Carg19683 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19683
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	transcription factor bHLH84-like
Location	Cucurbita_argyrosperma_scaffold_133 : 141191 .. 142616 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCTATAGGACCCATTTCAGAAAGGGAATGGATATCTCTCACTGGAGCTTACACAGCTGAGGAGTCTGATTTCATGGCTAATTTGCTCAACAACTATTGTCTTCCAAACGAGCTCAATCCCGGTTCGAGCTCGGCCGTCCCGTCTGCTTCTTCTTTGGCCATGGCACCCATGGATGAACCTTCTTACTATAGTAATCATTATTACACCTTGAATGAGAATGATTCTCACCCTCTTTGGTTGCCTAATAATGGTGCCTCTTTGTCCTTGGATTTCTCGATGGAAGATGTTCGGAATGGCGATCGATTGGACGATAGCGGTTCGAGTCGAAAAACAAGGCAATGCAGGCTGCAACAATTCCCTGCTGGAAGCTCACAGCCCGAAAAGAGAGCTGAGATCACGGTGGAAGAAGCTACGAAGGACGATAAAGTTGCACCGACACCAGTTGACACCAACTCGAGGAAACGATCCCCGAGTTCGTATAATGTAAGATTGATAATTCGAGCTCATTTGTTTCTTTGATTATAATGATATTGTCCAGTTTGAGCATAAGCTCTCGTGGGTTTGTTTTGGACTTCCCCAGAAGGCCTGGTATCAATCAAGATGTATTCCTTAAATTAGTCAATGTGGGACTCCCTCTCAACGATCCTCAACACTAATGACATTGCGCTTTGTGATTTGATAATGAAGGTGGAAAAGACGAAGATGAGTACGAGGAACACGAGGGCACGGAAGAGCTCGAAGATTGCTTCGGGTAGCTGCAATGAAGAGGAGGATCACATTGTTAGTCCAAATGGGCTGTGCACAAGCAGCTTCAGCTCAGAAGATGACTGTAATGGTGGGATCACTTCCAGCTCAAGTGGAAAGCCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCAAGGGTAACCCTCTAACCCTCTAAACCACTCCGATCGCTATTGTTAAACTCCCGAACTCCCGTTGCCATACTTGAACTCTCGAACTCTGATCTAACATGCAACTCCTTTAAATTTTCCTTCAGAAAAGGAGAGAAAGAATCAATGAAAGGTTGAGAATGTTACAAAGCCTCGTCCCGAACGGCACGAAGGTAGGCCAATCTCACACGAACATATACGATCTCGGTGTTTATCACACGATCAACAATATCTTGGTTTGTGCAGGTTGATATCAGTACAATGCTTGAAGAAGCAGTTGAGTATGTGAAGTTCTTGCAGCTTCAAATCAAGGTAATTTTTGAATGAACAAACCATTTAATTCCATAATTTTCAAGGCTTGATTTTGTGTTGAATCCAATGTTTGCAGCTGTTGAGCTCTGATGATCTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAACTTGAAGCTCATGAAACAAGACAATGCATCACAATAG

mRNA sequence

ATGGAACCTATAGGACCCATTTCAGAAAGGGAATGGATATCTCTCACTGGAGCTTACACAGCTGAGGAGTCTGATTTCATGGCTAATTTGCTCAACAACTATTGTCTTCCAAACGAGCTCAATCCCGGTTCGAGCTCGGCCGTCCCGTCTGCTTCTTCTTTGGCCATGGCACCCATGGATGAACCTTCTTACTATAGTAATCATTATTACACCTTGAATGAGAATGATTCTCACCCTCTTTGGTTGCCTAATAATGGTGCCTCTTTGTCCTTGGATTTCTCGATGGAAGATGTTCGGAATGGCGATCGATTGGACGATAGCGGTTCGAGTCGAAAAACAAGGCAATGCAGGCTGCAACAATTCCCTGCTGGAAGCTCACAGCCCGAAAAGAGAGCTGAGATCACGGTGGAAGAAGCTACGAAGGACGATAAAGTTGCACCGACACCAGTTGACACCAACTCGAGGAAACGATCCCCGAGTTCGTATAATTCAATGTGGGACTCCCTCTCAACGATCCTCAACACTAATGACATTGCGCTTTGTGATTTGATAATGAAGGTGGAAAAGACGAAGATGAGTACGAGGAACACGAGGGCACGGAAGAGCTCGAAGATTGCTTCGGGTAGCTGCAATGAAGAGGAGGATCACATTGTTAGTCCAAATGGGCTGTGCACAAGCAGCTTCAGCTCAGAAGATGACTGTAATGGTGGGATCACTTCCAGCTCAAGTGGAAAGCCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCAAGGAAAAGGAGAGAAAGAATCAATGAAAGGTTGAGAATGTTACAAAGCCTCGTCCCGAACGGCACGAAGGTTGATATCAGTACAATGCTTGAAGAAGCAGTTGAGTATGTGAAGTTCTTGCAGCTTCAAATCAAGCTGTTGAGCTCTGATGATCTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAACTTGAAGCTCATGAAACAAGACAATGCATCACAATAG

Coding sequence (CDS)

ATGGAACCTATAGGACCCATTTCAGAAAGGGAATGGATATCTCTCACTGGAGCTTACACAGCTGAGGAGTCTGATTTCATGGCTAATTTGCTCAACAACTATTGTCTTCCAAACGAGCTCAATCCCGGTTCGAGCTCGGCCGTCCCGTCTGCTTCTTCTTTGGCCATGGCACCCATGGATGAACCTTCTTACTATAGTAATCATTATTACACCTTGAATGAGAATGATTCTCACCCTCTTTGGTTGCCTAATAATGGTGCCTCTTTGTCCTTGGATTTCTCGATGGAAGATGTTCGGAATGGCGATCGATTGGACGATAGCGGTTCGAGTCGAAAAACAAGGCAATGCAGGCTGCAACAATTCCCTGCTGGAAGCTCACAGCCCGAAAAGAGAGCTGAGATCACGGTGGAAGAAGCTACGAAGGACGATAAAGTTGCACCGACACCAGTTGACACCAACTCGAGGAAACGATCCCCGAGTTCGTATAATTCAATGTGGGACTCCCTCTCAACGATCCTCAACACTAATGACATTGCGCTTTGTGATTTGATAATGAAGGTGGAAAAGACGAAGATGAGTACGAGGAACACGAGGGCACGGAAGAGCTCGAAGATTGCTTCGGGTAGCTGCAATGAAGAGGAGGATCACATTGTTAGTCCAAATGGGCTGTGCACAAGCAGCTTCAGCTCAGAAGATGACTGTAATGGTGGGATCACTTCCAGCTCAAGTGGAAAGCCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCAAGGAAAAGGAGAGAAAGAATCAATGAAAGGTTGAGAATGTTACAAAGCCTCGTCCCGAACGGCACGAAGGTTGATATCAGTACAATGCTTGAAGAAGCAGTTGAGTATGTGAAGTTCTTGCAGCTTCAAATCAAGCTGTTGAGCTCTGATGATCTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAACTTGAAGCTCATGAAACAAGACAATGCATCACAATAG

Protein sequence

MEPIGPISEREWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASSLAMAPMDEPSYYSNHYYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQFPAGSSQPEKRAEITVEEATKDDKVAPTPVDTNSRKRSPSSYNSMWDSLSTILNTNDIALCDLIMKVEKTKMSTRNTRARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSSGKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ

Homology

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BLAST of Carg19683 vs. NCBI nr
Match: XP_022922981.1 (transcription factor bHLH84-like [Cucurbita moschata])

HSP 1 Score: 581.6 bits (1498), Expect = 1.7e-162
Identity = 312/344 (90.70%), Postives = 313/344 (90.99%), Query Frame = 0


Query: 1   MEPIGPISEREWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASSLAMAPMD 60
           MEPIGPISEREWISL+GAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSA SLAMAPMD
Sbjct: 1   MEPIGPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSA-SLAMAPMD 60

Query: 61  EPSYYSNHYYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQ 120
           EPSYYSNHYYTLNENDSHP WLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQ
Sbjct: 61  EPSYYSNHYYTLNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQ 120

Query: 121 FPAGSSQPEKRAEITVEEATKDDKVAPTPVDTNSRKRSPSSYNSMWDSLSTILNTNDIAL 180
           FPAGSSQPEKRAEITVEEATKDDKVA TPVDTNSRKRSPSSYN                 
Sbjct: 121 FPAGSSQPEKRAEITVEEATKDDKVASTPVDTNSRKRSPSSYN----------------- 180

Query: 181 CDLIMKVEKTKMSTRNTRARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITS 240
                 VEKTK STRNTRARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITS
Sbjct: 181 ------VEKTKTSTRNTRARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITS 240

Query: 241 ----SSSGKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVE 300
               SSSGKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVE
Sbjct: 241 SSTLSSSGKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVE 300

Query: 301 YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 341
           YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ
Sbjct: 301 YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 320

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BLAST of Carg19683 vs. NCBI nr
Match: XP_023553185.1 (transcription factor bHLH84-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 570.1 bits (1468), Expect = 5.1e-159
Identity = 309/345 (89.57%), Postives = 309/345 (89.57%), Query Frame = 0


Query: 1   MEPIGPISEREWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASSLAMAPMD 60
           MEPIGPISEREWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSA  LAMAPMD
Sbjct: 1   MEPIGPISEREWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSA-CLAMAPMD 60

Query: 61  EPSYYSNHYYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQ 120
           EPSYYSN YYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDD GSSRKTRQCRLQQ
Sbjct: 61  EPSYYSNPYYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDDCGSSRKTRQCRLQQ 120

Query: 121 FPAGSSQPEKRAEITVEEATKDDKVAPTPVDTNSRKRSPSSYNSMWDSLSTILNTNDIAL 180
           FPAGSSQPEKRAEITVE ATKDDKVAPTPVDTNSRKRSPSSYN                 
Sbjct: 121 FPAGSSQPEKRAEITVEVATKDDKVAPTPVDTNSRKRSPSSYN----------------- 180

Query: 181 CDLIMKVEKTKMSTRNTRARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITS 240
                 VEKTK STRNTRARKSSKI S SCNEEEDHIVSPNGLCTSSFSSEDDCNGGITS
Sbjct: 181 ------VEKTKTSTRNTRARKSSKIGSASCNEEEDHIVSPNGLCTSSFSSEDDCNGGITS 240

Query: 241 ----SSSGKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVE 300
               SSSGKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVE
Sbjct: 241 SSTLSSSGKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVE 300

Query: 301 YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQD-NASQ 341
           YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQD NASQ
Sbjct: 301 YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNNASQ 321

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BLAST of Carg19683 vs. NCBI nr
Match: XP_022984818.1 (transcription factor bHLH85-like [Cucurbita maxima])

HSP 1 Score: 564.3 bits (1453), Expect = 2.8e-157
Identity = 304/344 (88.37%), Postives = 306/344 (88.95%), Query Frame = 0


Query: 1   MEPIGPISEREWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASSLAMAPMD 60
           MEPIGPISEREWISL+GAYTAEESDFMAN LNNYCLPNELNP SSSAVPSA  LAMAPMD
Sbjct: 1   MEPIGPISEREWISLSGAYTAEESDFMANFLNNYCLPNELNPSSSSAVPSA-CLAMAPMD 60

Query: 61  EPSYYSNHYYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQ 120
           EPSYY+N YYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQ
Sbjct: 61  EPSYYNNPYYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQ 120

Query: 121 FPAGSSQPEKRAEITVEEATKDDKVAPTPVDTNSRKRSPSSYNSMWDSLSTILNTNDIAL 180
           FPAGSSQPEKRAEI VEEATKDDKVAPTPVDTNSRKRS SSYN                 
Sbjct: 121 FPAGSSQPEKRAEIMVEEATKDDKVAPTPVDTNSRKRSLSSYN----------------- 180

Query: 181 CDLIMKVEKTKMSTRNTRARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITS 240
                 VEKTK STRNTRARKSSKIAS SCNEEEDHIVSPNGLCTSSFSSEDDCNGGIT 
Sbjct: 181 ------VEKTKTSTRNTRARKSSKIASASCNEEEDHIVSPNGLCTSSFSSEDDCNGGITP 240

Query: 241 ----SSSGKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVE 300
               SSSGKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVE
Sbjct: 241 SSTLSSSGKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVE 300

Query: 301 YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 341
           YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMK DNASQ
Sbjct: 301 YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKHDNASQ 320

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BLAST of Carg19683 vs. NCBI nr
Match: XP_004152375.1 (PREDICTED: transcription factor bHLH84 [Cucumis sativus] >KGN52770.1 hypothetical protein Csa_4G000890 [Cucumis sativus])

HSP 1 Score: 404.4 bits (1038), Expect = 3.7e-109
Identity = 250/369 (67.75%), Postives = 277/369 (75.07%), Query Frame = 0


Query: 5   GPISEREWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASSLAMAPMDEPSY 64
           G ISEREWISL+GAYTAEESDFMANLL+NYC+PNELN   S  +PS+     A  +EPSY
Sbjct: 3   GAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSS---YWASSNEPSY 62

Query: 65  Y------SNHYYTLNE---------NDSHP-LWLPNNGASLSLDFSMEDVRNGDRLDDSG 124
           Y      S++ Y L++         NDS+P LWLPNNGASLSLDFS+EDVRN D LDD+G
Sbjct: 63  YSSDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIEDVRNADCLDDNG 122

Query: 125 SS-RKTRQC-RLQQFPAG------SSQPEKRA-EITVEEATKDDKVAPTPVDTNSRKRSP 184
           S+ RKTRQC RLQQ PA       SSQP++RA ++ VEEA +DDKV P  V+  SRKR  
Sbjct: 123 SNIRKTRQCSRLQQSPADSVVNGKSSQPKRRANDVMVEEAMRDDKVGPVSVENFSRKRPQ 182

Query: 185 SSYNSMWDSLSTILNTNDIALCDLIMKVEKTKMSTRNTRARKSSKIASGSCNEEEDHIVS 244
           S                       ++ VEKTK   R+ RARK+SKIASGSCN EED IVS
Sbjct: 183 S-----------------------LLDVEKTK---RSGRARKTSKIASGSCN-EEDQIVS 242

Query: 245 PNGLCTSSFSSEDDC------NGGITSS--SSGKPRASRGSATDPQSLYARKRRERINER 304
           PNG CTSSFSSEDDC      NGGITSS  S+GKPRASRGSATDPQSLYARKRRERINER
Sbjct: 243 PNGQCTSSFSSEDDCNEAQENNGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINER 302

Query: 305 LRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLK 341
           LR+LQSLVPNGTKVDISTMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLK
Sbjct: 303 LRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLK 341

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BLAST of Carg19683 vs. NCBI nr
Match: XP_022149290.1 (transcription factor bHLH84-like [Momordica charantia])

HSP 1 Score: 404.1 bits (1037), Expect = 4.8e-109
Identity = 251/394 (63.71%), Postives = 276/394 (70.05%), Query Frame = 0


Query: 1   MEPIGPISEREWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVP--------SAS 60
           ME IG ISEREWISL+G YTAEESDFM NLL+NYCLPNELN G S  +P         + 
Sbjct: 1   MESIGAISEREWISLSGTYTAEESDFMVNLLSNYCLPNELNSGLSLEIPPSYWAANEPSP 60

Query: 61  SLAMAPMDEPSYYS----------------NHYYTLNENDSHPLWLPNNGASLSLDFSME 120
           +LAMA M+EPSYYS                N+ Y+L  NDSHPLW P NGASLSLDFSME
Sbjct: 61  ALAMAAMEEPSYYSSDASDSSNIYGLPQGNNNPYSL--NDSHPLWFP-NGASLSLDFSME 120

Query: 121 DVRNGD--RL-DDSGSSRKTRQCRLQQFPAG----------SSQPEKRAEITVEEATKDD 180
           DV N D  RL DD+GSS+KTRQCRLQQ P            SSQP++R E+T EEA +DD
Sbjct: 121 DVGNDDSARLDDDNGSSQKTRQCRLQQSPTNSAVAAAINGKSSQPKRRTEVTAEEAMRDD 180

Query: 181 KVAPT-PVDTNSRKRSPSSYNSMWDSLSTILNTNDIALCDLIMKVEKTKMSTRNTRARKS 240
           +VAPT  +D N +KRSPS                       +  VEKTK   R+ R+RKS
Sbjct: 181 EVAPTISIDDNPKKRSPS-----------------------LPDVEKTK---RSVRSRKS 240

Query: 241 SKIASGSCNEEEDHIVSPNGLCTSSFSSEDDCNG------GITSS----------SSGKP 300
            K+ASGS   EEDHIVSPNG  TSSFSSEDDCN       G+TSS          S+GKP
Sbjct: 241 PKLASGSSCNEEDHIVSPNGQSTSSFSSEDDCNEPQEINCGVTSSTNSKGSASLTSNGKP 300

Query: 301 RASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQIK 341
           RASRGSATDPQSLYARKRRERINERLR+LQSLVPNGTKVDISTMLEEAV+YVKFLQLQIK
Sbjct: 301 RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIK 360

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BLAST of Carg19683 vs. TAIR10
Match: AT4G33880.1 (ROOT HAIR DEFECTIVE 6-LIKE 2)

HSP 1 Score: 155.6 bits (392), Expect = 5.4e-38
Identity = 79/87 (90.80%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 243 SGKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQ 302
           +GK RASRG+ATDPQSLYARKRRERINERLR+LQ+LVPNGTKVDISTMLEEAV YVKFLQ
Sbjct: 263 NGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQ 322

Query: 303 LQIKLLSSDDLWMYAPIAYNGMDIGLN 330
           LQIKLLSSDDLWMYAPIA+NGMDIGL+
Sbjct: 323 LQIKLLSSDDLWMYAPIAFNGMDIGLS 349

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BLAST of Carg19683 vs. TAIR10
Match: AT2G14760.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 151.8 bits (382), Expect = 7.8e-37
Identity = 131/352 (37.22%), Postives = 167/352 (47.44%), Query Frame = 0


Query: 11  EWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASSLA-----------MAPM 70
           EW +  G    EE+DFM  LL +Y    E   G SS+  +A+  A               
Sbjct: 6   EWSTGLGGIYTEEADFMNQLLASY----EQPCGGSSSETTATLTAYHHQGSQWNGGFCFS 65

Query: 71  DEPSYYSNHYYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQ 130
            E S YS +   +   +     + +   + +L    E+    D  + SG S    +   +
Sbjct: 66  QESSSYSGYCAAMPRQEEDNNGMEDATINTNLYLVGEETSECDATEYSGKSLLPLETVAE 125

Query: 131 QFPAGSSQPEKRAEITVEE------ATKDDKVAPTPVDTNSRKRSPSSYNSMWDSLSTIL 190
                  QPE     T +E       +   +   T  D N R           +      
Sbjct: 126 NHDHSMLQPENSLTTTTDEKMFNQCESSKKRTRATTTDKNKRANKARRSQKCVEMSGENE 185

Query: 191 NTNDIALCDLIMKVEKTKMSTRNTRARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDD 250
           N+ +          E+        R  K  K     C+++E      NG    +F S++D
Sbjct: 186 NSGE----------EEYTEKAAGKRKTKPLKPQKTCCSDDES-----NG--GDTFLSKED 245

Query: 251 CNGGITSSSSGKPRASRGSATDPQSLYAR-------------KRRERINERLRMLQSLVP 310
                  + +GK RASRG+ATDPQSLYAR             KRRERINERLR+LQ LVP
Sbjct: 246 GEDSKALNLNGKTRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVP 305

Query: 311 NGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKL 333
           NGTKVDISTMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGL+LKL
Sbjct: 306 NGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLDLKL 336

[Close]

BLAST of Carg19683 vs. TAIR10
Match: AT1G27740.1 (root hair defective 6-like 4)

HSP 1 Score: 149.4 bits (376), Expect = 3.9e-36
Identity = 82/138 (59.42%), Postives = 105/138 (76.09%), Query Frame = 0


Query: 198 RARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSSGKPRASRGSATDPQ 257
           +++K  +++S S   +E    + N +   S S+  D      +S  GK RA++G+ATDPQ
Sbjct: 122 KSKKKQRVSSESNTVDES---NTNWVDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQ 181

Query: 258 SLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYA 317
           SLYARKRRE+INERL+ LQ+LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSDDLWMYA
Sbjct: 182 SLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYA 241

Query: 318 PIAYNGMDIGLNLKLMKQ 336
           P+AYNG+D+G +  L+ +
Sbjct: 242 PLAYNGLDMGFHHNLLSR 256

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BLAST of Carg19683 vs. TAIR10
Match: AT5G43175.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-34
Identity = 91/172 (52.91%), Postives = 119/172 (69.19%), Query Frame = 0


Query: 171 TILNTNDIALCDLIMKVEKTKMSTRN--TRARKSSKIASGSCNEEEDHIVSPNGLCTSSF 230
           TIL +N  A+ D         + +R    + RK  K++S S    E      +G   SS+
Sbjct: 50  TILQSNYAAVLDGSNHQTNRNVDSRQDLLKPRKKQKLSSESNLVTEPKTAWRDGQSLSSY 109

Query: 231 SSEDDCNG-GITSSSS----GKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGT 290
           +S DD    G+ S++S     K +A+RG A+DPQSLYARKRRERIN+RL+ LQSLVPNGT
Sbjct: 110 NSSDDEKALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGT 169

Query: 291 KVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQ 336
           KVDISTMLE+AV YVKFLQLQIKLLSS+DLWMYAP+A+NG+++GL+  L+ +
Sbjct: 170 KVDISTMLEDAVHYVKFLQLQIKLLSSEDLWMYAPLAHNGLNMGLHHNLLSR 221

[Close]

BLAST of Carg19683 vs. TAIR10
Match: AT5G37800.1 (RHD SIX-LIKE 1)

HSP 1 Score: 90.1 bits (222), Expect = 2.8e-18
Identity = 45/70 (64.29%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 245 KPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQ 304
           KP+A+  S  DPQSL A+ RRERI+ERL++LQ LVPNGTKVD+ TMLE+A+ YVKFLQ+Q
Sbjct: 201 KPKATT-SPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQ 260

Query: 305 IKLLSSDDLW 315
           +K+L++D+ W
Sbjct: 261 VKVLAADEFW 269

[Close]

BLAST of Carg19683 vs. Swiss-Prot
Match: sp|Q7XHI9|BH084_ARATH (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.3e-38
Identity = 131/339 (38.64%), Postives = 167/339 (49.26%), Query Frame = 0


Query: 11  EWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASSLA-----------MAPM 70
           EW +  G    EE+DFM  LL +Y    E   G SS+  +A+  A               
Sbjct: 6   EWSTGLGGIYTEEADFMNQLLASY----EQPCGGSSSETTATLTAYHHQGSQWNGGFCFS 65

Query: 71  DEPSYYSNHYYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQ 130
            E S YS +   +   +     + +   + +L    E+    D  + SG S    +   +
Sbjct: 66  QESSSYSGYCAAMPRQEEDNNGMEDATINTNLYLVGEETSECDATEYSGKSLLPLETVAE 125

Query: 131 QFPAGSSQPEKRAEITVEE------ATKDDKVAPTPVDTNSRKRSPSSYNSMWDSLSTIL 190
                  QPE     T +E       +   +   T  D N R           +      
Sbjct: 126 NHDHSMLQPENSLTTTTDEKMFNQCESSKKRTRATTTDKNKRANKARRSQKCVEMSGENE 185

Query: 191 NTNDIALCDLIMKVEKTKMSTRNTRARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDD 250
           N+ +          E+        R  K  K     C+++E      NG    +F S++D
Sbjct: 186 NSGE----------EEYTEKAAGKRKTKPLKPQKTCCSDDES-----NG--GDTFLSKED 245

Query: 251 CNGGITSSSSGKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEE 310
                  + +GK RASRG+ATDPQSLYARKRRERINERLR+LQ LVPNGTKVDISTMLEE
Sbjct: 246 GEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEE 305

Query: 311 AVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKL 333
           AV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGL+LKL
Sbjct: 306 AVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLDLKL 323

[Close]

BLAST of Carg19683 vs. Swiss-Prot
Match: sp|Q84WK0|BH085_ARATH (Transcription factor bHLH85 OS=Arabidopsis thaliana OX=3702 GN=BHLH85 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 9.8e-37
Identity = 79/87 (90.80%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 243 SGKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQ 302
           +GK RASRG+ATDPQSLYARKRRERINERLR+LQ+LVPNGTKVDISTMLEEAV YVKFLQ
Sbjct: 263 NGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQ 322

Query: 303 LQIKLLSSDDLWMYAPIAYNGMDIGLN 330
           LQIKLLSSDDLWMYAPIA+NGMDIGL+
Sbjct: 323 LQIKLLSSDDLWMYAPIAFNGMDIGLS 349

[Close]

BLAST of Carg19683 vs. Swiss-Prot
Match: sp|Q8LEG1|BH054_ARATH (Transcription factor bHLH54 OS=Arabidopsis thaliana OX=3702 GN=BHLH54 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 7.0e-35
Identity = 82/138 (59.42%), Postives = 105/138 (76.09%), Query Frame = 0


Query: 198 RARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSSGKPRASRGSATDPQ 257
           +++K  +++S S   +E    + N +   S S+  D      +S  GK RA++G+ATDPQ
Sbjct: 122 KSKKKQRVSSESNTVDES---NTNWVDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQ 181

Query: 258 SLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYA 317
           SLYARKRRE+INERL+ LQ+LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSDDLWMYA
Sbjct: 182 SLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYA 241

Query: 318 PIAYNGMDIGLNLKLMKQ 336
           P+AYNG+D+G +  L+ +
Sbjct: 242 PLAYNGLDMGFHHNLLSR 256

[Close]

BLAST of Carg19683 vs. Swiss-Prot
Match: sp|Q3E7L7|BH139_ARATH (Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.3e-33
Identity = 91/172 (52.91%), Postives = 119/172 (69.19%), Query Frame = 0


Query: 171 TILNTNDIALCDLIMKVEKTKMSTRN--TRARKSSKIASGSCNEEEDHIVSPNGLCTSSF 230
           TIL +N  A+ D         + +R    + RK  K++S S    E      +G   SS+
Sbjct: 50  TILQSNYAAVLDGSNHQTNRNVDSRQDLLKPRKKQKLSSESNLVTEPKTAWRDGQSLSSY 109

Query: 231 SSEDDCNG-GITSSSS----GKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGT 290
           +S DD    G+ S++S     K +A+RG A+DPQSLYARKRRERIN+RL+ LQSLVPNGT
Sbjct: 110 NSSDDEKALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGT 169

Query: 291 KVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQ 336
           KVDISTMLE+AV YVKFLQLQIKLLSS+DLWMYAP+A+NG+++GL+  L+ +
Sbjct: 170 KVDISTMLEDAVHYVKFLQLQIKLLSSEDLWMYAPLAHNGLNMGLHHNLLSR 221

[Close]

BLAST of Carg19683 vs. Swiss-Prot
Match: sp|Q9FJ00|BH086_ARATH (Putative transcription factor bHLH086 OS=Arabidopsis thaliana OX=3702 GN=BHLH86 PE=3 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 5.1e-17
Identity = 45/70 (64.29%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 245 KPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQ 304
           KP+A+  S  DPQSL A+ RRERI+ERL++LQ LVPNGTKVD+ TMLE+A+ YVKFLQ+Q
Sbjct: 201 KPKATT-SPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQ 260

Query: 305 IKLLSSDDLW 315
           +K+L++D+ W
Sbjct: 261 VKVLAADEFW 269

[Close]

BLAST of Carg19683 vs. TrEMBL
Match: tr|A0A0A0KT10|A0A0A0KT10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000890 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.4e-109
Identity = 250/369 (67.75%), Postives = 277/369 (75.07%), Query Frame = 0


Query: 5   GPISEREWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASSLAMAPMDEPSY 64
           G ISEREWISL+GAYTAEESDFMANLL+NYC+PNELN   S  +PS+     A  +EPSY
Sbjct: 3   GAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSS---YWASSNEPSY 62

Query: 65  Y------SNHYYTLNE---------NDSHP-LWLPNNGASLSLDFSMEDVRNGDRLDDSG 124
           Y      S++ Y L++         NDS+P LWLPNNGASLSLDFS+EDVRN D LDD+G
Sbjct: 63  YSSDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIEDVRNADCLDDNG 122

Query: 125 SS-RKTRQC-RLQQFPAG------SSQPEKRA-EITVEEATKDDKVAPTPVDTNSRKRSP 184
           S+ RKTRQC RLQQ PA       SSQP++RA ++ VEEA +DDKV P  V+  SRKR  
Sbjct: 123 SNIRKTRQCSRLQQSPADSVVNGKSSQPKRRANDVMVEEAMRDDKVGPVSVENFSRKRPQ 182

Query: 185 SSYNSMWDSLSTILNTNDIALCDLIMKVEKTKMSTRNTRARKSSKIASGSCNEEEDHIVS 244
           S                       ++ VEKTK   R+ RARK+SKIASGSCN EED IVS
Sbjct: 183 S-----------------------LLDVEKTK---RSGRARKTSKIASGSCN-EEDQIVS 242

Query: 245 PNGLCTSSFSSEDDC------NGGITSS--SSGKPRASRGSATDPQSLYARKRRERINER 304
           PNG CTSSFSSEDDC      NGGITSS  S+GKPRASRGSATDPQSLYARKRRERINER
Sbjct: 243 PNGQCTSSFSSEDDCNEAQENNGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINER 302

Query: 305 LRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLK 341
           LR+LQSLVPNGTKVDISTMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLK
Sbjct: 303 LRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLK 341

[Close]

BLAST of Carg19683 vs. TrEMBL
Match: tr|A0A1S3BZ99|A0A1S3BZ99_CUCME (transcription factor bHLH84-like OS=Cucumis melo OX=3656 GN=LOC103494806 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 3.0e-107
Identity = 246/369 (66.67%), Postives = 275/369 (74.53%), Query Frame = 0


Query: 5   GPISEREWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASSLAMAPMDEPSY 64
           G ISEREWISL+GAYTAEESDFMANLLNNYC+PNELN   +  +PS+     A  +EPSY
Sbjct: 4   GAISEREWISLSGAYTAEESDFMANLLNNYCIPNELNSDLTLEIPSS---YWASSNEPSY 63

Query: 65  Y------SNHYYTLNE---------NDSHPLWLPNNGA-SLSLDFSMEDVRNGDRLDDSG 124
           Y      S++ Y L++         N+S+PLW+PNNGA SLSLDFS+EDV N D LDD+G
Sbjct: 64  YSSDASDSSNIYALSQPNNNLPYTFNESNPLWMPNNGASSLSLDFSVEDVGNADCLDDNG 123

Query: 125 SS-RKTRQC-RLQQFPAG------SSQPEKRAE-ITVEEATKDDKVAPTPVDTNSRKRSP 184
           S+ RKTRQC RLQQ PA       SSQ ++RA+ + VEEA +DDKV P  V+  SRKR  
Sbjct: 124 SNIRKTRQCSRLQQSPADSVVNGKSSQQKRRADGVMVEEAMRDDKVGPVSVENASRKRPQ 183

Query: 185 SSYNSMWDSLSTILNTNDIALCDLIMKVEKTKMSTRNTRARKSSKIASGSCNEEEDHIVS 244
           S                       ++ VEKTK   R+ RARK+SKIASGSCN EED IVS
Sbjct: 184 S-----------------------LLDVEKTK---RSGRARKTSKIASGSCN-EEDQIVS 243

Query: 245 PNGLCTSSFSSEDDC------NGGITSS--SSGKPRASRGSATDPQSLYARKRRERINER 304
           PNG CTSSFSSEDDC      NGGITSS  S+GKPRASRGSATDPQSLYARKRRERINER
Sbjct: 244 PNGQCTSSFSSEDDCNEAQEINGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINER 303

Query: 305 LRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLK 341
           LR+LQSLVPNGTKVDISTMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLK
Sbjct: 304 LRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLK 342

[Close]

BLAST of Carg19683 vs. TrEMBL
Match: tr|A0A2C9V4L6|A0A2C9V4L6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G083200 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 6.1e-52
Identity = 169/380 (44.47%), Postives = 207/380 (54.47%), Query Frame = 0


Query: 1   MEPIGPISEREWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASSLAMAPMD 60
           MEPIG   E EW SL+G Y +EE+ F+A LL N    +     SS      S + MA ++
Sbjct: 1   MEPIGVSLEGEWSSLSGMYRSEEAVFLAQLLGNNDSSSCFGVPSSFWSSHDSEMNMAAVN 60

Query: 61  EPSYYSNHY------------------------YTLNENDSHPLWLPNNGASLSLDFSME 120
           E S  +N Y                        Y L  NDSH + + NN +S+S+DF + 
Sbjct: 61  EDSVDTNFYNFSQGSSCYSGGSNFLFATSSQESYFL--NDSHAVLVSNN-SSMSMDFCVG 120

Query: 121 DVRN--------GDRLDDSGSSRKTRQCRLQQFPAGSSQPEKRAEITVEEATKDDKVAPT 180
           DV N         D L+   S+    +    Q P  +  P+K+  +  E+ T+D    P 
Sbjct: 121 DVINTVSYLVEGDDCLNQEISNGNVEEYGGNQQPEAADFPDKQEMLVPEQLTEDKSGKPP 180

Query: 181 PVDTNSRKRSPSSYNSMWDSLSTILNTNDIALCDLIMKVEKTKMSTRNTRARKSSKIASG 240
            +   S+KRS               N  D          +K K   RN R++KS K+ASG
Sbjct: 181 EI---SKKRS--------------RNAGD---------AQKNK---RNARSKKSQKLASG 240

Query: 241 SCNEEEDHIVSPNGLCTSSFSSEDD------CNGGITSSSS----------GKPRASRGS 300
           + N EE +    N   TSS  SEDD       NGG  SS S          G+ RASRG+
Sbjct: 241 NNNAEECN-AGVNVPATSSCCSEDDSNGSHELNGGANSSLSLKGTPALNLNGRTRASRGA 300

Query: 301 ATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDD 333
           ATDPQSLYARKRRERINERL++LQ+LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSDD
Sbjct: 301 ATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDD 347

[Close]

BLAST of Carg19683 vs. TrEMBL
Match: tr|A0A2I4DFS0|A0A2I4DFS0_9ROSI (transcription factor bHLH84-like OS=Juglans regia OX=51240 GN=LOC108979729 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 3.7e-49
Identity = 168/394 (42.64%), Postives = 201/394 (51.02%), Query Frame = 0


Query: 1   MEPIGPI-SEREWISLTGAYTAEESDFMANLLNNYC-LPNELNPGSSSAVPSA------S 60
           MEP+G I SE EW SL+G YTAEE+DFMA LLNN   LPNEL   SS  VPS       S
Sbjct: 1   MEPMGAISSEGEWGSLSGMYTAEEADFMAQLLNNNALLPNELIGDSSLGVPSTFWPGHES 60

Query: 61  SLAMAPMDEPSYYSNHYYTLNEN------------------------DSHPLWLPNNGAS 120
           S+ +  + E  Y +   Y  N N                        DSHP+ L +N +S
Sbjct: 61  SMNVEGLSESPYCT--LYMANSNLCSFSNGSSYNGTGSLRQQSYYLSDSHPV-LASNDSS 120

Query: 121 LSLDFSMEDVRN--------GDRLDDSGSSRKTRQCRLQQFPA------GSSQPEKRAEI 180
           +S+DF M  V+N         D L+   S     +      PA      GS   ++  E+
Sbjct: 121 MSMDFGMMGVKNTGSFLIEGDDCLNQENSDGNAEEYAGNYKPAAVLPQNGSLHRKEPQEM 180

Query: 181 TVEEATKDDKVAPTPVDTNSRKRSPSSYNSMWDSLSTILNTNDIALCDLIMKVEKTKMST 240
            + E+  + K    P D NS+KRS                           +        
Sbjct: 181 PLPESIPEGKYNNAP-DINSKKRS---------------------------RTTGXXXXX 240

Query: 241 RNTRARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDC------NGGITSSSS----- 300
                                      G  +SS+SSEDDC      NGG++S  S     
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXDLIGQSSSSWSSEDDCNVSHELNGGLSSHLSKKDPA 300

Query: 301 -----GKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYV 333
                G+ RASRGSATDPQSLYARKRRERINERLR+LQ+LVPNGTKVDISTMLEEAV+YV
Sbjct: 301 SSILNGRTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYV 360

[Close]

BLAST of Carg19683 vs. TrEMBL
Match: tr|A0A2I4DFS3|A0A2I4DFS3_9ROSI (transcription factor bHLH54-like OS=Juglans regia OX=51240 GN=LOC108979728 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 2.1e-44
Identity = 150/360 (41.67%), Postives = 190/360 (52.78%), Query Frame = 0


Query: 1   MEPIGPISEREWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSA------SSL 60
           ME IG ISE EW+SL+  +TAEE+DFM   L+   +PNE+N  SS  VP        S++
Sbjct: 1   MEQIGVISEGEWVSLSAMHTAEEADFMVQWLDKPSIPNEINTCSSLGVPFTFWPFYDSTM 60

Query: 61  AMAPMDEPS-----YYSNHYYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDDSGS 120
            MA + E S     + S  +Y+L      PL    +G SLS        +  D L D   
Sbjct: 61  NMAGLTESSCISLEFPSTRFYSL------PLESSYSGGSLS--------QKSDYLSD--- 120

Query: 121 SRKTRQCRLQQFPAGSSQPEKRAEITVEEATKDDKVAPTPVDTNSRKRSPSSYNSMWDSL 180
                             P+     T    + D    P  +D +             +S 
Sbjct: 121 ------------------PQPILTSTYNFMSMDS--VPYLIDGDDCSNQEMVKGDAEESA 180

Query: 181 STILNTNDIALCDLIMKVEKTKMSTRNTRARKSSK--IASGSCNEEEDHIVSPNGLCTSS 240
             +  T D++          +    RN R  +S K  + S + N E+   +  +G  +SS
Sbjct: 181 GNMPETKDLS----------SGYVNRNKRIAQSKKSHMLSLTSNREKGGCLCLDGQSSSS 240

Query: 241 FSSEDDCN-----GGITSSSS----------GKPRASRGSATDPQSLYARKRRERINERL 300
            SSEDD N      G+T S S          GK RA+RGSA+DPQS+YARKRRERIN RL
Sbjct: 241 CSSEDDSNTSQELNGVTPSLSSKELPALNKKGKARATRGSASDPQSVYARKRRERINGRL 300

Query: 301 RMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKL 333
           R+LQ+LVPNGTKVDISTMLEE VEYVKFLQLQIKLLSSDDLWMYAP AYNG+DIGL+LK+
Sbjct: 301 RILQNLVPNGTKVDISTMLEEGVEYVKFLQLQIKLLSSDDLWMYAPFAYNGVDIGLDLKI 313

The following BLAST results are available for this feature:

BLAST of Carg19683 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922981.1	1.7e-162	90.70	transcription factor bHLH84-like [Cucurbita moschata]	[more]
XP_023553185.1	5.1e-159	89.57	transcription factor bHLH84-like [Cucurbita pepo subsp. pepo]	[more]
XP_022984818.1	2.8e-157	88.37	transcription factor bHLH85-like [Cucurbita maxima]	[more]
XP_004152375.1	3.7e-109	67.75	PREDICTED: transcription factor bHLH84 [Cucumis sativus] >KGN52770.1 hypothetica...	[more]
XP_022149290.1	4.8e-109	63.71	transcription factor bHLH84-like [Momordica charantia]	[more]

BLAST of Carg19683 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33880.1	5.4e-38	90.80	ROOT HAIR DEFECTIVE 6-LIKE 2	[more]
AT2G14760.3	7.8e-37	37.22	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G27740.1	3.9e-36	59.42	root hair defective 6-like 4	[more]
AT5G43175.1	1.3e-34	52.91	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G37800.1	2.8e-18	64.29	RHD SIX-LIKE 1	[more]

BLAST of Carg19683 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7XHI9\|BH084_ARATH	2.3e-38	38.64	Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1	[more]
sp\|Q84WK0\|BH085_ARATH	9.8e-37	90.80	Transcription factor bHLH85 OS=Arabidopsis thaliana OX=3702 GN=BHLH85 PE=2 SV=1	[more]
sp\|Q8LEG1\|BH054_ARATH	7.0e-35	59.42	Transcription factor bHLH54 OS=Arabidopsis thaliana OX=3702 GN=BHLH54 PE=2 SV=1	[more]
sp\|Q3E7L7\|BH139_ARATH	2.3e-33	52.91	Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=...	[more]
sp\|Q9FJ00\|BH086_ARATH	5.1e-17	64.29	Putative transcription factor bHLH086 OS=Arabidopsis thaliana OX=3702 GN=BHLH86 ...	[more]

BLAST of Carg19683 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KT10\|A0A0A0KT10_CUCSA	2.4e-109	67.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000890 PE=4 SV=1	[more]
tr\|A0A1S3BZ99\|A0A1S3BZ99_CUCME	3.0e-107	66.67	transcription factor bHLH84-like OS=Cucumis melo OX=3656 GN=LOC103494806 PE=4 SV...	[more]
tr\|A0A2C9V4L6\|A0A2C9V4L6_MANES	6.1e-52	44.47	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G083200 PE=4 SV=...	[more]
tr\|A0A2I4DFS0\|A0A2I4DFS0_9ROSI	3.7e-49	42.64	transcription factor bHLH84-like OS=Juglans regia OX=51240 GN=LOC108979729 PE=4 ...	[more]
tr\|A0A2I4DFS3\|A0A2I4DFS3_9ROSI	2.1e-44	41.67	transcription factor bHLH54-like OS=Juglans regia OX=51240 GN=LOC108979728 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036638	HLH_DNA-bd_sf
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19683-RA	Carg19683-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 258..307 e-value: 6.7E-12 score: 55.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 262..302 e-value: 2.9E-8 score: 33.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 252..301 score: 15.44
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	CDD	cd00083	HLH	coord: 261..306 e-value: 9.95548E-12 score: 58.7647
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	G3DSA:4.10.280.10		coord: 254..310 e-value: 8.2E-12 score: 46.7
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 252..317
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..256
None	No IPR available	PANTHER	PTHR16223	FAMILY NOT NAMED	coord: 1..333
None	No IPR available	PANTHER	PTHR16223:SF105	TRANSCRIPTION FACTOR BHLH84-RELATED	coord: 1..333

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19683	Cla006419	Watermelon (97103) v1	carwmB0287
Carg19683	Cla016091	Watermelon (97103) v1	carwmB0289
Carg19683	Csa4G000890	Cucumber (Chinese Long) v2	carcuB0322
Carg19683	Csa7G071410	Cucumber (Chinese Long) v2	carcuB0323
Carg19683	MELO3C017996	Melon (DHL92) v3.5.1	carmeB0297
Carg19683	MELO3C018516	Melon (DHL92) v3.5.1	carmeB0295
Carg19683	ClCG10G010480	Watermelon (Charleston Gray)	carwcgB0287
Carg19683	ClCG02G006780	Watermelon (Charleston Gray)	carwcgB0288
Carg19683	CSPI04G00430	Wild cucumber (PI 183967)	carcpiB0328
Carg19683	CSPI07G06880	Wild cucumber (PI 183967)	carcpiB0329
Carg19683	Cucsa.097490	Cucumber (Gy14) v1	carcgyB0343
Carg19683	Cucsa.219180	Cucumber (Gy14) v1	carcgyB0344
Carg19683	Cucsa.352750	Cucumber (Gy14) v1	carcgyB0348
Carg19683	CmaCh04G004510	Cucurbita maxima (Rimu)	carcmaB0408
Carg19683	CmaCh19G005540	Cucurbita maxima (Rimu)	carcmaB0407
Carg19683	CmaCh16G003240	Cucurbita maxima (Rimu)	carcmaB0406
Carg19683	CmaCh11G017010	Cucurbita maxima (Rimu)	carcmaB0405
Carg19683	CmoCh16G003420	Cucurbita moschata (Rifu)	carcmoB0402
Carg19683	CmoCh11G014190	Cucurbita moschata (Rifu)	carcmoB0401
Carg19683	CmoCh04G004830	Cucurbita moschata (Rifu)	carcmoB0403
Carg19683	Lsi03G005730	Bottle gourd (USVL1VR-Ls)	carlsiB267
Carg19683	Lsi03G010260	Bottle gourd (USVL1VR-Ls)	carlsiB269
Carg19683	Cp4.1LG04g07620	Cucurbita pepo (Zucchini)	carcpeB0409
Carg19683	Cp4.1LG01g02530	Cucurbita pepo (Zucchini)	carcpeB0408
Carg19683	Cp4.1LG14g04550	Cucurbita pepo (Zucchini)	carcpeB0407
Carg19683	CsGy4G000380	Cucumber (Gy14) v2	carcgybB0309
Carg19683	MELO3C017996.2	Melon (DHL92) v3.6.1	carmedB0308
Carg19683	MELO3C018516.2	Melon (DHL92) v3.6.1	carmedB0306
Carg19683	CsaV3_7G007860	Cucumber (Chinese Long) v3	carcucB0329
Carg19683	CsaV3_4G000380	Cucumber (Chinese Long) v3	carcucB0328
Carg19683	Cla97C10G193380	Watermelon (97103) v2	carwmbB0302
Carg19683	Cla97C02G033780	Watermelon (97103) v2	carwmbB0303
Carg19683	Cla97C05G102260	Watermelon (97103) v2	carwmbB0305
Carg19683	Bhi11G000956	Wax gourd	carwgoB0381
Carg19683	Bhi09G002669	Wax gourd	carwgoB0383

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19683	Carg08121	Silver-seed gourd	carcarB324

The following block(s) are covering this gene:

None