMVNVSSMDLGVVPESTTSDATV 260

Query: 113 NRPLFPAGDFQQKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRN 172
           + P  P                       ++T       A   SP +++ R+ RYR K+ 
Sbjct: 261 SNPRSP----------------------KAVTDQPPYPPAQMLSPRDREARVLRYREKKK 320

Query: 173 QRNFNKKIKYACRKSLADSRPRIRGRFARYND 198
            R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 321 MRKFEKTIRYASRKAYAEKRPRIKGRFAKKKD 330

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BLAST of MELO3C025709 vs. Swiss-Prot
Match: HD1_ORYSJ (Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.7e-08
Identity = 36/104 (34.62%), Postives = 51/104 (49.04%), Query Frame = 1


Query: 96  PPSAAIDPPINRPLFPAGDFQQKKNNNERGDESPVSCESSITIIEGMS--RACRYSPEEK 155
           P S  ID P +R L PAG                     +I +  G S   +  +S  ++
Sbjct: 288 PDSTVIDMPNSRILTPAG---------------------AINLFSGPSLQMSLHFSSMDR 347

Query: 156 KERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 198
           + R+ RYR K+  R F K I+Y  RK+ A++RPRI+GRFA+ +D
Sbjct: 348 EARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRSD 370

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BLAST of MELO3C025709 vs. Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-07
Identity = 38/119 (31.93%), Postives = 54/119 (45.38%), Query Frame = 1


Query: 79  SNNDSFLQRTFSSSLSP---PPSAAIDPPINRPLFPAGDFQQKKNNNERGDESPVSCESS 138
           ++N S     + SS+     P S A     + P  P G  +Q+          P      
Sbjct: 246 NDNGSINHNAYISSMETGVVPESTACVTTASHPRTPKGTVEQQ----------PDPASQM 305

Query: 139 ITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFAR 195
           IT+ +        SP +++ R+ RYR KR  R F K I+YA RK+ A+ RPR+ GRFA+
Sbjct: 306 ITVTQ-------LSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAK 347

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BLAST of MELO3C025709 vs. TrEMBL
Match: A0A0A0KG14_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G301610 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 5.3e-121
Identity = 224/248 (90.32%), Postives = 231/248 (93.15%), Query Frame = 1


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSE-FSDSCGDGSPPSPPEPLKIHPS 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNS+ FSDSCGDGSPPSPPEPLKI PS
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPS 60

Query: 61  TNNFLLHQS-FPLLNHDSLQSNN-DSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQ 120
           TNNFLLH S FPLLN DSLQSN+ DSFLQRTFSSS SPPPSAAIDPPINRPLFP GDFQ+
Sbjct: 61  TNNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSS-SPPPSAAIDPPINRPLFPVGDFQK 120

Query: 121 KKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYAC 180
           K NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKR+QRNFNKKIKYAC
Sbjct: 121 KNNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYAC 180

Query: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNL----QREEEQQQREANSCGDNWIKYFID 240
           RKSLADSRPRIRGRFARYNDEVVKNYPVQWN     + EEE+QQREANSCGDNWIKYFID
Sbjct: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFID 240

Query: 241 TYSANLIP 242
           TYS NLIP
Sbjct: 241 TYSTNLIP 246

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BLAST of MELO3C025709 vs. TrEMBL
Match: A0A061GWL0_THECC (CCT motif family protein OS=Theobroma cacao GN=TCM_041942 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.1e-32
Identity = 91/167 (54.49%), Postives = 111/167 (66.47%), Query Frame = 1


Query: 76  SLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQ--KKNNNERGDESPVSCE 135
           SLQ N    L   F+S+L+    +A  P   R +F  GD  Q      + R  ESP+S E
Sbjct: 88  SLQKNG---LHCHFASTLNEFIDSASGPV--RRVFSTGDLDQGISMGQHSRRSESPLSSE 147

Query: 136 SSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFA 195
           S+  IIEGMSRACRYSPEEKKERIERYR+KRN RNFNKKIKY CRK+LADSRPRIRGRFA
Sbjct: 148 SN-AIIEGMSRACRYSPEEKKERIERYRSKRNLRNFNKKIKYVCRKTLADSRPRIRGRFA 207

Query: 196 RYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 241
           R N+E  KN   +W+    EE+++ E     ++WI  F+D+ S NLI
Sbjct: 208 R-NEEAEKNPQGEWSHMGGEEEEEDE-----ESWIN-FLDSLSTNLI 241

[Close]

BLAST of MELO3C025709 vs. TrEMBL
Match: A0A0B2QG08_GLYSO (Zinc finger protein CONSTANS-LIKE 3 OS=Glycine soja GN=glysoja_044861 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.5e-32
Identity = 94/195 (48.21%), Postives = 121/195 (62.05%), Query Frame = 1


Query: 45  GSPPSPPEPLKIHPSTNNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPP 104
           G  PSP  P  + PS N  L+ +S   ++  S   NN+      FS+  +    + +D P
Sbjct: 51  GGSPSPT-PTSV-PSPN--LMQRS---VSSHSFHCNNNG-THHPFSALFAELLDSDVDAP 110

Query: 105 INRPLFPAGDFQQKKN-NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTK 164
           + R +   GD Q+     +    +SP+S ESS+ IIEGMSRACRYSPEEKK RIERYR+K
Sbjct: 111 VRR-VCSTGDLQKINGMQHNHHSDSPLSSESSM-IIEGMSRACRYSPEEKKVRIERYRSK 170

Query: 165 RNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSC 224
           RNQRNFNKKIKYACRK+LADSRPRIRGRFAR NDE+ KN  +QW+     E++  E    
Sbjct: 171 RNQRNFNKKIKYACRKTLADSRPRIRGRFAR-NDEIDKNTTLQWSQIGAGEEEDEE---- 230

Query: 225 GDNWIKYFIDTYSAN 239
            +NW+       +AN
Sbjct: 231 DENWVTMLDSLVAAN 230

[Close]

BLAST of MELO3C025709 vs. TrEMBL
Match: I1MID6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G219800 PE=4 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 3.5e-32
Identity = 94/195 (48.21%), Postives = 122/195 (62.56%), Query Frame = 1


Query: 45  GSPPSPPEPLKIHPSTNNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPP 104
           G  PSP  P  + PS N  L+ +S  + +H    +NN +     FS+  +    + +D P
Sbjct: 55  GGSPSPT-PTSV-PSPN--LMQRS--VSSHSFYCNNNGT--HHPFSALFAELLDSDVDAP 114

Query: 105 INRPLFPAGDFQQKKN-NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTK 164
           + R +   GD Q+     +    +SP+S ESS+ IIEGMSRACRYSPEEKK RIERYR+K
Sbjct: 115 VRR-VCSTGDLQKINGMQHNHHSDSPLSSESSM-IIEGMSRACRYSPEEKKVRIERYRSK 174

Query: 165 RNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSC 224
           RNQRNFNKKIKYACRK+LADSRPRIRGRFAR NDE+ KN  +QW+     E++  E    
Sbjct: 175 RNQRNFNKKIKYACRKTLADSRPRIRGRFAR-NDEIDKNTTLQWSQIGAGEEEDEE---- 234

Query: 225 GDNWIKYFIDTYSAN 239
            +NW+       +AN
Sbjct: 235 DENWVTMLDSLVAAN 234

[Close]

BLAST of MELO3C025709 vs. TrEMBL
Match: A0A067LHT7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05627 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.0e-31
Identity = 83/136 (61.03%), Postives = 98/136 (72.06%), Query Frame = 1


Query: 107 RPLFPAGDFQQKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQ 166
           R +F  GD Q    +  + D SP+S ESS+ IIE MS+AC+YSPEEKKERIERYR+KR Q
Sbjct: 117 RRVFSTGDLQ----HGHKAD-SPLSSESSV-IIESMSKACKYSPEEKKERIERYRSKRTQ 176

Query: 167 RNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQW-NLQREEEQQQREANSCGD 226
           RNFNKKIKYACRK+LADSRPRIRGRFAR NDE+ KN   QW N+  EE++         D
Sbjct: 177 RNFNKKIKYACRKTLADSRPRIRGRFAR-NDEIEKNPQAQWSNISGEEDEDY------DD 236

Query: 227 NWIKYFIDTYSANLIP 242
           NW   F+D +SAN IP
Sbjct: 237 NW-SDFLDAFSANSIP 238

[Close]

BLAST of MELO3C025709 vs. TAIR10
Match: AT5G59990.1 (AT5G59990.1 CCT motif family protein)

HSP 1 Score: 116.3 bits (290), Expect = 2.6e-26
Identity = 71/137 (51.82%), Postives = 87/137 (63.50%), Query Frame = 1


Query: 102 DPPINRPLFPAGDFQQKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYR 161
           D P+ R L  AGD  +    + R + S V  ES+  IIEGMS+A +YSPEEKKE+IE+YR
Sbjct: 118 DGPVRRAL-SAGDLPR----SSRRESSTVWSESN-AIIEGMSKAYKYSPEEKKEKIEKYR 177

Query: 162 TKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREAN 221
           +KRN RNFNK+IKY CRK+LADSRPRIRGRFAR NDE+          Q+E+        
Sbjct: 178 SKRNLRNFNKRIKYECRKTLADSRPRIRGRFAR-NDEI---------SQQEQVDVMEAVV 237

Query: 222 SCGDNWIKYFIDTYSAN 239
              D W   F+D++SAN
Sbjct: 238 GDVDTWAS-FLDSFSAN 237

[Close]

BLAST of MELO3C025709 vs. TAIR10
Match: AT1G63820.1 (AT1G63820.1 CCT motif family protein)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-21
Identity = 56/113 (49.56%), Postives = 71/113 (62.83%), Query Frame = 1


Query: 107 RPLFPAGDFQQ--KKNNNERGDESPVSCESSITII----EGMSRACRYSPEEKKERIERY 166
           R ++  GD Q   +    +R   SP++ ESS T +    E   R  RYS EE+KE+I +Y
Sbjct: 140 RRVYSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLRVGRYSSEERKEKISKY 199

Query: 167 RTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWNLQREE 214
           R KR QRNF K IKYACRK+LAD+RPR+RGRFAR NDEV +N  +  +  R+E
Sbjct: 200 RAKRTQRNFTKTIKYACRKTLADNRPRVRGRFAR-NDEVFENPKIASSFTRQE 251

[Close]

BLAST of MELO3C025709 vs. TAIR10
Match: AT5G41380.1 (AT5G41380.1 CCT motif family protein)

HSP 1 Score: 97.8 bits (242), Expect = 9.6e-21
Identity = 64/163 (39.26%), Postives = 84/163 (51.53%), Query Frame = 1


Query: 68  SFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKNNNERGDE 127
           + P+++  +L  NN S  +  F SS              R ++  GD Q         + 
Sbjct: 147 NIPMMDSSNLSYNNLSSPENAFFSSQM------------RRVYSTGDLQNNMEMQRSSEN 206

Query: 128 S--PVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSR 187
           S  P S E +  +        RYS EE+KE+I +YR KRNQRNF K IKYACRK+LADSR
Sbjct: 207 STMPFSEEQNFKV-------GRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSR 266

Query: 188 PRIRGRFARYNDEVVKNYPVQ------WNLQREEEQQQREANS 223
           PRIRGRFAR NDEVV+   ++      W L    E+++   +S
Sbjct: 267 PRIRGRFAR-NDEVVEIPNIEDDDSELWKLDGLHEKEEASVSS 289

[Close]

BLAST of MELO3C025709 vs. TAIR10
Match: AT3G12890.1 (AT3G12890.1 activator of spomin::LUC2)

HSP 1 Score: 86.7 bits (213), Expect = 2.2e-17
Identity = 54/143 (37.76%), Postives = 74/143 (51.75%), Query Frame = 1


Query: 104 PINRPLFPAGDFQQKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTK 163
           P  +PLF     +Q   N+E G ++           E  ++  RYS EE+K+RI RY  K
Sbjct: 101 PEIKPLFRPATGEQSWGNSEGGIQA-----------EPNTKVGRYSVEERKDRIMRYLKK 160

Query: 164 RNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSC 223
           +NQRNFNK IKY CRK+LAD R R+RGRFAR ND   +   +  N     E+++   +  
Sbjct: 161 KNQRNFNKTIKYVCRKTLADRRVRVRGRFARNNDTCEEQPHMSKNHNNHSEKEEDMFSGS 220

Query: 224 GDNWIKY-----FIDTYSANLIP 242
            D  I+      ++    +NLIP
Sbjct: 221 DDYLIQMEHDDGWLHEAMSNLIP 232

[Close]

BLAST of MELO3C025709 vs. TAIR10
Match: AT2G33350.1 (AT2G33350.1 CCT motif family protein)

HSP 1 Score: 85.9 bits (211), Expect = 3.8e-17
Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = 1


Query: 142 MSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDE 199
           +++  + SPE++KE+I RY  KRN+RNFNKKIKYACRK+LADSRPR+RGRFA+ NDE
Sbjct: 300 LNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAK-NDE 355

[Close]

BLAST of MELO3C025709 vs. NCBI nr
Match: gi|659127718|ref|XP_008463852.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo])

HSP 1 Score: 503.4 bits (1295), Expect = 2.1e-139
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60
           MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120
           NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180

Query: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 240
           LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 240

Query: 241 P 242
           P
Sbjct: 241 P 241

[Close]

BLAST of MELO3C025709 vs. NCBI nr
Match: gi|659127720|ref|XP_008463853.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X2 [Cucumis melo])

HSP 1 Score: 496.9 bits (1278), Expect = 2.0e-137
Identity = 240/241 (99.59%), Postives = 240/241 (99.59%), Query Frame = 1


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60
           MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120
           NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDF QKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDF-QKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180

Query: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 240
           LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 240

Query: 241 P 242
           P
Sbjct: 241 P 240

[Close]

BLAST of MELO3C025709 vs. NCBI nr
Match: gi|778714464|ref|XP_011657240.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 5-like [Cucumis sativus])

HSP 1 Score: 441.8 bits (1135), Expect = 7.7e-121
Identity = 224/248 (90.32%), Postives = 231/248 (93.15%), Query Frame = 1


Query: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSE-FSDSCGDGSPPSPPEPLKIHPS 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNS+ FSDSCGDGSPPSPPEPLKI PS
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPS 60

Query: 61  TNNFLLHQS-FPLLNHDSLQSNN-DSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQ 120
           TNNFLLH S FPLLN DSLQSN+ DSFLQRTFSSS SPPPSAAIDPPINRPLFP GDFQ+
Sbjct: 61  TNNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSS-SPPPSAAIDPPINRPLFPVGDFQK 120

Query: 121 KKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYAC 180
           K NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKR+QRNFNKKIKYAC
Sbjct: 121 KNNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYAC 180

Query: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNL----QREEEQQQREANSCGDNWIKYFID 240
           RKSLADSRPRIRGRFARYNDEVVKNYPVQWN     + EEE+QQREANSCGDNWIKYFID
Sbjct: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFID 240

Query: 241 TYSANLIP 242
           TYS NLIP
Sbjct: 241 TYSTNLIP 246

[Close]

BLAST of MELO3C025709 vs. NCBI nr
Match: gi|1009177769|ref|XP_015870156.1| (PREDICTED: two-component response regulator-like APRR9 [Ziziphus jujuba])

HSP 1 Score: 165.2 bits (417), Expect = 1.4e-37
Identity = 112/226 (49.56%), Postives = 137/226 (60.62%), Query Frame = 1


Query: 18  AGVDFDHWLPDSSIKLWNSEFSDSCGDG-SPPSPPEPLKIHPSTNNFLLHQSFPLLNHDS 77
           +G DFD      +++L  SE S+SC  G S    P  L  H  T   L+ +S   ++  S
Sbjct: 41  SGTDFDSL--HETLRLLGSEVSNSCSSGCSSYGSPCSLGAHKPT---LIQRS---VSSHS 100

Query: 78  LQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN-NNERGDESPVSCESS 137
           LQ N      R  SS      S+   P   R ++  GD Q      +    ESP+S ESS
Sbjct: 101 LQKNGT---HRVLSSVAELLESSETGPV--RRVYSTGDLQGNNMVQHSYRSESPLSNESS 160

Query: 138 ITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARY 197
           + IIEGM++ACRYSPEEKKERIERYR+KRNQRNFNKKIKYACRK+LADSRPRIRGRFAR 
Sbjct: 161 M-IIEGMTKACRYSPEEKKERIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFAR- 220

Query: 198 NDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLIP 242
           NDE+ KN  VQW+    EE ++ E     DNWI   +D  S+NLIP
Sbjct: 221 NDEIEKNSQVQWSHMGGEEDEEDE-----DNWIN-ILDALSSNLIP 245

[Close]

BLAST of MELO3C025709 vs. NCBI nr
Match: gi|502082049|ref|XP_004487050.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 3-like [Cicer arietinum])

HSP 1 Score: 152.1 bits (383), Expect = 1.2e-33
Identity = 109/240 (45.42%), Postives = 137/240 (57.08%), Query Frame = 1


Query: 4   SPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGD-GSPPSPPEPLKIHPSTNN 63
           +PF+   +HS  D    D  H   D+  +L NSE S      G  PSP        ST  
Sbjct: 19  TPFVMQQNHSIQDFTEFDSFH---DTISQLNNSELSSGYSSYGGSPSP--------STPT 78

Query: 64  FLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQ-KKNN 123
            L+ +S   ++  SLQ+NN +     FS+  +    +  D P+ R +   GD Q+  +  
Sbjct: 79  ILMQRS---ISSHSLQNNNGTH-HHPFSAFFAELLDSE-DTPV-RKVCSTGDLQRMNRMQ 138

Query: 124 NERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSL 183
           +    +SP+S ESS+ IIEGMSR C YSPEEKK RIERYR KRNQRNFNKKIKY CRK+L
Sbjct: 139 HNHHVDSPLSSESSM-IIEGMSRVCPYSPEEKKVRIERYRRKRNQRNFNKKIKYVCRKTL 198

Query: 184 ADSRPRIRGRFARYNDEVVKNYPVQWNL---QREEEQQQREANSCGDNWIKYFIDTYSAN 239
           AD RPRIRGRFAR NDE+ KN  VQW+      EEE ++ E      NWI  F  T +AN
Sbjct: 199 ADRRPRIRGRFAR-NDEIDKNPTVQWSHIGGGGEEEDEEDE------NWISMFDSTVAAN 233

The following BLAST results are available for this feature:

BLAST of MELO3C025709 vs. Swiss-Prot


Match Name	E-value	Identity	Description
COL3_ARATH	1.8e-08	52.83	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1	[more]
COL4_ARATH	3.9e-08	49.12	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2	[more]
COL1_ARATH	5.1e-08	29.61	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1	[more]
HD1_ORYSJ	6.7e-08	34.62	Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2 SV=1	[more]
CONS_ARATH	1.5e-07	31.93	Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1	[more]

BLAST of MELO3C025709 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG14_CUCSA	5.3e-121	90.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G301610 PE=4 SV=1	[more]
A0A061GWL0_THECC	2.1e-32	54.49	CCT motif family protein OS=Theobroma cacao GN=TCM_041942 PE=4 SV=1	[more]
A0A0B2QG08_GLYSO	3.5e-32	48.21	Zinc finger protein CONSTANS-LIKE 3 OS=Glycine soja GN=glysoja_044861 PE=4 SV=1	[more]
I1MID6_SOYBN	3.5e-32	48.21	Uncharacterized protein OS=Glycine max GN=GLYMA_15G219800 PE=4 SV=2	[more]
A0A067LHT7_JATCU	1.0e-31	61.03	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05627 PE=4 SV=1	[more]

BLAST of MELO3C025709 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59990.1	2.6e-26	51.82	CCT motif family protein	[more]
AT1G63820.1	1.1e-21	49.56	CCT motif family protein	[more]
AT5G41380.1	9.6e-21	39.26	CCT motif family protein	[more]
AT3G12890.1	2.2e-17	37.76	activator of spomin::LUC2	[more]
AT2G33350.1	3.8e-17	68.42	CCT motif family protein	[more]

BLAST of MELO3C025709 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659127718\|ref\|XP_008463852.1\|	2.1e-139	100.00	PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo]	[more]
gi\|659127720\|ref\|XP_008463853.1\|	2.0e-137	99.59	PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X2 [Cucumis melo]	[more]
gi\|778714464\|ref\|XP_011657240.1\|	7.7e-121	90.32	PREDICTED: zinc finger protein CONSTANS-LIKE 5-like [Cucumis sativus]	[more]
gi\|1009177769\|ref\|XP_015870156.1\|	1.4e-37	49.56	PREDICTED: two-component response regulator-like APRR9 [Ziziphus jujuba]	[more]
gi\|502082049\|ref\|XP_004487050.1\|	1.2e-33	45.42	PREDICTED: zinc finger protein CONSTANS-LIKE 3-like [Cicer arietinum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010402	CCT_domain

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0090501	RNA phosphodiester bond hydrolysis
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0008033	tRNA processing
biological_process	GO:0008150	biological_process
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0030677	ribonuclease P complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0004526	ribonuclease P activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025709T1	MELO3C025709T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 154..194 score: 2.2
IPR010402	CCT domain	PROFILE	PS51017	CCT	coord: 153..195 score: 15
None	No IPR available	PANTHER	PTHR31319	FAMILY NOT NAMED	coord: 113..233 score: 4.9
None	No IPR available	PANTHER	PTHR31319:SF1	CCT MOTIF FAMILY PROTEIN	coord: 113..233 score: 4.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C025709	Csa6G301610	Cucumber (Chinese Long) v2	cumeB449
MELO3C025709	ClCG02G020570	Watermelon (Charleston Gray)	mewcgB114
MELO3C025709	Cla97C02G046550	Watermelon (97103) v2	mewmbB116
MELO3C025709	Bhi10G000523	Wax gourd	mewgoB128
MELO3C025709	CSPI06G16590	Wild cucumber (PI 183967)	cpimeB440
MELO3C025709	Cucsa.379690	Cucumber (Gy14) v1	cgymeB618
MELO3C025709	CmaCh20G004430	Cucurbita maxima (Rimu)	cmameB489
MELO3C025709	CmaCh02G008470	Cucurbita maxima (Rimu)	cmameB535
MELO3C025709	CmoCh02G008490	Cucurbita moschata (Rifu)	cmomeB525
MELO3C025709	CmoCh20G004800	Cucurbita moschata (Rifu)	cmomeB481
MELO3C025709	Lsi10G013310	Bottle gourd (USVL1VR-Ls)	lsimeB055
MELO3C025709	Cp4.1LG16g05760	Cucurbita pepo (Zucchini)	cpemeB256
MELO3C025709	Cp4.1LG05g08790	Cucurbita pepo (Zucchini)	cpemeB668
MELO3C025709	CsGy6G016150	Cucumber (Gy14) v2	cgybmeB385
MELO3C025709	Carg03281	Silver-seed gourd	carmeB0340
MELO3C025709	Carg20259	Silver-seed gourd	carmeB0307
MELO3C025709	CsaV3_6G022010	Cucumber (Chinese Long) v3	cucmeB451

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C025709	Watermelon (97103) v2	mewmbB086
MELO3C025709	Watermelon (97103) v2	mewmbB091
MELO3C025709	Wax gourd	mewgoB092
MELO3C025709	Melon (DHL92) v3.5.1	memeB048
MELO3C025709	Cucumber (Gy14) v1	cgymeB503
MELO3C025709	Wild cucumber (PI 183967)	cpimeB175
MELO3C025709	Cucumber (Chinese Long) v2	cumeB181
MELO3C025709	Watermelon (Charleston Gray)	mewcgB080
MELO3C025709	Watermelon (Charleston Gray)	mewcgB089
MELO3C025709	Watermelon (97103) v1	mewmB091
MELO3C025709	Watermelon (97103) v1	mewmB107
MELO3C025709	Watermelon (97103) v1	mewmB133
MELO3C025709	Cucurbita pepo (Zucchini)	cpemeB553
MELO3C025709	Bottle gourd (USVL1VR-Ls)	lsimeB241